ID:

dsi_29514

 Coordinate:

2l:13389496-13389645 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.5 -19.4 -18.8 -18.6

Flybase annnotation

five_prime_UTR [2l_13389202_13389461_+]; CDS [2l_13389462_13389495_+]; exon [2l_13389202_13389495_+]; intron [2l_13389496_13394214_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTAGCCAAAGTCCAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGGTCTCTCCAGCTTCGGCTTGTTTGTTTGTTTTGGCTGTGGACAGCCTCCGGATTCCGGTTCCCGCTTTCGGTTTTTTGGTTTTCTGTTTTCGGTTTTCTGTTTTCGGATTTCGGTTTGTTTACCCGTCTGGCCTTCCATCTAATCAGACATCGTCGTCTGCGGTGATTCCGACATTTTGACTCATTTGCACACGC
****************************************************************************...........(((((..(((((...(((((..((((...(((....)))....)))).........)))))....)))))..)))...))*********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 M023
head
 M053
female body
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
................................GATACACCGAAGAGAACGGACC.................................................................................................................................................................................................... 22 3 1 3.00 3 3 0 0 0 0 0 0 0
.................................ATACACCGAAGAGAACGGACC.................................................................................................................................................................................................... 21 3 1 3.00 3 2 1 0 0 0 0 0 0
CTAGCCAAAGTCCAAGATG....................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0
..............AGATGAGCCACCACTGGGGATAC..................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0
................................................................................................................................................................................................ATCTAATCAGACATCGTCGT...................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................................TTCCATCTAATCAGACATCGTCGG...................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................CTTCCATCTAATCAGACATCG.......................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0
..........................ACTGGGGATACACCGAAGAGAACGGAC..................................................................................................................................................................................................... 27 2 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................TTGTTTGTTTTGGCTGTGGA.......................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0
....................................................AAGGTCTCTCCAGCTTCGGCTTGTT............................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................................................TTTCGGTTTTCTGTTTTCGGATTTC................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
.................................................................................TGTTCTGGCTCTGGGCAGCCTC................................................................................................................................................... 22 3 2 0.50 1 0 0 0 0 1 0 0 0
.............................GGGGATACAGCCAAGGGAACG........................................................................................................................................................................................................ 21 3 2 0.50 1 0 0 0 0 0 1 0 0
...............................................................................................................................................TTCGGTTTGGTGTTTTCGGATA..................................................................................... 22 3 2 0.50 1 0 0 0 0 1 0 0 0
..................................TACACCGAAGAGAACGGACC.................................................................................................................................................................................................... 20 3 3 0.33 1 0 1 0 0 0 0 0 0
............................................................................................................TCCGGCTCCCGCTATCGGAT.......................................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 0 1 0
.............................................................................................................CCGGCTCCCGCTATCGGAT.......................................................................................................................... 19 3 9 0.11 1 0 0 0 0 0 0 1 0
.............................................................................................................CCGGCTCCCGCTATCGGA........................................................................................................................... 18 3 20 0.10 2 0 0 0 0 0 0 2 0
..................................TACTCCGAAAAGAACGG....................................................................................................................................................................................................... 17 2 16 0.06 1 0 0 0 0 0 0 0 1
.....................................................................................................................................................TTTATGTTTTCGGATTT.................................................................................... 17 1 16 0.06 1 0 0 0 0 0 1 0 0
............................................................................................................TCCGGCTCCCGCTATCGGA........................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1 0
...........................................................................................................................................TGTTTTTGGTTTTCTGT.............................................................................................. 17 1 20 0.05 1 0 0 0 0 0 1 0 0

Anti-sense strand reads

GATCGGTTTCAGGTTCTACTCGGTGGTGACCCCTATGTGGCTTCTCTTGCCATTCCAGAGAGGTCGAAGCCGAACAAACAAACAAAACCGACACCTGTCGGAGGCCTAAGGCCAAGGGCGAAAGCCAAAAAACCAAAAGACAAAAGCCAAAAGACAAAAGCCTAAAGCCAAACAAATGGGCAGACCGGAAGGTAGATTAGTCTGTAGCAGCAGACGCCACTAAGGCTGTAAAACTGAGTAAACGTGTGCG
***********************************************************************************...........(((((..(((((...(((((..((((...(((....)))....)))).........)))))....)))))..)))...))**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
.....................................................................................................................................................................................AGACCGGAAGGTAGATTAGTCTGT............................................. 24 0 1 1.00 1 1 0 0 0 0 0
......................................................................CGAACAAACAAACAAAAC.................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................................................................................................................GGCTGTTAAACTGAGTAAACCT..... 22 2 2 0.50 1 0 0 1 0 0 0
....................................................................................................................................................................................CAGGCCGGAAGGTTCATTAG.................................................. 20 3 2 0.50 1 0 0 0 1 0 0
..........................................................................................CCACCTGTCGGAGGCCTACGT........................................................................................................................................... 21 3 4 0.25 1 0 0 1 0 0 0
.............................................................................................................GGCCAAGGGGGAACGCC............................................................................................................................ 17 2 5 0.20 1 0 0 0 0 1 0
.....................................................................................................................................................................................................................AGGCCACTAAGGGTGTATAA................. 20 3 7 0.14 1 0 0 0 0 0 1
