ID:

dsi_29685

 Coordinate:

3r:21827606-21827755 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.9 -11.6 -11.5

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
(CA)nSimple_repeatSimple_repeat+
mature
star
  1. 2l:4256784-4256801 -
  2. 2l:5098798-5098815 -
  3. 2l:9309025-9309042 -
  4. 2l:16790061-16790078 -
  5. 2r:9596175-9596192 -
  6. 2r:11535713-11535730 -
  7. 2r:13910421-13910438 -
  8. 3l:19548033-19548050 -
  9. dsi_18583  3r:2290574-2290591 -
  10. 3r:2787480-2787497 -
  11. 3r:7022235-7022252 -
  12. 3r:17947956-17947973 -
  13. dsi_29685  3r:21827701-21827718 -
  14. x:1494821-1494838 -
  15. x:8788442-8788459 -
  16. x:11410086-11410103 -
  17. x:12132873-12132890 -
  18. x:13485453-13485470 -
  19. x:15206181-15206198 -
  20. dsi_12144  node_24415:79000-79017 -
  21. 2l:9580112-9580129 -
  22. 2l:10897131-10897148 -
  23. 2l:11362342-11362359 -
  24. 2l:19210360-19210377 -
  25. 2r:3876258-3876275 -
  26. 2r:5624979-5624996 -
  27. 2r:10316306-10316323 -
  28. 2r:15488063-15488080 -
  29. 3l:2117888-2117905 -
  30. 3l:6556010-6556027 -
  31. 3l:10921777-10921794 -
  32. 3l:12686519-12686536 -
  33. 3l:12937733-12937750 -
  34. 3l:16873906-16873923 -
  35. 3l:19694596-19694613 -
  36. 3r:873458-873475 -
  37. 3r:21573411-21573428 -
  38. 3r:22548832-22548849 -
  39. x:9850222-9850239 -
  40. x:15580829-15580846 -

Sense Strand Reads

GGCGAAATAACAAGAAACTGGAGGCGCAGCAAAGCACAAAAAAGCGTAAAGTGCGTGTATGTGTGCGAGTGGGAGTGCGTGTGCGTTTGTGTGTGTGTGTGGGTGGCATCAGTATTTGAAAATTGAGAAATTCCAAACAAACAAAGCGGCAAAAAGGATATACGAATGTATGTAGCATAGGAAAAACTCCAAGTACAGTAGTTGCTGCTGCTTCTTGTTCACGCAAAAGGCAAAAACGCAAAAAAGCAAA
***************************************************************************************(((.(((.(((.((((.....(((((........))))).....)))).))).)))..)))......................******************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR1275485
Male prepupae		 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M053
female body
 SRR902009
testis
 M025
embryo
 SRR1275487
Male larvae		 SRR553485
Chicharo_3 day-old ovaries
..................................................................................................GTCGGGGGCATCAGTATT...................................................................................................................................... 18 2 1 6.00 6 3 1 1 0 1 0 0 0 0 0 0 0
..................................................................................................GTCGGGGGCATCAGTATTC..................................................................................................................................... 19 3 13 3.92 51 38 10 0 0 0 0 0 2 0 1 0 0
...........................................GCGTAAAGCGCGCGTAGGT............................................................................................................................................................................................ 19 3 5 1.20 6 0 0 2 3 0 0 1 0 0 0 0 0
..................................................................................................................................................CGGCAAAAAGGATATACGAATGTA................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TAGCACATTGAGAAATTCCAAA................................................................................................................. 22 3 5 0.40 2 0 0 2 0 0 0 0 0 0 0 0 0
...............AACTGGAGGCGCAGC............................................................................................................................................................................................................................ 15 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................GCGTAAAGCGCGTGTA............................................................................................................................................................................................... 16 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................GGTCGGGGGCATCAGTATT...................................................................................................................................... 19 3 18 0.28 5 1 0 0 0 0 0 0 3 0 0 1 0
.......TAAAAAGAAACTGGAGGCA................................................................................................................................................................................................................................ 19 2 8 0.25 2 0 0 0 2 0 0 0 0 0 0 0 0
............................................CGTAAAGCGCGCGTAGGT............................................................................................................................................................................................ 18 3 18 0.22 4 0 0 1 1 0 0 2 0 0 0 0 0
...........................................GCGTAAAGCGAGTGTAGGT............................................................................................................................................................................................ 19 3 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................TCGGGGGCATCAGTATT...................................................................................................................................... 17 2 11 0.09 1 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................TAGGTTGCATAGGAAAAA................................................................ 18 2 13 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................ATGTGTGCGAGTCGG................................................................................................................................................................................. 15 1 17 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................GGCGTAAAGTGCGCGTA............................................................................................................................................................................................... 17 2 18 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................ATGTGTGCGAGTCGGCG............................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................TGTGTGTGTGTGTGGGTG................................................................................................................................................. 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CCGCTTTATTGTTCTTTGACCTCCGCGTCGTTTCGTGTTTTTTCGCATTTCACGCACATACACACGCTCACCCTCACGCACACGCAAACACACACACACACCCACCGTAGTCATAAACTTTTAACTCTTTAAGGTTTGTTTGTTTCGCCGTTTTTCCTATATGCTTACATACATCGTATCCTTTTTGAGGTTCATGTCATCAACGACGACGAAGAACAAGTGCGTTTTCCGTTTTTGCGTTTTTTCGTTT
