ID:

dsi_29865

Coordinate:

x:453114-453182 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CTTTCCGCTTCGCCGAAAATAGTGGAACGCCGTGGCATTGTGGGCCTGGGGTAAGTAGTAATGCGGATTGTAGTGCTCCGACTCGGGGAATTAAACGCATTCCATTTTCTTTCGTACAGACATCGTAGTGGACAACTGCGCCATCTGCCGAAACCACATCATGGACTTG
**************************************************.........((((((.....((((.(((((...))))).))))..))))))..................**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
M024
male body
GSM343915
embryo
SRR553485
Chicharo_3 day-old ovaries
SRR902008
ovaries
M025
embryo
M053
female body
SRR553487
NRT_0-2 hours eggs
SRR902009
testis
M023
head
SRR618934
dsim w501 ovaries
SRR553488
RT_0-2 hours eggs
..................GAAGTGGAACGCCGCGGCATTGTG............................................................................................................................... 24 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............................CCCGTGGTATTGTGGGCC........................................................................................................................... 18 2 2 1.00 2 0 1 0 0 0 0 0 0 0 1 0 0
..........................ACGCCGTGGCATTGTGGGCCTGG........................................................................................................................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................TGCGCCATCTGCCGAAACCACATCAT....... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................CGTACAGACATCGTAGTGG...................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................TGGGACATCGTAGTGGACAACTGCGCC........................... 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................GGTAGTAATGCGGATTGTAGT............................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................TGGAACGCCGTGGCATTGTGGGCCTG......................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................GTGGAACGCCGTGGCATTGTG............................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................CTGCCGAAACCACATCATGGACTTG 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGGGACATCGTAGTGGACAACTGC.............................. 24 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
....................AGTGGAACGCCGTGGCATTGTGG.............................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................AATAGTGGAACGCCGTGGCATT.................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...............................GTGGCATTGTGGGCCTGGTA...................................................................................................................... 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................AGAAGTGGAACGCCGTGGCATTGT................................................................................................................................ 24 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...........GCCGAAAATAGTGGAACGCC.......................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................AACGCCGTGGCATTGTGGGCCTG......................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................TTGGACATCGTAGTGGACAACTGCGCC........................... 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................ACGCCGTGGCATTGTGGGCCT.......................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................ACGCCGTGGCATTGTGGGCCTGGG....................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.........TCGCCGAAAATAGTGGAACGC........................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
......................TGGAACGCCGTGGCAG................................................................................................................................... 16 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0
..............................................TGGGGGAATTAGTATTGCGG....................................................................................................... 20 3 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
................AAGAAGTGGAACGCCGTG....................................................................................................................................... 18 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
.................GACAGTGGAACCCCGTGG...................................................................................................................................... 18 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
...................TAGTGGAACGCTCTGG...................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GAAAGGCGAAGCGGCTTTTATCACCTTGCGGCACCGTAACACCCGGACCCCATTCATCATTACGCCTAACATCACGAGGCTGAGCCCCTTAATTTGCGTAAGGTAAAAGAAAGCATGTCTGTAGCATCACCTGTTGACGCGGTAGACGGCTTTGGTGTAGTACCTGAAC
**************************************************.........((((((.....((((.(((((...))))).))))..))))))..................**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
M025
embryo
SRR553487
NRT_0-2 hours eggs
SRR553485
Chicharo_3 day-old ovaries
SRR553488
RT_0-2 hours eggs
M024
male body
M023
head
............................................................................AGGCTGCGCCCCTTAACTTG......................................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0
..........................................................................................................................AGCATCACCTGTTCAAGCCGT.......................... 21 3 1 1.00 1 1 0 0 0 0 0 0
...........................................................................AAGGCTTAGCCCCTTAACTTG......................................................................... 21 3 3 1.00 3 0 0 2 1 0 0 0
.............................................................................GGCTTAGCCCCTTAACTTG......................................................................... 19 2 4 0.25 1 0 0 1 0 0 0 0
....GGCGAAGCGGCTTCGAT.................................................................................................................................................... 17 2 6 0.17 1 0 0 0 0 1 0 0
..........................................................................................................AAGAAAGCAGGTCAGTAGTA........................................... 20 3 8 0.13 1 0 0 0 0 0 1 0
..........................................................................CGAGGCTCTGCCCCTTAACTTG......................................................................... 22 3 13 0.08 1 0 0 0 0 0 1 0
............................................................................AGGCTGCGGCCCTTAACTTG......................................................................... 20 3 13 0.08 1 1 0 0 0 0 0 0
.........................................................................CCGAGGCTCTGCCCCTTAA............................................................................. 19 3 14 0.07 1 0 0 0 0 0 0 1
..........................................................................................AATTGGCGTAAGGTA................................................................ 15 1 20 0.05 1 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:453064-453232 + dsi_29865 CTTTCCGCTTCGCCG------------------------------------------------------------------------------AAA----ATAGTGGAACGCCGTGGCATTGTGGGCCTGGGGTAAGTAGTAAT-G--------------------------------------------CGGA--TTGTAGTGCT-------------CCGACTCGGGG------AATTAAACGCATTCC---A----T---TT-----------------------------------------------------TCT----------T-----TC-GTACAGACATCGTAGTGGACAACTGCGCCATCTGCCGAAACCACATCATGGACTTG
droSec2 scaffold_10:386997-387165 + CTTTCCGCTTCGTCG------------------------------------------------------------------------------AAA----ATAGTGGAACGCCGTGGCATTGTGGGCCTGGGGTAAGTAGTAAT-G--------------------------------------------CTGA--TTTTAGTGCT-------------CCGACTCGGGG------AATTAAACGCATTCC---A----T---TT-----------------------------------------------------TCT----------T-----TC-GTACAGACATCGTAGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACTTG
dm3 chrX:541621-541785 + CTTTCCGCTTCGCCG------------------------------------------------------------------------------AAA----ACAGTGGAACGCCGTGGCTCTGTGGGCCTGGGGTAAGTAGTAAT-G--------------------------------------------CGAA--TTGTAGTGCT-------------CCGAGTCGGGG------GATTAACCGCATTCC---A----T---T-------------------------------------------------------------------T-----CG-ATGCAGACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACTTG
droEre2 scaffold_4644:497377-497555 + CTACCCGCTTCCTCG------------------------------------------------------------------------------AAA----ACAGTGGAACGCCGTGGCTTTGTGGGCCTGGGGTAAGTAGTATT-A-------------------------------------------TCAGTAATTGCAGTCCT-------------GCGAATCAGGG------GAATCACCGCTTTCC---A----T---T-T------------------------------------------------CG-----A-TTTCCT--T-----TCGATGCAGACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTG
droYak3 X:461838-461999 + TCCGCATCC--TCCA------------------------------------------------------------------------------AAA----ACAGTGGAACGCCGTGGCTTTGTGGGCCTGGGGTAAGTAGTAAA-----------------------------------------------------TGCACTACT-------------TAAATTCGGGG------AAATCACCACTTTCC---A----T---T-T----------------------------------------------------CCC----------T-----TCGATGCAGACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTG
droEug1 scf7180000409277:348731-348896 - CTTTTCTTTCACCCA------------------------------------------------------------------------------AAA----ACAGTGGAATGCCGTTGCTTTGTGGGCCTGGGGTGAGTAATATT-C--------------------------------------------TAGTA--TTAACTCCT-------------TACAGTTAA--------AAACCGTAGT-TTCC---A----A---TT-----------------------------------------------------TCC----------A-----AT-TTGCAGACATTGTGGTGGATAATTGCGCCATTTGCCGCAACCACATCATGGACCTA
droBia1 scf7180000301760:975643-975835 - TCTCC-------CCGAACACA---------------------------------------------------------ATGCAATAA------CCACAATTTAGTGGAACGCCGTGGCTCTGTGGGCCTGGGGTGAGTAGTCAA-C--------------------------------------------TGGCATTTGCCCTCCT-------------CGCAGGCAGGC------GAATAACCCCTTACC---C----G--TCTT------------------------------------------------TA-----CAC-TCCAATC-----CC-CGCCAGACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTG
droTak1 scf7180000415151:133983-134169 + TCTTCTCTTCCCCCT---------------------------------------GAA-------------AAAATAACATGTAATAA------TTA----ACAGTGGAACGCCGTGGCTTTGTGGGCCTGGGGTGAGTAAAAAT-A-----------------------ACCCAC---------------TGGAA--T------------------------AATCAAGG-------AATAATCAATTAAC---C----G--AT-----------------------------------------------------------AACA-AATC-----CC-CTCCAGACATCGTGGTCGACAATTGCGCCATTTGCCGCAACCACATCATGGATCTG