....................................................................................................................................................................................CAGGCCGGAAGGTTCATTA................................................... 19 3 9 0.11 1 0 0 0 1 0 0
..............................................................................................................................................................................................TGTCGATTAGTCTGTAGC.......................................... 18 2 12 0.08 1 0 0 0 0 1 0
.....................................................................................................................................................................................................................AGGCCACTAAGGGTGTAGA.................. 19 3 17 0.06 1 0 0 0 0 0 1
..............................................................................................................................................................................................................GCAGCAGGCGCAACTAAAG......................... 19 3 20 0.05 1 0 0 0 1 0 0
....................................................TTCCATAGGTGTCGAAGCC................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0
.............................................................................................................GGCCAAGGGGGAACGCCC........................................................................................................................... 18 3 20 0.05 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:13389446-13389695 + dsi_29514 CT--AG----------CCAA---AGTCCAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGGTCTC--------------------------------------------TCC-AGC-TTC--GGCTT---------GTTTGTTTGTTTTGGCTG------------TG--------------GACAGCCTCCG---GATTCCGGTTCCCGCTTTCGGTTTTTTGGTTTTCTGTTTTCGGTTTTCTGTTTTCGGATTTC------GGTTTGTTTACCC-----------------------------------------------------GTCTGGCCTTCC--ATCTAATCAGACATC---GTC---------G---TCTGC------------------------------------GGTGATTCCGAC------ATTTTGACTCATTTGCA------CACGC
droSec2 scaffold_3:69517-69759 + CT--AG----------CCAA---AGTCCAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGCTCTC--------------------------------------------TCC-AGC-TTC--GGCTT---------GTTTGTTTGTTTTGGCTG------------TG--------------GACAGCCTCCG---GATTCCGGTTCCCGCTTTCGGTTTTTTGGT-------TTTCGGTTTTCTGTTTTCGGATTTC------GGTTTGTTTACCC-----------------------------------------------------GTCTGGCCTTCC--ATCTAATCAGACATC---GTC---------G---TCTGC------------------------------------GGTGATTCCGAC------ATTTTGACTCATTTGCA------CACGC
dm3 chr2L:13803911-13804158 + CCAAAG----------CCAA---AGTCCAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGCTCTC--------------------------------------------TCC-AGC-TTC--GGCTT----GTT-TGTTTGTTTGTTTTCGCTG------------TG--------------GACAGCCTGCG---GATTCCGGTTCCCGCTTTCGGTTT-TTGGT-------TTTCGTTTTTCTGTTTTCGGATTTC------GGTTTGTTTACCC-----------------------------------------------------GTCTGGCCTTCC--GTCTAATCAGACATC---GTC---------G---TCTGC------------------------------------GGTGATTCCGAC------ATTTTGACTCATTTGCA------CACGC
droEre2 scaffold_4929:11661938-11662177 - CT--AG----------CCCA---TAACCAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGCTCTC--------------------------------------------TCC-AGC-TTC--GGCTT---------GTTTGTTTGTTTTGGCT-------------TG--------------GGCAGCCTCCG---GAATCAGGTTCCCGCTTTCGGT---------------TTTCGGATTTCGGGGTTCGGTGTTC------GTTTTGTTTACCC-----------------------------------------------------GTCTGGCCTTCC--GTCTAATCAGCCAAC---GTC---------G---TCTGC------------------------------------GGTGATTCCAAA------TTTTTGACTCACTTGCTCACTTGCACGC
droYak3 2L:10215644-10215893 + CT--AG----------CCCA---AATCCAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGCTCTC--------------------------------------------TCC-AGC-TTC--GACTTCGTTGTT-CGTTTGTTTGTTTTGGCTT------------TC--------------GGCAGCCTCCG---GAATCAGGTTCCCGCTTTTGGATT-TCTGT-------TTTCGGTTTTCAGTTTTCGGTTTTC------GGTTTGTTTACCC-----------------------------------------------------GTCTGGCCTTCC--GTCTAATCAGACATA---GTC---------G---TCTGC------------------------------------GGTGATTCCGAC------TTTTTGACTCATTTGCA------CACGC
droEug1 scf7180000409452:373541-373753 + C---------------CCAA---AAACCAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGCTCTC----------------------------------------------A-A-T-TTTT-G-------------GCTTGTTTGTTTTGAGTT-------------T--------------GACAGCCTCCG---GAATCAGGTTCCCGCT-------------------------------------------TTC------GGTTTGTTTACCA-----------------------------------------------------GTCTGGCCTTCCGTCTCTAATCAGACATC---GCC---GTCAGCG---TCTGCTTC--TGC----------------------------GGTGATTCCGAAT----TTTTTTGACTCATTTGCA------CACGC
droBia1 scf7180000302408:2521894-2522104 - CCC-AG----------CA-A---AAATCAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGCTCTC--------------------------------------------GGC-ATGGTTC--G------------AGCTTGTTTGTTTTGGCTT------------TT--------------GGCAGCCTCCG---GATTCCGGTTCCCGCT-------------------------------------------CTC------GGTTTGTTTACCAGT----C-----------------------------------------T---CGTCTGGCCTTACGCCTCTAATCAGACATC---GCC---------G---TCTGC------------------------------------GGCGGTTCCGA-------TTTTTGACTCACTTGCA------CACGC
droTak1 scf7180000416008:86963-87174 + CT--AT----------TCCA----AATCAAGATGAGCCATCACTGGGGATACACCGAAGAGAACGGTAAGCTCTC----------------------------------------------C-A-C-TTT---------------AATTTGTTTGTTTTGAATTTTTTTTCGGCA-T---------------AACAGCCTCCG---TATTCCGGTTCCCAACT----------------------------------------TTTTC------GGTTTGTTTACCA-----------------------------------------------------GTCTGGCCTTCC--CTCTAATCAGACATC---GCC---------G---TCTGC------------------------------------GGTGGTTCCGAT------TTTTTGACTCATTTGCA------CACGC
droEle1 scf7180000491338:1416834-1417066 + A----T----------CTTA---GCTTCAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGCGCGC------------------------------------------------AGT-TTCTGGGCTT----GTT-TGTTTGTTTGTTTTGAATTTTT----GGCAGTGGCAGTGGTTGGTTAAGCAGCCTCCGGCGAAATCAAGTTCCCGCT-------------------------------------------TTC------GGTTTGTTTACCA-----------------------------------------------------GTCTGGCCTTC---GTCTAATCAGACATC---GCC---------G---TCTGC------------------------------------GGTGGCTCCAAA-----TATTTTGACTCATATGCA------CACGC
droRho1 scf7180000780107:273948-274158 - C----A----------CCAA---TAAACAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGCTCGC------------------------------------------------AGT-TTTG-GGCTC---------GTTTGTTTGTTTTGAATTC------GGCA-AA--------------GGCAGCCTCCGGCGAAATCAAGTTCCCGCT-------------------------------------------TTC------GGTTTGTTTACCA-----------------------------------------------------GTCTGGCCTTC---CTCTAATCAGACATC---GCC---------G---TCTGC------------------------------------GGCAGTTTTAAA-----TTTTTTGACTCATATGCA------CACGC
droFic1 scf7180000453925:187832-188037 - CCT-AT----------T--A---AAACCAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGCTCTC--------------------------------------------TT----T-TTTT-----------TGGGGCTTGTTTGTTTTCATTTTT-----------T--------------GGCAGCCTCCGGCGGAATCAGGTTCCCGCT-------------------------------------------TTC------GGTTTGTTTACCA-----------------------------------------------------GTCTGGCCTTC---CTCTAATCAGACATC---GCC---------G---TCTGC------------------------------------GGCGTTTCAGAG------TTTTTGACTCATTTGCA------CACGC
droKik1 scf7180000302236:157799-158050 - CC--AG----------CT------AACAAAGATGAGCCATCACTGGGGTTACACCGAAGAGAACGGTAAGCTCTC------------GTGCCTTGGCCAGAAAGAGCACTCGCACTCGCTCC-GGT---------------CTC-CACTTGTTTGTTTTGAGTTT------------T--------------GCCAGCTTCCG----AATCAGGTTCCCGCT-------------------------------------------TTGGGCTACGGTTTGTTTACTT--TGCT-------------------------------------CCG--T---TGTCTGGCCTTC---GTCTAATCAGACATC---GCC--------CG---TCTGC------------------------------------TTCGGTTCCGAATTAAGTATTTTGAGTCATATGCA------CACGA
droAna3 scaffold_12916:11975291-11975570 - CC--AC----------CCAA---TAACCAAGATGAGCCACCACTGGGGTTACACCGAGGAGAACGGTAAGCTTGG-AAGCTTCGGTTGTGG--GGGC---GAAGAGCTCT-----TCTCTCCGAGC-T-------------CTT-CGGTTGTTTGTTTTGAATTTTT-T------TTG--------------GACAGCCTCCG-CGGAATCAGGTTCCCGCT-------------------------------------------TTG------GGTTTGTTTATGT--TGTTTACGGGCAAGGC-GGAGAAACCGCTTCTCTT-----------GGGACGTCTGGCCTTC---GTCTAATCAGACATC---GCC---------G---TCTGC------------------------------------TTTTATTTCCA-------TTTTTGAGTCATAGGC--------ACGC
