ID:

dsi_29391

 Coordinate:

3l:12463491-12463664 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [3l_12463665_12463715_+]; CDS [3l_12463665_12463715_+]; exon [3l_12462375_12463490_+]; CDS [3l_12462375_12463490_+]; Antisense to three_prime_UTR [3l_12463591_12464041_-]; Antisense to exon [3l_12463591_12464529_-]; intron [3l_12463491_12463664_+]

No Repeatable elements found

mature
star
  1. 2l:18416249-18416263 +
  2. 2l:22419293-22419307 -
  3. 2r:1592720-1592734 +
  4. 2r:1641892-1641906 +
  5. 3l:10070086-10070100 -
  6. dsi_29391  3l:12463614-12463628 +
  7. 3r:18865078-18865092 +
  8. 4:730431-730445 +
  9. x:9954454-9954468 -
  10. x:16761377-16761391 +
  11. node_26155:8401-8415 +
  12. node_5193:2-16 -

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCAGGATACGGTGTCGTTCCGAGGAATGTGCTGAGGCAGCATCGAGATGCGTAAGTAGAAATCATTATGAAACATATGATTATTTCTATTGATCTTAGCTATACGATTTCGTAATGATTTTGATTTCTTTATAAATTGTCAGCAGACTTCGTTTATCATATAATTTATTACCTTTTACAAATTTTGAAATGATTATCACATATATTCCATACTTTTTTTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATA
********************************************************************************************************************************************................................................************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M023
head
 O002
Head
 SRR902009
testis
 M053
female body
 SRR553488
RT_0-2 hours eggs
............................................................................................................................................AGCAGACTTCGTTTATCATAT................................................................................................................. 21 0 1 2.00 2 0 0 0 0 2 0 0 0
.....................................................................................................................................................................................................................................................TTTGATGAACGTGAACATGCC........ 21 0 1 2.00 2 0 0 0 2 0 0 0 0
...............................................................................................................................................................................................................................................AGTGTCTTTGATGAACGTGAACATG.......... 25 0 1 2.00 2 0 1 1 0 0 0 0 0
..................CCGAGGAATGTGCTGAGGCGG........................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0
...............................TGAGGCAGCATCGAGATGCA............................................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................GTCTTTGATGAACGTGAACAT........... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
......TACGGTGTCGTTCCGAGGAATGTGC................................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
..............CGTTCCGAGGAGTGTGCTGAGGC............................................................................................................................................................................................................................................. 23 1 1 1.00 1 0 0 0 0 0 0 1 0
...................................................................................................................................................................................................................................................TCTTTGATGAACGTGAACATGC......... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................TGCAACTTATGATTATTTGTA.......................................................................................................................................................................................... 21 3 10 0.50 5 0 5 0 0 0 0 0 0
.........................................................................................................................................GTCAGTAGACTTCTTTTATCT.................................................................................................................... 21 3 2 0.50 1 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................TGCTGAAAGTGTCCTTGATGA..................... 21 3 4 0.50 2 0 0 2 0 0 0 0 0
...............................................................................................................................TTTGTAAATTGTCAGCAG................................................................................................................................. 18 1 2 0.50 1 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................................................................................TGAACGTGGACATGC......... 15 1 18 0.33 6 0 0 4 0 0 0 0 2
...................................................................................................................................................................................................................................................ACTTAGATGAACGTGGACAT........... 20 3 7 0.14 1 0 0 0 0 0 1 0 0
...................................................................................................................................................TTCGTTTATCCTATAATG............................................................................................................. 18 2 7 0.14 1 0 0 0 0 0 0 0 1
.............................................GATGCGTAAGTAAAAA..................................................................................................................................................................................................................... 16 1 10 0.10 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................TTTACAAATTTTGAA...................................................................................... 15 0 12 0.08 1 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................CGCTAGAAGTTTCTTTG......................... 17 2 16 0.06 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................GAACCTGAACCTGGCGTTT.... 19 3 16 0.06 1 0 0 0 0 0 1 0 0
............................................AGATGCGTAAGGAGA....................................................................................................................................................................................................................... 15 1 17 0.06 1 1 0 0 0 0 0 0 0
................................................................................................................................TTATAAATTGTCAGCT.................................................................................................................................. 16 1 20 0.05 1 0 1 0 0 0 0 0 0
