ID:

dsi_29807

 Coordinate:

3l:20718705-20718854 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.8 -28.6 -28.6

Flybase annnotation

five_prime_UTR [3l_20717961_20718704_+]; exon [3l_20717961_20718704_+]; intron [3l_20718705_20720442_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GAAAGAGGAAGAAGAAGAAGAAGCAGCAGCGCAGCCGGATTTGCAAATAGGTATGTGTGTGCGTGCGTGTGTGAGTGCGTATCTTGAAGATACAGAAACAAAATTGTGTTAAATTAAGACAGTTTTCCGCTCGTTCTCCTCTCTTGTACTCTCTTTTCGTGACATTTAGCCGTTGAATGACGTCGTCGCCGGCAATTTTTCAACAATTAAACAAAAACAACAAATTTATCAGACGACCACAGCTACAGCT
**************************************************((((((....))))))((((..((((((((((((...))))))......((((((((.(((...))).))))))))...................))))))..........))))...((((.(((.((....))))).)))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M053
female body
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
..........................................................................................................................TTTTCCGCTCGTTCTCCTCTCTTG........................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................TCGTTCTCCTCTCTTGTACTC................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
...................AAGGCAGCAGCGCAGCCGGATTTG............................................................................................................................................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................................................................................GAATGACTTCGTCGCCGCC......................................................... 19 2 2 0.50 1 0 0 1 0 0 0 0
...................................................................TGTGTGACTGCGTACCT...................................................................................................................................................................... 17 2 16 0.19 3 0 0 0 3 0 0 0
..AAGAGGAAGAAGAAGA........................................................................................................................................................................................................................................ 16 0 6 0.17 1 0 0 0 0 0 1 0
....................................................................GTGTGACTGCGTACCT...................................................................................................................................................................... 16 2 20 0.15 3 0 0 0 3 0 0 0
.....................................................................................................................................................................................................................................CATACGACCACAGCT...... 15 1 7 0.14 1 0 0 0 0 1 0 0
.....................................................................TGTGACTGCGTACCTT..................................................................................................................................................................... 16 2 20 0.10 2 0 0 0 1 1 0 0
...................................................................TGTGTGACTGCGTACC....................................................................................................................................................................... 16 2 20 0.10 2 0 0 0 2 0 0 0
........................GTCAACGCAGCCGGATTTGC.............................................................................................................................................................................................................. 20 3 11 0.09 1 0 0 0 0 0 0 1
...................................................................................................................................................................GTTTAGCCGTTGACTGAC..................................................................... 18 2 11 0.09 1 0 0 1 0 0 0 0
..........................................................................................................................................................................CGTTGAATGACGTGCTTGC............................................................. 19 3 17 0.06 1 0 1 0 0 0 0 0
.TAAGAGGAAGAAGACAAAGAAG................................................................................................................................................................................................................................... 22 3 18 0.06 1 0 0 0 0 1 0 0

Anti-sense strand reads

CTTTCTCCTTCTTCTTCTTCTTCGTCGTCGCGTCGGCCTAAACGTTTATCCATACACACACGCACGCACACACTCACGCATAGAACTTCTATGTCTTTGTTTTAACACAATTTAATTCTGTCAAAAGGCGAGCAAGAGGAGAGAACATGAGAGAAAAGCACTGTAAATCGGCAACTTACTGCAGCAGCGGCCGTTAAAAAGTTGTTAATTTGTTTTTGTTGTTTAAATAGTCTGCTGGTGTCGATGTCGA
**************************************************((((((....))))))((((..((((((((((((...))))))......((((((((.(((...))).))))))))...................))))))..........))))...((((.(((.((....))))).)))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
....................................................................................................................TCTGTCACAAGGCCAGCA.................................................................................................................... 18 2 1 4.00 4 4 0 0 0 0 0 0 0
....................................................................................................................TCTGTCACAAGGCCAGCAA................................................................................................................... 19 2 1 3.00 3 3 0 0 0 0 0 0 0
.....................................................................................................................CTGTCACAAGGCCAGCA.................................................................................................................... 17 2 5 1.00 5 5 0 0 0 0 0 0 0
................................................................CGCACACACTCACGCATAGAACT................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0
..............................................................................................CTTTGTTTTAAGACCATTTAA....................................................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................................CTGTCAAAAGGCGAGCAAGA................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0
......................................................................................................................................AGAGAAGAGAACATGA.................................................................................................... 16 1 2 0.50 1 0 0 0 0 1 0 0 0