********************************************************************************(((.(((.(((.((((.....(((((........))))).....)))).))).)))..)))......................*************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR618934
dsim w501 ovaries
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
..................................................................................CGCAAACACACACACACACC.................................................................................................................................................... 20 0 3 1.00 3 3 0 0 0 0
...................CCCCCGCCTCGTTTAGTGTT................................................................................................................................................................................................................... 20 3 11 0.18 2 0 2 0 0 0
...............................................................................................................................................................................................TCAAGTCATTAACGACGA......................................... 18 2 17 0.12 2 0 0 2 0 0
..........................................................................................................................................................................ACCTCGTATCCTCTTTG............................................................... 17 2 17 0.06 1 0 0 0 1 0
..............TTTGACCTCCACGTCGTCT......................................................................................................................................................................................................................... 19 2 19 0.05 1 0 0 0 0 1
..........................................................................................................................AGCTCTTTAAGGTTGGT............................................................................................................... 17 2 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:21827556-21827805 - dsi_29685 GGC---G--AAA--TAAC---AAGAAACTGG---A---GGCGCAGCAAAGCA---CAAAAAA---------GCGTAA------------AGTGCGTGT------------ATGTGT--G-------CGAGTGGGAGTGCGT---GTGC----------G--TTTGT--------GTG--TGTGTGTGG-------GTGGCA----------------TCAGTATTTG------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCGGC-------------AAA-AAGG---------------------ATATACGAATGTATGTAG----CATAG-G-------------AAAAACTC--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GCTGCTTCTTGTT-C-A-CGCAAAAGG--------------C-------------------------------------------------------AAAA-----------ACGCA-----------AAAA------AGCA-----AA
droSec2 scaffold_13:1142988-1143235 - GGC---G--AAA--TAAC---AAGAAACTGG---A---GGCGCAGCAAAGCA---CAAAAAA---------ACGTAA------------AGTGCGTGT------------ATGTGT--G-------CGAGTGGGAGTGCGT---GTGC----------G--TTTGT----------G--TGTGTGTGG-------GTGGCA----------------TCAGTATTTG------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCGGC-------------AAA-AAGG---------------------ATATACGAGTGTATGTAG----CATAG-G-------------AAAAACTC--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GCTGCTTCTTGTT-C-A-CGCAAAAGG--------------C-------------------------------------------------------AAAA-----------ACGCA-----------AAAA------AGCA-----AA
dm3 chr3R:22360244-22360495 - GGC---G--AAA--TAAC---AAGAAACTGG---A---GACGCAGCAAAGCA---CAAAAAA---------GCGTAA------------AGTGCGTGT------------ATGTGT--G-------CGAGTGGGAGTGCGT---GTAC----------G--TTTGT--------GTGTGTGCGTGTGG-------GTGGCA----------------TCAGTATTTG------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCGGC-------------AAA-AAGG---------------------ATATACGAATGTATGTAG----CAAAG-G-------------AAAAACTC--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GCTGCTTCTTGTT-C-A-CGCAAAAGG--------------C-------------------------------------------------------AAAA-----------ACGCA-----------AAAA------AGCA-----AA
droEre2 scaffold_4820:5690896-5691143 + GGC---G--AAA--TAAC---AAGAAACTGG---A---GACGCAGCAAAGCA---CAAAAAA---------GCGTAA------------AGTGCGTAT------------GTGTGTGTG-------CAAGTGGGAGTGCG-----------------------------------TG--TGTGTGTGG-------GTGGCT----------------TCAGAATTTG------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCGGC-------------AAA-AAGG---------------------ATATACATATGTATGTAG----CAAGG-G-------------AAAAACTC--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GCTGCTTCTTGTT-C-A-CGCAAAAGG--------------CAAA---------------------------ACGCAA-------A-----------AAAA-----------ACGC-------------AAA------AGCA-----AA
droYak3 3R:24134171-24134452 + GGC---G--AAA--TAAC---AAGAAACTGG---A---GACGCAGCAAGGCA---CAAAAAA---------GCGTAA------------AGTGCGTGTGCGTGTGTGTGTGTGTGT--G-------CGAGTGGGAGTGCGTATTGTG--------------TGTGT------GTGTG--TGTGTGTGG-------GTGGCT----------------TCAGTATTTG------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCGGC-------------AAA-AAGG---------------------ATATACATATGTATGTAG----CAAGG-A-------------AAAAACGC--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GCTGCTTCTTGTT-C-A-CGCAAAAGG--------------C-------------------------------------------------------AAAA-----------ACGCAAAAAAAAAACTCAAAGGCAAAGGCA-----AA
droEug1 scf7180000409682:228046-228277 + GCG---A-AAAA--CAAC---AAGAAACTGA---A---GGAGAAGCAAAGAAC--CAAAGAA---------GCGTAA------------AGTGCGTAG------------ATGTGT----------------------------GTGC----------G--T------------------TTGTGTGG-------GTGGCT----------------TGAGTATTTG------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCGGC-------------AAA-A------------------AAAAGGATATG--------TGTAG----TAAAG-G-------------AAAAACAC--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GC---TTCTTAT--C-C-CGCAAAAGG--------------C-------------------------------------------------------AAAA----GC-----A-ACA-GAAAAACATCTAAAAG----TAAA-----AA
