ID:dsi_29845 |
Coordinate:3r:4629037-4629124 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
CDS [3r_4628716_4629036_-]; exon [3r_4628633_4629036_-]; CDS [3r_4629125_4629202_-]; exon [3r_4629125_4629213_-]; intron [3r_4629037_4629124_-]
No Repeatable elements found
| ##################################################----------------------------------------------------------------------------------------################################################## CCATCGAGGCCCTGGAGGTTTCCCAGGAGGCCACCATTGCCGGAGTCAAGGTGAGTCCCCCCAAATGAGAGATATACAAATAACATAACCTAATTGTGTCTTCCCCATCTCCGTCCATTGCGGTCATCGCGAACGTAGAACCAACTGGCCCAGATCCATGGATTCAACGCCGAGGAATTCAGCCTCGA **************************************************((((....((.((((((.(((((((((((.((........)).)))))).......))))))))...))).))...))))........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M053 female body |
SRR553485 Chicharo_3 day-old ovaries |
SRR553486 Makindu_3 day-old ovaries |
M025 embryo |
GSM343915 embryo |
M024 male body |
SRR618934 dsim w501 ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
M023 head |
O002 Head |
SRR902008 ovaries |
O001 Testis |
SRR902009 testis |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...TCGAGGCCCTGGAGGTTTCCCAGGA................................................................................................................................................................ | 25 | 0 | 1 | 29.00 | 29 | 0 | 11 | 13 | 0 | 0 | 0 | 1 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................AAGAACCAACTGGCCCAGATCCATGGAT......................... | 28 | 1 | 1 | 17.00 | 17 | 0 | 6 | 6 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 1 | 0 | 0 |
| ..ATCGAGGCCCTGGAGGTTTCCCAGGA................................................................................................................................................................ | 26 | 0 | 1 | 10.00 | 10 | 2 | 3 | 4 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................AAGAACCAACTGGCCCAGATCCATGGA.......................... | 27 | 1 | 1 | 8.00 | 8 | 0 | 2 | 4 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................CAAGAACCAACTGGCCCAGATCCATG............................ | 26 | 2 | 1 | 8.00 | 8 | 1 | 0 | 0 | 1 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................AAGAACCAACTGGCCCAGATCCATGG........................... | 26 | 1 | 1 | 6.00 | 6 | 0 | 1 | 0 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................CACCATTGCCGGAGTCAAG.......................................................................................................................................... | 19 | 0 | 1 | 5.00 | 5 | 0 | 0 | 0 | 4 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................................................ATTCAACGCCGAGGAATTCAGCCT... | 24 | 0 | 1 | 5.00 | 5 | 2 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................CAAGAACCAACTGGCCCAGATCCATGG........................... | 27 | 2 | 1 | 4.00 | 4 | 2 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................................TTCAACGCCGAGGAATTCAGCCT... | 23 | 0 | 1 | 4.00 | 4 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................................................AGAACCAACTGGCCCAGATCCATGG........................... | 25 | 0 | 1 | 3.00 | 3 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................................................................................CAACGCCGAGGAATTCAGCCT... | 21 | 0 | 1 | 3.00 | 3 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................CCCAGGAGGCCACCATTGCCGGA................................................................................................................................................ | 23 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................GGCCCAGATCCATGGATTC....................... | 19 | 0 | 1 | 3.00 | 3 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ......................................................................................................................................CAAGAACCAACTGGCCCAGATCCATGGAT......................... | 29 | 2 | 1 | 3.00 | 3 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................................................................................................................CCATGGATTCAACGCCGAG.............. | 19 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................GTTTCCCAGGAGGCCACCATTGC.................................................................................................................................................... | 23 | 0 | 1 | 2.00 | 2 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................................................TCAAGAACCAACTGGCCCAGATCCA.............................. | 25 | 3 | 1 | 2.00 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................................................................................GATTCAACGCCGAGGAATTCAGCCT... | 25 | 0 | 1 | 2.00 | 2 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................AAGAACCAACTGGCCCAGATCCATG............................ | 25 | 1 | 1 | 2.00 | 2 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................................................ATTCAACGCCGAGGAATT......... | 18 | 0 | 1 | 2.00 | 2 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................................................ATTCAACGCCGAGGAATTCAGCCTC.. | 25 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................................CAGATCCATGGATTCAACGCC................. | 21 | 0 | 1 | 2.00 | 2 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ................GGTTTCCCAGGAGGCCACCATTGCCGGA................................................................................................................................................ | 28 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................CAAGAACCAACTGGCCCAGATC................................ | 22 | 2 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................................TGGCCCAGATCCATGGAT......................... | 18 | 0 | 1 | 2.00 | 2 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................CAAGAACCAACTGGCCCAG................................... | 19 | 2 | 5 | 1.20 | 6 | 0 | 0 | 0 | 5 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................................................................................................ATCCATGGATTCAACGCCGA............... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................TCCCAGGAGGCCACCATTGCCGGAGTCAA........................................................................................................................................... | 29 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................................................................ATGGATTCAACGCCGAGGAATTCA....... | 24 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................................................ATTCAACGCCGAGGAATTCAGCCC... | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................TTCCCAGGAGGCCACCATTGCCG.................................................................................................................................................. | 23 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................TTCCCAGGAGGCCACC......................................................................................................................................................... | 16 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................CCCAGGAGGCCACCATTGCCGGAGT.............................................................................................................................................. | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................CACCATTGCCGGAGTCAA........................................................