.................................................................................................................................TATAAATTGTCAGCT.................................................................................................................................. 15 1 20 0.05 1 0 0 1 0 0 0 0 0
.............................................GATGCGTAAGGAGAAAA.................................................................................................................................................................................................................... 17 2 20 0.05 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

------------------------------------------------------------------------------------------------------------------------------------------------------############################################################################################################################
GGTCCTATGCCACAGCAAGGCTCCTTACACGACTCCGTCGTAGCTCTACGCATTCATCTTTAGTAATACTTTGTATACTAATAAAGATAACTAGAATCGATATGCTAAAGCATTACTAAAACTAAAGAAATATTTAACAGTCGTCTGAAGCAAATAGTATATTAAATAATGGAAAATGTTTAAAACTTTACTAATAGTGTATATAAGGTATGAAAAAAAAAATCTATTTGATGCGATTTTCACAGAAACTACTTGCACTTGTACGGCAAAATAT
**************************************************************************************................................................******************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 M023
head
 M053
female body
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
...................................................................................................................................................................................................AGTGTATATAAGGTATGAAAA.......................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................ACAGTCGTCTGAAGCAAATAGTAT.................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................TCACAGAAACTACTTGCACTT.............. 21 0 1 1.00 1 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................ACTACTTGCACTTGTACGGC....... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................AATAGTGTTTATAAGGTATCA............................................................. 21 2 2 0.50 1 0 0 0 1 0 0 0 0
...................................................................ACGTTGGATACTAATAAACAT.......................................................................................................................................................................................... 21 3 4 0.25 1 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................................ACGCATGAGAAAAAAAATCTA................................................ 21 3 5 0.20 1 0 0 0 0 0 1 0 0
..TCCTATGCGACAGCA................................................................................................................................................................................................................................................................. 15 1 9 0.11 1 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................................................AAACTACTTGGACTT.............. 15 1 14 0.07 1 0 0 0 0 0 0 0 1
........................................TAGCTCAACTCATTCAT......................................................................................................................................................................................................................... 17 2 19 0.05 1 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................CCACTAGTACGGCAAAA... 17 2 19 0.05 1 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................AGGTATGAAGAAAAA...................................................... 15 1 20 0.05 1 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:12463441-12463714 + dsi_29391 CCAGGATACGGTGTCGTTCCGAGGAATGTGCTGAGGCAGCATCGAGATGCGTAAGTAGAAATC-ATTATGAAACATATGATTATTTCTATTGATCTTAGC----------------------------------------------------------------------------------------------------------------------------------------------------TA------------TACGATTTCGTAA--------TGATTTTGATTTCTT-------------------TATAAATTGTC-----------A------------------------G---CAG------------------ACTTCGTTTATCATATAA------TTTATTACCTTTTA--CAAATTTTG--AAATG----ATTATCACATATATTC---CATA--C-------------------------------------------TT------TT-T-TTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATA
droSec2 scaffold_0:4946450-4946754 + CCAGGATACGGTGTCGTTCCGAGGAATGTGCTGAGACAGCATCAAGATGCGTAAGTAGATATC-ATTATGAAACATATGATTATTTCTTTTGATCTTAGC----------------------------------------------------------------------------------------------------------------------------------------------------TA------------CACGATTTCGTAA--------TGATTTTGATTGCTT-------------------CATAAATTGTCTTTCAAAA----CAATAATACTATTAATAATGAA--G---CAG------------------ACTTTGTTTATCATATAA------TTTATTACCTTTTA--CAAATTTGG--AAATG----ATTATCACATATATTC---CATA--C-------------------------------------------TT-GT----T-TTTTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATA
dm3 chr3L:12761403-12761660 + CCAGGATACGGTGTCGTTCCGAGGAATGTGCTGAGGCAGCATCAAGATGCGTAAGTAGAAATC-AT----------------------------CTTAGC----------------------------AGAAATTAGTAGAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCTTTCAAT------AATAA-ACTATTATTGTTGAAGCG---CAG------------------ACTTTGTTTATCATATAA------TTTATTTACTTTTA--CAAATTTTG--AAATG----ATTATCACATATATTC---CATA--C-------------------------------------------TT-GTCTTTT-T-CTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATA
droEre2 scaffold_4784:12769003-12769282 + CGAGGATCCGGTGTCGTTCTGAGGAATGTGCCGAGGCAGCATCAAGATGCGTAAGTAAAACTC-ATTATAAAACATATAATTACTTCTTCTGATCTCAGC----------------------------------------------------------------------------------------------------------------------------------------------------TC------------TAAGATTTC-------------------GATTGCTTAATT-----------------------CTTTTTCAAGA-----AATAATTTTACTA-----------------------------------ATTTCGTTTATACGATAA-----ATTTATTTATGTTTA--CAAATTTTG--AAATG----ATTATCACATATATTC---CATA--C-------------------------------------------TT-GT-TTTT-T-TTTTTAGATAAACTACGCTAAGAGTGTCTTTGATGAACGTGAACATGCCGTTTTATA
droYak3 3L:12832529-12832818 + CGAGGATTCGGTGTCGTTCTGAGGAATGTGCCGAGGCAGCATCAAGATGCGTAAGTAAAAATC-TTTATT-------TAATAATTTCGTTTGATCTATG----------------------------------------------------------------------------------------------TATGC--------------------------------------------------TC------------TAAAATTTAAAAA--------TG---TTGTTTTCCCAATT-------------------AATCCG-------------CTATAATAATATTAATATTAAA--G---AAG------------------ACTTCGTTTATCATATAA------TTTATTTACTTTTA--TAAATTTTG--AAATG----ATTATCACATATATTC---CATA--C-------------------------------------------TT-GT----T-TTTTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATA
droEug1 scf7180000409466:4856835-4857123 + CGAGGATACGTTGTCGATCAGAGGAATGTGCTGAGGCTGCATCAAGATGCGTAAGTAAAACCT-AT-C-GAAAAA-----------------------------------------------------------------------ATT------A-------------------------TAATTTAGCACATATATAATATTTATTTTATTG----------------------------TTAAGCCTTTAAATTGAGTT------------C--------TGCTTTTGGCATTTTAACT----------------------CAAA-----------A------------------------T---TAA--T-T---------------TTAGTTTAGCATATAA-----CTTTATTTAGTTTTA--CAAATTTTG--AAATG----ATTATCACATATATTT---CATA--T-------------------------------------------TT-GT----T-T-CTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATA
droBia1 scf7180000302529:863250-863442 - CGCGGATACGATGTCGATCTGAGGAAGTTGCGGAGGCCGCATCAAGATGCGTAAGTAAAACCTCCTTATGATACATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCGTATAA-----CTTTATTTACT-TTA--CAAATTTTG--AAATG----ATTATCACATATATTA---CATA-----------------------------------------------------------CTTTCAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATA
droTak1 scf7180000415409:177124-177438 + CCAGGATACGTTGTAAATCTGAGGAATGCGCTGAGAATGCGTCACGATGCGTAAGTAAACCAT------GAAAAA-----------------------------------------------------------------------TGTATAGTG-GGGCCAAAGAA-ATCGCTTCCCGCTGAATT-------TATATCAAATTTATATTCATGTCCCTAAGAACTCCGCACGAATTCAGCGTTAAGC-------------------------------------------GCATTATAATT----------------------TATC-----------A------------------------T---TTA--T-T---------------TTAGTTTAGTTTA---GTTAAGTTTCTTTACTTTTA--CAAATTTTG--AAATG----ATTATCACATATATTT---CTTA--T-------------------------------------------TT-GT----T-T-CTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATA
droEle1 scf7180000491255:1148967-1149185 + CAAGGATACGCTGTCGATCTGAGGAATGTGCTGAGGCTGCATCGAGATGCGTAAGTGAATTAT---TAGGA------------------------------------------------------------------------------------------------G------------------------------------------------------AAAAC--------------------------------------------------------------------------------------------------GCC-----------A------------------------GCAACAGATAAT---------------TTAATTTTGCATATAA-----CTTTATTTACTTTTA--CAAATTTTG--AAATG----ATTATCACATATATTC---CATA--T-------------------------------------------TT-GT----T-T-CTTTCAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATA
droRho1 scf7180000779359:22071-22301 - CGAGGATACGGTGTCGATCTGAGGAATGTGCTGAGGCTGCATCAAGATGCGTAAGTGGATTCT----ATAA-----------------------------------------------------------------------------------------------AA------------------------------------------------------AAATTGAATTG---------TTTA--T-ATT---------TAAATTTTAAAAA--------T-----------------------------------------------------------------------------------------------------------GTAGTTTTGCATATAA-----CTTTATTTACTTTTA--TAAATTTTG--AAATG----ATTATCACATATATTC---CATA--T-------------------------------------------TT-GT----T-T-CTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATACCATTTTATA
droFic1 scf7180000453839:254295-254629 - CGAGGATCCGATGTCGGTCTGAGGAATGTGCCGAGGCTGCATCAAGATGCGTAAGTAGACCCT--TTATTAAATATA------------------------------------------------------------------------------A-------------------------TACTTATGTACATATGCTTCGTT-AATTTACTG----------------------------TTT-------------------------AAATAGGCTTCGCTG---TTTTTTTGCCAATGCATTCTTATCAGCTTCTTAGATTTTTCTTCC---TTT-TTAAAATCACATTCGCTTTAAA--A---AAGATATT----------------TCCATTTGCATACAA-----CTTTATTCACTTTTA--CAAATTTTG--AAATG----ATTATCACATAAATTC---CATATAT-------------------------------------------TT-TA----T-T-CTTTTAGATAAACTACGCAAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATA
droKik1 scf7180000302272:401967-402100 + TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTATAGCATAAGTTACTTTTATTTACGTTTA--CAATTTGCGACAAACA----ACTATCACATATATT----CATA--T--------------------------------------------T-GT----T-T-CTTTTAGATAAACTACGCAAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATA
droAna3 scaffold_13337:19825512-19825750 - CCAGGATACGGTGTCGCTCTGAAGAGTGTGCGGAGGCGGCATCGAGATGTGTGAGTACAATTT---TATAA---------GAAT----T-----------TCATTTATAATCCGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------CA--------CG---T------------------------------------------------------------------------------------AGTTGCATTGAAACAATTTAT-----GTTTATAA-----CTTTATT----TTTATACAAAC-TTG--AAATG----ACTATCACATACATTTATTTTTA--T-------------------------------------------TT-GA--T-TTC-TTTTTAGATAAATTACGCTAAAAGTGTCTATGATGAACGTGAACATGCCGTTTTATA
droBip1 scf7180000396360:1016751-1016989 - CCAGGATACGGTGTCGGTCTGAGGAATGTGCCGAGGCGGCGTCGAGATGTGTAAGTTT------------------------------T-----------TAGTTTATGGTCTGAAGGACTAGTTTCCTTAAAATATTTTAAACTAC---------AATC-GA-----------------------------------------------------------------------------------------------------------------------------T------------------------------------------------------------------------------------AGTTGCATTGGAAC----------------------------AGTTTATTTTTATA-AAAACTTG--AAACG----ACTATCACATATATTT---AACT--T-------------------------------------------TT-GT----T-TCTTTTTAGATAAATTACGCTAAGAGTGTCTATGATGAACGTGAACATGCCGTTTTATA
dp5 XR_group6:3550915-3551094 + CAAGGATACGATGTCGATCGGAGGAATGTGCTGAAGCTGCATCCAGATGCGTAAGTGAATGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGATAATTTAATA-----------------------------------------------------------------------------------------------------------------------------CA-AAAATATG--AAACAATTTACTAACACACATCATG---CATA--T-------------------------------------------TT------TT-T-CTTTCAGATAAACTACGCAAAGAGTGTGTTTCACGAACATGAACATGCCGTCTTGTA
droPer2 scaffold_9:1848419-1848598 + CAAGGATACGATGTCGATCGGAGGAATGTGCTGAAGCTGCATCCAGATGCGTAAGTGAATGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGATAATTTAATA-----------------------------------------------------------------------------------------------------------------------------CA-AAAATATG--AAACAATTTATTAACACACAACATG---CATA--T-------------------------------------------TT------TT-T-CTTTCAGATAAACTACGCAAAGAGTGTGTTTCACGAACATGAACATGCCGTCTTGTA
droWil2 scf2_1100000004540:899157-899323 - CGCGGATAAGATGTCGAACTGAGGAATGTGCTGAAGCTGCATCTAGATGTGTAAGTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAAAAATA----CTTTTCA--------------------------ATTGCTAGAAATTCTT--TTATATC-------GTTTTTC-T-ATAC-T-CTTTCAGATAAACTACGCTAAAAGTGTATTCGATGAACGTGAACACACTGTTTTGTA
