ID:

dsi_29630

 Coordinate:

3l:20691223-20691489 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.0 -35.9 -35.9

Flybase annnotation

exon [3l_20691490_20691579_-]; CDS [3l_20691490_20691579_-]; exon [3l_20691061_20691222_-]; CDS [3l_20691061_20691222_-]; intron [3l_20691223_20691489_-]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGGTGAAAATCTTAAACGACCTCTTCGCCCGTTTCGATCGCATTGCGGAGGTAAGATGCTCGAAAATATATATAAATATATAAATAAATGAAAATATTTCAATATTTAAAAAATGACTTTATTTTAAGTTACCATATATAGTCAAACTAGGTAACAATTTAATTCTGCTTTGAACCTAAGAAAGTCCGCAACATGATTTTGACTTTGTAAAATATCTGTTTGTGAAGTTAAGAGCTTTTAAAGAACATTTACCTGTAAATGATATTTAAACATTTCTTTGCACTCGCTGAATGCTCTTCCGCCCTTTTCCCTTTAAGGACAACCACTGTCTGCGTGTGAAGCTGCTGGGCGATTGTTACTATTGTGT
**************************************************.(((((.((((.....(((((....)))))((((((..(((((...))))).)))))).....(((((((((....((......((((.(((((((.(((((..(((............))).))))).....(((........)))))))))).))))......))....))))))))).)))))))))((((.((((((..((((((.((............)))))))).....)))))).))))...................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 M053
female body
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
................................................................................................................................................................................................................................................................................................................TTTTCACTTTAAGGACAAGC........................................... 20 2 1 34.00 34 29 5 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................TTTTCACTTTAAGGACAAG............................................ 19 2 3 27.00 81 67 14 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................TTTCACTTTAAGGACAAGC........................................... 19 2 4 23.75 95 67 28 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................TTTCACTTTAAGGACAAGCT.......................................... 20 3 19 23.21 441 308 131 1 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................................................................CTTTTCACTTTAAGGACAAG............................................ 20 2 1 23.00 23 15 7 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................GCTTTTCACTTTAAGGAC............................................... 18 2 9 22.67 204 135 69 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................TTTTCACTTTAAGGACAAGCT.......................................... 21 3 6 21.50 129 91 36 0 0 0 2 0 0 0 0
...............................................................................................................................................................................................................................................................................................................CTTTTCACTTTAAGGACAAGC........................................... 21 2 1 14.00 14 12 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................CTTTTCACTTTAAGGACAAGCT.......................................... 22 3 3 10.67 32 26 5 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................................GCTTTTCACTTTAAGGACAAG............................................ 21 3 4 9.25 37 28 7 2 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................GCTTTTCACTTTAAGGACAA............................................. 20 2 1 5.00 5 3 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................GCTTTTCACTTTAAGGACA.............................................. 19 2 3 4.67 14 11 3 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................TTCACTTTAAGGACAAGC........................................... 18 2 10 3.70 37 29 8 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................CTTTTCACTTTAAGGACAAGCG.......................................... 22 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................TCTGCTTTGAACTCAAGAAAG....................................................................................................................................................................................... 21 2 1 2.00 2 0 0 0 2 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................TTTTCACTTTAAGGACAA............................................. 18 1 2 1.50 3 2 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................CTTTTCACTTTAAGGACA.............................................. 18 1 2 1.50 3 2 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................TTAATTCTGCTTTGAACCT.............................................................................................................................................................................................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................CTTTTCACTTTAAGGACAA............................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................TATTTAAAAAATGACGTTGTT.................................................................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................TTTTCACTTTAAGGACAAGCC.......................................... 21 3 10 0.70 7 6 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................TTCCCTTTAAGGACAAGCT.......................................... 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................TTTTCACTTTAAGGACAAGCG.......................................... 21 3 4 0.50 2 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................ACGCTGAAAGCTCTTCCGCCC............................................................... 21 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................TGCTTTTCACTTTAAGGACA.............................................. 20 3 20 0.45 9 8 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................CCCGTTTCCATATAAGGACA.............................................. 20 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................ACGCTTTTCACTTTAAGGACA.............................................. 21 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...................................................TAAGATCCTCGAAAATA........................................................................................................................................................................................................................................................................................................... 17 1 5 0.20 1 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................................................................ATTTCTTTGTACTCGCT............................................................................... 17 1 6 0.17 1 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................TTTAATGCTGCTTTGA.................................................................................................................................................................................................. 16 1 6 0.17 1 0 0 0 0 0 0 1 0 0 0