......................................................................................................................TGTCACAAGGCCAGCAA................................................................................................................... 17 2 9 0.44 4 4 0 0 0 0 0 0 0
..............................................................................................................TTTAATTCTGTCATAAG........................................................................................................................... 17 1 6 0.33 2 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................GCTAAGGCCGTTAAAAAGTTGT............................................. 22 3 4 0.25 1 0 0 0 0 0 1 0 0
.....................................................................................................................CTGTCACAAGGCCAGCAA................................................................................................................... 18 2 4 0.25 1 1 0 0 0 0 0 0 0
......................................TAAACGTTTATCCATA.................................................................................................................................................................................................... 16 0 20 0.25 5 0 0 0 0 5 0 0 0
...................................................................................................................CTCTGTCACAAGGCCAGCA.................................................................................................................... 19 3 7 0.14 1 1 0 0 0 0 0 0 0
...............................................................................................................TTAATTCTGTCATAAG........................................................................................................................... 16 1 7 0.14 1 0 0 0 0 0 1 0 0
.................................................................................................................................................................................ACTGCAGCAGGGGCC.......................................................... 15 1 7 0.14 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TTGTTAATTGGTATTTGTTGAT........................... 22 3 8 0.13 1 1 0 0 0 0 0 0 0
..................................................................................................................ACTCTGTCAAAGGGCGA....................................................................................................................... 17 2 16 0.13 2 2 0 0 0 0 0 0 0
......................................................................................................................................................GAGAAATCCACTGTATATC................................................................................. 19 3 8 0.13 1 0 0 0 0 0 0 1 0
.....................................................................................CTTGTAGGTCTTTGTTTAAACA............................................................................................................................................... 22 3 9 0.11 1 0 0 0 0 0 0 0 1
.....................................................................................................................CTGTCACAAGGCCAGC..................................................................................................................... 16 2 20 0.10 2 2 0 0 0 0 0 0 0
......................................................................................................................TGTCACAAGGCCAGCA.................................................................................................................... 16 2 20 0.10 2 2 0 0 0 0 0 0 0
................................................................................................................TAATTCTGTCATAAG........................................................................................................................... 15 1 12 0.08 1 1 0 0 0 0 0 0 0
............................................................................................................................................GAGAACTTGAGAGAGAAG............................................................................................ 18 2 13 0.08 1 0 0 0 0 0 1 0 0
.......................................AAACGTTTATCCATA.................................................................................................................................................................................................... 15 0 20 0.05 1 0 0 0 0 1 0 0 0
.............................................................................................................................AGGCGAGCAAGATGG.............................................................................................................. 15 2 20 0.05 1 0 0 0 0 1 0 0 0
..........................................................................................................................................GGGAGAACTTGAGAGA................................................................................................ 16 2 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:20718655-20718904 + dsi_29807 GAAAGAG---GA----------AGAAG---AAGAAGAA--------GCAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--TG----T----GC--------------GTGCG--------TG--TGTGA----------------------GTGCGTATCTTGAAGATACAGAAA--------CAA-----------------------------------------AATTGTG-TTAAATTAAGACAGT-TT-------------------------------------------------------TCCG------CT----C---------GTTCTCCT-CTCT------TGT----A----CTCTCTTTT-------C---------------GTGACATTTAG---------------CCGT------------------------TGAATGACGTCGTCG---CCGGCAA---TTTTTCAACAATTAA----AC----AAAAACAACAAATTT-------------------------------ATCAGA----CG-----ACCACAGCTACAGCT
droSec2 scaffold_11:1122902-1123137 + GA---------------------------GAAG---AA--------GCAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--TG----T----GC--------------GTGCG--------TG--TGTGA----------------------GTGCGTATCTTGAAGATACAGAAA--------CAA-----------------------------------------AATTGTG-TTAAATTAAGACAGT-TT-------------------------------------------------------TCCG------CT----C---------GTTCTCCT-CTCT------TGT----A----CTCTCTTTT-------C---------------GTGACATTTAG---------------CAGA------------------------TGAATGACGTCGTCG---CCGGCAA---TTTTTCAACAATTAA----AC----AAAAACAACAAATTT-------------------------------ATCAGA----CG-----ACCACAGCTACAGCT