droBia1 scf7180000302113:2600626-2600933 - GCC---G--AAA--AAGC---AG----------------------------------------------------AA------------AGT---------------------------------------------------------------------------------------------------------GGCT----------------GGCGCAGTTG------AAAG---------------------TTGCGAAGTTGCAAGCAAACAAAGCGGCTC-----------GAA-AAGG---------------------ATGTG--------CGTAG----TGGCG-A---AGAGC-----CGAAGGTA--------CAGGTAGCGTGCTAGCAGGGCCGTTCCAAACAAAAGCTGTGCTGTGCCCGCAGAAAGCAAAATCAGCCAAAAAGCAAAAGCAGACAAAAGCAAAATCAGCCAAAAGCAAAATCAGCCAGAAGCAAAATCAGCCAGAAGCAAAATCAGCCAGAAGCAAAAT------------------------C-A-GCAAAGAG---------------CAAA-------------------------CTCCGCCAAAAGC--------------AGAA-----------TCAGA-----------CAAA------AGCA-----AA
droTak1 scf7180000415712:260065-260258 - GAGGTAAAAAAA--TAAC---AAGAAGCTGG---C---GGGGAGGCAAAGTA---CCGAAA---------------A------------AGTGCGTGA------------AT----------------------------------------------------------------------GTGTGG-------GTGGC-----------------TGAGTACTTG------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCGGC-------------AAA-AAGG---------------------ATGTG--------CGTAG----TAAAG-C-------------AAAGACAC--------CAAGTACAGTAGTTAT------------------------------------------------------------------------------------------------------------------------------------------------------T---A-------------C-C-CGCAAAAAG-------------CCG------------------------------------------------------AAAA-----------ACCAA-----------AAAA------AACA-----AA
droEle1 scf7180000491280:385508-385702 - GAA---A--AAATATAAC---AAGACACAGA---A---G------------------------------------AA------------AGTGCGTGT--------------------------------------------------------------------------------------------------------------------------GTA-TTG------AAAA---------------------TTGAGAAATGCCAAACAAACAAAGCGGC-------------AAAAAAGG---------------------ATATA--------TGCGG----TAAAG-GAAAAGTACCGAAGAAAAACAA--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GCTTCTTATTGCC-C-A-CAAAAAAG---------------CAAA-------------------------GAACTCAAAAAGC--------------AAAT-----------ACACT-----------AAAA------AGCA-----AA
droRho1 scf7180000778271:23433-23634 - GGG---A--AAA--TAAC---AAGAAACTGA---A---GATG--GTAAAGCCC--CAAAAAA---------GCAGAA------------AGTGCGTGT--------------------------------------------------------------------------------------------------------------------------GTATTTG------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCGAC-------------AAAAAATG---------------------AAATA--------TGTAG----AAGAG-GAAAAGTACAAAAGAAAAATAA--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GCTTCTTATCGCC-C-A-CAAAAAAG---------------CA------------------------------------------------------AGGA-----------ACTTA-----------AAAA------GCAA-----AT
droFic1 scf7180000454055:2253628-2253884 - GAG------AAA--TAACTGGAAGAAACTGG---A---GAG---GCAAATAC---CAAAAAA---------GCTGAA------------AGTGCGTGC------------TTG-------------------------CGC---GTGT----------T--T--T----------TG--TGTGTGTGG-------GTGGCT----------------TGAGTATTTG------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCGGT-------------AAAAAAGG---------------------ATATG--------TGTAG----CAAAG-GAAAAACTCCATAGTAAAACAA--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GCTCCTTCTTATTGC-C-CGCAAAAAT-------------ACAAA-----------------------------------ATACAATTCAATACAATAAAA-----------ACGCC-----------GAAA------AGCA-----AA
droKik1 scf7180000302475:643796-644035 - AGA--------A--TAAC---AAGACGGCGGCAAAGAAGAAGCAGC---CGA---AAAAGAGACTAAAAGTGCGTGG------------AGTGCGTGG------------GAGTGTGTG----------------------------TGTGTGCGAGAGCCTTTGT--------GTGCCTTTGTGGGG-------GTGGCA----------------AAAATACTTA------AAAA---------------------CTGCCGAATTCCAAACAAACAAAGCCAGCC-----------CGA-AAGGATAA--------AGGAATAGAAAACA--------AAACAAAAGAAAAG-A-------------AAAGACAA--------CAAGTACAGTAGTTAA------------------------------------------------------------------------------------------------------------------------------------------------------A---G----------------------------------------C-------------------------------------------------------ATGA-----------GCCCA-----------AA-----------G-----AA
droAna3 scaffold_13340:22298977-22299254 + AGA---A--AAT--AACC---AAGAAGAAGA---A---GAAGCAGAAGAAGA-AAGCCAGAGACGCCAAGTGCGTAA------------CATGCGTGT------------ATG-------------------------AGT---GTGT----------G--T--G----------TG--TGTGTGGGG-------GTGGCCAAAAAAAAGTCTAGAATGAATATTTT------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCACA----GGACAGGACAAAAAAGG---------------------ATATG------------A----TAAAG-GAAAGCCACA-------AAAAA--------CTAGCACTGTAGGC--------------------------------------------------------------------------------------------------------------------------------------------------GGCTACT---TCTTCCTCTTCTT-C-A-CGCAACGGG-------------GCA-----------------------------------AAAGAAAAAGC--------AACA-----------CAAAA-----------AAAA------AACC-----CA
droBip1 scf7180000396721:853936-854202 - AGA---A--AAA--GTCC---AAGAAGA------A---GA---------------GCCAGAGACGCCAAGTGCGTAA------------CGTGCGTGT------------GTG------------------GCGCTTGCGT---TTGT----------A--TTTGT--------ATT--TGTGCGGGG-------GTGGCCCGCACAGAGTCTAGAATGAATATTTT------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCTGC-------------CAAAGA-----------------AAAAGGATATG------------A----TAAAG-GAAACCAACA---AAAAAAGAA--------CTACTCCTGTAGGC--------------------------------------------------------------------------------------------------------------------------------------------------GGCTGCTTCCTCTTCTTCTTCTT-C-A-CGCAACGGG--------------CA-----------------------------------AAAGA--------------AAAG-----------CCAAA-----------AAAA------AACC-----AA
dp5 2:7907944-7908167 - ATA---G--AGT--TAGT---GAGAAAGAGGG--A---GA----G----------GAAAGAT---------ACGCCA------------AGTGCGTGC-------------TGAGG---------------GGGAGTGCA----------------------------------------------------------------AAAAAGTGAGAAATGAATATTTT-----AAAAC---------------------TCGAAAAATTCCAAACAAAGCAAACTCCTCCACCAC------------TCCA---------AAAAAAAGGATATG--------AAACGCAA-TAAAAAC------A--------TGAC------CGCCAAAGTACAGTAGTTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCTT-CCACCACGGATGG--------------T-------------------------------------------------------AGGC-----------AGGCA-----------GGCA------GTCA-----GG