droVir3 scaffold_13049:19060134-19060390 - dvi_20596 CGCGAATTCGTTGTCGAACAGAGGAGTGTGCTGAGGCCGCATCCAGATGTGTAAGTAAAATCC-CA--------------------------------------------------------ACCTTTTAAAATCACCATAAACTATATATAA-G-AAAC-CATAGAG------------------------------------------------------AAATCGGATTG-------------------------AAAC------------C--------TGGGTCTG-------------------------------------------------------------------------------G------------------TCTTTGTGACTGTTTT---------------------------------------------------CATATATTA---CACT--CAAGAAGTATTGCTTAAAAATGAATAGAATAATTATTTGAGT--CTGTTGCTCT-C-GTTTCAGATTAATTATGCTAAAAGTGTCTTCGATGAACGCGA---------------
droMoj3 scaffold_6680:12179743-12179880 + CACGAATTCGTTGTCGAACAGAGGAATGTGCTGAGGCTGTGTCTAGATGTGTAAGTAGAGTGCTTATAAGAAAC---------------------------------------------------------------------------------------AAGACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTG----CCT------------------------------ATTGCTTATATATCTATATTATAAC-------GACTATG-T-CTTT-C-CTTACAGATT-----------------------------------------------
droGri2 scaffold_15110:16745440-16745641 - CGCAAATTCGGTGTCGGACTGAGGAATGTGCTGAGGCTGTGTCTAGATGTGTAAGTAAACCGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG---------TTAA--CTATTTATTATGTT------------T--------TAC--------------------------------------------------------------------------------------------------------------TTGCTGCATAA-----CTTCA------------TTAATATTG--ATATA-TATATGAATATATATATC----T-------------------------------------------------CT-GT-TTTT-C-TCTGCAGATAAACTACGCTAAAAGTGTCTTCGATGAACGTGAGC-TGTCGT-TAATA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCAGGATACGGTGTCGTTCCGAGGAATGTGCTGAGGCAGCATCGAGATGCGTAAGTAGAAATC-ATTATGAAACATATGATTATTTCTATTGATCTTAGC----------------------------------------------------------------------------------------------------------------------------------------------------TA------------TACGATTTCGTAA--------TGATTTTGATTTCTT-------------------TATAAATTGTC-----------A------------------------G---CAG------------------ACTTCGTTTATCATATAA------TTTATTACCTTTTA--CAAATTTTG--AAATG----ATTATCACATATATTC---CATA--C-------------------------------------------TT------TT-T-TTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................A------------------------G---CAG------------------ACTTCGTTTATCATAT.......................................................................................................................................................................................2112.00200000200000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATGAACGTGAACATGCC........2112.00220000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTCTTTGATGAACGTGAACATG..........2512.00200000001100000000
...............................TGAGGCAGCATCGAGATGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTTGATGAACGTGAACAT...........2111.00100000000001000000
......TACGGTGTCGTTCCGAGGAATGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGATGAACGTGAACATGC.........2211.00100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTTA--CAAATTTTG--AA..................................................................................................................................................15120.08100000000100000000
.........................................................................................................................................................................................................................................................................................................T-------------------TATAAATTGTC-----------A------------------------G---CT..........................................................................................................................................................................................................................16200.05100000001000000000
.............................................................................................................................................................................................................................................................................................................................TATAAATTGTC-----------A------------------------G---CT..........................................................................................................................................................................................................................15200.05100000000100000000
droSec2
CCAGGATACGGTGTCGTTCCGAGGAATGTGCTGAGACAGCATCAAGATGCGTAAGTAGATATC-ATTATGAAACATATGATTATTTCTTTTGATCTTAGC----------------------------------------------------------------------------------------------------------------------------------------------------TA------------CACGATTTCGTAA--------TGATTTTGATTGCTT-------------------CATAAATTGTCTTTCAAAA----CAATAATACTATTAATAATGAA--G---CAG------------------ACTTTGTTTATCATATAA------TTTATTACCTTTTA--CAAATTTGG--AAATG----ATTATCACATATATTC---CATA--C-------------------------------------------TT-GT----T-TTTTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATGAACGTGAACATGCC........2111.0010001
...............GTTCCGAGGAATGTGCTGAGACAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
......TACGGTGTCGTTCCGAGGAATGTGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGATGAACGTGAACATGC.........2211.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGAACGTGAACATGCC........2011.0010100
dm3
CCAGGATACGGTGTCGTTCCGAGGAATGTGCTGAGGCAGCATCAAGATGCGTAAGTAGAAATC-AT----------------------------CTTAGC----------------------------AGAAATTAGTAGAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCTTTCAAT------AATAA-ACTATTATTGTTGAAGCG---CAG------------------ACTTTGTTTATCATATAA------TTTATTTACTTTTA--CAAATTTTG--AAATG----ATTATCACATATATTC---CATA--C-------------------------------------------TT-GTCTTTT-T-CTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......TACGGTGTCGTTCCGAGGAATGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25131.00310000000000000000000000000000000000000000100300010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100030000000000000000000000000000000000000100000000000000000000000000300000000000000000000000000000000000100000000000000000000000000000001000000100030000120110000100100001111001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACGTGAACATGCCGTT.....21115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000020000211000000100000101103000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGAACGTGAACATGCCG.......2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000200000000000000000000000100000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGAACGTGAACATGCCGT......2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000200000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATGAACGTGAACATGCCGTT.....2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGATGAACGTGAACATGC.........2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000010000000000000000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATGAACGTGAACATGCC........2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAGTGTCTTTGATGAAC...................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACGTGAACATGCCGT......2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGCTAAAAGTGTCTTTGATGAACG..................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTTTGATGAACGTGAACAT...........2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGATGAACGTGAACATG..........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000000000000000000000000000