droEle1 scf7180000491011:1004812-1005006 - TTTTTCCCCTCACTA---------------------------------------ACA-------------AAAACAAAAAAAAATAAA-----ACA----ACAGTGGAATGCCGTGGCTTTGTGGGCTTGGGGTAAGTAATACA-A--------------------------------------------TAGAA--TAGACAACT-------------ATGGATAGGGG-------ACTTACCATTTTCC---C----A---T-T------------------------------------------------CG-----C-A-TCCAA-T-----TG-CCGCAGACATCGTGGTGGACAATTGCGCCATTTGCCGCAACCACATCATGGACCTG
droRho1 scf7180000779506:798289-798462 - CTCCCCACCAAA---------------------------------------------------------------------------AAATGAAAA----ATAGTGGAATGCCGTAGCACTATGGGCCTGGGGTGAGTAATGCA-C--------------------------------------------AGGAT--TC---AACT-------------CCAGATCGGGG------GAATCACCAATCGCC---A----T---T-T------------------------------------------------TC-----C-ATTCT---A-----TT-CCCCAGACATCGTGGTGGACAATTGCGCCATTTGCCGTAACCACATCATGGATCTG
droFic1 scf7180000453927:460221-460405 - CTTTCTTTTTAT----------------------------ATTGCTCTCCCGCTT--------------------------------------AAA----ACAGTGGAATGCCGTTGCTTTGTGGGCATGGGGTGAGTACCACA-TAA--------------------------------------------GT-----------T-----CAAAACTTGCAAATCAAAA------TAACCACAATTTTTC---A----T---T-T------------------------------------------------GC-----A-AATCC---T-----TT-TTGCAGACATCGTGGTCGACAACTGCGCCATTTGCCGCAACCACATCATGGACCTG
droKik1 scf7180000302469:2093145-2093340 - CTCCCCTGCTTGC---AT----TTCTGGAACTCTTTTCATCCTG----------GCC------------------------------T-----CGT----TCAGTGGAATGCCGTGGCTCTCTGGGCCTGGGGTAAGTACCAAG-TAG--------------------------------------------CTA--CC-------------A--------AAGCCACT-GCCTAACAGCAACACT-TCCT---A----ACGCT-C------------------------------------------------CG-----C-CG-----------TAT-CCCTAGACATTGTCGTGGACAATTGCGCCATTTGCAGGAACCACATCATGGATCTG
droAna3 scaffold_12929:1803009-1803181 + GTTTCATTTTCCTTG---------------------------------------GAA------------------------------A-----AAT----GCAGTGGAACGCCGTGGCTCTATGGGCATGGGGTGAGTAATAAC-TAG-------------------TTGC----------------------------------C-----CACAAAGT-----------G-------GACACGATTTT--AACATGGC-CGTT-T------------------------------------------------GG-----T-TATC----T-----CT-CCGCAGACATCGTGGTGGACAATTGCGCCATTTGCCGCAACCACATCATGGACTTG
droBip1 scf7180000396543:261402-261568 + GTTTCATTTTCCTTG---------------------------------------A--------------------------------A-----AAC----ATAGTGGAATGCCGTGGCTCTATGGGCTTGGGGTAAGTAGTTAC-CAT-------------------TTAT----------------------------------C-----CAAAAACT-----------G-------AACATGA------ATCATGAC-CGTT-T------------------------------------------------GG-----T-TATC----T-----TC-TTGCAGACATCGTGGTGGACAATTGCGCCATTTGCCGCAACCATATCATGGACTTG
dp5 XL_group1a:567720-567963 - CCTTGTGCTCCATTC---------------------------------------T--------------------------------A-----AAA----TCAGTGGAACGCCGTAGCTCTATGGGCCTGGGGTGAGTAAAACA-TTCGTAATAGAGAGAATTTCTCT------TTGTCTG--------CCGGCAATAGCAGGCCATCGTT--------TA--ATCAGTG------AAATTAA-----------------------AATCTAAAATACTTTTAAATTACTTCCTGCATGAAATAATTAACAATTT-----------------CGTTTAT-TGGCAGATATCGTTGTTGACAATTGCGCCATTTGCCGCAACCACATAATGGACTTG
droPer2 scaffold_26:55147-55390 - CCTTGTGCTCCATTC---------------------------------------T--------------------------------A-----AAA----TCAGTGGAACGCCGTAGCTCTATGGGCCTGGGGTGAGTAAAACA-TTCGTAATAGAGAGAATTTCTCT------TTGTCTG--------CCGGCAATAGCAGGCCATCGTT--------TA--ATCAGTG------AAATTAA-----------------------AATCTAAAATACTTTTAAATTACTTCCTGCATGAAATAATTAACAATTT-----------------CGTTTAT-TGCCAGATATCGTTGTTGACAATTGCGCCATTTGCCGCAACCACATAATGGACTTG
droWil2 scf2_1100000004590:2577128-2577324 + CTTTTTTCCCCGCAA---------------------------------------AACTCACACACACACACAAACAAACAACA--AAA-----AAA----ACAGTGGAATGCTGTGGCACTTTGGGCTTGGGGTAAGTAATTTT-T-----------------------GT----------------------------CAAAGTT-------------TAAATTTAGGG--------ATTACAATTTA--------------T-T------------------------------------------------GA-----T-AATC-TACA-----CT-TTCCAGATATCGTTGTGGACAATTGTGCCATTTGCCGCAATCATATCATGGATCTG
droVir3 scaffold_13042:797409-797564 + TCTCATCCTCCTCCG------------------------------------------------------------------------------GCT----ACAGTGGAATGCTGTGGCACTCTGGGCGTGGGGTAAGTGGACAGACAA---------------------------------------------TA----------C-----CAAAAACT--------------------------------AACCTAAC-TGAT-C------------------------------------------------AAAATCT----------T-----TC-GTGCAGATATCGTTGTGGACAACTGCGCTATCTGCCGGAATCATATAATGGACTTA
droMoj3 scaffold_6328:2797232-2797404 + TCTTATGCTTTTTTG---------------------------------------T--------------------------------A-----CTT----CCAGTGGAATGCCGTAGCACTATGGGCATGGGGTAAGTCTGCTCCCA----------------------AA----------CCAAAATA-C-GA--TGTAAG------------------TGTATAAGAA------AAATAAATAAAT--C---A----T---TT-----------------------------------------------------C------------T-----TA-TTGCAGATATCGTTGTGGATAATTGCGCTATTTGCCGCAATCATATAATGGACTTA
droGri2 scaffold_15081:1189226-1189394 + CTTTATGCTCGT----ATACAATTT-----------------------------T--------------------------------G-----GCA----ACAGTGGAATGCGGTGGCGCTCTGGGCCTGGGGTAAGTCTACGC--------------------------------------------------------AAAGCC-------------TAGTTATTATG----A-AAATTATGTATTCAC---A----T---C-G--------------------------------------------------------------CGCA-----TT-TTTCAGATATCGTTGTGGATAACTGCGCTATTTGCCGGAATCATATAATGGACCTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CTTTCCGCTTCGCCG------------------------------------------------------------------------------AAA----ATAGTGGAACGCCGTGGCATTGTGGGCCTGGGGTAAGTAGTAAT-G--------------------------------------------CGGA--TTGTAGTGCT-------------CCGACTCGGGG------AATTAAACGCATTCC---A----T---TT-----------------------------------------------------TCT----------T-----TC-GTACAGACATCGTAGTGGACAACTGCGCCATCTGCCGAAACCACATCATGGACTTGSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
............................................................................................................ACGCCGTGGCATTGTGGGCCTGG.........................................................................................................................................................................................................................................................................2311.00100000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................TGCGCCATCTGCCGAAACCACATCAT.......2611.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................C-GTACAGACATCGTAGTGG......................................1911.00100000000000001000
........................................................................................................TGGAACGCCGTGGCATTGTGGGCCTG..........................................................................................................................................................................................................................................................................2611.00100000001000000000
.......................................................................................................GTGGAACGCCGTGGCATTGTG................................................................................................................................................................................................................................................................................2111.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CTGCCGAAACCACATCATGGACTTG2511.00101000000000000000
......................................................................................................AGTGGAACGCCGTGGCATTGTGG...............................................................................................................................................................................................................................................................................2311.00100000001000000000
...............................................................................................A----ATAGTGGAACGCCGTGGCATT...................................................................................................................................................................................................................................................................................2211.00100000000000010000
.................................................................................................................GTGGCATTGTGGGCCTGGTA.......................................................................................................................................................................................................................................................................2011.00100000000000100000
...........GCCG------------------------------------------------------------------------------AAA----ATAGTGGAACGCC...........................................................................................................................................................................................................................................................................................2011.00101000000000000000
...........................................................................................................AACGCCGTGGCATTGTGGGCCTG..........................................................................................................................................................................................................................................................................2311.00100100000000000000
............................................................................................................ACGCCGTGGCATTGTGGGCCT...........................................................................................................................................................................................................................................................................2111.00101000000000000000
............................................................................................................ACGCCGTGGCATTGTGGGCCTGGG........................................................................................................................................................................................................................................................................2411.00100000000000100000