droBip1 scf7180000396769:329464-329738 - CC---TCTAATATCCACCAAATATATCCAAGATGAGCCACCACTGGGGTTACACCGAGGAGAACGGTAAGCCT-CGAAGC---GGTTGTGG--GAGCT--GGAG-------------------AGC--------------TCTT-CGTTTGTTTGTTTTGAATTTTT-T------TCG--------------GACAGCCTCCGCC-GAATCAGGTTCCCGCT-------------------------------------------GTG------GGTTTGTTTATGT--TGTTTACG-GCAAAGC-GGAGAAACCGCTTCTCTT-----------GGGACGTCTGGCCTTC---GTCTAATCAGACATC---GCC---------G---TCTGC------------------------------------TTTTATGCCCA-------TTTTTGAGTCATATGC--------ACGC
dp5 4_group4:5926195-5926464 - A----G----------TCCG-----AGCAAGATGAGCCACCACTGGGGTTACACCGAGGAGAACGGTAAGCCTTC--------------------------------------------GCG-AGCGATT--G---CCGCTGTC-TGTTTGCTTGCTTTGACCGAT-----------C--------------GGTAAAC-------GAAACA-------GCT-------------------------------------------TTG------GGTTTGTTTACCGAT----T----------GCCGA-AAACCACTTCCCTTCTCGCTCTTCTG---CGTCCGGCCTTC---GTTCAGTCAGACAGGTCTGCT--------TG---TCTGCTTTTCTGCTCCGTCTTTCCCGCGCCTTACCGCCCAGATTGATG--GAG-----ATTATTGAGTCACACGC--------ACGC
droPer2 scaffold_16:978021-978290 + A----G----------TCCG-----AGCAAGATGAGCCACCACTGGGGTTACACCGAGGAGAACGGTAAGCCTTC--------------------------------------------GCG-AGCGATC--G---CCGCTGTC-TGTTTGCTTGCTTTGACCGAT-----------C--------------GGTAACC-------GAAACA-------GCT-------------------------------------------TTG------GGTTTGTTTACCGAT----T----------GCCGA-AAACCACTTCCCTTCTCGCTCTTCTG---CGTCCGGCCTTC---GTTCAGTCAGACAGGTCTGCT--------TG---TCTGCTTTTCTGCTCCGTCTTTCCCGCGCCTTACCGCCCAGATTGATG--GAG-----ATTATTGAGTCACACGC--------ACGC
droWil2 scf2_1100000004585:7140213-7140377 - A----A----------CT-------AACAAGATGAGCCATCACTGGGGTTACACCGAAGAGAATGGTAAGGCT-T---------------------------------------------------------G---TTATTGTGTGTTTTGTTTGTTTTCAATTAT--------------------------------------------------------------------------------------GCGGTTTCCAGTTTTG------AGTTTGTTTACCA-----------------------------------------------------A-----------------AAATAAAAA-T---GCGATCTTCAGTGATGTCTGT------------------------------------G----TT--GTG------ATTTTGAGTC--------------ACGT
droVir3 scaffold_12723:740000-740052 + A----G----------ATCA---ATTTTAAAATGAGCCATCACTGGGGCTATACGGAAGAGAACGGTAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15252:4277049-4277097 + C------------------A---ATTCTAAGATGAGCCATCACTGGGGCTACACCGAAGAGAACGGTAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CT--AG----------CCAA---AGTCCAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGGTCTC--------------------------------------------TCC-AGC-TTC--GGCTT---------GTTTGTTTGTTTTGGCTG------------TG--------------GACAGCCTCCG---GATTCCGGTTCCCGCTTTCGGTTTTTTGGTTTTCTGTTTTCGGTTTTCTGTTTTCGGATTTC------GGTTTGTTTACCC-----------------------------------------------------GTCTGGCCTTCC--ATCTAATCAGACATC---GTC---------G---TCTGC------------------------------------GGTGATTCCGAC------ATTTTGACTCATTTGCA------CACGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................GATACACCGAAGAGAACGGACC......................................................................................................................................................................................................................................................................................................................................................................................................................2213.00300300000000000000
................................................ATACACCGAAGAGAACGGACC......................................................................................................................................................................................................................................................................................................................................................................................................................2113.00301200000000000000
CT--AG----------CCAA---AGTCCAAGATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
.............................AGATGAGCCACCACTGGGGATAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................ATCTAATCAGACATC---GTC---------G---T......................................................................................2011.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................TTCC--ATCTAATCAGACATC---GTC---------G---G......................................................................................2411.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................CTTCC--ATCTAATCAGACATC---G......................................................................................................2111.00110000000000000000
.........................................ACTGGGGATACACCGAAGAGAACGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
....................................................................................................................................................TTGTTTGTTTTGGCTG------------TG--------------GA.........................................................................................................................................................................................................................................................................................2011.00101000000000000000
...................................................................AAGGTCTC--------------------------------------------TCC-AGC-TTC--GGCTT---------GTT......................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
...................................................................................................................................................................................................................................................TTTCGGTTTTCTGTTTTCGGATTTC------.........................................................................................................................................................................................................2511.00101000000000000000
.................................................TACACCGAAGAGAACGGACC......................................................................................................................................................................................................................................................................................................................................................................................................................2030.33101000000000000000
droSec2
CT--AG----------CCAA---AGTCCAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGCTCTC--------------------------------------------TCC-AGC-TTC--GGCTT---------GTTTGTTTGTTTTGGCTG------------TG--------------GACAGCCTCCG---GATTCCGGTTCCCGCTTTCGGTTTTTTGGT-------TTTCGGTTTTCTGTTTTCGGATTTC------GGTTTGTTTACCC-----------------------------------------------------GTCTGGCCTTCC--ATCTAATCAGACATC---GTC---------G---TCTGC------------------------------------GGTGATTCCGAC------ATTTTGACTCATTTGCA------CACGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....AG----------CCAA---AGTCCAAGATGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030210
..........................CCAAGATGAGCCACCACTGGGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030210
..........................CCAAGATGAGCCACCACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020020
..........................CCAAGATGAGCCACCACTGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020110
..............................................GGATACACCGAAGAGAACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200
..............................GATGAGCCACCACTGGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020020
...............................ATGAGCCACCACTGGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020011
..............................GATGAGCCACCACTGGGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020110