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................CCCAGGAGGCCACCATTGCCGGAGTC............................................................................................................................................. | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................................................CAACTGGCCCAGATCCATG............................ | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................TCCCGGGAGGCCACCATTGCCGGAGT.............................................................................................................................................. | 26 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............GAGGTTTCCCAGGAGGCC............................................................................................................................................................ | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................AAGAACCAACTGGCCCAGATCCATGGATT........................ | 29 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................................................TAGATTCAACGCCGAGG............. | 17 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................................AACTGGCCCAGATCCATGG........................... | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............AGGTTTCCCAGGAGGCC............................................................................................................................................................ | 17 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................................................AGAACCAACTGGCCCAGATCCAT............................. | 23 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................ATTGCCGGAGTCAAG.......................................................................................................................................... | 15 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................CAAGAACCAACTGGCCCAGATCCAT............................. | 25 | 2 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................GGCCCAGATCCATGGATTCAAC.................... | 22 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................ACCATTGCCGGAGTCAAG.......................................................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................................TTCAACGCCGAGGAATTCAGCCTC.. | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................AGGAGGCCACCATTGCCGG................................................................................................................................................. | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................................................ACGCCGAGGAATTCAGCCT... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................................................................ATGGATTCAACGCCGAGGAAT.......... | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................................AACTGGCCCAGATCCATG............................ | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .................GTTTCCCAGGAGGCCACCATTGCCGGAGT.............................................................................................................................................. | 29 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................................................TGGATTCAACGCCGAGGAATTCAGCCTC.. | 28 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................................TGGCCCAGATCCATGGATTCAACGC.................. | 25 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................................................................................CAACGCCGAGGAATTCAGCCTC.. | 22 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................CAGGATGCCACCATTGCCGG................................................................................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................TTCCCAGGAGGCCACCATTGCCGGA................................................................................................................................................ | 25 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .CATCGAGGCCCTGGAGGTTT....................................................................................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................................................ATTCAACGCCGAGGAATTC........ | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................................................TCAAGAACCAACTGGCCCAGATC................................ | 23 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..............GAGGTTTCCCAGGAGGCCACCATTGCCGGA................................................................................................................................................ | 30 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................................................................................CAGCGCCGAGGAATTCAGCCT... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................CACCATTGCCGGGGTCAAGA......................................................................................................................................... | 20 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..ATCGAGGCCCTGGAGGTTTCCCAGGAGGC............................................................................................................................................................. | 29 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..ATCGAGGCCCTGGAGGTTTCCCAGGAG............................................................................................................................................................... | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................TCCCGGGAGGCCACCATTGCCGGA................................................................................................................................................ | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................................................................................................ATCCATGGATTCAACGCCGAGGA............ | 23 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................TCCCAGGAGGCCACCATTGCCGGAGTC............................................................................................................................................. | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................TTCCCAGGAGGCCACCATTGCC................................................................................................................................................... | 22 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................................................CAACTGGCCCAGATCCAT............................. | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..............................................................................................................................................AACTGGCCCAGATCCATGGATTCAACGC.................. | 28 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ............................................................................................................................................CCAACTGGCCCAGATCCATGG........................