droPer2 scaffold_0:1741819-1742029 - AAA---G--ATA--CG----------------------------------------------------------CCA------------AGTGCGTGC-------------TGTGG---------------GGGAGTGCA----------------------------------------------------------------AAAAAGTGAGAAATGAATATTTT-----AAAAC---------------------TCGAAAAATTCCAAACAAAGCAAACTCCTCCACCAC------------TCCAA--------AAAAAAAGGATATA--------AATCGCAA-TAAAAAC------A--------TGAC------CGCCAAAGTACAGTAGTTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCTT-CCACCACGGATGGTAGGCAGGCCAGG-C-------------------------------------------------------CAGG-----------CAGGC-----------AGGC------AGTC-----AG
droWil2 scf2_1100000004909:10758883-10759024 + AGA---G--AAA--AAAG---AAGAAAA------A---GACGCACTAAAGGA-AACATGAAT---------GCATAA------------GGTGTGGGT------------GTGTGT--G-------TGTGTGTGTGTGTGT---GTGT----------GTGTGTGT--------GTG--TGTTTGTGT-------GTG-------------------------------------------------------------TGAAAAGTTAACTGCAGAAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-------------AAA------AAAA-----AT
droVir3 scaffold_12932:915259-915511 - CTC---G--AGC--GTAA---GCGGG--------A---G------C-----------TTTGCA---------CTTAAAGTTTGTTTCTAAGCTCGACT------------TTGT----GTTTGTTGCTGCAGCGCTTGCGT---GTGT----------T--T--GT----GTGTGTG--TGGGAGTGG-------GCGTCA----------------ACAGTTACTG------GCAG----------------------TGGGCAGCTCCAAGAAGAA-----GGC-------------AAG-ACGC------------------A--GTTTTTTATTTTTTGTTG----CCAGC-C-------------AAAAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCAATTTACTGTTGCTGCTGCTGCCGACTGCAACAAC--------------AACTACAAGAAGAAGAAGAA-----------GAAG------AACG-----AA
droMoj3 scaffold_6540:25659077-25659292 - AAA---G-------------------------------------------CC---CGCAAAA---------TGGTTG------------AGTATGCAT------------GTGTGT--G-------TGTGTGTGCGTGTGT---GTGT----------G--TGTGTGTGTGTGTGTG--TACGTATCA-------GTGTTG----------------CCAGCTGTTGAGCCTTGAAATAGTTGATTTGTGGATAAAAGTAGGGTAAAGCTAAAAGAGGCTAAAA-------------------ACGG---------------------CTATA-------------------------------------ACAAGCTT--------AAAATATGGGAATAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTGTTGGATGA--------------AAAA-----------ATGAA-----------ATGA------AGCA-----AA
droGri2 scaffold_14830:4609757-4610003 + GCA---T--CAC--AACA---AAGA-----------------------------------------------AATCA------------AGTGCGTGCCGACGTGTGT--ATG-------------------------TGT---GTGT----------G--T--G----------TG--TATGTATGGATCGGGGGT----------AAATATGAAATGAATATTTT------AAAA----------------------TGAGAAATTCCATGCAAACAACACGGC-------------CAAAGATG----GCAAACAAAAAAAAAGGATATG--------AAACGCAA-TAAAG-CC-----AAC-------GATTGCTGCCGC-CAAGTACAGTAGTAGT----------------------------------------------------------------------------------------------------------------------------------------------------------AGTTCTTCTTCTT-C-G-GCC---AGG-------------CCA------------------------------------------------------CAAA-----------GCCAG-----------CAGC------AGCAGCGGTAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GGC---G--AAA--TAAC---AAGAAACTGG---A---GGCGCAGCAAAGCA---CAAAAAA---------GCGTAA------------AGTGCGTGT------------ATGTGT--G-------CGAGTGGGAGTGCGT---GTGC----------G--TTTGT--------GTG--TGTGTGTGG-------GTGGCA----------------TCAGTATTTG------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCGGC-------------AAA-AAGG---------------------ATATACGAATGTATGTAG----CATAG-G-------------AAAAACTC--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GCTGCTTCTTGTT-C-A-CGCAAAAGG--------------C-------------------------------------------------------AAAA-----------ACGCA-----------AAAA------AGCA-----AASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................CGGC-------------AAA-AAGG---------------------ATATACGAATGTA............................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000000000
.........................AACTGG---A---GGCGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1530.33100000000001000000
...................................................................................................................................................................TGT--------GTG--TGTGTGTGG-------GTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000010000000000
droSec2
GGC---G--AAA--TAAC---AAGAAACTGG---A---GGCGCAGCAAAGCA---CAAAAAA---------ACGTAA------------AGTGCGTGT------------ATGTGT--G-------CGAGTGGGAGTGCGT---GTGC----------G--TTTGT----------G--TGTGTGTGG-------GTGGCA----------------TCAGTATTTG------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCGGC-------------AAA-AAGG---------------------ATATACGAGTGTATGTAG----CATAG-G-------------AAAAACTC--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GCTGCTTCTTGTT-C-A-CGCAAAAGG--------------C-------------------------------------------------------AAAA-----------ACGCA-----------AAAA------AGCA-----AASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..C---G--AAA--TAAC---AAGAAACTGG---A---GGCGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
dm3
GGC---G--AAA--TAAC---AAGAAACTGG---A---GACGCAGCAAAGCA---CAAAAAA---------GCGTAA------------AGTGCGTGT------------ATGTGT--G-------CGAGTGGGAGTGCGT---GTAC----------G--TTTGT--------GTGTGTGCGTGTGG-------GTGGCA----------------TCAGTATTTG------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCGGC-------------AAA-AAGG---------------------ATATACGAATGTATGTAG----CAAAG-G-------------AAAAACTC--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GCTGCTTCTTGTT-C-A-CGCAAAAGG--------------C-------------------------------------------------------AAAA-----------ACGCA-----------AAAA------AGCA-----AASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................ACTGG---A---GACGCAGCAAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000100000