........................GTCCAAGATGAGCCACCACTGGGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
............................AAGATGAGCCACCACTGGGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
....AG----------CCAA---AGTCCAAGATGAGCCACCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
.......................AGTCCAAGATGAGCCACCACTGGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
............................................................................................................................................................................................................................................................................................................................................................TTCC--ATCTAATCAGACATC---GTC---------...........................................................................................2211.0010001
...............................................GATACACCGAAGAGAACG..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...........................CAAGATGAGCCACCACTGGGGATACACC....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
....AG----------CCAA---AGTCCAAGATGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000
...............................................GATACACCGAAGAGAACGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...........................CAAGATGAGCCACCACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.................................................................GTAAGCTCTC--------------------------------------------TCC-AGC-TTC--G......................................................................................................................................................................................................................................................................................................................................................2011.0011000
...................A---AGTCCAAGATGAGCCACCACTGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
...................................................................................................................................................................................................................................................................TCGGATTTC------GGTTTGTTTACC.............................................................................................................................................................................................2111.0011000
..................AA---AGTCCAAGATGAGCCACCACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.............................AGATGAGCCACCACTGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
..........................................CTGGGGATACACCGAAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
....................................................ACCGAAGAGAACGGTAAGCTCTC--------------------------------------------TCC-AGC-............................................................................................................................................................................................................................................................................................................................................................2911.0010100
............................AAGATGAGCCACCACTGGGGATACACC....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
............................AAGATGAGCCACCACTGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.................CAA---AGTCCAAGATGAGCCACCACTGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000
...................................................................................................................................................................................................................................TTTTTTGGT-------TTTCGGTTTTCT............................................................................................................................................................................................................................2111.0011000
.................CAA---AGTCCAAGATGAGCCACCACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
dm3
CCAAAG----------CCAA---AGTCCAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGCTCTC--------------------------------------------TCC-AGC-TTC--GGCTT----GTT-TGTTTGTTTGTTTTCGCTG------------TG--------------GACAGCCTGCG---GATTCCGGTTCCCGCTTTCGGTTT-TTGGT-------TTTCGTTTTTCTGTTTTCGGATTTC------GGTTTGTTTACCC-----------------------------------------------------GTCTGGCCTTCC--GTCTAATCAGACATC---GTC---------G---TCTGC------------------------------------GGTGATTCCGAC------ATTTTGACTCATTTGCA------CACGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................CAAGATGAGCCACCACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000
..............................GATGAGCCACCACTGGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000
........................GTCCAAGATGAGCCACCACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................ACTGGGGATACACCGAAGAGAACG..........................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000
............................AAGATGAGCCACCACTGGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
CCAAAG----------CCAA---AGTCCAAGATGAGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000
...............................ATGAGCCACCACTGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GAGCCACCACTGGGGATAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................GATGAGCCACCACTGGGGATA........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.................CAA---AGTCCAAGATGAGCCACCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GATACACCGAAGAGAACGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................................................................................................................................................................................................................................................................CCTTCC--GTCTAATCAGACATC---GTC---------G---.......................................................................................2511.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAG----------CCAA---AGTCCAAGATGAGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGAGCCACCACTGGGGATAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................ATGAGCCACCACTGGGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................T-TTGGT-------TTTCGTTTTTCTGT..........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ATGAGCCACCACTGGGGATA........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGAGCCACCACTGGGGATACT......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...............................ATGAGCCACCACTGGGGATACAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
............................AAGATGAGCCACCACTGGGGATACA......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................................CCACTGGGGATACACCGAAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................C--GTCTAATCAGACATC---GTC---------G---T......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.CAAAG----------CCAA---AGTCCAAGATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................ACCACTGGGGATACACCGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GCCACCACTGGGGATACACCGAAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................G------------TG--------------GACAGCCTGCG---GATTCCG......................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................TGCG---GATTCCGGTTCCCGCTTTCGGT.......................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CACTGGGGATACACCGAAGAGAACG..........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...................................................................................................................................................................................................................................................................................GTTTGTTTACCC-----------------------------------------------------GTCTGGCCTT.............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AGATGAGCCACCACTGGGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................GTCCAAGATGAGCCACCACTGGGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CAA---AGTCCAAGATGAGCCACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.......................................CCACTGGGGATACACCGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................GGATACACCGAAGAGAACG..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
............................................GGGGATACACCGAAGAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................CTGGGGATACACCGAAGAGAACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................AGATGAGCCACCACTGGGGATA........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................GGATACACCGAAGAGAACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
..................................AGCCACCACTGGGGATACACCGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...............................................................................................................................................T-TGTTTGTTTGTTTTCGCTG------------T..........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................ACCACTGGGGATACACCGAAGAGAACGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................TTGTTTGTTTTCGCTG------------TG--------------GAC........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...............................ATGAGCCACCACTGGGGATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GATACACCGAAGAGAACG..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............................................GGATACACCGAAGAGAACGGG........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
CCAAAG----------CCAA---AGTCCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................ACTGGGGATACACCGAAGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ATGAGCCACCACTGGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.............................AGATGAGCCACCACTGGGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GGTTTGTTTACCC-----------------------------------------------------GTCTGGCC...............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TGTTTGTTTGTTTTCGCTG------------TG--------------T..........................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CT--AG----------CCCA---TAACCAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGCTCTC--------------------------------------------TCC-AGC-TTC--GGCTT---------GTTTGTTTGTTTTGGCT-------------TG--------------GGCAGCCTCCG---GAATCAGGTTCCCGCTTTCGGT---------------TTTCGGATTTCGGGGTTCGGTGTTC------GTTTTGTTTACCC-----------------------------------------------------GTCTGGCCTTCC--GTCTAATCAGCCAAC---GTC---------G---TCTGC------------------------------------GGTGATTCCAAA------TTTTTGACTCACTTGCTCACTTGCACGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................A---TAACCAAGATGAGCCACCACTGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................26112.00121110810
...................A---TAACCAAGATGAGCCACCACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................2516.0062000310
...................A---TAACCAAGATGAGCCACCACTGGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2715.0051000310
..............................GATGAGCCACCACTGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000040
..............................GATGAGCCACCACTGGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000300
...............................................GATACACCGAAGAGAACGG.........................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020001100
..................CA---TAACCAAGATGAGCCACCACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0021000100
...................A---TAACCAAGATGAGCCACCACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020100010
...................A---TAACCAAGATGAGCCACCACTGGGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0021000100
...........................CAAGATGAGCCACCACTGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000110
..................................AGCCACCACTGGGGATACACCGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
...............................................GATACACCGAAGAGAACGGACC......................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
..................................AGCCACCACTGGGGATACACCGAAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
................................................ATACACCGAAGAGAACGGACC......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
............................AAGATGAGCCACCACTGGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
..................CA---TAACCAAGATGAGCCACCACTGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
................................................ATACACCGAAGAGAACGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.......................TAACCAAGATGAGCCACCACTGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
...........................CAAGATGAGCCACCACTGGGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
........................AACCAAGATGAGCCACCACTGGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
..................................AGCCACCACTGGGGATACACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000
.................................................TACACCGAAGAGAACGGACC......................................................................................................................................................................................................................................................................................................................................................................................................................2021.0021100000
.......................TAACCAAGATGAGCCACCACTGGGGATAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000
.............................AGATGAGCCACCACTGGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
....................................................................................................................................................................................................................................................................................TTTGTTTACCC-----------------------------------------------------GTCTGGC................................................................................................................................1811.0010000010
.............................................GGGATACACCGAAGAGAACGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
......................................................................................................................................................................................................................................................................................................................................................................AATCAGCCAAC---GTC---------G---TCTGC------------------------------------GGTGA.........................................2511.0010000010
...............................ATGAGCCACCACTGGGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
............................................GGGGATACACCGAAGAGAACG..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................AAC---GTC---------G---TCTGC------------------------------------GGTGAT........................................1811.0010000010
..........................................CTGGGGATACACCGAAGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.............................AGATGAGCCACCACTGGGGATACACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
...................................GCCACCACTGGGGATACACCGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
......................................ACCACTGGGGATACACCGAAGAGAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
...........................CAAGATGAGCCACCACTGGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
...................A---TAACCAAGATGAGCCACCACTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
.......................TAACCAAGATGAGCCACCACTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
........................AACCAAGATGAGCCACCACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
............................................GGGGATACACCGAAGAGAACGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
............................AAGATGAGCCACCACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
..................................AGCCACCACTGGGGATACACCGAAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
....................................CCACCACTGGGGATACACCGAAGAGAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
........................AACCAAGATGAGCCACCACTGGGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
........................AACCAAGATGAGCCACCACTGGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
........................AACCAAGATGAGCCACCACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
.........................ACCAAGATGAGCCACCACTGGGGATACAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000100
...................................GCCACCACTGGGGATACACCGAAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.......................................CCACTGGGGATACACCGAAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
......................................................................................................................................................................................................................................................................................................................................................................AATCAGCCAAC---GTC---------G---TCTGC------------------------------------GGT...........................................2311.0010000100
.....................................CACCACTGGGGATACACCGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
................................TGAGCCACCACTGGGGATAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.................................GAGCCACCACTGGGGATACACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
..............................GATGAGCCACCACTGGGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
..................................................ACACCGAAGAGAACGGACC......................................................................................................................................................................................................................................................................................................................................................................................................................19160.0611000000
droYak3
CT--AG----------CCCA---AATCCAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGCTCTC--------------------------------------------TCC-AGC-TTC--GACTTCGTTGTT-CGTTTGTTTGTTTTGGCTT------------TC--------------GGCAGCCTCCG---GAATCAGGTTCCCGCTTTTGGATT-TCTGT-------TTTCGGTTTTCAGTTTTCGGTTTTC------GGTTTGTTTACCC-----------------------------------------------------GTCTGGCCTTCC--GTCTAATCAGACATA---GTC---------G---TCTGC------------------------------------GGTGATTCCGAC------TTTTTGACTCATTTGCA------CACGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................GATGAGCCACCACTGGGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00300000030000
................................................ATACACCGAAGAGAACGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2012.00201000010000
...........................CAAGATGAGCCACCACTGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000020000
..........................................CTGGGGATACACCGAAGAGAACG..........................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200000020000
..............................GATGAGCCACCACTGGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
................................................................................................................................................................................................GGCAGCCTCCG---GAATCAGG.....................................................................................................................................................................................................................................................................1911.00100000100000
.............................................GGGATACACCGAAGAGAACGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...................A---AATCCAAGATGAGCCACCACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000100000
............................................GGGGATACACCGAAGAGAACG..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...................................GCCACCACTGGGGATACACCGAAGAGAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
.....................................CACCACTGGGGATACACCGAAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
........................ATCCAAGATGAGCCACCACTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000
........................................CACTGGGGATACACCGAAGAGAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
........................ATCCAAGATGAGCCACCACTGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.......................AATCCAAGATGAGCCACCACTGGGGATAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
...........................CAAGATGAGCCACCACTGGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.....................................CACCACTGGGGATACACCGAAGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.......................................................................................................................................................................................................................................................................................GTTTACCC-----------------------------------------------------GTCTGGCCTTCC--.........................................................................................................................2011.00110000000000
...............................ATGAGCCACCACTGGGGATACACC....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...................................GCCACCACTGGGGATACACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
............................AAGATGAGCCACCACTGGGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.............................AGATGAGCCACCACTGGGGATACACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
................................................ATACACCGAAGAGAACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..............................................GGATACACCGAAGAGAACG..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..................CA---AATCCAAGATGAGCCACCACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.....G----------CCCA---AATCCAAGATGAGCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.............................................GGGATACACCGAAGAGAACG..........................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...............................................GATACACCGAAGAGAACGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000
................CCCA---AATCCAAGATGAGCCACCACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
....AG----------CCCA---AATCCAAGATGAGCCACCACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000
........................................................................................................................................................................................................................CCCGCTTTTGGATT-TCTGT-------TTTCGGT.................................................................................................................................................................................................................................2611.00100000010000
................................................ATACACCGAAGAGAACGGACC......................................................................................................................................................................................................................................................................................................................................................................................................................2130.33110000000000
..................................................ACACCGAAGAGAACGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................1830.33110000000000
........................................................................................................................................................................................................................................................GTTTTCAGTTTTCGGTTTTC------.........................................................................................................................................................................................................2070.14100100000000
droEug1
C---------------CCAA---AAACCAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGCTCTC----------------------------------------------A-A-T-TTTT-G-------------GCTTGTTTGTTTTGAGTT-------------T--------------GACAGCCTCCG---GAATCAGGTTCCCGCT-------------------------------------------TTC------GGTTTGTTTACCA-----------------------------------------------------GTCTGGCCTTCCGTCTCTAATCAGACATC---GCC---GTCAGCG---TCTGCTTC--TGC----------------------------GGTGATTCCGAAT----TTTTTTGACTCATTTGCA------CACGCSizeHit CountTotal NormTotal
No Reads
droBia1
CCC-AG----------CA-A---AAATCAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGCTCTC--------------------------------------------GGC-ATGGTTC--G------------AGCTTGTTTGTTTTGGCTT------------TT--------------GGCAGCCTCCG---GATTCCGGTTCCCGCT-------------------------------------------CTC------GGTTTGTTTACCAGT----C-----------------------------------------T---CGTCTGGCCTTACGCCTCTAATCAGACATC---GCC---------G---TCTGC------------------------------------GGCGGTTCCGA-------TTTTTGACTCACTTGCA------CACGCSizeHit CountTotal NormTotal
No Reads
droTak1
CT--AT----------TCCA----AATCAAGATGAGCCATCACTGGGGATACACCGAAGAGAACGGTAAGCTCTC----------------------------------------------C-A-C-TTT---------------AATTTGTTTGTTTTGAATTTTTTTTCGGCA-T---------------AACAGCCTCCG---TATTCCGGTTCCCAACT----------------------------------------TTTTC------GGTTTGTTTACCA-----------------------------------------------------GTCTGGCCTTCC--CTCTAATCAGACATC---GCC---------G---TCTGC------------------------------------GGTGGTTCCGAT------TTTTTGACTCATTTGCA------CACGCSizeHit CountTotal NormTotal
No Reads
droEle1
A----T----------CTTA---GCTTCAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGCGCGC------------------------------------------------AGT-TTCTGGGCTT----GTT-TGTTTGTTTGTTTTGAATTTTT----GGCAGTGGCAGTGGTTGGTTAAGCAGCCTCCGGCGAAATCAAGTTCCCGCT-------------------------------------------TTC------GGTTTGTTTACCA-----------------------------------------------------GTCTGGCCTTC---GTCTAATCAGACATC---GCC---------G---TCTGC------------------------------------GGTGGCTCCAAA-----TATTTTGACTCATATGCA------CACGCSizeHit CountTotal NormTotal
No Reads
droRho1
C----A----------CCAA---TAAACAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGCTCGC------------------------------------------------AGT-TTTG-GGCTC---------GTTTGTTTGTTTTGAATTC------GGCA-AA--------------GGCAGCCTCCGGCGAAATCAAGTTCCCGCT-------------------------------------------TTC------GGTTTGTTTACCA-----------------------------------------------------GTCTGGCCTTC---CTCTAATCAGACATC---GCC---------G---TCTGC------------------------------------GGCAGTTTTAAA-----TTTTTTGACTCATATGCA------CACGCSizeHit CountTotal NormTotal
No Reads
droFic1
CCT-AT----------T--A---AAACCAAGATGAGCCACCACTGGGGATACACCGAAGAGAACGGTAAGCTCTC--------------------------------------------TT----T-TTTT-----------TGGGGCTTGTTTGTTTTCATTTTT-----------T--------------GGCAGCCTCCGGCGGAATCAGGTTCCCGCT-------------------------------------------TTC------GGTTTGTTTACCA-----------------------------------------------------GTCTGGCCTTC---CTCTAATCAGACATC---GCC---------G---TCTGC------------------------------------GGCGTTTCAGAG------TTTTTGACTCATTTGCA------CACGCSizeHit CountTotal NormTotal
No Reads
droKik1
CC--AG----------CT------AACAAAGATGAGCCATCACTGGGGTTACACCGAAGAGAACGGTAAGCTCTC------------GTGCCTTGGCCAGAAAGAGCACTCGCACTCGCTCC-GGT---------------CTC-CACTTGTTTGTTTTGAGTTT------------T--------------GCCAGCTTCCG----AATCAGGTTCCCGCT-------------------------------------------TTGGGCTACGGTTTGTTTACTT--TGCT-------------------------------------CCG--T---TGTCTGGCCTTC---GTCTAATCAGACATC---GCC--------CG---TCTGC------------------------------------TTCGGTTCCGAATTAAGTATTTTGAGTCATATGCA------CACGASizeHit CountTotal NormTotal
No Reads
droAna3
CC--AC----------CCAA---TAACCAAGATGAGCCACCACTGGGGTTACACCGAGGAGAACGGTAAGCTTGG-AAGCTTCGGTTGTGG--GGGC---GAAGAGCTCT-----TCTCTCCGAGC-T-------------CTT-CGGTTGTTTGTTTTGAATTTTT-T------TTG--------------GACAGCCTCCG-CGGAATCAGGTTCCCGCT-------------------------------------------TTG------GGTTTGTTTATGT--TGTTTACGGGCAAGGC-GGAGAAACCGCTTCTCTT-----------GGGACGTCTGGCCTTC---GTCTAATCAGACATC---GCC---------G---TCTGC------------------------------------TTTTATTTCCA-------TTTTTGAGTCATAGGC--------ACGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................AACCAAGATGAGCCACCACTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002101000
........................AACCAAGATGAGCCACCACTGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002100010
...................................GCCACCACTGGGGTTACACCGAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..............................GATGAGCCACCACTGGGGTTACACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
........................AACCAAGATGAGCCACCACTGGGGTTA........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
..................AA---TAACCAAGATGAGCCACCACTGGGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
........................AACCAAGATGAGCCACCACTGGGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...................A---TAACCAAGATGAGCCACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
....AC----------CCAA---TAACCAAGATGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.................................................TACACCGAGGAGAACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
...............................ATGAGCCACCACTGGGGTTACACCGAGG................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010
............................AAGATGAGCCACCACTGGGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
...............................ATGAGCCACCACTGGGGTTACACCGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
...............................ATGAGCCACCACTGGGGTTACACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
droBip1
CC---TCTAATATCCACCAAATATATCCAAGATGAGCCACCACTGGGGTTACACCGAGGAGAACGGTAAGCCT-CGAAGC---GGTTGTGG--GAGCT--GGAG-------------------AGC--------------TCTT-CGTTTGTTTGTTTTGAATTTTT-T------TCG--------------GACAGCCTCCGCC-GAATCAGGTTCCCGCT-------------------------------------------GTG------GGTTTGTTTATGT--TGTTTACG-GCAAAGC-GGAGAAACCGCTTCTCTT-----------GGGACGTCTGGCCTTC---GTCTAATCAGACATC---GCC---------G---TCTGC------------------------------------TTTTATGCCCA-------TTTTTGAGTCATATGC--------ACGCSizeHit CountTotal NormTotal
No Reads
dp5
A----G----------TCCG-----AGCAAGATGAGCCACCACTGGGGTTACACCGAGGAGAACGGTAAGCCTTC--------------------------------------------GCG-AGCGATT--G---CCGCTGTC-TGTTTGCTTGCTTTGACCGAT-----------C--------------GGTAAAC-------GAAACA-------GCT-------------------------------------------TTG------GGTTTGTTTACCGAT----T----------GCCGA-AAACCACTTCCCTTCTCGCTCTTCTG---CGTCCGGCCTTC---GTTCAGTCAGACAGGTCTGCT--------TG---TCTGCTTTTCTGCTCCGTCTTTCCCGCGCCTTACCGCCCAGATTGATG--GAG-----ATTATTGAGTCACACGC--------ACGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................GCAAGATGAGCCACCACTGGGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
..............................GATGAGCCACCACTGGGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAGATTGATG--GAG-----ATTATTGAG....................2511.0010100000000
..........................GCAAGATGAGCCACCACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................TCCG-----AGCAAGATGAGCCACCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
A----G----------TCCG-----AGCAAGATGAGCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................AAGATGAGCCACCACTGGGGTTACACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000001000