......................................................................................................................................................................GCTTTGATCCTAAGA.......................................................................................................................................................................................... 15 1 6 0.17 1 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................................................................................................................................GAAGGCTCGTCCGCCCT.............................................................. 17 2 7 0.14 1 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................GTGAAGCTGCCGGGTGACTG............ 20 3 8 0.13 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................TGCTTTTCACTTTAAGGACAA............................................. 21 3 8 0.13 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................ACGCTTTTCACTTTAAGGAC............................................... 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................ATATAGAGTCAAACT........................................................................................................................................................................................................................... 15 1 13 0.08 1 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................................................................................................CTTTTCACTGTAAGGACAAG............................................ 20 3 13 0.08 1 0 1 0 0 0 0 0 0 0 0
...............ACGACATCTTCGGCCCTTT............................................................................................................................................................................................................................................................................................................................................. 19 3 14 0.07 1 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................AAATATCTGTTTGTC............................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................GCTTTGATCCTAAGAT......................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1
..................................................................................................................................................................................................GATTTTGACTTCGTCA............................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................................................................................GTTGTGAGGTTAAGCGCT................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

ACCACTTTTAGAATTTGCTGGAGAAGCGGGCAAAGCTAGCGTAACGCCTCCATTCTACGAGCTTTTATATATATTTATATATTTATTTACTTTTATAAAGTTATAAATTTTTTACTGAAATAAAATTCAATGGTATATATCAGTTTGATCCATTGTTAAATTAAGACGAAACTTGGATTCTTTCAGGCGTTGTACTAAAACTGAAACATTTTATAGACAAACACTTCAATTCTCGAAAATTTCTTGTAAATGGACATTTACTATAAATTTGTAAAGAAACGTGAGCGACTTACGAGAAGGCGGGAAAAGGGAAATTCCTGTTGGTGACAGACGCACACTTCGACGACCCGCTAACAATGATAACACA
**************************************************.(((((.((((.....(((((....)))))((((((..(((((...))))).)))))).....(((((((((....((......((((.(((((((.(((((..(((............))).))))).....(((........)))))))))).))))......))....))))))))).)))))))))((((.((((((..((((((.((............)))))))).....)))))).))))...................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
..........................................AACGCCGCCATTCTA...................................................................................................................................................................................................................................................................................................................... 15 1 3 0.33 1 0 1 0 0
.....................................................................................................................................................................................TTTAGGCGCTGTACTAAAA....................................................................................................................................................................... 19 2 4 0.25 1 1 0 0 0
................................................................................................................................AATGGTATACATCAGGTTGGT.......................................................................................................................................................................................................................... 21 3 6 0.17 1 1 0 0 0
................................................................................................................................CATGGTATATCTCAGTT.............................................................................................................................................................................................................................. 17 2 6 0.17 1 0 0 1 0
...................................................................................................................................................................................ATTTTAGGCGCTGTACTAAA........................................................................................................................................................................ 20 3 13 0.15 2 2 0 0 0
.............................................................................................................................................................................................................AAATTTTATAGACGAACACGT............................................................................................................................................. 21 3 12 0.08 1 0 1 0 0
..................................................................................................................................................................................................CTAAAACTGATACCTTT............................................................................................................................................................ 17 2 20 0.05 1 0 0 0 1
