dsi_29385

exon [2r_21356993_21357208_-]; CDS [2r_21356993_21357208_-]; intron [2r_21357209_21361511_-]

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## ACTTGATTGGGTGCAGTTCTTCCCTATGCATTTCAATTGGCAGCGAGAGAGCGGAGGCTGAGTGGTTTTTTTTTCTGGCGCTTGACTCATGCGGCGTCATTGCACTTGTTGTGTTTATCGCCTTCCCGCTGAGATGAAGAAGAGAAGCGTACGAAACAGAGATGGCAACCGTGAATAACTCTTTCTATTTTCTTTTACAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAAGT ************************************************((((..(((.....((((((.((((..((((((..((((.((((((.....((((.....))))....)))).....))))))...........))))))..)))).)))))))))..))))............................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553487 NRT_0-2 hours eggs	SRR553486 Makindu_3 day-old ovaries	M025 embryo	SRR553485 Chicharo_3 day-old ovaries	GSM343915 embryo	M053 female body	SRR553488 RT_0-2 hours eggs	SRR902009 testis
.................................................................................................................................TGTGATGAAGCAGAGAATCGT....................................................................................................	21	3	2	1.50	3	3	0	0	0	0	0	0	0
................................................................GTTTTCTTTTCTGGCGCT........................................................................................................................................................................	18	1	1	1.00	1	0	0	1	0	0	0	0	0
.......................................................................................................................................................................................................................AGGATTGAGCGGGAGCATG................	19	2	1	1.00	1	0	1	0	0	0	0	0	0
...............................................AGAGCGGAGTCTGTGTGGT........................................................................................................................................................................................	19	2	1	1.00	1	0	0	0	0	1	0	0	0
.........................................................................................................................................................................................TATTTTCTTTTACAGGGCTTCGTGGC.......................................	26	0	1	1.00	1	0	0	0	1	0	0	0	0
...............................................................................................GTCAATGCACCTGTGGTGTT.......................................................................................................................................	20	3	5	0.60	3	2	0	0	0	0	0	1	0
..................................................................................................................................................................................................AACCAGGGCTTCGTGGCCGCCA..................................	22	3	2	0.50	1	0	0	0	0	0	1	0	0
...................................................CGGAGGCGGAGGGGTTTTT....................................................................................................................................................................................	19	2	12	0.17	2	0	0	0	0	0	0	0	2
....................................................................................................................................................................................................................GCTTGTATTAAGCGGGA.....................	17	2	6	0.17	1	1	0	0	0	0	0	0	0
....................................................................................................................................................GTACGCAACAGAGAAGG.....................................................................................	17	2	16	0.06	1	0	1	0	0	0	0	0	0

TGAACTAACCCACGTCAAGAAGGGATACGTAAAGTTAACCGTCGCTCTCTCGCCTCCGACTCACCAAAAAAAAAGACCGCGAACTGAGTACGCCGCAGTAACGTGAACAACACAAATAGCGGAAGGGCGACTCTACTTCTTCTCTTCGCATGCTTTGTCTCTACCGTTGGCACTTATTGAGAAAGATAAAAGAAAATGTCCCGAAGCACCGGCGGTCATAATTCGCCCTCGTACCGCTGCTCCAGCTTCA ************************************************((((..(((.....((((((.((((..((((((..((((.((((((.....((((.....))))....)))).....))))))...........))))))..)))).)))))))))..))))............................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553488 RT_0-2 hours eggs	O002 Head	SRR553485 Chicharo_3 day-old ovaries	SRR553486 Makindu_3 day-old ovaries	SRR618934 dsim w501 ovaries	SRR553487 NRT_0-2 hours eggs
.........................................................................................................................GAAGGGCGAATCTAC..................................................................................................................	15	1	5	1.80	9	5	0	0	2	0	2
............................................................................................................................................................................................................AGCTCCGGCAGTCATA..............................	16	2	20	1.30	26	26	0	0	0	0	0
....................................................................................................ACGTGAACAACACAAATA....................................................................................................................................	18	0	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................AGCTCCGGCAGTCAT...............................	15	2	20	0.50	10	10	0	0	0	0	0
..................................................................AAAAAAAAGGCCGCGAAC......................................................................................................................................................................	18	1	2	0.50	1	0	0	1	0	0	0
..................................................................................................................................................................................................................................CCTCGGACCGCTGCTC........	16	1	2	0.50	1	0	0	0	0	1	0
............................................................................................................................................................................................................AGCTCTGGCGGTCATA..............................	16	2	19	0.05	1	0	0	0	0	0	1
............................................................................................................................................................................................AAAGCAGATGTCCCGA..............................................	16	2	20	0.05	1	0	0	1	0	0	0
...............................................................................AGAAGTGAGTACGCCG...........................................................................................................................................................	16	2	20	0.05	1	0	0	0	1	0	0
................................................................................................................................................................................TTGAGAAAGAAAAAAG..........................................................	16	1	20	0.05	1	0	0	0	1	0	0