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................................................TCCATGGATTCAACGCCGAG.............. | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................AAGAACCAACTGGCCCAGATCCATGGAA......................... | 28 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ..............................................................................................................................................................TGGATTCAACGCCGAGGAATTCAGC..... | 25 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................................AACCAACTGGCCCAGATCCATG............................ | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................GTTTCCCAGGAGGCCACC......................................................................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................................................................ATGGATTCAACGCCGAGG............. | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................TTTCCCAGGACGCCACCCTTGCCGGA................................................................................................................................................ | 26 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................................................TGGATTCAACGCCGAGGAATTC........ | 22 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| ...................................................................................................................................................GCCCAGATCCATGGATTCAACGCCGA............... | 26 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................................CAGATCCATGGATTCAACGCCGAGGAA........... | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...................TTCCCAGGAGGCCACCATTGCCGGAGT.............................................................................................................................................. | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ............................................................................................................................................................CATGGATTCAACGCCGAGGAATTCAGC..... | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................TTTCCCAGGAGGCCACCATTGCCGGAGT.............................................................................................................................................. | 28 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................................................................ACTGGCCCAGATCCATGGATTCA...................... | 23 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................................................................GATCCATGGATTCAACGCCGA............... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................GCCATTGCCGGAGTCAGGGTG....................................................................................................................................... | 21 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............................................................................................................................................CAACTGGCCCAGATCCATGG........................... | 20 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................................................................................GAACCAACTGGCCCAGATCCATG............................ | 23 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................................................................................GAACCAACTGGCCCAGATCCATGGA.......................... | 25 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....CGAGGCCCTGGAGGTTTCCCAGGA................................................................................................................................................................ | 24 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................................................CGCCGAGGAATTCAGCCTC.. | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............GGAGGTTTCCCAGGAGGCC............................................................................................................................................................ | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................CAAGAACCAACTGGCCCAGATCCATGGA.......................... | 28 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................CCCAGGAGGCCACCATTGGCGGAGT.............................................................................................................................................. | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............AGGTTTCCCAGGAGGCCACCATTGCCGG................................................................................................................................................. | 28 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................................................ATTCAACGCCGAGGAATTCAGCCTCG. | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................................................................................GATTCAACGCCGAGGAAT.......... | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................TCCCAGGAGGCCACCATTGCCGGAGTCA............................................................................................................................................ | 28 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .CATCGAGGCCCTGGAGGTT........................................................................................................................................................................ | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................TGTCCCAGGAGGCCACC......................................................................................................................................................... | 17 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................CAAGAACCAACTGGCCCAGATCCAG............................. | 25 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................CCACCATTGCCGGAGTCAAG.......................................................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................GGCCCAGATCCATGGA.......................... | 16 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................................................................................AACGCCGAGGAATTCAGCCT... | 20 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................................AACCAACTGGCCCAGATCC............................... | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................ACCATTGCCGGAGTCAAGA......................................................................................................................................... | 19 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................................................................................GAACCAACTGGCCCAGATCCATGGATT........................ | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................TATCCCAGGAGGCCACCAT....................................................................................................................................................... | 19 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................................................AGAACCAACTGGCCCAGATCCATGGAT......................... | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................GGAGGCCACCATTGCCGGAGT.............................................................................................................................................. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................CCACCATTGCCGGAGTCAAGAAC....................................................................................................................................... | 23 | 3 | 2 | 0.50 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| CCATCGAGGCCCTGGAGGAC........................................................................................................................................................................ | 20 | 2 | 3 | 0.33 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................CCATTGCCGGAGTCAAGAA........................................................................................................................................ | 19 | 2 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................................CGTCCCGTGCGGTCATCTC.......................................................... | 19 | 3 | 9 | 0.11 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................................................................CCACATCCTTGGATTCAACC................... | 20 | 3 | 10 | 0.10 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| CCAGCGAGGCCCTGGAGGACT....................................................................................................................................................................... | 21 | 3 | 12 | 0.08 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................................................................ACTGGCACGGATCCAGGGA.......................... | 19 | 3 | 13 | 0.08 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................GCGGTCATAGCGAAGG..................................................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................TCGTGAACGTAGAATCCA............................................ | 18 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
|
GGTAGCTCCGGGACCTCCAAAGGGTCCTCCGGTGGTAACGGCCTCAGTTCCACTCAGGGGGGTTTACTCTCTATATGTTTATTGTATTGGATTAACACAGAAGGGGTAGAGGCAGGTAACGCCAGTAGCGCTTGCATCTTGGTTGACCGGGTCTAGGTACCTAAGTTGCGGCTCCTTAAGTCGGAGCT
**************************************************((((....((.((((((.(((((((((((.((........)).)))))).......))))))))...))).))...))))........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
M023 head |
SRR553486 Makindu_3 day-old ovaries |
M025 embryo |
SRR553488 RT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
SRR902009 testis |
M024 male body |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................AAGGGTCCTCCAGTG.......................................................................................................................................................... | 15 | 1 | 9 | 2.22 | 20 | 15 | 0 | 2 | 0 | 1 | 2 | 0 | 0 | 0 |
| ................CCAAAGGGCCCTCCGCTG.......................................................................................................................................................... | 18 | 2 | 2 | 2.00 | 4 | 0 | 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................AGGGTCCTCCAGTGG......................................................................................................................................................... | 15 | 1 | 15 | 1.93 | 29 | 18 | 0 | 6 | 0 | 2 | 3 | 0 | 0 | 0 |
| ..................................................................................................................................................CCGGGCCTAGGTACCTA......................... | 17 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................AAGGGCCCTCCAGTG.......................................................................................................................................................... | 15 | 2 | 20 | 0.55 | 11 | 0 | 0 | 11 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................AAGGGTCCTCCAGTGG......................................................................................................................................................... | 16 | 1 | 4 | 0.50 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................................ACAGGGTTTAGGTACCTAAGTG..................... | 22 | 3 | 4 | 0.25 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...................AAGGGTCCTCCAGTGGGTA...................................................................................................................................................... | 19 | 3 | 17 | 0.24 | 4 | 2 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ................CCAAAGGGTCCTTCGCTG.......................................................................................................................................................... | 18 | 2 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................................................................................CTTAGCGCCTGCATCTTGG.............................................. | 19 | 3 | 6 | 0.17 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .........................................................................................................................................................TAGGTATGTATGTTGCGGCT............... | 20 | 3 | 6 | 0.17 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...............................................................................................................GCAGGTAACCCCAGT.............................................................. | 15 | 1 | 8 | 0.13 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .....................................................................................................................................GAATCTTGGCTGACTGGGT.................................... | 19 | 3 | 10 | 0.10 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................................GCAGGTAAGGCCAGGAGAGC......................................................... | 20 | 3 | 10 | 0.10 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...................AAGGGCCCTCCAGTGG......................................................................................................................................................... | 16 | 2 | 20 | 0.10 | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............TCCAAAGGGCCCTTCGCTG.......................................................................................................................................................... | 19 | 3 | 12 | 0.08 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................CCGGTAGGAACGGCCTCGGT............................................................................................................................................ | 20 | 3 | 14 | 0.07 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ................................................................................................................CAGGTATTGCCAGTAGAGC......................................................... | 19 | 3 | 16 | 0.06 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| .....................GGGCCCTCCAGTGGTA....................................................................................................................................................... | 16 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................TGGATTGACACAGATG..................................................................................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................................................CACGGAAGGGGTTCAGGCA.......................................................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
Generated: 04/24/2015 at 10:14 AM