...............................................................................................TGT------------ATGTGT--G-------CGAGTGGGAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTTCTTGTT-C-A-CGCAAAAGG--------------C-------------------------------------------------------....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................GCGTGTGG-------GTGGCA----------------TCAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................ATGTGT--G-------CGAGTGGGAGTGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................................................................................................................................................................................................................................................................................................................................................................ACTC--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GCTGC................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................GGGAGTGCGT---GTAC----------G--TTTGT--------G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................GT--G-------CGAGTGGGAGTGCGT---G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...........................................................................................................................................................................................................................................................................................GGC-------------AAA-AAGG---------------------ATATACGAATGTATG..........................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................CGTGT------------ATGTGT--G-------CGAGTGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................AA-AAGG---------------------ATATACGAATGTATG..........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................................AGTGCGT---GTAC----------G--TTTGT--------GTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................................TGGGAGTGCGT---GTAC----------G--TTTGT--------GTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................AAAGCGGC-------------AAA-AAGG---------------------ATATA....................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................GT---GTAC----------G--TTTGT--------GTGTGTGCGTGTGG-------GT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................C-------------AAA-AAGG---------------------ATATACGAATGTAA...........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................ATGTGT--G-------CGAGTGGGAGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AGAAACTGG---A---GACGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................G--TTTGT--------GTGTGTGCGTGTGG-------GTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................TAA------------AGTGCGTGT------------ATGTGT--G-------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................CGAGTGGGAGTGCGT---GTAC----------G--T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.........................................................................................................................................................................................................................................................................................................................................TATACGAATGTATGTAG----CAAAG-G-------------AAAAAC.........................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AAA--TAAC---AAGAAACTGG---A---GACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-C-A-CGCAAAAGG--------------C-------------------------------------------------------AAAA-----------ACGCA-----------AA...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................AGTGGGAGTGCGT---GTAC----------G--TTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............................................................................................................................................................................................................................................................................................................................................ACGAATGTATGTAG----CAAA...............................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................GCGGC-------------AAA-AAGG---------------------ATATACG..................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................T--------GTGTGTGCGTGTGG-------GTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................AGAAACTGG---A---GACGCAGCAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................TGT--------GTGTGTGCGTGTGG-------GT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
droEre2
GGC---G--AAA--TAAC---AAGAAACTGG---A---GACGCAGCAAAGCA---CAAAAAA---------GCGTAA------------AGTGCGTAT------------GTGTGTGTG-------CAAGTGGGAGTGCG-----------------------------------TG--TGTGTGTGG-------GTGGCT----------------TCAGAATTTG------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCGGC-------------AAA-AAGG---------------------ATATACATATGTATGTAG----CAAGG-G-------------AAAAACTC--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GCTGCTTCTTGTT-C-A-CGCAAAAGG--------------CAAA---------------------------ACGCAA-------A-----------AAAA-----------ACGC-------------AAA------AGCA-----AASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................AAACTC--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GC...................................................................................................................................................2511.0010000100
..........................................CAGCAAAGCA---CAAAAAA---------G.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
droYak3
GGC---G--AAA--TAAC---AAGAAACTGG---A---GACGCAGCAAGGCA---CAAAAAA---------GCGTAA------------AGTGCGTGTGCGTGTGTGTGTGTGTGT--G-------CGAGTGGGAGTGCGTATTGTG--------------TGTGT------GTGTG--TGTGTGTGG-------GTGGCT----------------TCAGTATTTG------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCGGC-------------AAA-AAGG---------------------ATATACATATGTATGTAG----CAAGG-A-------------AAAAACGC--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GCTGCTTCTTGTT-C-A-CGCAAAAGG--------------C-------------------------------------------------------AAAA-----------ACGCAAAAAAAAAACTCAAAGGCAAAGGCA-----AASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
GCG---A-AAAA--CAAC---AAGAAACTGA---A---GGAGAAGCAAAGAAC--CAAAGAA---------GCGTAA------------AGTGCGTAG------------ATGTGT----------------------------GTGC----------G--T------------------TTGTGTGG-------GTGGCT----------------TGAGTATTTG------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCGGC-------------AAA-A------------------AAAAGGATATG--------TGTAG----TAAAG-G-------------AAAAACAC--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GC---TTCTTAT--C-C-CGCAAAAGG--------------C-------------------------------------------------------AAAA----GC-----A-ACA-GAAAAACATCTAAAAG----TAAA-----AASizeHit CountTotal NormTotal
No Reads
droBia1