............................................................................................................................................................................................................................................AAATTTCTTGTCAAT.................................................................................................................... 15 1 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:20691173-20691539 - dsi_29630 TGGTGAAAATCTTAAACGACCTCTTCGCCCGTTTCGATCGCATTGCGGAGGTAAGATGCTCGAAAATATA--------TATAAATATATAAA------------------------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------AAATGAAAATATTTCA---------------------------------------------------------------------------AT-------------------A--TTTAAAA-------------AATGACTTTA--------TTTTAAGTTACCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------------------------------------------------------------------------------------------------------------------------------------------TATAGTCAAACTAGGTAACAATTTAATTCTGCTTTGAACCTAAGAAAG------------------------------------------TCCGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATTTTGACTTTGTAAAATA-TCTGTT----T-----------------------------------GTGAAG-TTAAGAGCTTTTAAAGAACAT-TTACC-TGTAAATGATATTTAAACATT-TC----------TTTGCACTCGCTGAATG-------------------------------------------CTCTTCC-GCC--CTT-TTCCCTTTAAGGACAACCACT--------------------------GTCTGCGTGTGAAGCTGCTGGGCGATTGTTACTATTGTGT
droSec2 scaffold_11:1095411-1095784 - TGGTGAAAATCCTAAACGACCTCTTCGCCCGTTTCGATCGCATTGCGGAGGTGAGTTGCTTGAATTTATT--------TA-------------------------------------TAATAAATAAATAAACA---------------------AATAA-----------------------------------------------------------------------------------------------------------------------------------TATTTCA---------------------------------------------------------------------------AT-------------------A--TTTAAAA-------------AATGACTTTA--------TTTTAAGCTACAATTT--TGCTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------------------------------------------------------------------------------------------------------------------------------------------TAAAGTCAAACTAGGTTATAATTTAATTCTGCTTTGAATTCAAGAAAG------------------------------------------CCCAAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTTTTGACTTTGTAAAATAGTTTCGT----T------------------------------------------------GCTTTTAAAGAAGAT-TTACC-TGTAAATGATATTTAAACATACTCT--TTGGTGCCTTGCACTCGCTGAATG-------------------------------------------CTTTTCC-GCC--CTT-TACCCTTTAAGGACAACCACT--------------------------GTCTGCGTGTGAAGCTGCTTGGCGATTGTTACTATTGTGT
dm3 chr3L:21137396-21137797 - TGGTGAAAATCTTAAATGACCTGTTCGCCCGATTCGATCGCATTGCGGAGGTAAGTTGCTTGAAAATATA--------AATAA------------------------------A--------------TAAATATAA------------------AATAATT------------------------------------------------------------------------------------------------------------------------AAATAAAATCATTTCA---------------------------------------------------------------------------AT-------------------A--TTT--------------------------A--------TTTTAAAG--------------------------------------------------------------------------------------------------------------------------------------------------------TACACATTTACTATAAATTACAACAATTTCTTGTTG-------------------------------------------------------------------------------------------------------------------------------ATTTTCTAAAGTCAAACTA--CTACAATTTAATTTTGCTTTAAATTCAAGAAAG------------------------------------------TACAAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTTTCGACTTTGTAAAATA-TTTTGT----T-----------------------------------GTAAAG-CGAAGAGCTTTTAAGGAACACGATA---TTTAAATGATATTTAAACATTTTCT--TTGGTGCCTTGCACTTGCTGAATG-------------------------------------------CTTTTCC-GCC--CTT-TTCCCTTTAAGGACAACCACT--------------------------GCCTGCGTGTGAAGCTGCTGGGCGATTGTTACTATTGTGT
droEre2 scaffold_4784:20826623-20827056 - TGGTGAAAATCTTAAACGACCTGTTCGCCCGCTTCGATCGCATTGCGGAGGTAAGTTCTTAAAA-ACA--------------------------------------------------------------------AATTTTCACCTGAA------------------------------AT-------------------------------------GTAGTTAGGA-AAATAAATGGC----------------------CTAAAG----------CAACTAT------GTTTGA---------------------------------------------------------------------------AT-------------------A--TGCATAA-------------TAGGATGTTA--------TTTGGAAGTA----------------------------------------------------------------------------------------------------------------------------------------------GCATTGAATACACATTCGCTGCAAATTATAATATTTTCCTGATGCATAAATTGTTTATGA--GGATAACGAAGCATGCCTATACCTATTCTAAAAACGAAATAGGTAAAACGTTTAACTTTGCTTGATAATTAAAGAAATTA--------------AATTTTGTTCTACAAATCCATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATT-TTTGAATGATATTTAAACACTTTCT--TCGGTGTCTGGCCCTG---GAATA-------------------------------------------CC---CC-ACC------TTTTCCTGAAGGACAACCACT--------------------------GTCTGCGTGTGAAGCTGCTGGGCGACTGCTACTATTGTGT
droYak3 3L:19385692-19386199 + TGGTGAAAATCTTAAACGACCTGTTCGCCCGCTTCGATCGCATTGCGGAGGTGAGTTGTATGAAAATATA--------T----------------------------------------------------------ATTTCAACCTAAG------------------------------ATGCA---------------------------AG---ATGCAGTTAAGAAAAATAAACAGCTTATAATATTATATAGTAATGGCTAAAG----------TAAATAT------ATTTAT------------------------------------------------------------------------------------------------ATAATC--AA-------------AAAGAAGCCA--------T--------------------------------------------------------------------------------------------------------------------------------------------TTA----AGAAGTATTTAATACACATTCTTTTTCAACTAAAATATTTTTTTGATGCACAAATTGTCTTTGT--GGTTCACGAAAAGTTC---TACCTATTCCAAAGTCAAAATAGGAAAGAAA-TTAGTTTTGCTTGATAATTAAAGAAATTAAACACATTTAAACAAATTTCTTTCTACAAATTCATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGTAAGGAGCGACTATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAT-TTAGCTTTAAAATGATATTTGAACATTTTCT--TTGGTGTCTGGCATTCGGTGAATG-------------------------------------------CTTTTCC-GCC--CTT-TTCCCTTTAAGGACAACCACT--------------------------GTCTGCGTGTGAAGCTGCTGGGCGATTGCTACTATTGTGT
droEug1 scf7180000409063:178826-178941 - AAAAATAAATAAACA-----------------------------------------------------------------------AATAAATAAA-----CAT---------A--------------A---------------------------------------------------------------------------------------------------------------------------------------------------------CGAT------ATCTA-----------------------------------------------------------------------------T-------------------ATA--TAAAA-------------AACCACTCTA--------C--------------------------------------------------------------------------------------------------------------------------------------------CAA----ATATAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAATACAAAATGATTAAATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTTTCAA-TTTGT-------------------------------------------------------------------------------------------------------------------------------------------------TGAGAAATT-----------------------------------------------------------------------------------------------------------------------------------C