.........TCGCCG------------------------------------------------------------------------------AAA----ATAGTGGAACGC............................................................................................................................................................................................................................................................................................2111.00100000000100000000
........................................................................................................TGGAACGCCGTGGCAG....................................................................................................................................................................................................................................................................................1630.33100000000001000000
droSec2
CTTTCCGCTTCGTCG------------------------------------------------------------------------------AAA----ATAGTGGAACGCCGTGGCATTGTGGGCCTGGGGTAAGTAGTAAT-G--------------------------------------------CTGA--TTTTAGTGCT-------------CCGACTCGGGG------AATTAAACGCATTCC---A----T---TT-----------------------------------------------------TCT----------T-----TC-GTACAGACATCGTAGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACTTGSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
....................................................................................................................................GTAAGTAGTAAT-G--------------------------------------------CTGA--TTTTAGT.................................................................................................................................................................................................2411.0010010
..................................................................................................................................................................................................................................................................................................................................................................GTGGACAACTGCGCCATCTGCCGCA.................2511.0011000
................................................................................................................CGTGGCATTGTGGGCCTGGGAC......................................................................................................................................................................................................................................................................2211.0010001
.....................................................................................................................................................................................................................................................................................................................................................................GACAACTGCGCCATCTGC.....................1811.0010010
.........................................................................................................................................................................................................................................................................................................................................................GACATCGTAGTGGACAACTGCGCCATC........................2711.0011000
....................................................................................................................................................................................................................................................................................................................................................................................TGCCGCAACCACATCATGGACTT.2311.0011000
dm3
CTTTCCGCTTCGCCG------------------------------------------------------------------------------AAA----ACAGTGGAACGCCGTGGCTCTGTGGGCCTGGGGTAAGTAGTAAT-G--------------------------------------------CGAA--TTGTAGTGCT-------------CCGAGTCGGGG------GATTAACCGCATTCC---A----T---T-------------------------------------------------------------------T-----CG-ATGCAGACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACTTGSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
.....................................................................................................................................TAAGTAGTAAT-G--------------------------------------------CGAA--TTGTA...................................................................................................................................................................................................21110.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................GTAAGTAGTAAT-G--------------------------------------------CGAA--TTGTAGTGC...............................................................................................................................................................................................2618.0080000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000001010000000010000000000000000000000000
.................................................................................................................GTGGCTCTGTGGGCCTGGGA.......................................................................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AGTGGAACGCCGTGGCTCTGTGGGCCT...........................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000111000000
........................................................................................................................................................................................................................................................TCC---A----T---T-------------------------------------------------------------------T-----CG-ATGCAGACATCG............................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................GTAGTGCT-------------CCGAGTCGGGG------GA..............................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
......................................................................................................AGTGGAACGCCGTGGCTCT...................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GACATCGTGGTGGACAACTGCGCCAT.........................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AGTGGAACGCCGTGGCTCTGTGGGC.............................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000
....................................................................................................................................GTAAGTAGTAAT-G--------------------------------------------CGAA--TTGTAGTG................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CTGCGCCATCTGCCGCAACCACATC.........2512.0020000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GTGGAACGCCGTGGCTCTGTGGGCC............................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000
.............................................................................................................CGCCGTGGCTCTGTGGGCCTGGGA.......................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CTTCGCCG------------------------------------------------------------------------------AAA----ACAGTGGAACG.............................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................CGCCGTGGCTCTGTGGGCCTGGG........................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................CGTGGCTCTGTGGGCCTGGGG.......................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
...........................................................................................................AACGCCGTGGCTCTGTGGGCCTGGGA.......................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................GTAAT-G--------------------------------------------CGAA--TTGTAGTGCT-------------C................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AGTGGAACGCCGTGGCTCTGT.................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TGTAGTGCT-------------CCGAGTCGGG.......................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................TGGAACGCCGTGGCTCTGTGGGCCT...........................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................AGTAGTAAT-G--------------------------------------------CGAA--TTGTAGTGCT-------------CC...............................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................GTGGCTCTGTGGGCCTGGGAC......................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................CGCCGTGGCTCTGTGGGCCTGG.........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................T-G--------------------------------------------CGAA--TTGTAGTGCT-------------CCGAGTCGGG.......................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
........................................................................................................TGGAACGCCGTGGCTCTGTGGGCCTGGGA.......................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CAACTGCGCCATCTGCCGCAAC...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................ACGCCGTGGCTCTGTGGGCCTGG.........................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................ACGCCGTGGCTCTGTGGG..............................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.......................................................................................................GTGGAACGCCGTGGCTCTGTGGGCCT...........................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GTGGAACGCCGTGGCTCTGTGGGCCTGGG........................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........TTCGCCG------------------------------------------------------------------------------AAA----ACAGTGGAA...............................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