Species	Coordinate	ID	Alignment
droSim2	2r:21357159-21357408 -	dsi_29385	ACTTGATTGGGTGCAGTTCTT------------CCCTATGCATTTCAATTGGCAGCGAG--AGAG-----------------------------------CGGAGGCTGAGTG-----GTTTTTTTTTCTGGCGCTTGACTCATGCGGCGT-------------------------------------------------------CATTGCAC--------------------------------------------TTGTTGTGTTT---ATCGC--CTTCCCGCTGAGATGAAG--------AAGAGAAG-CG----------------------------------------------------------------------------------------------------------------------------TACGA---------AACAGAGATG--------GCA-------------------ACCGTGA-A----------------T-------------AACTCTT-----------------TCT----------ATTTT-CTTTTACAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAAGT
droSec2	scaffold_23:750796-751043 -		ACTTGATTGGGTGCAGTTCTT------------CCCTATGCATTTCAATTGGCAGCGAG--AGAG-----------------------------------CGGAGGCTGAGTG-----GATT-T-TTTCTGGCGCTTGACTCATGCGGCGT-------------------------------------------------------CATTGCAC--------------------------------------------TTGTTGTGTTT---ATCGC--CTTCCCGCTGAGATGAAG--------AAGAGATA-CG----------------------------------------------------------------------------------------------------------------------------TACGA---------AACAGAGATG--------GCA-------------------ACCGTGA-A----------------T-------------AACTCTT-----------------TCA----------ATTTT-CTTTTACAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAAGT
dm3	chr2R:20893557-20893835 -		A----------TGCA-TTCTT------------CTCTATGCATTTCAATTGGCAGCGAG--AGAG-----------------------------------CGGAGGCTGAGTG-----GTTT-TTCTTCTGGCGCTTGACTCATGCGGCGT-------------------------------------------------------CATTGCAC--------------------------------------------TTGTTGTGTTT---ATCGC--CTTCCCGCTGAGATGAAG--------AACAGAA-------------GCGTACCCGT--CCTGT-TTTCGCGTAACACA-----------------------------------------------------CTCA-TACC--------------ACACTGCAGAGA---------AACAGAGATG--------GCA-------------------ACCGTGA-A----------------T-------------AACTCTT-----------------TCT----------ATTTT-CTTTTACAGGGCTTCGTGGCCGCCAGTATTAAACGGGAGCATGGCGACGAGGTCGAAGT
droEre2	scaffold_4845:22268691-22268957 -		ACTTGATTGGGTGCAGTTCTT------------CCCCATGCATTTCACTTGGCAGCGAG--AGCG-----------------------------------CGGAGGCTGAGTG-----GTTT-TTCTTCTGGCGCTTGACTCATGCGGCGT-------------------------------------------------------CATTGCAC--------------------------------------------TTGTTGTGTTT---TTCGC--CTTCCCGCTGAGTTGAAG--------AACAGAA-------------ACAAACGCGC--CCTGTA-TTCGCATAACACA-----------------------------------------------------CCCG-TGCC--------------A----------------------------------------C-------------------ACCGTGA-A----------------T-------------AACTCTT-----------------TCT----------ATTTT-CTTTTACAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAAGT
droYak3	2R:20858285-20858579 -		ACTTGATTGGGTGCAGCTCGT------------TCCTATGCATTTCACTTGGCAGCGAG--AGAG-----------------------------------CGGAGGCTGAGTG-----GTTT-TTCTTCTGGCGCTTGACTCATGCGGCGT-------------------------------------------------------CATTGCAC--------------------------------------------TTGTTGTGTTT---ATCGC--CTTCCCGCTGAGATGAAG--------AACAGAA-------------ACATACGCGCGCCCCGT-TTTCGCATAACACA-----------------------------------------------------GCCA-TACC----------AACCACACCG-TAGGA---------AACAGAGATT--------GCA-------------------ACCGTGA-A----------------T-------------AACTCTT-----------------TCT----------ATTTT-CTTTTACAGGGCTTCGTGGCAGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAAGT
droEug1	scf7180000409464:1427745-1428026 +		ACTTGAATGGGTGCAGTTTTT------------CCCTATGCATTTCTCTTGCCAGCCAG--AGAG-----------------------------------CAGAGCCTAAGTG-----GCTC-ATCTTCTGGCGCTTGACTCATGCAGCGT-------------------------------------------------------TGTTGCAC--------------------------------------------TTGTTGTGTTT---ATCGC--CTACCCGCTGAGATAAAA--------AAA---A-------------ACATACATAC--TTTTTGTTTTGCATAACAAC-----------------------------------------------------CCCT-TTCCTG---------------------TGG---------ATCAAAGATT--------GCA-------------------ACCGTGA-A----------------T-------------AACCCAT-----------------CAT-----T----TTTTA-TTTTTACAGGGCTTTGTGGCCGCCAGTATTAAGCGAGAGCATGGCGACGAGGTCGAAGT