droBia1 scf7180000302193:4895645-4896162 + TGGTGAAAATCTTGAACGACCTCTTCGCCCGGTTCGATCGCATTGCGGAGGTAAGTTGCCAGAAAA----G--CA-----------------------------------------------------------CAAATTATCT-----------------A-CTT--GATCCACTGAAAATAAACTTGTAATCAGTCGAGAATCAATATAAAT---ATTGATA---------------------------------------------AAGTCATATT-------------------ATTGTCACTAAAATCGTGTCTAACAAAAATAATTTACATTAGTTGTG-------------------------------------GA--------------------CAATGTGTTAATAA--TGCTATTATCTTTGTCAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGAAATGTA--------------------------------------------TATCAAGAATGAATAAAAATTCTGTTAAATCGAAATAAT--------------------------------------------------------------------------------------AATAACTTAAAATATTTTAACTTGTGCAATTTTATACATTTTATAATTTTGATTTTGAGTCCATAAAATATATTT--------------------TATT-----TAAT-----------TC----T---------------------------------------TGCT-AACTGAATAGTTT----------------------------------------TCTGTGTGCTTTAGTTTTCTGGGTGAATGCTTTATTGAGCAGTTTTCCCGCCGATTCTCACCG---------CTTTCCC-GCT--TTT--CCGCCCCCAGGACAACCACT--------------------------GTCTGCGCGTGAAGCTGCTGGGCGATTGTTACTACTGTGT
droTak1 scf7180000415319:233770-234209 - TGGTGAAAATCTTAAATGACCTGTTTGCCCGGTTCGATCGCATTGCAGAGGTAAGTGGTTAAGAAA----A-CAA-----------------------------------------------------------AAAATT-------------------ATA-CTT--GA---------ACTACACAGAAAT------------------------------------------------------------------------------AGTGGAGAA-------------------ACTG--------------------------------------------------------------------------------CA---------------------------------------------------------------CAAAAATTTATTAACCAAAAATTT------------------------------------------------------------TTAATTATT------------------------TAAATTTAAAACTAATTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATATTAAT------------------------------------------------TTTAATGTATTTTCTTTTTGAAAAAAATTCTTTACACACTAAAT--------GAAAATGAAAAAAAGGAAGAATT-----------------------------GCATTTTTGTAT-------------------------TTTGTTTTATTTTTATAT---------------------------------------------------------------------------------------------------------------TTTTAA-TTAAA----------------------------------C--GATGACTTAAAGTCGCCCA-AGC-GAATAGTTT----------------------------------------TCTGTGTG------------CTGCGAATGCTTTATTTAGCAATTTTCCCACCGATTTTCACCGCT--------TTTTTC-GCT--TTTCCGCCCCTCAAGGACAACCACT--------------------------GTCTGCGTGTAAAGCTGCTGGGCGATTGTTACTACTGTGT
droEle1 scf7180000491193:2212460-2212658 + TGGTGAAAATCTTAAACGACCTGTTCGCTCGATTCGATCGCATTGCAGAGGTAAGTTACAAAACAA----C--AA-----------------------------------------------------------TAAATTTCCCCC------------------TTCTAA---------AATACA---------------AATCTATTGG--CATTGATT-----------------------------------------------------T---------------------------------------------------------------------------------------------------GTAAAATTTTA---------------------------------------------------------------AAAAATTTTAACAAAAAAGTAAAG------------------------------------------------------------ACAATAATT------------------------TAAATCCTATAATAAAATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA--------------------------------------------------------------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGACTTTGACTTTGATAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droRho1 scf7180000779645:410-767 - TTG------------------------------------------CAGTGGTAGCATACCAAC------------ATAAATAA------------------------------------------------AGT---------------------ATATTTATTTT--GA---------TG--------------------------------------------------------------------------------------------------T--TAAAAAAGAGTTTTA-----------------------------------------------------------------------------T-------------------ATA--TTTGA-------------AA--------------------------TGATTT--TTTATTTAAATAGTTAAGGAAAGTTTTATTTAATTTCGG--------------------------------------------------------------------------------------------------------------------TCATCTTAAATAATTTGGAGTTGT-CGATTTGGCTTTGTTAGATTTCTGATATATACTTATATTTCTTAAAAAAGTAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTCCG-AAC-GAATAGTTT----------------------------------------TGTGAGTGGTGTCCTGCATTGGGTGTATGTTTTTTTGAGTGATTTTCCCCCCGATTTCAACCAAC--------CCTCTC-GCTTTTCCCCCCCTTTTAAGGACAACCACT--------------------------GTCTGCGCGTGAAACTGCTGGGCGATTGTTACTACTGTGT
droFic1 scf7180000453929:292360-292800 - TGGTGAAAATCTTGAACGACCTCTTCGCCCGATTCGATCGCATTGCAGAGGTGAGTTGCAGAGAAA----A------------------------------------------------------------------------ACCTGAG------------------------------A-------------------------------------------------------------------------------------------------------A-------------TC-------------------------------------------------------------------------------CTTTAAAATGATTTAAAAAGTGTAT-------------A--AGCT-------------------------------------------------AAATAATAATTGTTTTATGTCATGTTAAAAGTGTTAACATTACTATGCAATTTTCAAGTCAATTATCTTTTTGGTTTTATGACAAAGCAAGTAAATCCATTAAAAA----ATATCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTAATACT--------------------------------------------------------------------------------------------------------------------------------------------------TTG---------------------------------------------ATAATTTTTAACAATT----------------TT----AAAAGTATTATGTAGTTATTGGGTT-----------TTTTTGCA-AGC-CAAATATTT----------------------------------------TCTGTGTGGTTTCGTGCATTCGGCGAATGCTTTATTGAGCAATTTCC--CCCGATTTTCACCCCCTGTAACGCTTTTCC-GCT--CTTCCGCCCCCCAAGGACAACCACT--------------------------GTCTGCGTGTCAAGCTGCTGGGCGATTGTTACTACTGTGT
droKik1 scf7180000302517:529146-529362 - AGATAAAAATAAATA-----------------------------------------------------------------------TAGAAATAAA-----TAT---------A--------------A---------------------------------------------------------------------------------------------------------------------------------------------------------AAATAAAAATATACAA------------------------------------------------------------------------------------------------ATAAATATAA-------------A--AACTCTAAGCTTTGTCATTAAGTTTTAATATATTGTATAAG--------------------------------------------------AATACTTTTCAATTATAAGGTAAATAATC------------------------TGTA------------------------------------------AACTA---------------------------------------------------------------------------------------------------------------------------AAAAAAATTTTTTTTTGTTAATTTTTTAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT----------------GT----AAGGTTG--------------------------------------------CAACCC-----------C-TTATC-AAATTTTTAAATTTAATAACT-TCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG-