............................................................................................................ACGCCGTGGCTCTGTGGGCCTGGGA.......................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TGGAACGCCGTGGCTCTGTGGGCC............................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................CGCAACCACATCATGGAA...1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................GGCCTGGGGTAAGTAGTAA.............................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.........................................................................................................GGAACGCCGTGGCTCTGTGGGCCT...........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................GTGGTGGACAACTGCGCC...........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................T-------------CCGAGTCGGGG------GATTAACCGCA.....................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................................................................................................................CGTGGCTCTGTGGGCCTGGGA.......................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................GTGGCTCTGTGGGCCTGGGACC.....................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................GGAACGCCGTGGCTCTGTGGGCCTGGG........................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................AACTGCGCCATCTGCCGCAACC..............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................ATCTGCCGCAACCACATCATG......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................CGCAACCACATCATGGACTT.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................GCCATCTGCCGCAACCAC............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ACAACTGCGCCATCTGCCG...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................AACGCCGTGGCTCTGTGGGCCTGGGAC......................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................T-----CG-ATGCAGACATCGTGGTGG......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................GCCTGGGGTAAGTAGTAAT-G--------------------------------------------CG............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GACAACTGCGCCATCTGCC....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................CGTGGCTCTGTGGGCCTGGG........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................CCGTGGCTCTGTGGGCCTGGG........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................ATCGTGGTGGACAACTGC..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................A--TTGTAGTGCT-------------CCGAGTCGGG.......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.......................................................................................................GTGGAACGCCGTGGCTCTGTGGG..............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................ATCGTGGTGGACAACTGCGCG...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AGTGGAACGCCGTGGCTC....................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TGGAACGCCGTGGCTCTGTGGGCCTGG.........................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................GCCTGGGGTAAGTAGTAAT-G--------------------------------------------C.............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................CTCTGTGGGCCTGGGGTAAGTAG................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ACAACTGCGCCATCTGCCGCAACCACA...........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................AA----ACAGTGGAACGCCGTG........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................TCTGCCGCAACCACATCATGGACT..2411.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TCGTGGTGGACAACTGCGC............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................AGTAAT-G--------------------------------------------CGAA--TTGTAGTGCT-------------.................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................ATCGTGGTGGACAACTGCGCC...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................ACTGCGCCATCTGCCGCAACCACATC.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CTTCGCCG------------------------------------------------------------------------------AAA----ACAGTGGAACGCC...........................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GTGGAACGCCGTGGCTCTGTGGGCCTGG.........................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................CGTGGCTCTGTGGGCCTGGGGTAAGTAG................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
........................................................................................................TGGAACGCCGTGGCTCTGTGGGC.............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCCG------------------------------------------------------------------------------AAA----ACAGTGGAACGC............................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................................AGTGGAACGCCGTGGCTCTGTG................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................GGAACGCCGTGGCTCTGTGG...............................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ACAACTGCGCCATCTGCCGCAACCACAT..........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................GCTCTGTGGGCCTGGGG.......................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CGTGGTGGACAACTGCGCCA..........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................GCCTGGGGTAAGTAGTAAT-G--------------------------------------------CA............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................GACAACTGCGCCATCTGCCG...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................GAACGCCGTGGCTCTGTGGGCCTG..........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CATCTGCCGCAACCACATCATGGACT..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................CGTGGCTCTGTGGGCCTGGGAC......................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................GTAAT-G--------------------------------------------CGAA--TTGTAGTG................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TGGAACGCCGTGGCTCTGTGG...............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................GTGGCTCTGTGGGCCTGGG........................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................A--TTGTAGTGCT-------------CCGAGTCGGGG------................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................AA----ACAGTGGAACGCCGTGGCTC....................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............G------------------------------------------------------------------------------AAA----ACAGTGGAACGCCGTGG.......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................................................................................................................................................................................................TTGTAGTGCT-------------CCGAGTCGGGG------................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................GCGCCATCTGCCGCAACCA.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................CAGACATCGTGGTGGACAACT................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................GCGCCATCTGCCGCAACCAC............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................GTGCT-------------CCGAGTCGGGG------GAT.............................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GGCTCTGTGGGCCTGGGAC......................................................................................................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CTACCCGCTTCCTCG------------------------------------------------------------------------------AAA----ACAGTGGAACGCCGTGGCTTTGTGGGCCTGGGGTAAGTAGTATT-A-------------------------------------------TCAGTAATTGCAGTCCT-------------GCGAATCAGGG------GAATCACCGCTTTCC---A----T---T-T------------------------------------------------CG-----A-TTTCCT--T-----TCGATGCAGACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTGSizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................TCGTGGTGGACAACTGCGC............................1912.0022000000
...........................................................................................................................................................................................................................................................................................................................................................................TGCGCCATCTGCCGCAACCACATCA........2511.0011000000
.......................................................................................................GTGGAACGCCGTGGCTTTGTGGG..............................................................................................................................................................................................................................................................................2311.0011000000
.............................................................................................................................................................................................................T-------------GCGAATCAGGG------GAATCACCG.......................................................................................................................................................2111.0010010000
....................................................................................................................................................................................................................................................................................................................................................................GGACAACTGCGCCATCTGCCGCAACCA.............2711.0010100000
.....................................................................................................................................................................................................................................................................................................................................................................GACAACTGCGCCATCTGCCGCAACCA.............2611.0011000000
......................................................................................................AGTGGAACGCCGTGGCTTTGTGGGCCT...........................................................................................................................................................................................................................................................................2711.0010000100