...............................ATGAGCCACCACTGGGGTTACACC....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.....................................CACCACTGGGGTTACACCGAGGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...................................GCCACCACTGGGGTTACACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
droPer2
A----G----------TCCG-----AGCAAGATGAGCCACCACTGGGGTTACACCGAGGAGAACGGTAAGCCTTC--------------------------------------------GCG-AGCGATC--G---CCGCTGTC-TGTTTGCTTGCTTTGACCGAT-----------C--------------GGTAACC-------GAAACA-------GCT-------------------------------------------TTG------GGTTTGTTTACCGAT----T----------GCCGA-AAACCACTTCCCTTCTCGCTCTTCTG---CGTCCGGCCTTC---GTTCAGTCAGACAGGTCTGCT--------TG---TCTGCTTTTCTGCTCCGTCTTTCCCGCGCCTTACCGCCCAGATTGATG--GAG-----ATTATTGAGTCACACGC--------ACGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....G----------TCCG-----AGCAAGATGAGCCACCACTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
..........................GCAAGATGAGCCACCACTGGGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
........................................CACTGGGGTTACACCGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.................................GAGCCACCACTGGGGTTACACCGAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.........................................ACTGGGGTTACACCGAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...............................................GTTACACCGAGGAGAACG..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...............................................GTTACACCGAGGAGAACGGACC......................................................................................................................................................................................................................................................................................................................................................................................................................2220.501100000
droWil2
A----A----------CT-------AACAAGATGAGCCATCACTGGGGTTACACCGAAGAGAATGGTAAGGCT-T---------------------------------------------------------G---TTATTGTGTGTTTTGTTTGTTTTCAATTAT--------------------------------------------------------------------------------------GCGGTTTCCAGTTTTG------AGTTTGTTTACCA-----------------------------------------------------A-----------------AAATAAAAA-T---GCGATCTTCAGTGATGTCTGT------------------------------------G----TT--GTG------ATTTTGAGTC--------------ACGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................GATGAGCCATCACTGGGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................1914.00400130
.........................AACAAGATGAGCCATCACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................2214.00400310
.........................AACAAGATGAGCCATCACTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00300300
...........................................................................................................................................................................................................................................................................................................................................................................AAAA-T---GCGATCTTCAGTGAT........................................................................................2012.00220000
..............................GATGAGCCATCACTGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200020
..........................................CTGGGGTTACACCGAAGAGAATGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
..............................GATGAGCCATCACTGGGGTTACA......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
....................................................................................................................................................................AT--------------------------------------------------------------------------------------GCGGTTTCCAGTTTTG------A........................................................................................................................................................................................................1911.00100010
...............................ATGAGCCATCACTGGGGTTACA......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
...............................................GTTACACCGAAGAGAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.........................................ACTGGGGTTACACCGAAGAGAATGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
......................................................................................................................................................................................................................................................................................................................................................................................GATCTTCAGTGATGTCTGT------------------------------------G----TT--GT...................................2411.00100100
.............................AGATGAGCCATCACTGGGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.............................AGATGAGCCATCACTGGGGTTACACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
.............................AGATGAGCCATCACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..............................GATGAGCCATCACTGGGGTTAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..............................GATGAGCCATCACTGGGGTTACAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
..............................................GGTTACACCGAAGAGAATGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
..........................ACAAGATGAGCCATCACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
................................................TTACACCGAAGAGAATGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2021.00220000
..............................................GGTTACACCGAAGAGAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.............................................GGGTTACACCGAAGAGAATGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
.................................GAGCCATCACTGGGGTTACACCGAAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
................CT-------AACAAGATGAGCCATCACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
.........................AACAAGATGAGCCATCACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
droVir3
A----G----------ATCA---ATTTTAAAATGAGCCATCACTGGGGCTATACGGAAGAGAACGGTAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................GGCTATACGGAAGAGAACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000100001000000000000000000000000000000000000000000000000000000
.................................GAGCCATCACTGGGGCTATACGGAAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................2712.002000000000000000000000000000002000000000000000000000000000000000
..................CA---ATTTTAAAATGAGCCATCACTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...................A---ATTTTAAAATGAGCCATCACTGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
......................................ATCACTGGGGCTATACGGAAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.....................................CATCACTGGGGCTATACGGAAGAGAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
....................................CCATCACTGGGGCTATACGGAAGAGAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
.....G----------ATCA---ATTTTAAAATGAGCCATCACTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
...............................................GCTATACGGAAGAGAACG..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
droGri2
C------------------A---ATTCTAAGATGAGCCATCACTGGGGCTACACCGAAGAGAACGGTAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................A---ATTCTAAGATGAGCCATCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
............................................GGGGCTACACCGAAGAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110

Generated: 05/18/2015 at 10:25 AM