droAna3 scaffold_13266:18369019-18369234 - AATTTAAAAA-----------------------------------------TAAATTGTTTAAAAA----CCCTT-----------------------------------------------------------CAAACTGCTT------GCGGT----ATA-TTT--AA---------AATATACATATTTTCTGTAAAAATCCAGTAGAAAATGGATT-----------------------------------------------------T---------------------------------------------------------------------------------------------------GTAAAATTT-------------------------------------------TA--------TTTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTTAGTTAAATA--------------AAATTTCTTTTGAATATGGAC------------------------------------------------TATATTGTGTTTTCGTTCCTCAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGCCTTTATAGGACAT-ATATT-TAATATTTATACTTAAACATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droBip1 scf7180000396580:868919-869025 + TAATATAATTATAAA-----------------------------------------------------------------------TATATATAAA-----TAT---------A--------------T---------------------------------------------------------------------------------------------------------------------------------------------------------AAATATATATATAAAT------------------------------------------------------------------------------------------------AAATA---------------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTTTTAATTAATATAATTATAAATATATA----------------TTTATTAAGAATTTAAATC
dp5 XL_group1e:4580220-4580356 + TTGAAAGATTTTTAATGGAA-----------------------------------------------------------------------ACTAGTTATATCT---------AATCTTC--------C---------------------------------------------------------------------------------------------------------------------------------------------------------GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC-----------------------------------ATTTATTTACAATCTT-------TTGCTATGCAT--ATTTCCCCTCCGTAGGATAATCATT--------------------------GCCTGCGCATTAAGATCTTGGGCGATTGTTATTATTGTGT
droPer2 scaffold_1:5362098-5362312 + CGATAATATATTTACAACAT--TTTC--------------------------AAG------------------------A-------------------------------------TGAAAAAGAAAAAAGAA---------------------ATTTAAT-TTT--GA---------AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--TAAAATA-------------AAAAACTCAA---------------TTAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------------------------------------------------------------------------------------------------------------------------------------------TAAATTCAAAATAAAGAAGAATTTAATTCAAAAAGAAAAACAAATTTA------------------------------------------TTTAAAATAAATATATAAAAAAATTGTTAAATTAAATTAAA--------------------------------------------------------------------------------------GAACAAATACAACAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTAAA-AATAAATTAAATTTTAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droWil2 scf2_1100000004909:1001727-1001860 + TGCCAAAACTTAAGT--------------------------------------------------TCA--------------------------------------------------------------------AGTGTTTA-------------------------A---------TA--------------------------------------------------------------------------------------------------T--AAATGAAGATATATAA------------------------------------------------------------------------------------------------ACATATAAAA-------------G--CGGTGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTTGTGTTAACTAATAGTCAGTTCTTCAACAATAATTTAAAAAATT------------------TAAAAAAATATGTAATTTTGA
droVir3 scaffold_12958:2938682-2938859 + ATATATATATATATA-----------------------------------------------------------------------TATATATATA-----TAT---------A--------------T---------------------------------------------------------------------------------------------------------------------------------------------------------ATATAAATATATATAT------------------------------------------------------------------------------------------------ATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTGTTGTGAATTTATACACCTAAAATATATTTGTTGATACATACCTGACTTCAATT-----TGAT-----------TT----T---------------------------------------AAA-----------------------------------------------------------------------------------------------------------------------------------------------------GTAAAGTATAATTTTA--------------------------CCTTTCACTTATAATTATTAGGTTGATACTTATTTAAGAA
droMoj3 scaffold_6473:9744267-9744720 + TGGTGCGGCTGCTCAACGAGCTCTTCGGTCGTTTCGATCAGCTGGCGCATGTGAGTTGCACAACAATTCC-----TTAAATCAAG-------------------CATCGATTT------------------------TTTTTATTAAAAA------------------------------ATAAA---------------------------AG---ATGGAGA---------------------------------------------AAGAGAAAAG-------------------ACTGCTACAAAAGTTTTTCCTAATTAAAAAAAAA---------GGAGGTCAAACTTCTCTCTTTCTTTCTCTCTTAT-------------------AGT--TTAGA-------------AA--------------------------CAATTT--TTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAG------------------------------------AAAAATTTTTTTAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAACAGGATATATATACATATATTTTTTGAGTTTCAACAAACCCCATTTTATTTTTAAATTAAAAGAAAAAAA--AATATATATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-ATATA-AATAAGTAGATCGTAAATA-------------------TATCCCTTCTCT--------------------------------------------CTCTATC-TCC--TTCTCATCCTTATAGGATAACCACT--------------------------GCTTGCGCATCAAAATATTGGGCGATTGCTATTACTGTGT
droGri2 scaffold_15110:12128836-12128936 + AAGTGCTGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGTTTTTACAAAATC-------------------------------------------CTGCATC-GTT--CTCTCTGCCTTACAGGACAATCATT--------------------------GCCTGCGTGTGAAGCTGCTCGGCGATTGCTACTACTGTGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGGTGAAAATCTTAAACGACCTCTTCGCCCGTTTCGATCGCATTGCGGAGGTAAGATGCTCGAAAATATA--------TATAAATATATAAA------------------------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------AAATGAAAATATTTCA---------------------------------------------------------------------------AT-------------------A--TTTAAAA-------------AATGACTTTA--------TTTTAAGTTACCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------------------------------------------------------------------------------------------------------------------------------------------TATAGTCAAACTAGGTAACAATTTAATTCTGCTTTGAACCTAAGAAAG------------------------------------------TCCGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATTTTGACTTTGTAAAATA-TCTGTT----T-----------------------------------GTGAAG-TTAAGAGCTTTTAAAGAACAT-TTACC-TGTAAATGATATTTAAACATT-TC----------TTTGCACTCGCTGAATG-------------------------------------------CTCTTCC-GCC--CTT-TTCCCTTTAAGGACAACCACT--------------------------GTCTGCGTGTGAAGCTGCTGGGCGATTGTTACTATTGTGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATTCTGCTTTGAACCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATA-TCTGTT----T-----------------------------------GTC......................................................................................................................................................................................................................................15200.05100000000001000000