dm3 chr3L:21169585-21169825 + GAAAGAG---G----------------AAGAAG---AA--------GAAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--TG----T----AC--------------GTGCG--------TG--TGAGA----------------------GTGCGTATCTTGAAGATACAGAAA--------CAA-----------------------------------------AATTGTG-TTAAATTAAGACAGT-TT-------------------------------------------------------TCCG------CT----C---------GTTCACCT-CTCT------TGT----A----CTCTC--TT-------C---------------GTGACATTTAG---------------CCGC------------------------TGAATGACGTCGTCG---CCGGCAA---TTTTTCAACAATTAA-----C----AAAAACAACAAATTT-------------------------------ATCAGA----CG-----ACCACAGCTACAGCT
droEre2 scaffold_4784:20854180-20854412 + GAA-------------------------AGAAG---AA--------GAAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--TG----T----GT--------------GCGTG--------TG--TGTGA----------------------GTGCGTATCTTGAAGATACAGAAA--------CAA-----------------------------------------AATTGTG-TTAAATTAAGACACT-TT-------------------------------------------------------TCCG------GT----C-----------TCCCCT-CTCT------TAT----A----CTCTCTTTT-------C---------------GTGACATTTAG---------------CCGC------------------------TGAATGACGTCGTCG---CCGGCAA---TTTTTCAACAATTAAAAGA-A----AAAAAAAACAAATTT-------------------------------ATCAGA----CC-----ACCA------CAGCT
droYak3 3L:19357685-19357931 - GAA-GAG---G----------------AAGAAG---GA--------GAAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--TG----T----GCGTGT----GTGCGTGTGTG--------TG--TGTGA----------------------GTGCGTATCTCGAAGATACAGAAA--------CAA-----------------------------------------AATTGTG-TTAAATTAAGACACT-TT-------------------------------------------------------TCCG------CT----C---------TTTCCCCT-CTTT------GGT----A----CTCTCTTTT-------C---------------GTGACATTTAG---------------CCGC------------------------TGAATGACGTCGTCG---CCGGCTA---TTTTTCAACAATTAA----CCAAAAAAAAAAAGCAAATTT-------------------------------ATC-GA----CG-----AC--------CA-CA
droEug1 scf7180000409711:4829230-4829472 - GGAGGAG---AA----------AGAAGAAGAAG---AA--------GAAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGAG--TG----T----GT----------GC--TTGTG--------TA--TGTGA----------------------GTGCGTATCTTGAAGATACAAAAA--------CAA-----------------------------------------AA-TGTG-TTAAAATAAGACACT-TT-------------------------------------------------------TCCG------CT----C---------TTTCAT----T------------CTCGCTCTCTCTCATTT-------C---------------GTGACATTTAG---------------CCGC------------------------TGAATGACGTCGTCG---CCGGCAACAATTTTTCAACAATTAATTAACCAA----AAA---------A----------------------------TAGATCGGT----CG-----AC--------CAGCT
droBia1 scf7180000302193:4865767-4866011 - GGAGGAG---AA----------ATATTAAAGAG---AA--------GAAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--TG----T----GT----------G----TGTG----AGTGTG--TGAGA----------------------GTGCGTATCACGAAGATACAACAA--------CAA------------------------------------------ATTGTG-TTAAAATAAGACACT-TT-------------------------------------------------------TCCG------CT----C---------TTTCTCCG-CTCA------CTT--ACT----CTCTCTCCT-------C---------------GTGACATTTAG---------------CCGC------------------------TGAATGACGTCGCCTTCGCCGGCGA---TTCTTCAACAATTAATTAACCAA----AAA---------T-------------------------------ATCGGA----CG-----AC--------CAGCT
droTak1 scf7180000414337:410104-410340 - GGAGAAA---TA----------ATAAGAAGAAG---AA--------GAAGCAG-------CAGCAGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--AG----T----------------------GAG--------TG--TGTGA----------------------GTGCGTATCATGAAGAAACAAAAA--------CAA-----------------------------------------AATTGTG-TTAAAATA---CACT-TT------------------------------------------------------TTCCT------C---------------TCTCTA------T------TTT----ACTCTCTCTCTGCT-------C---------------GTGACATTTAG---------------CCGC------------------------GGAATGACGTCGTCGTCGCCGGCAA---TTCTTCAACAATTAATTAACCAA----AAA---------T-------------------------------ATCGGA----CG-----AC--------CAGCT
droEle1 scf7180000491193:2180664-2180920 - GGAGGAG---AA----------GTAGGAAGAAG---AA--------GAAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--TG----T----GTGTGTGTGTGTG------TG--TGTGTGCT--TGAGA----------------------GTGCGTATCTTAAAGATACAAAAA--------CAA-----------------------------------------AA-TGTG-TTAAAATAAAACATT-TT-------------------------------------------------------TCCG------CT----C---------TTTCTTCG-CTCT------TTT--TCA----CTCTCTTCT-------T---------------GTGACATTTAG---------------CCGC------------------------GGAATGACGTCGTCG---CCGGCTA---TTTTTCAACAATTAATTTACCAA----AAA---------A-------------------------------ATCCGT----CGAGCAGAC--------CAGCT
droRho1 scf7180000778842:406-640 - GGAGGAG---AA----------GCAGGAAGAAG---AA--------GAAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--TG----T----------------------GTG--------TG--TCAGA----------------------GTGCGTATCTTGAAGATACAAAAA--------CAA-----------------------------------------AA-TGTG-TTAAAATAAGGCACT-TT------------------------------------------------------TTCCG------CT----C---------TTTCTTCT-CTCT------TTT--TCA----CTCTCTTTT-------T---------------GTGACATTTAG---------------CCGC------------------------TGAATGACGTCGTCG---CCGGCTA---TTTTTCATCAATTAATTAACCAA----AAA---------A-------------------------------ATCAGA----CG-----AC--------CAGCT
droFic1 scf7180000453929:321068-321296 + GAAGG----------------------AAGGAG---AA--------GAAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATATA--CG----T----GAATGTGT--GTG----TGTG----TGTGTG--CGAGA----------------------GTGCGTATCTCAAAAGTACAAAAA--------CAA-----------------------------------------AATTGTG-TTAAAATAAGATACT-TT-------------------------------------------------------TCCG------CT----C---------TT------------------TT----A----CTCTCTATT-------C---------------GTGACATTTAA---------------CCGC------------------------TGAATGACGTCGTCG---CCGGCAA---TATTTCAACAATTAATTAACCAA----AAA---------A-------------------------------GTCGGA----CG-----GC--------CAGCT
droKik1 scf7180000302260:147364-147623 - GAAAGAA---GC----------AGA-GGCGTAG---CA--------GAAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--TG----T----TGGAGTGTTGGTGTTTGTGTG--------CG--TGTGA----------------------GTGCGTATCCA----ATGCAA-------------A-----------------------------------------AAATGTT-TTAAAAAAAGCCACT-A----AA---CTTGAGCAAATCAC--------------------------------TTCCTTC-------------AACGC--TCTCCG---C-------------ACCACTCCCTCTCTCTT-------C---G-------GCGAGTGACATTTAG---------------CGGC------------------------GGAATGACGTCGTCG---CCGGCAG---TTTTTGAACAATTAATTAACCAA----AAA---------T--------------------------------T--------CG-----GC--------CAGCT