...............................................................................................................................CTGGGGTAAGTAGTATT-A-------------------------------------------TC.............................................................................................................................................................................................................2011.0010010000
......................................................................................................................................................................................................................................................................................................................................................................................CCGCAACCACATCATGGAC...1911.0011000000
.................................................................................................................GTGGCTTTGTGGGCCTGGGAC......................................................................................................................................................................................................................................................................2120.5010000100
droYak3
TCCGCATCC--TCCA------------------------------------------------------------------------------AAA----ACAGTGGAACGCCGTGGCTTTGTGGGCCTGGGGTAAGTAGTAAA-----------------------------------------------------TGCACTACT-------------TAAATTCGGGG------AAATCACCACTTTCC---A----T---T-T----------------------------------------------------CCC----------T-----TCGATGCAGACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTGSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
.......................................................................................................GTGGAACGCCGTGGCTTTGTGGGCCT...........................................................................................................................................................................................................................................................................2611.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................CTGCGCCATCTGCCGCAACC..............2011.00101000000000
......................................................................................................AGTGGAACGCCGTGGCTTTGTG................................................................................................................................................................................................................................................................................2211.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................GACAACTGCGCCATCTGCCGCAACCAC............2711.00101000000000
........................................................................................................TGGAACGCCGTGGCTTTGTGGGCCTGG.........................................................................................................................................................................................................................................................................2711.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................CTGCCGCAACCACATCATGGACC..2311.00100100000000
........................................................................................................TGGAACGCCGTGGCTTTGTGG...............................................................................................................................................................................................................................................................................2111.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................ATCTGCCGCAACCACATCATGGACCTG2711.00101000000000
........................................................................................................TGGAACGCCGTGGCTTTGTGGGCCTG..........................................................................................................................................................................................................................................................................2611.00101000000000
.............................................................................................................................................................................................................T-------------TAAATTCGGGG------AAATCACC........................................................................................................................................................2011.00100100000000
........................................................................................................TGGAACGCCGTGGCTTTGTGGGCC............................................................................................................................................................................................................................................................................2411.00101000000000
..................................................................................................................TGGCTTTGTGGGCCTGGG........................................................................................................................................................................................................................................................................1820.50101000000000
droEug1
CTTTTCTTTCACCCA------------------------------------------------------------------------------AAA----ACAGTGGAATGCCGTTGCTTTGTGGGCCTGGGGTGAGTAATATT-C--------------------------------------------TAGTA--TTAACTCCT-------------TACAGTTAA--------AAACCGTAGT-TTCC---A----A---TT-----------------------------------------------------TCC----------A-----AT-TTGCAGACATTGTGGTGGATAATTGCGCCATTTGCCGCAACCACATCATGGACCTASizeHit CountTotal NormTotal
No Reads
droBia1
TCTCC-------CCGAACACA---------------------------------------------------------ATGCAATAA------CCACAATTTAGTGGAACGCCGTGGCTCTGTGGGCCTGGGGTGAGTAGTCAA-C--------------------------------------------TGGCATTTGCCCTCCT-------------CGCAGGCAGGC------GAATAACCCCTTACC---C----G--TCTT------------------------------------------------TA-----CAC-TCCAATC-----CC-CGCCAGACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTGSizeHit CountTotal NormTotal
No Reads
droTak1
TCTTCTCTTCCCCCT---------------------------------------GAA-------------AAAATAACATGTAATAA------TTA----ACAGTGGAACGCCGTGGCTTTGTGGGCCTGGGGTGAGTAAAAAT-A-----------------------ACCCAC---------------TGGAA--T------------------------AATCAAGG-------AATAATCAATTAAC---C----G--AT-----------------------------------------------------------AACA-AATC-----CC-CTCCAGACATCGTGGTCGACAATTGCGCCATTTGCCGCAACCACATCATGGATCTGSizeHit CountTotal NormTotal
No Reads
droEle1
TTTTTCCCCTCACTA---------------------------------------ACA-------------AAAACAAAAAAAAATAAA-----ACA----ACAGTGGAATGCCGTGGCTTTGTGGGCTTGGGGTAAGTAATACA-A--------------------------------------------TAGAA--TAGACAACT-------------ATGGATAGGGG-------ACTTACCATTTTCC---C----A---T-T------------------------------------------------CG-----C-A-TCCAA-T-----TG-CCGCAGACATCGTGGTGGACAATTGCGCCATTTGCCGCAACCACATCATGGACCTGSizeHit CountTotal NormTotal
No Reads
droRho1
CTCCCCACCAAA---------------------------------------------------------------------------AAATGAAAA----ATAGTGGAATGCCGTAGCACTATGGGCCTGGGGTGAGTAATGCA-C--------------------------------------------AGGAT--TC---AACT-------------CCAGATCGGGG------GAATCACCAATCGCC---A----T---T-T------------------------------------------------TC-----C-ATTCT---A-----TT-CCCCAGACATCGTGGTGGACAATTGCGCCATTTGCCGTAACCACATCATGGATCTGSizeHit CountTotal NormTotal
No Reads
droFic1
CTTTCTTTTTAT----------------------------ATTGCTCTCCCGCTT--------------------------------------AAA----ACAGTGGAATGCCGTTGCTTTGTGGGCATGGGGTGAGTACCACA-TAA--------------------------------------------GT-----------T-----CAAAACTTGCAAATCAAAA------TAACCACAATTTTTC---A----T---T-T------------------------------------------------GC-----A-AATCC---T-----TT-TTGCAGACATCGTGGTCGACAACTGCGCCATTTGCCGCAACCACATCATGGACCTGSizeHit CountTotal NormTotal
No Reads
droKik1
CTCCCCTGCTTGC---AT----TTCTGGAACTCTTTTCATCCTG----------GCC------------------------------T-----CGT----TCAGTGGAATGCCGTGGCTCTCTGGGCCTGGGGTAAGTACCAAG-TAG--------------------------------------------CTA--CC-------------A--------AAGCCACT-GCCTAACAGCAACACT-TCCT---A----ACGCT-C------------------------------------------------CG-----C-CG-----------TAT-CCCTAGACATTGTCGTGGACAATTGCGCCATTTGCAGGAACCACATCATGGATCTGSizeHit CountTotal NormTotal
No Reads
droAna3
GTTTCATTTTCCTTG---------------------------------------GAA------------------------------A-----AAT----GCAGTGGAACGCCGTGGCTCTATGGGCATGGGGTGAGTAATAAC-TAG-------------------TTGC----------------------------------C-----CACAAAGT-----------G-------GACACGATTTT--AACATGGC-CGTT-T------------------------------------------------GG-----T-TATC----T-----CT-CCGCAGACATCGTGGTGGACAATTGCGCCATTTGCCGCAACCACATCATGGACTTGSizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
......................................................................................................................................................................................................................................................................................................................................................GCAGACATCGTGGTGGACAATTGCG.............................2512.002000002
..........................................................................................................GAACGCCGTGGCTCTATGGGC.............................................................................................................................................................................................................................................................................2111.001100000
....................................................................................................................................................................................................................................................................................................................................................................GGACAATTGCGCCATTTGCC....................2011.001100000