droSec2
TGGTGAAAATCCTAAACGACCTCTTCGCCCGTTTCGATCGCATTGCGGAGGTGAGTTGCTTGAATTTATT--------TA-------------------------------------TAATAAATAAATAAACA---------------------AATAA-----------------------------------------------------------------------------------------------------------------------------------TATTTCA---------------------------------------------------------------------------AT-------------------A--TTTAAAA-------------AATGACTTTA--------TTTTAAGCTACAATTT--TGCTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------------------------------------------------------------------------------------------------------------------------------------------TAAAGTCAAACTAGGTTATAATTTAATTCTGCTTTGAATTCAAGAAAG------------------------------------------CCCAAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTTTTGACTTTGTAAAATAGTTTCGT----T------------------------------------------------GCTTTTAAAGAAGAT-TTACC-TGTAAATGATATTTAAACATACTCT--TTGGTGCCTTGCACTCGCTGAATG-------------------------------------------CTTTTCC-GCC--CTT-TACCCTTTAAGGACAACCACT--------------------------GTCTGCGTGTGAAGCTGCTTGGCGATTGTTACTATTGTGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
TGGTGAAAATCTTAAATGACCTGTTCGCCCGATTCGATCGCATTGCGGAGGTAAGTTGCTTGAAAATATA--------AATAA------------------------------A--------------TAAATATAA------------------AATAATT------------------------------------------------------------------------------------------------------------------------AAATAAAATCATTTCA---------------------------------------------------------------------------AT-------------------A--TTT--------------------------A--------TTTTAAAG--------------------------------------------------------------------------------------------------------------------------------------------------------TACACATTTACTATAAATTACAACAATTTCTTGTTG-------------------------------------------------------------------------------------------------------------------------------ATTTTCTAAAGTCAAACTA--CTACAATTTAATTTTGCTTTAAATTCAAGAAAG------------------------------------------TACAAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTTTCGACTTTGTAAAATA-TTTTGT----T-----------------------------------GTAAAG-CGAAGAGCTTTTAAGGAACACGATA---TTTAAATGATATTTAAACATTTTCT--TTGGTGCCTTGCACTTGCTGAATG-------------------------------------------CTTTTCC-GCC--CTT-TTCCCTTTAAGGACAACCACT--------------------------GCCTGCGTGTGAAGCTGCTGGGCGATTGTTACTATTGTGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGTGAAGCTGCTGGG..................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....GAAAATCTTAAATGACCTGTTCGCCCGATTCGATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GCCCGATTCGATCGCATTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TGAAAATATA--------AATAA------------------------------A--------------TAAATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAGCTGCTGGGCGATGT............2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TGGTGAAAATCTTAAACGACCTGTTCGCCCGCTTCGATCGCATTGCGGAGGTAAGTTCTTAAAA-ACA--------------------------------------------------------------------AATTTTCACCTGAA------------------------------AT-------------------------------------GTAGTTAGGA-AAATAAATGGC----------------------CTAAAG----------CAACTAT------GTTTGA---------------------------------------------------------------------------AT-------------------A--TGCATAA-------------TAGGATGTTA--------TTTGGAAGTA----------------------------------------------------------------------------------------------------------------------------------------------GCATTGAATACACATTCGCTGCAAATTATAATATTTTCCTGATGCATAAATTGTTTATGA--GGATAACGAAGCATGCCTATACCTATTCTAAAAACGAAATAGGTAAAACGTTTAACTTTGCTTGATAATTAAAGAAATTA--------------AATTTTGTTCTACAAATCCATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATT-TTTGAATGATATTTAAACACTTTCT--TCGGTGTCTGGCCCTG---GAATA-------------------------------------------CC---CC-ACC------TTTTCCTGAAGGACAACCACT--------------------------GTCTGCGTGTGAAGCTGCTGGGCGACTGCTACTATTGTGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
TGGTGAAAATCTTAAACGACCTGTTCGCCCGCTTCGATCGCATTGCGGAGGTGAGTTGTATGAAAATATA--------T----------------------------------------------------------ATTTCAACCTAAG------------------------------ATGCA---------------------------AG---ATGCAGTTAAGAAAAATAAACAGCTTATAATATTATATAGTAATGGCTAAAG----------TAAATAT------ATTTAT------------------------------------------------------------------------------------------------ATAATC--AA-------------AAAGAAGCCA--------T--------------------------------------------------------------------------------------------------------------------------------------------TTA----AGAAGTATTTAATACACATTCTTTTTCAACTAAAATATTTTTTTGATGCACAAATTGTCTTTGT--GGTTCACGAAAAGTTC---TACCTATTCCAAAGTCAAAATAGGAAAGAAA-TTAGTTTTGCTTGATAATTAAAGAAATTAAACACATTTAAACAAATTTCTTTCTACAAATTCATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGTAAGGAGCGACTATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAT-TTAGCTTTAAAATGATATTTGAACATTTTCT--TTGGTGTCTGGCATTCGGTGAATG-------------------------------------------CTTTTCC-GCC--CTT-TTCCCTTTAAGGACAACCACT--------------------------GTCTGCGTGTGAAGCTGCTGGGCGATTGCTACTATTGTGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
AAAAATAAATAAACA-----------------------------------------------------------------------AATAAATAAA-----CAT---------A--------------A---------------------------------------------------------------------------------------------------------------------------------------------------------CGAT------ATCTA-----------------------------------------------------------------------------T-------------------ATA--TAAAA-------------AACCACTCTA--------C--------------------------------------------------------------------------------------------------------------------------------------------CAA----ATATAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAATACAAAATGATTAAATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTTTCAA-TTTGT-------------------------------------------------------------------------------------------------------------------------------------------------TGAGAAATT-----------------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotal
No Reads
droBia1