droAna3 scaffold_13337:8530392-8530723 - GGCGGAG---GA----------AGAA---GAAG---AAGAGCACCA-GAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGCCAATG----TGTGTGTGTGTGTGTGTG------TG--TGTG--TGTGTGAGTGTGTGTTCTCTCGTAGGTGTGAGTGCGTATCTCAAAGATACGAAAAGTCCAATACAA------------------------------------------ATAGTTTTTAAAAAAAGATACG-T-----------------------------G------------AAGG------TGCTTCCGTTTCACTCTCCT-CTCGCGCTCTCTCTC----T------------------------CTCTCTCTCTCTCTCTGTCT---CGAGTGTGACATTTAA---------------CA----------------------------AAT---------G---CCGGCAA---T-----AAAAAAAAA----AC----AAAAAGAA-ATATTTGATTTGATTCTCATTATTCGCTC------------GATGATCG-----TG--------CAGCT
droBip1 scf7180000396541:670198-670489 - GGAGCAA---GA----------AG---AAGAAG---AAGAGCGCCA-GAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGCCAACG----T----GTA------TATGTGTGTGTG--------AG--TGTGA----------------------GTGCGTATCTCAAAGATACGAAAAGTCCAATACAA------------------------------------------ATGGTG-TTAAAAAAAGATACATG---AA----------------------TCG------------AAGG------CGCTTCCGTTTCA-CT----C---GAGCTCTCTCTC----C------------CCCATTCTCTCTCTCTC-------T---------------GTGACATTTAA---------------CA----------------------------AAT---------G---CCGGCAA---TA----AAAAACAAA----AA----AAAAACGATATATTTTATTTGATTTTCATTATTCGACC------------AACGATCG-----TG--------CAGCT
dp5 XR_group5:641726-642024 + CGAAGAG---TG----------ACGAC---AAG---AA--------GAAGC-------------AGCGCAGTCAACGCAGCCGGATTTGCAAATAATAGAGGT------ATGTG--TG----T----GTTA------GTACGTGTGTG--------TG--TATAC----------------------ATGCGTATCGCTAAGATACAAA------------------------------------------------------GATTTTG-TTAAAAAAAGACACT-GC---------CT------------AATCTC------------CAATCGCCTCCGCTTCCG------------------------------------------ATGCTCA----CTCTC---T-------T---------------GTGACATTTAGA---AATCAATTTGGTTGCTCTCTCTCTCTCTGCAGCAGCAGCC----GACTGCGACG---CCAGCAG---CATTTTCGCATGACG----TC----GAAAGCAGCAG---C--------------------AGC---AGCAGAT--------CGTGCTGAG--------CAG--
droWil2 scf2_1100000004511:5854726-5855032 - GAAACAG---CAGCAGCGACGAACAA---GAAG---AA-----------GAC-AAACTGGCAACAGCGCAGCCAACGTCAAGATATTTGCAAATCAAATTGGT------ATGCG--TG----T----A----------------TGTG--------TG--TACGA----------------------GTGCGTATCTCAGACATACATATA--------CAAGCATATATACATATATATATATATTTATATGTATGCAAAACGATTGTT-TTAAATAAAGATCTT-TTGCTAACAATTTGGCTAAA--------------------------C------TGTTTCCGTTATATTT---------TGCTCTATCTC----T------------CTCA----CTCTTTGTTGTTC---TGTCACTCTAACGCATGTGACATTTAG---------------CCAG------------------------CGAATGACGTCGTCG---TCG--------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:20405128-20405382 + GGGACAC---G----------------AAGAAG---AA--------CAAGC-------------A--GC---------AGCCGGATTTGCAAAA-----AAATGTGAGTATTTA--TTTAGAC----A--------TAAGTATGTGTG--------CG--TGAGT----------------------GTGCGTATCTGTG----------------------------------------------------------------AGCGTG-TTAAAAAAAGATC-ATG---CAACTATTTGGCCAAGACACGCATTCG------------CATTCGCCTCCGCTTCCG------TTCTTT-T--TCGTTTTTTTT-------------------TTG----TTTTTTTTT---TTTTTGTTGCTT---TTTATTTGACATTTAAATTTGACAAATTTGGCCGC--------------------------------------------------------------------------------------------------------------------------------------A-----GCCGCAATCTCGGCA
droMoj3 scaffold_6680:8113777-8114056 + GAGGGAGCCGAA---GC-----AGAAGAAGAAG---AA--------GAAGCAG----------CA--GC---------AGCCGGATTTGCAAATAA----AGT--AAGTATTTA--TTTAGGC----A--------TATGTGTGTGAGAGTGAGAGGA--GGAGT----------------------GTGCGTATCTGTG----------------------------------------------------------------AGCGTG-TTAAAAAAAGATC-ATG---CAACTATTTGGCCAAGACACGCATTCACATTCGCACTCGCACTCGCCTCCGCTTCCG------TT----T---------GTTTTATTTTTTT------TTT----A----TT----------------TCGCTT---TTCATGTGACATTTAA---------------A--T------------------------TTAACAAATTCGCCC---TCGGCCA---GTC-----------------------------------------------------------CA-------ATT-------GG-----AA--------CAGCT
droGri2 scaffold_15110:12094504-12094823 - GAGATAG---AA----------A-ATCAAGAAG---AA--------GAAGCAA----------CA--GC---------AGCCGGATTTGCAAAT-----AAA-GTGAGTATTTG--GG----C----AT--------------GTGTG--------TG--TGTGA----------------------GTGCGTATCTGTG----------------------------------------------------------------AGCGTG-TTAAAAAAAGATC-ATG---CAACTATTTGGCCAAGACACGCATTCG------------CATTCGCCTCCACTTCCG------TTATTTTATTTCATTTTATTTA----TATTTTTTTTCT----G----CTCGCTTTT--------------------CATGTGACATTTAAATTTGACAAATTTGGCCGCAGTCGCAGTCTCTACGTCGGC-----AGAGGCAGCGCAG---CCAGCAA---ATCTAA------------------------------------CTTAATCACG----TTTGACCAAA--TGGCTC-----ATTA-----AA--------AAGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAAAGAG---GA----------AGAAG---AAGAAGAA--------GCAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--TG----T----GC--------------GTGCG--------TG--TGTGA----------------------GTGCGTATCTTGAAGATACAGAAA--------CAA-----------------------------------------AATTGTG-TTAAATTAAGACAGT-TT-------------------------------------------------------TCCG------CT----C---------GTTCTCCT-CTCT------TGT----A----CTCTCTTTT-------C---------------GTGACATTTAG---------------CCGT------------------------TGAATGACGTCGTCG---CCGGCAA---TTTTTCAACAATTAA----AC----AAAAACAACAAATTT-------------------------------ATCAGA----CG-----ACCACAGCTACAGCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................................................................................T-TT-------------------------------------------------------TCCG------CT----C---------GTTCTCCT-CTCT------TG...................................................................................................................................................................................................................................2411.00110000000000000000
...................................................................................................................................................................................................................................................................................................................................................................T----C---------GTTCTCCT-CTCT------TGT----A----CTC......................................................................................................................................................................................................................2111.00110000000000000000