droBia1	scf7180000301754:5867375-5867672 -		ACTTGAACGGGTGCAGTTCTT------------CCCTATGCATTTCACTCGCCAGCGAG--AGAG-----------------------------------CGGAGGCTGAGTG-----GCTC-TTCTTGTGGCGCTTGACTCATGCAGCGT-------------------------------------------------------CGCCGCAC--------------------------------------------TTGTTGTGTTT---ATCGG--CTACCCGCTGAGATGTAA--------AGCGAAA------------GACACACACAG--TCTGCGTTTTGCATAAGGTT-----------------------------------------------------CCCC-TTCCCGA---GC--AAAGACA-CGCTAGAA---------AACAAAGATT--------GCA-------------------GCTCTGA-G----------------T-------------AACCCAT-----------------TCT----------AT--C-TCTTTTCAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAGGT
droTak1	scf7180000415805:316969-317289 +		ACTTGAATGGGTGCAGTTCTT------------CCCTATGCGTTTCACTTGCCAGCGAGAGAGAG-----------------------------------CGGAGGCTGAGTG-----GCTC-TTCTTCTGGCGCTTGACTCATGCAGCGT-------------------------------------------------------CGTTGCAC--------------------------------------------TTGTTGTGTTT---ATCGC--CTACCCGCTGAGATGAAA--------AACAAAA--CGTGCACTCGCACACACACAT--TCTGTATTTTGCATAAGGTC-----------------------------------------------------CCCCATTCCCCA---GC-------CACCGCTGGGA---------AACAGAGATTGTT-----GCC-------------------ACCGTGA-A----------------T-------------AGCCCAT-----------------TCTAACATTCTGTC-TTC-CTTTTCCAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAAGT
droEle1	scf7180000491107:288812-289116 +		ACTTGAATTGGTGCAGTTTTT------------CCCTACACATTTCACTTGCCAGCGAA--AGGG-----------------------------------CGGAGACTGAGTG-----ACTC-TTCTTCTGGCGCTTGACTCATGCAGCGT-------------------------------------------------------TGTTGCAC--------------------------------------------TTGTTATGTTT---ATCGC--CTACCCGCTGAGTTAAAA--------AAAAGAAAAC--------ACACACACACAA--TCTGCATTTTGCATAACTTA-----------------------------------------------------TCCC-ATCCTG-------------TACCACTTAAAGCATACTTTTACAAATATT--------GCA-------------------TCCGTAA-C----------------T-------------AACCCAT-----------------TCT----------TCCT--TCTTTACAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAGGT
droRho1	scf7180000778233:33167-33461 -		ACTTGAATGGGTGCAGTTTTT-------------CATAGGCATTTCACTTGCCAGCGAG--AGAG-----------------------------------CGGAGACTGAGTG-----GCTC-TTCTTCTGGCGCTTGACTCATGCAGCGT-------------------------------------------------------TGTTGCAC--------------------------------------------TTGTTGTGTTT---ATCGC--CTACCCGCTGAGATGGGA--------AA------------------ACACACACAA--TCTCCCTTTTGCATACCGTACCCCG------------------------------------------------------TCCCCA---TC--C--CCCACTGCTAAGA---------AACAAAAATT--------GCA-------------------TCCGTAT-C----------------T-------------AACCCAT-----------------TCA----TTCT--ACCT--TCTTTACAGGGTTTCGTGGCCGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAGGT
droFic1	scf7180000453858:599463-599756 +		ACTTGAATG-TTGCAGTT-TT------------CCCTCGGCATTTCACTTGCCAGCGAG--AGAG-----------------------------------CGGAGGCTGAGAG-----GCTC-TTCTTCTGGCGCTTGGCTCATGCAGCGC-------------------------------------------------------GGCTGCAC--------------------------------------------TTGTTGTGCTT---ATCGC--CTACCCGCTGAGATAGAA--------AA-------------------CACAGACAA--TCTGTGTTTTGCATAACGAC-CCCT-----------------------------------TCCCCTTCCACTTTCCC-TTCCCG-------------AACCGCTAAGA---------A----TGAAT--------GC--------------------ACCGTAA-C----------------T-------------AATCCAC-----------------TCT------------TTT-TCCTTACAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAGGT
droKik1	scf7180000302366:1041693-1042034 -		ACTTGACTTGGCGCAGTTGTG---------------------------GTGCCCTC-GGAGAGCG-----------------------------------T-GAGGCTGAGTG-----GCTC-TTCTTCTGGCGCTTGTCTCATGCAGCGCATG-------CAACGGGAACAGAATCGGAATCTGAATCTGAAACTC------TGGTGTTGCAC--------------------------------------------TTGTTGTGTTT---ATCGC--CTACCCGCTGAGCTGAAC--------AAATGGC-------------ACACAGGCGA--ACTGTTT-------ATCTAC-CTCT------------------------------------------------CCCT-CTCCAGA---CC--CCAACCC-C-----GG---------ATCCCAGATCCCA-----GCG-------------------AATGTGA-A----------------T-----ATACAACTAACCAATTCCTTTTTGTTT---TCTCT----------ACTT--TCTTTGCAGGGCTTCGTGGCTGCCAGCATTAAGCGGGAGCATGGCGACGAGGTCGAGGT
droAna3	scaffold_13266:12186228-12186475 -		ACTTGAACGGGTGCCTCT-GT------------CCCCAC---------------GCGAG--AGTG-----------------------------------CG-ACGCGGAGA------GCCC-TTGTGCCGGCGCTTGACTCATGCAGCGCGG----------------G-------------------------TCTG--------TGTGCAC--------------------------------------------TTGGTGTGTTT---ATCGC--CTTCCCGCCGAGATGTA--------------------------------------T--CT--TGTTTTGCAG------------------------------------------------------------------------------------------------------------------------------------------------CTCTGTTCCAACCTCCTTTGTAGACAACCC----CACTAACTACT----------------CTCT----------TCCTTCCCATTTCAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAGGT
droBip1	scf7180000396547:294547-294796 +		TT-------------------------------ACCCACACTCT-----T------GAG--AGA------------------------------------------------------GCTC-TTGTTCTGGCGCTTGACTCATGCAGCGTGTGGCATCCACAACGGCC--------------------------TCAGTGGATGCTGCTGCAC--------------------------------------------TTGTTGTGTTTATCATCGC--CTACCCGCTGAGAT--------------------------------------------TCTGTGTTTTGTATTT----------------------------------------------------------T-------------------------------------------ATTTTGCTA--------GCA-------------------ACCCCT------------------------------ACTAACTAAACTCTATATCTTTCTCTTTCT----------ATC-T-CATTCACAGGGCTTTGTGGCAGCCAGTATTAAGCGGGAGCATGGCGATGAGGTCGAGGT
dp5	3:2012114-2012562 -		ACTCGAACGGGTGCAGTTTTTGTTGCTGTCATTGCTTCTGC------TTTGTGAGAGAT--AGAGATACAATGAGTGGGAGTGGGAGAGGGAGAGGGACATGGAGAGTGAGTGAAACAGCTC-TTATGTTGGCGCTTGACTCATGCAGCGCTGC-------CAACGCGAG-------------------------ACGA--------GATGCACTCGAAGACAGCAGAAGCAGGAGCAGCAGAATTTACGCTCCATTGTTGTTTCTTTT---ATCGTGGCTACCCGCTGAGATAAAGCAGTGCACAC--------------------------A-----------TTGCATACATTAACTCATACATACTCATTCACTCATAAGCAAAATAACATTTTGATTCTCATATTTTCC-TTCCTG-GAAGCCG-----AA--------------------------TTGTTAAAGTTCAAGTGTGACTAATTGAATGGAC----A-T----------------T-------------TTT--CT-----------------TGT----------CTCCT-TTTTTGCAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAACATGGCGACGAGGTTGAGGT
droPer2	scaffold_2:2184462-2184916 -		ACTCGAACGGGTGCAGTTTTTGTTGCTGTCATTGCTTCTGCTTTTCACTTGTGAGAGAT--AGAGATACAGTGAGTGGGAGTGGGAGAGGGAGAGGGACATGGAGAGTGAGTGAAACAGCTC-TTATGTTGGCGCTTGACTCATGCAGCGCTGC-------CAACGCGAG-------------------------ACGA--------GATGCACTCGAAGACAGCAGAAGCAGGAGCAGCAGAATTTACGCTCCATTGTTGTTTCTTTT---ATCGTGGCTACCCGCTGAGATAAAGCAGTGCACAC--------------------------A-----------TTGCATACATTAACTCATACATACTCATTCACTCATAAGCAAAATAACATTTTGATTCTCATATATTCC-TTCCTG-GAAGCCG-----AA--------------------------TTGTTAAAGTTCAAGTGTGACTAATTGAATGGAC----A-T----------------T-------------TTT--CT-----------------TGT----------CTCCT-TTTTTGCAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAACATGGCGACGAGGTTGAGGT
droWil2	scf2_1100000004510:1928439-1928509 -		TTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-----------------TCT----------GTTTT-TTTTTTCAGGGTTTCGTTGCCGCCAGTATTAAGCGTGAACATGGCGATGAGGTCGAAGT
droVir3	scaffold_12875:17141558-17141626 +		T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------TGT----------CTTCA-TTTTTGCAGGGCTTCGTTGCCGCCAGTATTAAGCGCGAACATGGCGACGAGGTGGAGGT
droMoj3	scaffold_6496:10861085-10861158 -		TCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------CGT-----T---TC-TTA-TTTTTGCAGGGCTTCGTTGCCGCCAGTATTAAGCGCGAACATGGCGACGAGGTGGAGGT
droGri2	scaffold_15245:16670097-16670171 +		CTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGTTG---A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-CTTTTGCAGGGCTTCGTTGCCGCCAGTATTAAGCGCGAACATGGCGACGAGGTGGAGGT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