TGGTGAAAATCTTGAACGACCTCTTCGCCCGGTTCGATCGCATTGCGGAGGTAAGTTGCCAGAAAA----G--CA-----------------------------------------------------------CAAATTATCT-----------------A-CTT--GATCCACTGAAAATAAACTTGTAATCAGTCGAGAATCAATATAAAT---ATTGATA---------------------------------------------AAGTCATATT-------------------ATTGTCACTAAAATCGTGTCTAACAAAAATAATTTACATTAGTTGTG-------------------------------------GA--------------------CAATGTGTTAATAA--TGCTATTATCTTTGTCAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGAAATGTA--------------------------------------------TATCAAGAATGAATAAAAATTCTGTTAAATCGAAATAAT--------------------------------------------------------------------------------------AATAACTTAAAATATTTTAACTTGTGCAATTTTATACATTTTATAATTTTGATTTTGAGTCCATAAAATATATTT--------------------TATT-----TAAT-----------TC----T---------------------------------------TGCT-AACTGAATAGTTT----------------------------------------TCTGTGTGCTTTAGTTTTCTGGGTGAATGCTTTATTGAGCAGTTTTCCCGCCGATTCTCACCG---------CTTTCCC-GCT--TTT--CCGCCCCCAGGACAACCACT--------------------------GTCTGCGCGTGAAGCTGCTGGGCGATTGTTACTACTGTGTSizeHit CountTotal NormTotal
No Reads
droTak1
TGGTGAAAATCTTAAATGACCTGTTTGCCCGGTTCGATCGCATTGCAGAGGTAAGTGGTTAAGAAA----A-CAA-----------------------------------------------------------AAAATT-------------------ATA-CTT--GA---------ACTACACAGAAAT------------------------------------------------------------------------------AGTGGAGAA-------------------ACTG--------------------------------------------------------------------------------CA---------------------------------------------------------------CAAAAATTTATTAACCAAAAATTT------------------------------------------------------------TTAATTATT------------------------TAAATTTAAAACTAATTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATATTAAT------------------------------------------------TTTAATGTATTTTCTTTTTGAAAAAAATTCTTTACACACTAAAT--------GAAAATGAAAAAAAGGAAGAATT-----------------------------GCATTTTTGTAT-------------------------TTTGTTTTATTTTTATAT---------------------------------------------------------------------------------------------------------------TTTTAA-TTAAA----------------------------------C--GATGACTTAAAGTCGCCCA-AGC-GAATAGTTT----------------------------------------TCTGTGTG------------CTGCGAATGCTTTATTTAGCAATTTTCCCACCGATTTTCACCGCT--------TTTTTC-GCT--TTTCCGCCCCTCAAGGACAACCACT--------------------------GTCTGCGTGTAAAGCTGCTGGGCGATTGTTACTACTGTGTSizeHit CountTotal NormTotal
No Reads
droEle1
TGGTGAAAATCTTAAACGACCTGTTCGCTCGATTCGATCGCATTGCAGAGGTAAGTTACAAAACAA----C--AA-----------------------------------------------------------TAAATTTCCCCC------------------TTCTAA---------AATACA---------------AATCTATTGG--CATTGATT-----------------------------------------------------T---------------------------------------------------------------------------------------------------GTAAAATTTTA---------------------------------------------------------------AAAAATTTTAACAAAAAAGTAAAG------------------------------------------------------------ACAATAATT------------------------TAAATCCTATAATAAAATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA--------------------------------------------------------------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGACTTTGACTTTGATAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droRho1
TTG------------------------------------------CAGTGGTAGCATACCAAC------------ATAAATAA------------------------------------------------AGT---------------------ATATTTATTTT--GA---------TG--------------------------------------------------------------------------------------------------T--TAAAAAAGAGTTTTA-----------------------------------------------------------------------------T-------------------ATA--TTTGA-------------AA--------------------------TGATTT--TTTATTTAAATAGTTAAGGAAAGTTTTATTTAATTTCGG--------------------------------------------------------------------------------------------------------------------TCATCTTAAATAATTTGGAGTTGT-CGATTTGGCTTTGTTAGATTTCTGATATATACTTATATTTCTTAAAAAAGTAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTCCG-AAC-GAATAGTTT----------------------------------------TGTGAGTGGTGTCCTGCATTGGGTGTATGTTTTTTTGAGTGATTTTCCCCCCGATTTCAACCAAC--------CCTCTC-GCTTTTCCCCCCCTTTTAAGGACAACCACT--------------------------GTCTGCGCGTGAAACTGCTGGGCGATTGTTACTACTGTGTSizeHit CountTotal NormTotal
No Reads
droFic1
TGGTGAAAATCTTGAACGACCTCTTCGCCCGATTCGATCGCATTGCAGAGGTGAGTTGCAGAGAAA----A------------------------------------------------------------------------ACCTGAG------------------------------A-------------------------------------------------------------------------------------------------------A-------------TC-------------------------------------------------------------------------------CTTTAAAATGATTTAAAAAGTGTAT-------------A--AGCT-------------------------------------------------AAATAATAATTGTTTTATGTCATGTTAAAAGTGTTAACATTACTATGCAATTTTCAAGTCAATTATCTTTTTGGTTTTATGACAAAGCAAGTAAATCCATTAAAAA----ATATCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTAATACT--------------------------------------------------------------------------------------------------------------------------------------------------TTG---------------------------------------------ATAATTTTTAACAATT----------------TT----AAAAGTATTATGTAGTTATTGGGTT-----------TTTTTGCA-AGC-CAAATATTT----------------------------------------TCTGTGTGGTTTCGTGCATTCGGCGAATGCTTTATTGAGCAATTTCC--CCCGATTTTCACCCCCTGTAACGCTTTTCC-GCT--CTTCCGCCCCCCAAGGACAACCACT--------------------------GTCTGCGTGTCAAGCTGCTGGGCGATTGTTACTACTGTGTSizeHit CountTotal NormTotal
No Reads
droKik1
AGATAAAAATAAATA-----------------------------------------------------------------------TAGAAATAAA-----TAT---------A--------------A---------------------------------------------------------------------------------------------------------------------------------------------------------AAATAAAAATATACAA------------------------------------------------------------------------------------------------ATAAATATAA-------------A--AACTCTAAGCTTTGTCATTAAGTTTTAATATATTGTATAAG--------------------------------------------------AATACTTTTCAATTATAAGGTAAATAATC------------------------TGTA------------------------------------------AACTA---------------------------------------------------------------------------------------------------------------------------AAAAAAATTTTTTTTTGTTAATTTTTTAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT----------------GT----AAGGTTG--------------------------------------------CAACCC-----------C-TTATC-AAATTTTTAAATTTAATAACT-TCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG-SizeHit CountTotal NormTotal
No Reads
droAna3