..AAGAG---GA----------AGAAG---AAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1660.17100000000010000000
droSec2
GA---------------------------GAAG---AA--------GCAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--TG----T----GC--------------GTGCG--------TG--TGTGA----------------------GTGCGTATCTTGAAGATACAGAAA--------CAA-----------------------------------------AATTGTG-TTAAATTAAGACAGT-TT-------------------------------------------------------TCCG------CT----C---------GTTCTCCT-CTCT------TGT----A----CTCTCTTTT-------C---------------GTGACATTTAG---------------CAGA------------------------TGAATGACGTCGTCG---CCGGCAA---TTTTTCAACAATTAA----AC----AAAAACAACAAATTT-------------------------------ATCAGA----CG-----ACCACAGCTACAGCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................CT----C---------GTTCTCCT-CTCT------TGT----A----C........................................................................................................................................................................................................................2011.0011000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTCGTCG---CCGGCAA---TT.....................................................................................................1911.0010010
.................................................GC-------------AGCGC---------AGCCGGATTTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
...............................................................................................................GTG--TG----T----GC--------------GTGCG--------TG--TGTGA----------------------GTGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
..............................................................................................................TGTG--TG----T----GC--------------GTGCG--------TG--TG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510010
dm3
GAAAGAG---G----------------AAGAAG---AA--------GAAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--TG----T----AC--------------GTGCG--------TG--TGAGA----------------------GTGCGTATCTTGAAGATACAGAAA--------CAA-----------------------------------------AATTGTG-TTAAATTAAGACAGT-TT-------------------------------------------------------TCCG------CT----C---------GTTCACCT-CTCT------TGT----A----CTCTC--TT-------C---------------GTGACATTTAG---------------CCGC------------------------TGAATGACGTCGTCG---CCGGCAA---TTTTTCAACAATTAA-----C----AAAAACAACAAATTT-------------------------------ATCAGA----CG-----ACCACAGCTACAGCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..AAGAG---G----------------AAGAAG---AA--------GAAGC-------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1922.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...........................................................................................AAT-----AGGT------ATGTG--TG----T----AC--------------GTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................................................................................................................................................................................................................................................................................TT-------------------------------------------------------TCCG------CT----C---------GTTCACCT-CTCT------TGT----A----CTC......................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAAATTT-------------------------------ATCAGA----CG-----ACC............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................G---AA--------GAAGC-------------AGCGC---------AGCCGGATTTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACGTCGTCG---CCGGCA...........................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AAG---AA--------GAAGC-------------AGCGC---------AGCCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................TACAGAAA--------CAA-----------------------------------------AATTGTG-TTA........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................TG----T----AC--------------GTGCG--------TG--TGAGA----------------------GTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AAG---AA--------GAAGC-------------AGCGC---------AGCCGGATTTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................AGAAG---AA--------GAAGC-------------AGCGC---------AGCCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................ATGTG--TG----T----AC--------------GTGCG--------TG--T.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TTAAGACAGT-TT-------------------------------------------------------TCCG------CT----C---------GTTCA...................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.........................................................................................................................................................................................................................................................................................ACAGT-TT-------------------------------------------------------TCCG------CT----C---------GTTCACCT-CTCT------.....................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GCGC---------AGCCGGATTTGCAAAT-----AGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................C-------------AGCGC---------AGCCGGATTTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................AGA----------------------GTGCGTATCTTGAAGATACA...........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.............................................................................................................ATGTG--TG----T----AC--------------GTGCG--------TG--TG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.................................................GC-------------AGCGC---------AGCCGGATTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................TTGCAAAT-----AGGT------ATGTG--TG----................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................AGCCGGATTTGCAAAT-----AG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TCTTGAAGATACAGAAA--------CA.............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................AGGT------ATGTG--TG----T----AC--------------GTGCG--------TG--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