ACTTGATTGGGTGCAGTTCTT------------CCCTATGCATTTCAATTGGCAGCGAG--AGAG-----------------------------------CGGAGGCTGAGTG-----GTTTTTTTTTCTGGCGCTTGACTCATGCGGCGT-------------------------------------------------------CATTGCAC--------------------------------------------TTGTTGTGTTT---ATCGC--CTTCCCGCTGAGATGAAG--------AAGAGAAG-CG----------------------------------------------------------------------------------------------------------------------------TACGA---------AACAGAGATG--------GCA-------------------ACCGTGA-A----------------T-------------AACTCTT-----------------TCT----------ATTTT-CTTTTACAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAAGT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------ATTTT-CTTTTACAGGGCTTCGTGGC.......................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0

droSec2

ACTTGATTGGGTGCAGTTCTT------------CCCTATGCATTTCAATTGGCAGCGAG--AGAG-----------------------------------CGGAGGCTGAGTG-----GATT-T-TTTCTGGCGCTTGACTCATGCGGCGT-------------------------------------------------------CATTGCAC--------------------------------------------TTGTTGTGTTT---ATCGC--CTTCCCGCTGAGATGAAG--------AAGAGATA-CG----------------------------------------------------------------------------------------------------------------------------TACGA---------AACAGAGATG--------GCA-------------------ACCGTGA-A----------------T-------------AACTCTT-----------------TCA----------ATTTT-CTTTTACAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAAGT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAAGCGGGAGCATGGC..............	20	1	3.00	3	0	0	3	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGTATTAAGCGGGAGCATGG...............	23	1	1.00	1	0	1	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAAGCGGGAGCATGGCG.............	21	1	1.00	1	0	0	1	0