GCC---G--AAA--AAGC---AG----------------------------------------------------AA------------AGT---------------------------------------------------------------------------------------------------------GGCT----------------GGCGCAGTTG------AAAG---------------------TTGCGAAGTTGCAAGCAAACAAAGCGGCTC-----------GAA-AAGG---------------------ATGTG--------CGTAG----TGGCG-A---AGAGC-----CGAAGGTA--------CAGGTAGCGTGCTAGCAGGGCCGTTCCAAACAAAAGCTGTGCTGTGCCCGCAGAAAGCAAAATCAGCCAAAAAGCAAAAGCAGACAAAAGCAAAATCAGCCAAAAGCAAAATCAGCCAGAAGCAAAATCAGCCAGAAGCAAAATCAGCCAGAAGCAAAAT------------------------C-A-GCAAAGAG---------------CAAA-------------------------CTCCGCCAAAAGC--------------AGAA-----------TCAGA-----------CAAA------AGCA-----AASizeHit CountTotal NormTotal
No Reads
droTak1
GAGGTAAAAAAA--TAAC---AAGAAGCTGG---C---GGGGAGGCAAAGTA---CCGAAA---------------A------------AGTGCGTGA------------AT----------------------------------------------------------------------GTGTGG-------GTGGC-----------------TGAGTACTTG------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCGGC-------------AAA-AAGG---------------------ATGTG--------CGTAG----TAAAG-C-------------AAAGACAC--------CAAGTACAGTAGTTAT------------------------------------------------------------------------------------------------------------------------------------------------------T---A-------------C-C-CGCAAAAAG-------------CCG------------------------------------------------------AAAA-----------ACCAA-----------AAAA------AACA-----AASizeHit CountTotal NormTotal
No Reads
droEle1
GAA---A--AAATATAAC---AAGACACAGA---A---G------------------------------------AA------------AGTGCGTGT--------------------------------------------------------------------------------------------------------------------------GTA-TTG------AAAA---------------------TTGAGAAATGCCAAACAAACAAAGCGGC-------------AAAAAAGG---------------------ATATA--------TGCGG----TAAAG-GAAAAGTACCGAAGAAAAACAA--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GCTTCTTATTGCC-C-A-CAAAAAAG---------------CAAA-------------------------GAACTCAAAAAGC--------------AAAT-----------ACACT-----------AAAA------AGCA-----AASizeHit CountTotal NormTotal
No Reads
droRho1
GGG---A--AAA--TAAC---AAGAAACTGA---A---GATG--GTAAAGCCC--CAAAAAA---------GCAGAA------------AGTGCGTGT--------------------------------------------------------------------------------------------------------------------------GTATTTG------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCGAC-------------AAAAAATG---------------------AAATA--------TGTAG----AAGAG-GAAAAGTACAAAAGAAAAATAA--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GCTTCTTATCGCC-C-A-CAAAAAAG---------------CA------------------------------------------------------AGGA-----------ACTTA-----------AAAA------GCAA-----ATSizeHit CountTotal NormTotal
No Reads
droFic1
GAG------AAA--TAACTGGAAGAAACTGG---A---GAG---GCAAATAC---CAAAAAA---------GCTGAA------------AGTGCGTGC------------TTG-------------------------CGC---GTGT----------T--T--T----------TG--TGTGTGTGG-------GTGGCT----------------TGAGTATTTG------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCGGT-------------AAAAAAGG---------------------ATATG--------TGTAG----CAAAG-GAAAAACTCCATAGTAAAACAA--------CAAGTACAGTAGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------T---GCTCCTTCTTATTGC-C-CGCAAAAAT-------------ACAAA-----------------------------------ATACAATTCAATACAATAAAA-----------ACGCC-----------GAAA------AGCA-----AASizeHit CountTotal NormTotal
No Reads
droKik1
AGA--------A--TAAC---AAGACGGCGGCAAAGAAGAAGCAGC---CGA---AAAAGAGACTAAAAGTGCGTGG------------AGTGCGTGG------------GAGTGTGTG----------------------------TGTGTGCGAGAGCCTTTGT--------GTGCCTTTGTGGGG-------GTGGCA----------------AAAATACTTA------AAAA---------------------CTGCCGAATTCCAAACAAACAAAGCCAGCC-----------CGA-AAGGATAA--------AGGAATAGAAAACA--------AAACAAAAGAAAAG-A-------------AAAGACAA--------CAAGTACAGTAGTTAA------------------------------------------------------------------------------------------------------------------------------------------------------A---G----------------------------------------C-------------------------------------------------------ATGA-----------GCCCA-----------AA-----------G-----AASizeHit CountTotal NormTotal
No Reads
droAna3
AGA---A--AAT--AACC---AAGAAGAAGA---A---GAAGCAGAAGAAGA-AAGCCAGAGACGCCAAGTGCGTAA------------CATGCGTGT------------ATG-------------------------AGT---GTGT----------G--T--G----------TG--TGTGTGGGG-------GTGGCCAAAAAAAAGTCTAGAATGAATATTTT------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCACA----GGACAGGACAAAAAAGG---------------------ATATG------------A----TAAAG-GAAAGCCACA-------AAAAA--------CTAGCACTGTAGGC--------------------------------------------------------------------------------------------------------------------------------------------------GGCTACT---TCTTCCTCTTCTT-C-A-CGCAACGGG-------------GCA-----------------------------------AAAGAAAAAGC--------AACA-----------CAAAA-----------AAAA------AACC-----CASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................AAGAAGA-AAGCCAGAGACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGC--------AACA-----------CAAAA-----------AAAA------...........1830.331010000
...............ACC---AAGAAGAAGA---A---GAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331010000
..........................................................................................................................................AGT---GTGT----------G--T--G----------TG--TGTGTGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
droBip1
AGA---A--AAA--GTCC---AAGAAGA------A---GA---------------GCCAGAGACGCCAAGTGCGTAA------------CGTGCGTGT------------GTG------------------GCGCTTGCGT---TTGT----------A--TTTGT--------ATT--TGTGCGGGG-------GTGGCCCGCACAGAGTCTAGAATGAATATTTT------AAAA---------------------TTGAGAAATTCCAAACAAACAAAGCTGC-------------CAAAGA-----------------AAAAGGATATG------------A----TAAAG-GAAACCAACA---AAAAAAGAA--------CTACTCCTGTAGGC--------------------------------------------------------------------------------------------------------------------------------------------------GGCTGCTTCCTCTTCTTCTTCTT-C-A-CGCAACGGG--------------CA-----------------------------------AAAGA--------------AAAG-----------CCAAA-----------AAAA------AACC-----AASizeHit CountTotal NormTotal
No Reads
dp5