............................................................................................................................................................................................................................................................................................GT-TT-------------------------------------------------------TCCG------CT----C---------GTTCACCT-...............................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AGC-------------AGCGC---------AGCCGGATTTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...AGAG---G----------------AAGAAG---AA--------GAAGC-------------AGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
................................................................................CCGGATTTGCAAAT-----AGGT------A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AAGAG---G----------------AAGAAG---AA--------GAAGC-------------AGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................GATTTGCAAAT-----AGGT------ATGTG--TG----................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................C-------------AGCGC---------AGCCGGATTTGCAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
...........................AAGAAG---AA--------GAAGC-------------AGCGC---------AGCCGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................CCG------CT----C---------GTTCACCT-CTCT------TG...................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................A--------GAAGC-------------AGCGC---------AGCCGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................GAAG---AA--------GAAGC-------------AGCGC---------AGCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................AAGAAG---AA--------GAAGC-------------AGCGC---------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
...........................AAGAAG---AA--------GAAGC-------------AGCGC---------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................AG---AA--------GAAGC-------------AGCGC---------AGCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...AGAG---G----------------AAGAAG---AA--------GAAGC-------------AGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................AGAAG---AA--------GAAGC-------------AGCGC---------AG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...AGAG---G----------------AAGAAG---AA--------GAAGC-------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......G---G----------------AAGAAG---AA--------GAAGC-------------AGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18110.1820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
droEre2
GAA-------------------------AGAAG---AA--------GAAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--TG----T----GT--------------GCGTG--------TG--TGTGA----------------------GTGCGTATCTTGAAGATACAGAAA--------CAA-----------------------------------------AATTGTG-TTAAATTAAGACACT-TT-------------------------------------------------------TCCG------GT----C-----------TCCCCT-CTCT------TAT----A----CTCTCTTTT-------C---------------GTGACATTTAG---------------CCGC------------------------TGAATGACGTCGTCG---CCGGCAA---TTTTTCAACAATTAAAAGA-A----AAAAAAAACAAATTT-------------------------------ATCAGA----CC-----ACCA------CAGCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................CTTGAAGATACAGAAA--------CAA-----------------------------------------AATTGT.............................................................................................................................................................................................................................................................................................................................................................2511.0010000010
..............................................................................................................TGTG--TG----T----GT--------------GCGTG--------TG--TG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000100
.................................................................................................................G--TG----T----GT--------------GCGTG--------TG--TGTGA----------------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510001000
droYak3
GAA-GAG---G----------------AAGAAG---GA--------GAAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--TG----T----GCGTGT----GTGCGTGTGTG--------TG--TGTGA----------------------GTGCGTATCTCGAAGATACAGAAA--------CAA-----------------------------------------AATTGTG-TTAAATTAAGACACT-TT-------------------------------------------------------TCCG------CT----C---------TTTCCCCT-CTTT------GGT----A----CTCTCTTTT-------C---------------GTGACATTTAG---------------CCGC------------------------TGAATGACGTCGTCG---CCGGCTA---TTTTTCAACAATTAA----CCAAAAAAAAAAAGCAAATTT-------------------------------ATC-GA----CG-----AC--------CA-CASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
GGAGGAG---AA----------AGAAGAAGAAG---AA--------GAAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGAG--TG----T----GT----------GC--TTGTG--------TA--TGTGA----------------------GTGCGTATCTTGAAGATACAAAAA--------CAA-----------------------------------------AA-TGTG-TTAAAATAAGACACT-TT-------------------------------------------------------TCCG------CT----C---------TTTCAT----T------------CTCGCTCTCTCTCATTT-------C---------------GTGACATTTAG---------------CCGC------------------------TGAATGACGTCGTCG---CCGGCAACAATTTTTCAACAATTAATTAACCAA----AAA---------A----------------------------TAGATCGGT----CG-----AC--------CAGCTSizeHit CountTotal NormTotal
No Reads
droBia1
GGAGGAG---AA----------ATATTAAAGAG---AA--------GAAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--TG----T----GT----------G----TGTG----AGTGTG--TGAGA----------------------GTGCGTATCACGAAGATACAACAA--------CAA------------------------------------------ATTGTG-TTAAAATAAGACACT-TT-------------------------------------------------------TCCG------CT----C---------TTTCTCCG-CTCA------CTT--ACT----CTCTCTCCT-------C---------------GTGACATTTAG---------------CCGC------------------------TGAATGACGTCGCCTTCGCCGGCGA---TTCTTCAACAATTAATTAACCAA----AAA---------T-------------------------------ATCGGA----CG-----AC--------CAGCTSizeHit CountTotal NormTotal
No Reads
droTak1
GGAGAAA---TA----------ATAAGAAGAAG---AA--------GAAGCAG-------CAGCAGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--AG----T----------------------GAG--------TG--TGTGA----------------------GTGCGTATCATGAAGAAACAAAAA--------CAA-----------------------------------------AATTGTG-TTAAAATA---CACT-TT------------------------------------------------------TTCCT------C---------------TCTCTA------T------TTT----ACTCTCTCTCTGCT-------C---------------GTGACATTTAG---------------CCGC------------------------GGAATGACGTCGTCGTCGCCGGCAA---TTCTTCAACAATTAATTAACCAA----AAA---------T-------------------------------ATCGGA----CG-----AC--------CAGCTSizeHit CountTotal NormTotal