............GTCGTTCCGAGGAATGTGCTGAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GAATGTGCTGAGGCAGCATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
......TACGGTGTCGTTCCGAGGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GATACGGTGTCGTTCCGAGGAATGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACGTGAACATGCCGTTT....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGTCTTTGATGAACG..................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................GTTGAAGCG---CAG------------------ACTTTGTTT..............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CCGAGGAATGTGCTGAGGCAGCATCAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTCTTTGATGAACGTGAACATGCC........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................TTCCGAGGAATGTGCTGAGGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......TACGGTGTCGTTCCGAGGAATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGTTCCGAGGAATGTGCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAAGTAGAAATC-AT----------------------------CTTAGC----------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....ATACGGTGTCGTTCCGAGGAATGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................CCGAGGAATGTGCTGAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGATGAACGTGAACATG..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TCCGAGGAATGTGCTGAGGCAGCATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................TTCCGAGGAATGTGCTGAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGAACGTGAACATGCCGT......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAAAGTGTCTTTGATGAA....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..........................TGTGCTGAGGCAGCATCAAGATGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAGTGTCTTTGATGAACG..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGTCTTTGATGAACGTG................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GATACGGTGTCGTTCCGAGGAATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...........TGTCGTTCCGAGGAATGTGCTGAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..............................CTGAGGCAGCATCAAGATGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................ATCATATAA------TTTATTTACTT....................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AATGTGCTGAGGCAGCATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAAGTGTCTTTGATGAAC...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
......TACGGTGTCGTTCCGAGGAATGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......TACGGTGTCGTTCCGAGGAATGTGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCTAAAAGTGTCTTTGATG......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTTGATGAACGTGAACATGCCGTT.....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACTACGCTAAAAGTGTC.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
.........GGTGTCGTTCCGAGGAATGTGCTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTTTGATGAACGTGAACATGCCG.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATGAACGTGAACATGCCAA......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATGAACGTGAACATG..........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGATGAACGTGAACATGCCGTT.....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TCGTTCCGAGGAATGTGCTGAGGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GGTGTCGTTCCGAGGAATGTGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ATACGGTGTCGTTCCGAGGAATGTGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
droEre2
CGAGGATCCGGTGTCGTTCTGAGGAATGTGCCGAGGCAGCATCAAGATGCGTAAGTAAAACTC-ATTATAAAACATATAATTACTTCTTCTGATCTCAGC----------------------------------------------------------------------------------------------------------------------------------------------------TC------------TAAGATTTC-------------------GATTGCTTAATT-----------------------CTTTTTCAAGA-----AATAATTTTACTA-----------------------------------ATTTCGTTTATACGATAA-----ATTTATTTATGTTTA--CAAATTTTG--AAATG----ATTATCACATATATTC---CATA--C-------------------------------------------TT-GT-TTTT-T-TTTTTAGATAAACTACGCTAAGAGTGTCTTTGATGAACGTGAACATGCCGTTTTATASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACGTGAACATGCCGTT.....2111.0010000010
...............GTTCTGAGGAATGTGCCGAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGATGAACGTGAACATGCCGT......2411.0010000010
droYak3
CGAGGATTCGGTGTCGTTCTGAGGAATGTGCCGAGGCAGCATCAAGATGCGTAAGTAAAAATC-TTTATT-------TAATAATTTCGTTTGATCTATG----------------------------------------------------------------------------------------------TATGC--------------------------------------------------TC------------TAAAATTTAAAAA--------TG---TTGTTTTCCCAATT-------------------AATCCG-------------CTATAATAATATTAATATTAAA--G---AAG------------------ACTTCGTTTATCATATAA------TTTATTTACTTTTA--TAAATTTTG--AAATG----ATTATCACATATATTC---CATA--C-------------------------------------------TT-GT----T-TTTTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........TGTCGTTCTGAGGAATGTGCCGAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
droEug1
CGAGGATACGTTGTCGATCAGAGGAATGTGCTGAGGCTGCATCAAGATGCGTAAGTAAAACCT-AT-C-GAAAAA-----------------------------------------------------------------------ATT------A-------------------------TAATTTAGCACATATATAATATTTATTTTATTG----------------------------TTAAGCCTTTAAATTGAGTT------------C--------TGCTTTTGGCATTTTAACT----------------------CAAA-----------A------------------------T---TAA--T-T---------------TTAGTTTAGCATATAA-----CTTTATTTAGTTTTA--CAAATTTTG--AAATG----ATTATCACATATATTT---CATA--T-------------------------------------------TT-GT----T-T-CTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATASizeHit CountTotal NormTotal
No Reads
droBia1
CGCGGATACGATGTCGATCTGAGGAAGTTGCGGAGGCCGCATCAAGATGCGTAAGTAAAACCTCCTTATGATACATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCGTATAA-----CTTTATTTACT-TTA--CAAATTTTG--AAATG----ATTATCACATATATTA---CATA-----------------------------------------------------------CTTTCAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATASizeHit CountTotal NormTotal
No Reads
droTak1