ATA---G--AGT--TAGT---GAGAAAGAGGG--A---GA----G----------GAAAGAT---------ACGCCA------------AGTGCGTGC-------------TGAGG---------------GGGAGTGCA----------------------------------------------------------------AAAAAGTGAGAAATGAATATTTT-----AAAAC---------------------TCGAAAAATTCCAAACAAAGCAAACTCCTCCACCAC------------TCCA---------AAAAAAAGGATATG--------AAACGCAA-TAAAAAC------A--------TGAC------CGCCAAAGTACAGTAGTTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCTT-CCACCACGGATGG--------------T-------------------------------------------------------AGGC-----------AGGCA-----------GGCA------GTCA-----GGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTT-CCACCACGGATGG--------------T-------------------------------------------------------AGGC-----------AGGCA-----------GGC..................2912.0020000000002
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGATGG--------------T-------------------------------------------------------AGGC-----------AGGCA-----------GG...................2111.0010000000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGATGG--------------T-------------------------------------------------------AGGC-----------AGGCA-----------GGC..................2111.0010000000001
droPer2
AAA---G--ATA--CG----------------------------------------------------------CCA------------AGTGCGTGC-------------TGTGG---------------GGGAGTGCA----------------------------------------------------------------AAAAAGTGAGAAATGAATATTTT-----AAAAC---------------------TCGAAAAATTCCAAACAAAGCAAACTCCTCCACCAC------------TCCAA--------AAAAAAAGGATATA--------AATCGCAA-TAAAAAC------A--------TGAC------CGCCAAAGTACAGTAGTTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCTT-CCACCACGGATGGTAGGCAGGCCAGG-C-------------------------------------------------------CAGG-----------CAGGC-----------AGGC------AGTC-----AGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
AGA---G--AAA--AAAG---AAGAAAA------A---GACGCACTAAAGGA-AACATGAAT---------GCATAA------------GGTGTGGGT------------GTGTGT--G-------TGTGTGTGTGTGTGT---GTGT----------GTGTGTGT--------GTG--TGTTTGTGT-------GTG-------------------------------------------------------------TGAAAAGTTAACTGCAGAAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-------------AAA------AAAA-----ATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................GTGTGTGT---GTGT----------GTGTGTGT--------GT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200002
.............................................................................................TGGGT------------GTGTGT--G-------TGTGTGTGTGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100001
...................................................................................................................................................T----------GTGTGTGT--------GTG--TGTTTGTGT-------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100001
......................................................................................................................G-------TGTGTGTGTGTGTGT---GTGT----------GT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100100
.............................................................................................TGGGT------------GTGTGT--G-------TGTGTGTGTGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100001
...............................................................................................GGT------------GTGTGT--G-------TGTGTGTGTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100001
...................................................................................................................................................T----------GTGTGTGT--------GTG--TGTTTGTGT-------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
droVir3
CTC---G--AGC--GTAA---GCGGG--------A---G------C-----------TTTGCA---------CTTAAAGTTTGTTTCTAAGCTCGACT------------TTGT----GTTTGTTGCTGCAGCGCTTGCGT---GTGT----------T--T--GT----GTGTGTG--TGGGAGTGG-------GCGTCA----------------ACAGTTACTG------GCAG----------------------TGGGCAGCTCCAAGAAGAA-----GGC-------------AAG-ACGC------------------A--GTTTTTTATTTTTTGTTG----CCAGC-C-------------AAAAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCAATTTACTGTTGCTGCTGCTGCCGACTGCAACAAC--------------AACTACAAGAAGAAGAAGAA-----------GAAG------AACG-----AASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............GTAA---GCGGG--------A---G------C-----------TTTGCA---------CTTAAAGTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002001000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................AAGAAGAA-----GGC-------------AAG-ACGC------------------............................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................TCTAAGCTCGACT------------TTGT----GTTTGTTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................TTTGTTTCTAAGCTCGACT------------TT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................GTTACTG------GCAG----------------------TGGGCAGCTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................GTTGCTGCAGCGCTTGCGT---G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................G----------------------TGGGCAGCTCCAAGAAGAA-----......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000010000000000000000000000000000000000000
...........................................................................................CTCGACT------------TTGT----GTTTGTTGCTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGCTGCCGACTGCAAC.....................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................AGCTCCAAGAAGAA-----GGC-------------AAG-..................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................CGTCA----------------ACAGTTACTG------GCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................GTTACTG------GCAG----------------------TGGGCAGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTACTGTTGCTGCTGCT.................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
........................................................................................AAGCTCGACT------------TTGT----GTTTGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................TACTG------GCAG----------------------TGGGCAGCTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000100
....................................................................................................................................................................................................................................................................................................................................................................................AAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCAATTTACTGT...........................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