No Reads
droEle1
GGAGGAG---AA----------GTAGGAAGAAG---AA--------GAAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--TG----T----GTGTGTGTGTGTG------TG--TGTGTGCT--TGAGA----------------------GTGCGTATCTTAAAGATACAAAAA--------CAA-----------------------------------------AA-TGTG-TTAAAATAAAACATT-TT-------------------------------------------------------TCCG------CT----C---------TTTCTTCG-CTCT------TTT--TCA----CTCTCTTCT-------T---------------GTGACATTTAG---------------CCGC------------------------GGAATGACGTCGTCG---CCGGCTA---TTTTTCAACAATTAATTTACCAA----AAA---------A-------------------------------ATCCGT----CGAGCAGAC--------CAGCTSizeHit CountTotal NormTotal
No Reads
droRho1
GGAGGAG---AA----------GCAGGAAGAAG---AA--------GAAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--TG----T----------------------GTG--------TG--TCAGA----------------------GTGCGTATCTTGAAGATACAAAAA--------CAA-----------------------------------------AA-TGTG-TTAAAATAAGGCACT-TT------------------------------------------------------TTCCG------CT----C---------TTTCTTCT-CTCT------TTT--TCA----CTCTCTTTT-------T---------------GTGACATTTAG---------------CCGC------------------------TGAATGACGTCGTCG---CCGGCTA---TTTTTCATCAATTAATTAACCAA----AAA---------A-------------------------------ATCAGA----CG-----AC--------CAGCTSizeHit CountTotal NormTotal
No Reads
droFic1
GAAGG----------------------AAGGAG---AA--------GAAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATATA--CG----T----GAATGTGT--GTG----TGTG----TGTGTG--CGAGA----------------------GTGCGTATCTCAAAAGTACAAAAA--------CAA-----------------------------------------AATTGTG-TTAAAATAAGATACT-TT-------------------------------------------------------TCCG------CT----C---------TT------------------TT----A----CTCTCTATT-------C---------------GTGACATTTAA---------------CCGC------------------------TGAATGACGTCGTCG---CCGGCAA---TATTTCAACAATTAATTAACCAA----AAA---------A-------------------------------GTCGGA----CG-----GC--------CAGCTSizeHit CountTotal NormTotal
No Reads
droKik1
GAAAGAA---GC----------AGA-GGCGTAG---CA--------GAAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGTG--TG----T----TGGAGTGTTGGTGTTTGTGTG--------CG--TGTGA----------------------GTGCGTATCCA----ATGCAA-------------A-----------------------------------------AAATGTT-TTAAAAAAAGCCACT-A----AA---CTTGAGCAAATCAC--------------------------------TTCCTTC-------------AACGC--TCTCCG---C-------------ACCACTCCCTCTCTCTT-------C---G-------GCGAGTGACATTTAG---------------CGGC------------------------GGAATGACGTCGTCG---CCGGCAG---TTTTTGAACAATTAATTAACCAA----AAA---------T--------------------------------T--------CG-----GC--------CAGCTSizeHit CountTotal NormTotal
No Reads
droAna3
GGCGGAG---GA----------AGAA---GAAG---AAGAGCACCA-GAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGCCAATG----TGTGTGTGTGTGTGTGTG------TG--TGTG--TGTGTGAGTGTGTGTTCTCTCGTAGGTGTGAGTGCGTATCTCAAAGATACGAAAAGTCCAATACAA------------------------------------------ATAGTTTTTAAAAAAAGATACG-T-----------------------------G------------AAGG------TGCTTCCGTTTCACTCTCCT-CTCGCGCTCTCTCTC----T------------------------CTCTCTCTCTCTCTCTGTCT---CGAGTGTGACATTTAA---------------CA----------------------------AAT---------G---CCGGCAA---T-----AAAAAAAAA----AC----AAAAAGAA-ATATTTGATTTGATTCTCATTATTCGCTC------------GATGATCG-----TG--------CAGCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................GAAG---AAGAGCACCA-GAGC-------------AGCGC---------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.................................................................................................................CAATG----TGTGTGTGTGTGTGTGTG------TG--T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.331000001
......................................................................................................................................TGTGTG------TG--TGTG--TGTGTGAGTGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.255500000
..........................................................................................................................................TG------TG--TGTG--TGTGTGAGTGTGTGTTCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.222000002
......................................................................................................................................TGTGTG------TG--TGTG--TGTGTGAGTGTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................26190.214100003
.....................................................................................................................G----TGTGTGTGTGTGTGTGTG------TG--TGTG--T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000001
.................................................................................................................................GTGTGTGTGTG------TG--TGTG--TGTGTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAA----AC----AAAAAGAA-A....................................................................18200.051001000
.......................................................................................................................................GTGTG------TG--TGTG--TGTGTGAGTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000001
...........................................................................................................................................G------TG--TGTG--TGTGTGAGTGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAA----AC----AAAAAGAA-A....................................................................20200.051010000
...........................................................................................................................GTGTGTGTGTGTGTGTG------TG--TGTG--T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000001
.........................................................................................................................................GTG------TG--TGTG--TGTGTGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
droBip1
GGAGCAA---GA----------AG---AAGAAG---AAGAGCGCCA-GAGC-------------AGCGC---------AGCCGGATTTGCAAAT-----AGGT------ATGCCAACG----T----GTA------TATGTGTGTGTG--------AG--TGTGA----------------------GTGCGTATCTCAAAGATACGAAAAGTCCAATACAA------------------------------------------ATGGTG-TTAAAAAAAGATACATG---AA----------------------TCG------------AAGG------CGCTTCCGTTTCA-CT----C---GAGCTCTCTCTC----C------------CCCATTCTCTCTCTCTC-------T---------------GTGACATTTAA---------------CA----------------------------AAT---------G---CCGGCAA---TA----AAAAACAAA----AA----AAAAACGATATATTTTATTTGATTTTCATTATTCGACC------------AACGATCG-----TG--------CAGCTSizeHit CountTotal NormTotal