...........................................................................................................................................................................................................................................................................................................................................................CATCGTGGTGGACAATTGC..............................1911.001010000
............................................................................................................................................................................................................................................................................................................................................................ATCGTGGTGGACAATTGCGC............................2011.001000100
..........................................................................................................................................................................................................................................................................................................................................................ACATCGTGGTGGACAATTG...............................1911.001000010
........................................................................................................TGGAACGCCGTGGCTCTATGGGCATG..........................................................................................................................................................................................................................................................................2611.001100000
.........................................................................................................GGAACGCCGTGGCTCTATGGGCATG..........................................................................................................................................................................................................................................................................2511.001100000
.........................................................................................................GGAACGCCGTGGCTCTATGGGCATGGG........................................................................................................................................................................................................................................................................2711.001000001
.........................................................................................................GGAACGCCGTGGCTCTATGGGC.............................................................................................................................................................................................................................................................................2211.001010000
.................................................................................................................GTGGCTCTATGGGCATGGGA.......................................................................................................................................................................................................................................................................2020.501100000
..................................................................................................................................................................................................................................................................................................................................................................................TTTGCCGCAACCACATCATGGA....2220.501100000
................................................................................................................................................................................................................................................................................................................................................................................CATTTGCCGCAACCACATCATGGACTT.2720.501100000
...........................................................................................................................................................................................................................................................................................................................................................................TGCGCCATTTGCCGCAACC..............1930.331010000
...............................................................................................................................................................................................................................................................TGGC-CGTT-T------------------------------------------------GG-----T-TATC----T-----TG-........................................................1950.201000100
droBip1
GTTTCATTTTCCTTG---------------------------------------A--------------------------------A-----AAC----ATAGTGGAATGCCGTGGCTCTATGGGCTTGGGGTAAGTAGTTAC-CAT-------------------TTAT----------------------------------C-----CAAAAACT-----------G-------AACATGA------ATCATGAC-CGTT-T------------------------------------------------GG-----T-TATC----T-----TC-TTGCAGACATCGTGGTGGACAATTGCGCCATTTGCCGCAACCATATCATGGACTTGSizeHit CountTotal NormTotal
No Reads
dp5
CCTTGTGCTCCATTC---------------------------------------T--------------------------------A-----AAA----TCAGTGGAACGCCGTAGCTCTATGGGCCTGGGGTGAGTAAAACA-TTCGTAATAGAGAGAATTTCTCT------TTGTCTG--------CCGGCAATAGCAGGCCATCGTT--------TA--ATCAGTG------AAATTAA-----------------------AATCTAAAATACTTTTAAATTACTTCCTGCATGAAATAATTAACAATTT-----------------CGTTTAT-TGGCAGATATCGTTGTTGACAATTGCGCCATTTGCCGCAACCACATAATGGACTTGSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
.................................................................................................................GTAGCTCTATGGGCCTGGG........................................................................................................................................................................................................................................................................1914.0040400000000
..........................................................................................................................................................................................................................................................................................................................................................ATATCGTTGTTGACAATTGCGC............................2213.0031020000000
...........................................................................................................................................................................................................................................................................................................................................................TATCGTTGTTGACAATTGCGCCATT........................2513.0030300000000
...................................................................................................................................................................................................................................................................................................................................................................................TTGCCGCAACCACATAATG......1912.0020200000000
...................................................................................................................................................................................................................................................................................................................................................................................TTGCCGCAACCACATAATGGACTT.2411.0010100000000
............................................................................................................................................................................................................................................................................................................................................................ATCGTTGTTGACAATTGCGCCATTTGC.....................2711.0010100000000
.............................................................................................................CGCCGTAGCTCTATGGGCCTG..........................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................ATATCGTTGTTGACAATTGCGCCAT.........................2511.0010000100000
...................................................................................................................................................................................................................................................................................................................................................................................TTGCCGCAACCACATAATGGACTTG2511.0011000000000
..........................................................................................................GAACGCCGTAGCTCTATGGGCCTGGGA.......................................................................................................................................................................................................................................................................2711.0010100000000
.............................................................................................................CGCCGTAGCTCTATGGGCCTGG.........................................................................................................................................................................................................................................................................2211.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................GTTGTTGACAATTGCGCCATTTG......................2311.0010100000000
........................................................................................................TGGAACGCCGTAGCTCTATGGGCC............................................................................................................................................................................................................................................................................2411.0010000000100