AATTTAAAAA-----------------------------------------TAAATTGTTTAAAAA----CCCTT-----------------------------------------------------------CAAACTGCTT------GCGGT----ATA-TTT--AA---------AATATACATATTTTCTGTAAAAATCCAGTAGAAAATGGATT-----------------------------------------------------T---------------------------------------------------------------------------------------------------GTAAAATTT-------------------------------------------TA--------TTTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTTAGTTAAATA--------------AAATTTCTTTTGAATATGGAC------------------------------------------------TATATTGTGTTTTCGTTCCTCAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGCCTTTATAGGACAT-ATATT-TAATATTTATACTTAAACATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................TGTTTAAAAA----CCCTT-----------------------------------------------------------CAAACTGCTT------GCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGGAC------------------------------------------------TATATTGTGTTTTCGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
droBip1
TAATATAATTATAAA-----------------------------------------------------------------------TATATATAAA-----TAT---------A--------------T---------------------------------------------------------------------------------------------------------------------------------------------------------AAATATATATATAAAT------------------------------------------------------------------------------------------------AAATA---------------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTTTTAATTAATATAATTATAAATATATA----------------TTTATTAAGAATTTAAATCSizeHit CountTotal NormTotal
No Reads
dp5
TTGAAAGATTTTTAATGGAA-----------------------------------------------------------------------ACTAGTTATATCT---------AATCTTC--------C---------------------------------------------------------------------------------------------------------------------------------------------------------GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC-----------------------------------ATTTATTTACAATCTT-------TTGCTATGCAT--ATTTCCCCTCCGTAGGATAATCATT--------------------------GCCTGCGCATTAAGATCTTGGGCGATTGTTATTATTGTGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------GCCTGCGCATTAAGATCTTGGGC.................2411.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGCATTAAGATCTTGGGC.................2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGCATTAAGATCTTGGGCGATTGTT..........2811.0010100000000
droPer2
CGATAATATATTTACAACAT--TTTC--------------------------AAG------------------------A-------------------------------------TGAAAAAGAAAAAAGAA---------------------ATTTAAT-TTT--GA---------AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--TAAAATA-------------AAAAACTCAA---------------TTAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------------------------------------------------------------------------------------------------------------------------------------------TAAATTCAAAATAAAGAAGAATTTAATTCAAAAAGAAAAACAAATTTA------------------------------------------TTTAAAATAAATATATAAAAAAATTGTTAAATTAAATTAAA--------------------------------------------------------------------------------------GAACAAATACAACAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTAAA-AATAAATTAAATTTTAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TGCCAAAACTTAAGT--------------------------------------------------TCA--------------------------------------------------------------------AGTGTTTA-------------------------A---------TA--------------------------------------------------------------------------------------------------T--AAATGAAGATATATAA------------------------------------------------------------------------------------------------ACATATAAAA-------------G--CGGTGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTTGTGTTAACTAATAGTCAGTTCTTCAACAATAATTTAAAAAATT------------------TAAAAAAATATGTAATTTTGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGTTAACTAATAGTCAGTTCT............................................................26120.08100010
.................................................................TCA--------------------------------------------------------------------AGTGTTTA-------------------------A---------TA--------------------------------------------------------------------------------------------------T--AAATGAAGATATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28140.07100010
droVir3
ATATATATATATATA-----------------------------------------------------------------------TATATATATA-----TAT---------A--------------T---------------------------------------------------------------------------------------------------------------------------------------------------------ATATAAATATATATAT------------------------------------------------------------------------------------------------ATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTGTTGTGAATTTATACACCTAAAATATATTTGTTGATACATACCTGACTTCAATT-----TGAT-----------TT----T---------------------------------------AAA-----------------------------------------------------------------------------------------------------------------------------------------------------GTAAAGTATAATTTTA--------------------------CCTTTCACTTATAATTATTAGGTTGATACTTATTTAAGAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................ATAT------------------------------------------------------------------------------------------------ATATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTGTT...............................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000001000000000000000000000000000000000000000000000
droMoj3
TGGTGCGGCTGCTCAACGAGCTCTTCGGTCGTTTCGATCAGCTGGCGCATGTGAGTTGCACAACAATTCC-----TTAAATCAAG-------------------CATCGATTT------------------------TTTTTATTAAAAA------------------------------ATAAA---------------------------AG---ATGGAGA---------------------------------------------AAGAGAAAAG-------------------ACTGCTACAAAAGTTTTTCCTAATTAAAAAAAAA---------GGAGGTCAAACTTCTCTCTTTCTTTCTCTCTTAT-------------------AGT--TTAGA-------------AA--------------------------CAATTT--TTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAG------------------------------------AAAAATTTTTTTAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAACAGGATATATATACATATATTTTTTGAGTTTCAACAAACCCCATTTTATTTTTAAATTAAAAGAAAAAAA--AATATATATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-ATATA-AATAAGTAGATCGTAAATA-------------------TATCCCTTCTCT--------------------------------------------CTCTATC-TCC--TTCTCATCCTTATAGGATAACCACT--------------------------GCTTGCGCATCAAAATATTGGGCGATTGCTATTACTGTGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......GCTGCTCAACGAGCTCTTCGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAACAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.081100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAAAAAAAAAAAAAAAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
droGri2
AAGTGCTGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGTTTTTACAAAATC-------------------------------------------CTGCATC-GTT--CTCTCTGCCTTACAGGACAATCATT--------------------------GCCTGCGTGTGAAGCTGCTCGGCGATTGCTACTACTGTGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 02:34 PM