ID:dsi_30036 |
Coordinate:3l:11631676-11631825 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
CDS [3l_11631826_11632210_+]; exon [3l_11631826_11632210_+]; intron [3l_11631502_11631825_+]
No Repeatable elements found
| --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## CGGAAATTTAATTAAAAAGTACCTAGTGTTGCTCTTAAGTTTTTGCCTATTAAAAGTTGTGAGCTCCTTGCTTTTGAAATAATCTAAGAACCGTGACAGTTTTCAATGCACTTAACAATTCACCATTAAAGTAAAAAATGTAGAAGATAGGTTGTTGATTGTGTCAAGTTTCAATGTTACTCATAAATTTAATTTTCTAGCCTCTCATAACTCTCCGTCTCCGACGAACGGATCCCCGAGCTATACGACC **************************************************......(((.(((...........(((..((((....((((..(((((....((((((.(((((....(((..((((.........))))..)))..)))))))))))...))))).))))....)))).)))...........))))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M025 embryo |
M023 head |
SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................................................................TAACTCTCCGTCTCCGAC......................... | 18 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................................................................TGTTGATTGTGTCAGGCT................................................................................ | 18 | 2 | 6 | 0.17 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................................................................................................AAGATAGGTGGTTGA............................................................................................ | 15 | 1 | 8 | 0.13 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ................................................................................................................................................................................................................AACCCTCCGTCTCCG........................... | 15 | 1 | 9 | 0.11 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ......................................................................................................TCAATGCACGTAACA..................................................................................................................................... | 15 | 1 | 16 | 0.06 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .......................TACTGTTGCTCTTAA.................................................................................................................................................................................................................... | 15 | 1 | 18 | 0.06 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
|
GCCTTTAAATTAATTTTTCATGGATCACAACGAGAATTCAAAAACGGATAATTTTCAACACTCGAGGAACGAAAACTTTATTAGATTCTTGGCACTGTCAAAAGTTACGTGAATTGTTAAGTGGTAATTTCATTTTTTACATCTTCTATCCAACAACTAACACAGTTCAAAGTTACAATGAGTATTTAAATTAAAAGATCGGAGAGTATTGAGAGGCAGAGGCTGCTTGCCTAGGGGCTCGATATGCTGG
**************************************************......(((.(((...........(((..((((....((((..(((((....((((((.(((((....(((..((((.........))))..)))..)))))))))))...))))).))))....)))).)))...........))))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
M024 male body |
SRR553488 RT_0-2 hours eggs |
M023 head |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................TTACTTGAAGTGTTAAGTG............................................................................................................................... | 19 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 | 0 |
| ....................................................................................................................................................................................AGTATTTAAATTAAA....................................................... | 15 | 0 | 10 | 0.10 | 1 | 0 | 0 | 1 | 0 | 0 |
| ......................................................................................................................................................................................................................GGCGGAGGCTGATTGCCTT................. | 19 | 3 | 15 | 0.07 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...........................................................................CTGTATTTGATTCTAGGCA............................................................................................................................................................ | 19 | 3 | 15 | 0.07 | 1 | 0 | 1 | 0 | 0 | 0 |
| ....................................................................................................................................................................................AGTATTTCTATTAAAAGATG.................................................. | 20 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 |
| ...................................................................................................................................................................AGTTCAAAGTTACCGTG...................................................................... | 17 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
Generated: 04/24/2015 at 10:31 AM