..............................................................................................................GCCGTAGCTCTATGGGCCTGG.........................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................TTTGCCGCAACCACATAATGGACT..2411.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................TGCCGCAACCACATAATG......1811.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................GTTGACAATTGCGCCATTTGCCGCAAC...............2711.0010100000000
.................................................................................................................GTAGCTCTATGGGCCTGG.........................................................................................................................................................................................................................................................................1811.0010100000000
..............................................................................................................GCCGTAGCTCTATGGGCCTGGG........................................................................................................................................................................................................................................................................2211.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................CGTTGTTGACAATTGCGCCATTTGCCGC..................2811.0010100000000
....................................................................................................................................................................................................................................................................................................................................................TGGCAGATATCGTTGTTGACAATTG...............................2511.0010000000010
...................................................................................................................................................................................................................................................................................................................................................................................TTGCCGCAACCACATAATGGACT..2311.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................GTTGACAATTGCGCCATTTGCC....................2211.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................TATCGTTGTTGACAATTGCGCCAT.........................2411.0010010000000
...............................................................................................................................................................................................................................................................................................................................................................GTTGTTGACAATTGCGCCATTTGCCGCAA................2911.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................TATCGTTGTTGACAATTGCGC............................2111.0010000000010
droPer2
CCTTGTGCTCCATTC---------------------------------------T--------------------------------A-----AAA----TCAGTGGAACGCCGTAGCTCTATGGGCCTGGGGTGAGTAAAACA-TTCGTAATAGAGAGAATTTCTCT------TTGTCTG--------CCGGCAATAGCAGGCCATCGTT--------TA--ATCAGTG------AAATTAA-----------------------AATCTAAAATACTTTTAAATTACTTCCTGCATGAAATAATTAACAATTT-----------------CGTTTAT-TGCCAGATATCGTTGTTGACAATTGCGCCATTTGCCGCAACCACATAATGGACTTGSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
..............................................................................................................GCCGTAGCTCTATGGGCCTGGGA.......................................................................................................................................................................................................................................................................2311.001010000
.........................................................................................................GGAACGCCGTAGCTCTATGGGCCTGGG........................................................................................................................................................................................................................................................................2711.001001000
..........................................................................................................................................................................................................................................................................................................................................................ATATCGTTGTTGACAATTGCGCC...........................2311.001100000
............................................................................................................ACGCCGTAGCTCTATGGGCCTGGG........................................................................................................................................................................................................................................................................2411.001001000
..........................................................................................................................................................................................................................................................................................................................................................ATATCGTTGTTGACAATTGCGCCAT.........................2511.001100000
...........................................................................................................AACGCCGTAGCTCTATGGGCCTGGG........................................................................................................................................................................................................................................................................2511.001001000
..............................................................................................................GCCGTAGCTCTATGGGCCTGGG........................................................................................................................................................................................................................................................................2211.001001000
..........................................................................................................................................................................................................................................................................................................................................................ATATCGTTGTTGACAATTGCGC............................2211.001100000
...........................................................................................................................................................................................................................................................................................................................................................TATCGTTGTTGACAATTGCGCC...........................2211.001100000
droWil2
CTTTTTTCCCCGCAA---------------------------------------AACTCACACACACACACAAACAAACAACA--AAA-----AAA----ACAGTGGAATGCTGTGGCACTTTGGGCTTGGGGTAAGTAATTTT-T-----------------------GT----------------------------CAAAGTT-------------TAAATTTAGGG--------ATTACAATTTA--------------T-T------------------------------------------------GA-----T-AATC-TACA-----CT-TTCCAGATATCGTTGTGGACAATTGTGCCATTTGCCGCAATCATATCATGGATCTGSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
...............................................................................................................CTGTGGCACTTTGGGCTTGG.........................................................................................................................................................................................................................................................................2011.00101000
...............................................................................................................................................................................................................................................................................................................................................................GTTGTGGACAATTGTGCCG..........................1911.00100001
...........................................................................................................AATGCTGTGGCACTTTGGGC.............................................................................................................................................................................................................................................................................2011.00100010
..................................................................................................................TGGCACTTTGGGCTTGGG........................................................................................................................................................................................................................................................................1811.00100001
......................................................................................................AGTGGAATGCTGTGGCACTTTGGGCT............................................................................................................................................................................................................................................................................2611.00100010
............................................................................................................ATGCTGTGGCACTTTGGGCTTGGGA.......................................................................................................................................................................................................................................................................2570.29200020
.........................................................................................................GGAATGCTGTGGCACTTTGGGCTTGGGA.......................................................................................................................................................................................................................................................................2870.29220000