CCAGGATACGTTGTAAATCTGAGGAATGCGCTGAGAATGCGTCACGATGCGTAAGTAAACCAT------GAAAAA-----------------------------------------------------------------------TGTATAGTG-GGGCCAAAGAA-ATCGCTTCCCGCTGAATT-------TATATCAAATTTATATTCATGTCCCTAAGAACTCCGCACGAATTCAGCGTTAAGC-------------------------------------------GCATTATAATT----------------------TATC-----------A------------------------T---TTA--T-T---------------TTAGTTTAGTTTA---GTTAAGTTTCTTTACTTTTA--CAAATTTTG--AAATG----ATTATCACATATATTT---CTTA--T-------------------------------------------TT-GT----T-T-CTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATASizeHit CountTotal NormTotal
No Reads
droEle1
CAAGGATACGCTGTCGATCTGAGGAATGTGCTGAGGCTGCATCGAGATGCGTAAGTGAATTAT---TAGGA------------------------------------------------------------------------------------------------G------------------------------------------------------AAAAC--------------------------------------------------------------------------------------------------GCC-----------A------------------------GCAACAGATAAT---------------TTAATTTTGCATATAA-----CTTTATTTACTTTTA--CAAATTTTG--AAATG----ATTATCACATATATTC---CATA--T-------------------------------------------TT-GT----T-T-CTTTCAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATASizeHit CountTotal NormTotal
No Reads
droRho1
CGAGGATACGGTGTCGATCTGAGGAATGTGCTGAGGCTGCATCAAGATGCGTAAGTGGATTCT----ATAA-----------------------------------------------------------------------------------------------AA------------------------------------------------------AAATTGAATTG---------TTTA--T-ATT---------TAAATTTTAAAAA--------T-----------------------------------------------------------------------------------------------------------GTAGTTTTGCATATAA-----CTTTATTTACTTTTA--TAAATTTTG--AAATG----ATTATCACATATATTC---CATA--T-------------------------------------------TT-GT----T-T-CTTTTAGATAAACTACGCTAAAAGTGTCTTTGATGAACGTGAACATACCATTTTATASizeHit CountTotal NormTotal
No Reads
droFic1
CGAGGATCCGATGTCGGTCTGAGGAATGTGCCGAGGCTGCATCAAGATGCGTAAGTAGACCCT--TTATTAAATATA------------------------------------------------------------------------------A-------------------------TACTTATGTACATATGCTTCGTT-AATTTACTG----------------------------TTT-------------------------AAATAGGCTTCGCTG---TTTTTTTGCCAATGCATTCTTATCAGCTTCTTAGATTTTTCTTCC---TTT-TTAAAATCACATTCGCTTTAAA--A---AAGATATT----------------TCCATTTGCATACAA-----CTTTATTCACTTTTA--CAAATTTTG--AAATG----ATTATCACATAAATTC---CATATAT-------------------------------------------TT-TA----T-T-CTTTTAGATAAACTACGCAAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATASizeHit CountTotal NormTotal
No Reads
droKik1
TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTATAGCATAAGTTACTTTTATTTACGTTTA--CAATTTGCGACAAACA----ACTATCACATATATT----CATA--T--------------------------------------------T-GT----T-T-CTTTTAGATAAACTACGCAAAAAGTGTCTTTGATGAACGTGAACATGCCGTTTTATASizeHit CountTotal NormTotal
No Reads
droAna3
CCAGGATACGGTGTCGCTCTGAAGAGTGTGCGGAGGCGGCATCGAGATGTGTGAGTACAATTT---TATAA---------GAAT----T-----------TCATTTATAATCCGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------CA--------CG---T------------------------------------------------------------------------------------AGTTGCATTGAAACAATTTAT-----GTTTATAA-----CTTTATT----TTTATACAAAC-TTG--AAATG----ACTATCACATACATTTATTTTTA--T-------------------------------------------TT-GA--T-TTC-TTTTTAGATAAATTACGCTAAAAGTGTCTATGATGAACGTGAACATGCCGTTTTATASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CCAGGATACGGTGTCGGTCTGAGGAATGTGCCGAGGCGGCGTCGAGATGTGTAAGTTT------------------------------T-----------TAGTTTATGGTCTGAAGGACTAGTTTCCTTAAAATATTTTAAACTAC---------AATC-GA-----------------------------------------------------------------------------------------------------------------------------T------------------------------------------------------------------------------------AGTTGCATTGGAAC----------------------------AGTTTATTTTTATA-AAAACTTG--AAACG----ACTATCACATATATTT---AACT--T-------------------------------------------TT-GT----T-TCTTTTTAGATAAATTACGCTAAGAGTGTCTATGATGAACGTGAACATGCCGTTTTATASizeHit CountTotal NormTotal
No Reads
dp5
CAAGGATACGATGTCGATCGGAGGAATGTGCTGAAGCTGCATCCAGATGCGTAAGTGAATGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGATAATTTAATA-----------------------------------------------------------------------------------------------------------------------------CA-AAAATATG--AAACAATTTACTAACACACATCATG---CATA--T-------------------------------------------TT------TT-T-CTTTCAGATAAACTACGCAAAGAGTGTGTTTCACGAACATGAACATGCCGTCTTGTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATAAACTACGCAAAGAGTG...............................2112.0020200000000
..................CGGAGGAATGTGCTGAAGCTGCAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACATGAACATGCCGTCTTG..2111.0010000001000
.........GATGTCGATCGGAGGAATGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..AGGATACGATGTCGATCGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
CAAGGATACGATGTCGATCGGAGGAATGTGCTGAAGCTGCATCCAGATGCGTAAGTGAATGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGATAATTTAATA-----------------------------------------------------------------------------------------------------------------------------CA-AAAATATG--AAACAATTTATTAACACACAACATG---CATA--T-------------------------------------------TT------TT-T-CTTTCAGATAAACTACGCAAAGAGTGTGTTTCACGAACATGAACATGCCGTCTTGTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACATGAACATGCCGTCTTG..2111.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAACATGAACATGCCGTCT....2011.001000010
droWil2
CGCGGATAAGATGTCGAACTGAGGAATGTGCTGAAGCTGCATCTAGATGTGTAAGTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAAAAATA----CTTTTCA--------------------------ATTGCTAGAAATTCTT--TTATATC-------GTTTTTC-T-ATAC-T-CTTTCAGATAAACTACGCTAAAAGTGTATTCGATGAACGTGAACACACTGTTTTGTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGATGAACGTGAACACACTGTT.....2512.00200020
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACGTGAACACACTGTTTTGT.2411.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACGTGAACACACTGTTT....2211.00101000
....GATAAGATGTCGAACTGAGGAATGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
......TAAGATGTCGAACTGAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
droVir3
CGCGAATTCGTTGTCGAACAGAGGAGTGTGCTGAGGCCGCATCCAGATGTGTAAGTAAAATCC-CA--------------------------------------------------------ACCTTTTAAAATCACCATAAACTATATATAA-G-AAAC-CATAGAG------------------------------------------------------AAATCGGATTG-------------------------AAAC------------C--------TGGGTCTG-------------------------------------------------------------------------------G------------------TCTTTGTGACTGTTTT---------------------------------------------------CATATATTA---CACT--CAAGAAGTATTGCTTAAAAATGAATAGAATAATTATTTGAGT--CTGTTGCTCT-C-GTTTCAGATTAATTATGCTAAAAGTGTCTTCGATGAACGCGA---------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......TCGTTGTCGAACAGAGGAGTGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24110.0010000020200000000000000003002100000000000000000000000000000000000
..........TTGTCGAACAGAGGAGTGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.006001001000000000000000000010000000000000000000000000000001000020
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTAAAAGTGTCTTCGATG......................2114.004001000000100000000000000000010000000000000000000000000000000010
...GAATTCGTTGTCGAACAGAGGAGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.003000010000000000000000000011000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAGTGTCTTCGATGAACG..................2113.003000000001000000000000001000000100000000000000000000000000000000
...........TGTCGAACAGAGGAGTGTGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003000000001000000000000000010000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGAGT--CTGTTGCTCT-C-GT.......................................................2112.002000000000000000000000000001100000000000000000000000000000000000
.........................GTGTGCTGAGGCCGCATCCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002001000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................ATAGAG------------------------------------------------------AAATCGGATTG-------------------------AAAC------------..........................................................................................................................................................................................................................................................................................................................2112.002100000000000000000000000000001000000000000000000000000000000000
...........TGTCGAACAGAGGAGTGTGCTGAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000000000000000000000000002000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTGTCTTCGATGAACGC.................2112.002000000000000000000000000010010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTATGCTAAAAGTGTCTTCGATGAA....................2812.002000000000000000000000000002000000000000000000000000000000000000
..........................TGTGCTGAGGCCGCATCCAGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000002
...........TGTCGAACAGAGGAGTGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000001010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................C------------C--------TGGGTCTG-------------------------------------------------------------------------------G------------------TCTTTGTGAC.............................................................................................................................................................................................2112.002200000000000000000000000000000000000000000000000000000000000000
..............................CTGAGGCCGCATCCAGATGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AATCGGATTG-------------------------AAAC------------C--------TGGGTC...........................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
...........TGTCGAACAGAGGAGTGTGCTGAGGCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAATAATTATTTGAGT--CTGT..................................................................2211.001000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................................................................................CGGATTG-------------------------AAAC------------C--------TGGGTCTG-------------------------------------------------------------------------------G------------------TT.....................................................................................................................................................................................................2311.001100000000000000000000000000000000000000000000000000000000000000
.............TCGAACAGAGGAGTGTGCTGAGGCCGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000010000000000000000000000000000000000000
......TTCGTTGTCGAACAGAGGAGTGTGCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
........CGTTGTCGAACAGAGGAGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATAATTATTTGAGT--CTGTT.................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATGCTAAAAGTGTCTTCG.........................2111.001000000000000000000000000000000100000000000000000000000000000000
................................................................................................................................................................................................................................ATCGGATTG-------------------------AAAC------------C--------TGGGTCT..........................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------CATATATTA---CACT--CAAGAAGTATTGC.....................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
...........TGTCGAACAGAGGAGTGTGCTGAGGCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGCTCT-C-GTTTCAGATT...............................................2011.001001000000000000000000000000000000000000000000000000000000000000
....AATTCGTTGTCGAACAGAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
......TTCGTTGTCGAACAGAGGAGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
..................CAGAGGAGTGTGCTGAGGCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...........TGTCGAACAGAGGAGTGTGCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000100000000000000000000000000000000000000000000000000000000
...........TGTCGAACAGAGGAGTGTGCTGAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
..............CGAACAGAGGAGTGTGCTGAGGCCGCATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000100000
................AACAGAGGAGTGTGCTGAGGCCGCAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000001000000000000000000000000000000000000000000000000000000
...........TGTCGAACAGAGGAGTGTGCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000100000000000000000000000000000000000000000000000000000
..................CAGAGGAGTGTGCTGAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGCTAAAAGTGTCTTCGA........................2111.001000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................ATATATAA-G-AAAC-CATAGAG------------------------------------------------------A.............................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTA---CACT--CAAGAAGTATT.......................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGACTGTTTT---------------------------------------------------CATATATTA---CAC.....................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
.........................GTGTGCTGAGGCCGCATCCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT-C-GTTTCAGATTAATTATG........................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................ACAGAGGAGTGTGCTGAGGCCGCATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
...................AGAGGAGTGTGCTGAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................GGTCTG-------------------------------------------------------------------------------G------------------TCTTTGTGACTG...........................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTAATTATGCTAAAAGTGT..............................2111.001000000000000000000000000000000000000000000000000000000000000010
........CGTTGTCGAACAGAGGAGTGTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
......TTCGTTGTCGAACAGAGGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..................CAGAGGAGTGTGCTGAGGCCGCAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTATTTGAGT--CTGTTGCT..............................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................TCGGATTG-------------------------AAAC------------C--------TGGGTCTG-------------------------------------------------------------------------------G------------------.......................................................................................................................................................................................................2211.001000000000100000000000000000000000000000000000000000000000000000
........................AGTGTGCTGAGGCCGCATCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTGCTTAAAAATGAATAG.......................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
...........TGTCGAACAGAGGAGTGTGCTGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000001000000000000000000000000000000000000000
.................ACAGAGGAGTGTGCTGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000100000000000000000000000000000000
.................................................TGTAAGTAAAATCC-CA--------------------------------------------------------ACCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA---CACT--CAAGAAGTATTGCTT...................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--CTGTTGCTCT-C-GTTTCAG..................................................2011.001000000000000000000000000000000010000000000000000000000000000000
................AACAGAGGAGTGTGCTGAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
............GTCGAACAGAGGAGTGTGCTGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................GAG------------------------------------------------------AAATCGGATTG-------------------------AAAC------------C--------TG...............................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................AGATGTGTAAGTAAAATCC-C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
.......TCGTTGTCGAACAGAGGAGTGTGCTGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATTATGCTAAAAGTGTCTTCGAT.......................2611.001000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................TTAAAATCACCATAAACTAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........GTTGTCGAACAGAGGAGTGTGCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000001000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGATTAATTATGCTAAA...................................2111.001000000000000000001000000000000000000000000000000000000000000000
.......TCGTTGTCGAACAGAGGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000100000000000000000000000000000000000000000000000000000000
......TTCGTTGTCGAACAGAGGAGTGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
...................AGAGGAGTGTGCTGAGGCCGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000010000000000000000000000000000000000000000000000000000
.......TCGTTGTCGAACAGAGGAGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000100000000000000000000000000000000000000000000000000000000
...................AGAGGAGTGTGCTGAGGCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...............................TGAGGCCGCATCCAGATGTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.....................AGGAGTGTGCTGAGGCCGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000001000000000000000000000000000000000000000000000000000000
...................AGAGGAGTGTGCTGAGGCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000010000000000000000000000000000000000000000000000000000000
.................ACAGAGGAGTGTGCTGAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................AACAGAGGAGTGTGCTGAGGCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000001000000000000000000000000000000000000
droMoj3
CACGAATTCGTTGTCGAACAGAGGAATGTGCTGAGGCTGTGTCTAGATGTGTAAGTAGAGTGCTTATAAGAAAC---------------------------------------------------------------------------------------AAGACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATTG----CCT------------------------------ATTGCTTATATATCTATATTATAAC-------GACTATG-T-CTTT-C-CTTACAGATT-----------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................GATGTGTAAGTAGAGTGCTTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.005100004
......................................................GTAGAGTGCTTATAAGAAAC---------------------------------------------------------------------------------------A..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.....................................TGTGTCTAGATGTGTAAGTAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..........................................CTAGATGTGTAAGTAGAGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100
..........TTGTCGAACAGAGGAATGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
........................AATGTGCTGAGGCTGTGTCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.................ACAGAGGAATGTGCTGAGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
........................AATGTGCTGAGGCTGTGTCTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100
droGri2
CGCAAATTCGGTGTCGGACTGAGGAATGTGCTGAGGCTGTGTCTAGATGTGTAAGTAAACCGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG---------TTAA--CTATTTATTATGTT------------T--------TAC--------------------------------------------------------------------------------------------------------------TTGCTGCATAA-----CTTCA------------TTAATATTG--ATATA-TATATGAATATATATATC----T-------------------------------------------------CT-GT-TTTT-C-TCTGCAGATAAACTACGCTAAAAGTGTCTTCGATGAACGTGAGC-TGTCGT-TAATASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 09:53 AM