No Reads
dp5
CGAAGAG---TG----------ACGAC---AAG---AA--------GAAGC-------------AGCGCAGTCAACGCAGCCGGATTTGCAAATAATAGAGGT------ATGTG--TG----T----GTTA------GTACGTGTGTG--------TG--TATAC----------------------ATGCGTATCGCTAAGATACAAA------------------------------------------------------GATTTTG-TTAAAAAAAGACACT-GC---------CT------------AATCTC------------CAATCGCCTCCGCTTCCG------------------------------------------ATGCTCA----CTCTC---T-------T---------------GTGACATTTAGA---AATCAATTTGGTTGCTCTCTCTCTCTCTGCAGCAGCAGCC----GACTGCGACG---CCAGCAG---CATTTTCGCATGACG----TC----GAAAGCAGCAG---C--------------------AGC---AGCAGAT--------CGTGCTGAG--------CAG--SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---C--------------------AGC---AGCAGAT--------CGTGCTGA..............2111.0010100000000
........................................................................CAACGCAGCCGGATTTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGCAG---C--------------------AGC---AGCAGA...............................19200.0510000100000
droWil2
GAAACAG---CAGCAGCGACGAACAA---GAAG---AA-----------GAC-AAACTGGCAACAGCGCAGCCAACGTCAAGATATTTGCAAATCAAATTGGT------ATGCG--TG----T----A----------------TGTG--------TG--TACGA----------------------GTGCGTATCTCAGACATACATATA--------CAAGCATATATACATATATATATATATTTATATGTATGCAAAACGATTGTT-TTAAATAAAGATCTT-TTGCTAACAATTTGGCTAAA--------------------------C------TGTTTCCGTTATATTT---------TGCTCTATCTC----T------------CTCA----CTCTTTGTTGTTC---TGTCACTCTAACGCATGTGACATTTAG---------------CCAG------------------------CGAATGACGTCGTCG---TCG--------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................ATTGGT------ATGCG--TG----T----A----------------TGTG--------T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.................GACGAACAA---GAAG---AA-----------GAC-AAACTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.....AG---CAGCAGCGACGAACAA---GAAG---AA-----------GAC-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
droVir3
GGGACAC---G----------------AAGAAG---AA--------CAAGC-------------A--GC---------AGCCGGATTTGCAAAA-----AAATGTGAGTATTTA--TTTAGAC----A--------TAAGTATGTGTG--------CG--TGAGT----------------------GTGCGTATCTGTG----------------------------------------------------------------AGCGTG-TTAAAAAAAGATC-ATG---CAACTATTTGGCCAAGACACGCATTCG------------CATTCGCCTCCGCTTCCG------TTCTTT-T--TCGTTTTTTTT-------------------TTG----TTTTTTTTT---TTTTTGTTGCTT---TTTATTTGACATTTAAATTTGACAAATTTGGCCGC--------------------------------------------------------------------------------------------------------------------------------------A-----GCCGCAATCTCGGCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................................CCTCCGCTTCCG------TTCTTT-T--TC............................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................ACACGCATTCG------------CATTCGCCTC......................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................G---AA--------CAAGC-------------A--GC---------AGCCGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
...............................AG---AA--------CAAGC-------------A--GC---------AGCCGGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TTTTTTT-------------------TTG----TTTTTTTTT---TT...........................................................................................................................................................................................................21200.102000200000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................GTATGTGTG--------CG--TGAGT----------------------GTA............................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
GAGGGAGCCGAA---GC-----AGAAGAAGAAG---AA--------GAAGCAG----------CA--GC---------AGCCGGATTTGCAAATAA----AGT--AAGTATTTA--TTTAGGC----A--------TATGTGTGTGAGAGTGAGAGGA--GGAGT----------------------GTGCGTATCTGTG----------------------------------------------------------------AGCGTG-TTAAAAAAAGATC-ATG---CAACTATTTGGCCAAGACACGCATTCACATTCGCACTCGCACTCGCCTCCGCTTCCG------TT----T---------GTTTTATTTTTTT------TTT----A----TT----------------TCGCTT---TTCATGTGACATTTAA---------------A--T------------------------TTAACAAATTCGCCC---TCGGCCA---GTC-----------------------------------------------------------CA-------ATT-------GG-----AA--------CAGCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................GAAGCAG----------CA--GC---------AGCCGGATTTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
....................................................................................................................................................................................................................................................................................................................................CACTCGCACTCGCCTCCGCTTC................................................................................................................................................................................................................................................................................2211.001100000
..........................GAAGAAG---AA--------GAAGCAG----------CA--GC---------AGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.501000001
droGri2
GAGATAG---AA----------A-ATCAAGAAG---AA--------GAAGCAA----------CA--GC---------AGCCGGATTTGCAAAT-----AAA-GTGAGTATTTG--GG----C----AT--------------GTGTG--------TG--TGTGA----------------------GTGCGTATCTGTG----------------------------------------------------------------AGCGTG-TTAAAAAAAGATC-ATG---CAACTATTTGGCCAAGACACGCATTCG------------CATTCGCCTCCACTTCCG------TTATTTTATTTCATTTTATTTA----TATTTTTTTTCT----G----CTCGCTTTT--------------------CATGTGACATTTAAATTTGACAAATTTGGCCGCAGTCGCAGTCTCTACGTCGGC-----AGAGGCAGCGCAG---CCAGCAA---ATCTAA------------------------------------CTTAATCACG----TTTGACCAAA--TGGCTC-----ATTA-----AA--------AAGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................AGAAG---AA--------GAAGCAA----------CA--GC---------AGCCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACGTCGGC-----AGAGGCAGCG.......................................................................................................................2111.00110
.................................................GCAA----------CA--GC---------AGCCGGATTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.33110

Generated: 05/19/2015 at 02:33 PM