..............GTAA---GCGGG--------A---G------C-----------TTTGCA---------CT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
................................................................................................CT------------TTGT----GTTTGTTGCTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................CA----------------ACAGTTACTG------GCAG----------------------TGGGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................T--GT----GTGTGTG--TGGGAGTGG-------GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
.................................................................................................T------------TTGT----GTTTGTTGCTGCAGCGCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CGC------------------A--GTTTTTTATTTTTTGTTG----CC.................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGAAGAAGAAGAA-----------GAAG------AACG-----AA2711.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................GTTACTG------GCAG----------------------TGGGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000100000000000000000000000
..............................................................................................................................................................................................................................................................................AAGAAGAA-----GGC-------------AAG-AC................................................................................................................................................................................................................................................................................................................................................................................................................1611.001000000000000000000000000000000000000000000000000000000000010000
............................................................................................................................................................................................................................GTTACTG------GCAG----------------------TGGGCAGCTCCAAGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..C---G--AGC--GTAA---GCGGG--------A---G------C-----------TTTGCA---------CT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TTTTTATTTTTTGTTG----CCAGC-C-------------AA.............................................................................................................................................................................................................................................................................................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTACAAGAAGAAGAAGA.................................1920.501001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--------------AACTACAAGAAGAAGAAGAA-----------.....................2120.501000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTACAAGAAGAAGAAGAA-----------.....................2020.501000000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--------------AACTACAAGAAGAAGAA...................................1840.251000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACAAGAAGAAGAAGAA-----------GAAC------...........2360.171000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................................................................................................................................................................................................CAGC-C-------------AAAAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAT......................................................................................................1670.141000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGAAGAA-----------GAAG------AACG-----..1890.111000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................GT---GTGT----------T--T--GT----GTGTGTG--TGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
AAA---G-------------------------------------------CC---CGCAAAA---------TGGTTG------------AGTATGCAT------------GTGTGT--G-------TGTGTGTGCGTGTGT---GTGT----------G--TGTGTGTGTGTGTGTG--TACGTATCA-------GTGTTG----------------CCAGCTGTTGAGCCTTGAAATAGTTGATTTGTGGATAAAAGTAGGGTAAAGCTAAAAGAGGCTAAAA-------------------ACGG---------------------CTATA-------------------------------------ACAAGCTT--------AAAATATGGGAATAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTGTTGGATGA--------------AAAA-----------ATGAA-----------ATGA------AGCA-----AASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................TGTGT---GTGT----------G--TGTGTGTGTGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102020000
...........................................................................................TATGCAT------------GTGTGT--G-------TGTGTGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000001
droGri2
GCA---T--CAC--AACA---AAGA-----------------------------------------------AATCA------------AGTGCGTGCCGACGTGTGT--ATG-------------------------TGT---GTGT----------G--T--G----------TG--TATGTATGGATCGGGGGT----------AAATATGAAATGAATATTTT------AAAA----------------------TGAGAAATTCCATGCAAACAACACGGC-------------CAAAGATG----GCAAACAAAAAAAAAGGATATG--------AAACGCAA-TAAAG-CC-----AAC-------GATTGCTGCCGC-CAAGTACAGTAGTAGT----------------------------------------------------------------------------------------------------------------------------------------------------------AGTTCTTCTTCTT-C-G-GCC---AGG-------------CCA------------------------------------------------------CAAA-----------GCCAG-----------CAGC------AGCAGCGGTAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................GT--ATG-------------------------TGT---GTGT----------G--T--G----------TG--TAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05110
.......................................................................................................TGTGT--ATG-------------------------TGT---GTGT----------G--T--G----------TG--T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101

Generated: 05/19/2015 at 03:27 PM