.......................................................................................................................................................................................................................................................................................................................................................................................CGCAATCATATCATGGATC..1960.17100010
droVir3
TCTCATCCTCCTCCG------------------------------------------------------------------------------GCT----ACAGTGGAATGCTGTGGCACTCTGGGCGTGGGGTAAGTGGACAGACAA---------------------------------------------TA----------C-----CAAAAACT--------------------------------AACCTAAC-TGAT-C------------------------------------------------AAAATCT----------T-----TC-GTGCAGATATCGTTGTGGACAACTGCGCTATCTGCCGGAATCATATAATGGACTTASizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
...........................................................................................................AATGCTGTGGCACTCTGGGC.............................................................................................................................................................................................................................................................................2014.004000000000000000000000000000000000000000000000000000000000000004
...............................................................................................................................................................................................................................................................................................................................................................GTTGTGGACAACTGCGCT...........................1813.003001000000000100000000000000001000000000000000000000000000000000
.............................................................................................................TGCTGTGGCACTCTGGGCG............................................................................................................................................................................................................................................................................1913.003000000010000000000000000000000000000000000000000000010000000010
...............................................................................................................................................................................................................................................................................................................................................................GTTGTGGACAACTGCGCTAT.........................2012.002000000000000000000000000010001000000000000000000000000000000000
.............................................................................................................TGCTGTGGCACTCTGGGCGTGGGA.......................................................................................................................................................................................................................................................................2411.001000000000000000000010000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................GTTGTGGACAACTGCGCTATCTGCCGG..................2711.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................GGCACTCTGGGCGTGGGGAT.....................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TATCTGCCGGAATCATATAA........2011.001000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................TCTGGGCGTGGGGTAAGTG.................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000010000000000000000000000000000000
...............................................................................................T----ACAGTGGAATGCTGTGGCACTCTGGGCGTGGGG.......................................................................................................................................................................................................................................................................3411.001000000000000000000000000000000000000000000000000000000000010000
................................................................................................................................................................................................................................................................................................................................................................TTGTGGACAACTGCGCTAT.........................1911.001000000000000000000000000000000000100000000000000000000000000000
........................................................................................................................TCTGGGCGTGGGGTAAGTGGA...............................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................GGAATGCTGTGGCACTCTGGGC.............................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................AGTGGAATGCTGTGGCACT...................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................GGCACTCTGGGCGTGGGGT......................................................................................................................................................................................................................................................................1911.001000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................GTTGTGGACAACTGCGCTA..........................1911.001000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................ATCT----------T-----TC-GTGCAGATATCGTTGT........................................2311.001000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TATCGTTGTGGACAACTGC..............................1911.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................GTTGTGGACAACTGCGCTATCTG......................2311.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................GAATGCTGTGGCACTCTGGGCGTGGG........................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................GTGGAATGCTGTGGCACTCTGGGCGT...........................................................................................................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................GGCACTCTGGGCGTGGGA.......................................................................................................................................................................................................................................................................1811.001000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................ATCGTTGTGGACAACTGCGCT...........................2111.001000000000000000000100000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TCGTTGTGGACAACTGCGCTATCTGCCGGAATCATATAA........3911.001000000000000000000000000000000000000000001000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CTATCTGCCGGAATCATATAATGGACT..2711.001000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TGTGGACAACTGCGCTATCTG......................2111.001000000000000000000000010000000000000000000000000000000000000000
............................................................................................................ATGCTGTGGCACTCTGGGCGT...........................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CAACTGCGCTATCTGCCGGAAT...............2211.001000000000000001000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CGTTGTGGACAACTGCGCTATCTGCCGGAATCATATAA........3811.001000000000000000000000000000000000000000000000000000000001000000
...............................................................................................T----ACAGTGGAATGCTGTGGCACT...................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
droMoj3
TCTTATGCTTTTTTG---------------------------------------T--------------------------------A-----CTT----CCAGTGGAATGCCGTAGCACTATGGGCATGGGGTAAGTCTGCTCCCA----------------------AA----------CCAAAATA-C-GA--TGTAAG------------------TGTATAAGAA------AAATAAATAAAT--C---A----T---TT-----------------------------------------------------C------------T-----TA-TTGCAGATATCGTTGTGGATAATTGCGCTATTTGCCGCAATCATATAATGGACTTASizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
..................................................................................................................TAGCACTATGGGCATGGG........................................................................................................................................................................................................................................................................1812.002100010
..............................................................................................................................................................................................................................................................................................................................................................................GCTATTTGCCGCAATCATATAATGGACC..2811.001000010
................................................................................................................CGTAGCACTATGGGCATGGGA.......................................................................................................................................................................................................................................................................2111.001000001
droGri2
CTTTATGCTCGT----ATACAATTT-----------------------------T--------------------------------G-----GCA----ACAGTGGAATGCGGTGGCGCTCTGGGCCTGGGGTAAGTCTACGC--------------------------------------------------------AAAGCC-------------TAGTTATTATG----A-AAATTATGTATTCAC---A----T---C-G--------------------------------------------------------------CGCA-----TT-TTTCAGATATCGTTGTGGATAACTGCGCTATTTGCCGGAATCATATAATGGACCTGSizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
...........................................................................................................................................................................................................................................................................................................................................................TATCGTTGTGGATAACTGCGC............................2111.00110

Generated: 05/19/2015 at 12:23 AM