dm3

A----------TGCA-TTCTT------------CTCTATGCATTTCAATTGGCAGCGAG--AGAG-----------------------------------CGGAGGCTGAGTG-----GTTT-TTCTTCTGGCGCTTGACTCATGCGGCGT-------------------------------------------------------CATTGCAC--------------------------------------------TTGTTGTGTTT---ATCGC--CTTCCCGCTGAGATGAAG--------AACAGAA-------------GCGTACCCGT--CCTGT-TTTCGCGTAACACA-----------------------------------------------------CTCA-TACC--------------ACACTGCAGAGA---------AACAGAGATG--------GCA-------------------ACCGTGA-A----------------T-------------AACTCTT-----------------TCT----------ATTTT-CTTTTACAGGGCTTCGTGGCCGCCAGTATTAAACGGGAGCATGGCGACGAGGTCGAAGT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
................................................................................................................................................................................................................................................................................................GAGATGAAG--------AACAGAA-------------GCGTA.................................................................................................................................................................................................................................................................................................................	21	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGA-A----------------T-------------AACTCTT-----------------TCT----------ATTTT-CT.........................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGCATGGCGACGAGGT......	19	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCTTCGTGGCCGCCAGTATT.............................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATTAAACGGGAGCATGGC..............	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................GCTTGACTCATGCGGCGT-------------------------------------------------------CATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCATGGCGACGAGGT......	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGGGAGCATGGCGACGAGGTC.....	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAAACGGGAGCATGGC..............	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGA---------AACAGAGATG--------G..................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATTAAACGGGAGCATGGCGAC...........	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGGGAGCATGGCGACGAGG.......	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................CCGCTGAGATGAAG--------AACAGAA-------------G.....................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................GAGATGAAG--------AACAGAA-------------GCGTACCCG.............................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................GAG--AGAG-----------------------------------CGGAGGCTGAGTG-----.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGAGA---------AACAGAGATG--------GC.................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGGAGCATGGCGACGAG........	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCATGGCGACGAGGTCGAAG.	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTAAACGGGAGCATGGCGACGAGG.......	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0

droEre2

ACTTGATTGGGTGCAGTTCTT------------CCCCATGCATTTCACTTGGCAGCGAG--AGCG-----------------------------------CGGAGGCTGAGTG-----GTTT-TTCTTCTGGCGCTTGACTCATGCGGCGT-------------------------------------------------------CATTGCAC--------------------------------------------TTGTTGTGTTT---TTCGC--CTTCCCGCTGAGTTGAAG--------AACAGAA-------------ACAAACGCGC--CCTGTA-TTCGCATAACACA-----------------------------------------------------CCCG-TGCC--------------A----------------------------------------C-------------------ACCGTGA-A----------------T-------------AACTCTT-----------------TCT----------ATTTT-CTTTTACAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAAGT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAAGCGGGAGCATGGC..............	20	1	2.00	2	0	0	0	0	2	0	0
......................................................................................................................GTTT-TTCTTCTGGCGCTTGACTCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTATTAAGCGGGAGCAT.................	19	1	1.00	1	0	0	0	0	1	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGGGAGCATGGCGACG..........	19	1	1.00	1	1	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGTATTAAGCGGGAGC...................	19	1	1.00	1	0	0	0	0	1	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAGTATTAAGCGGGAGCATGGC..............	25	1	1.00	1	0	0	0	1	0	0	0

droYak3

ACTTGATTGGGTGCAGCTCGT------------TCCTATGCATTTCACTTGGCAGCGAG--AGAG-----------------------------------CGGAGGCTGAGTG-----GTTT-TTCTTCTGGCGCTTGACTCATGCGGCGT-------------------------------------------------------CATTGCAC--------------------------------------------TTGTTGTGTTT---ATCGC--CTTCCCGCTGAGATGAAG--------AACAGAA-------------ACATACGCGCGCCCCGT-TTTCGCATAACACA-----------------------------------------------------GCCA-TACC----------AACCACACCG-TAGGA---------AACAGAGATT--------GCA-------------------ACCGTGA-A----------------T-------------AACTCTT-----------------TCT----------ATTTT-CTTTTACAGGGCTTCGTGGCAGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAAGT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAAGCGGGAGCATGGC..............	20	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
..........................................................G--AGAG-----------------------------------CGGAGGCTGAGTG-----GTTT-TTCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGCATGGCGACGAGGT......	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................TTTCGCATAACACA-----------------------------------------------------GCCA-TACC----------AAC...........................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....................................................CAGCGAG--AGAG-----------------------------------CGGAGGCTGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAGTATTAAGCGGGAGCATGG...............	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCGACGAGGTCGAAGT	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................AGCGAG--AGAG-----------------------------------CGGAGGCTGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGGGCTTCGTGGCAGCCA..................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCATGGCGACGAGGTCGAA..	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

ACTTGAATGGGTGCAGTTTTT------------CCCTATGCATTTCTCTTGCCAGCCAG--AGAG-----------------------------------CAGAGCCTAAGTG-----GCTC-ATCTTCTGGCGCTTGACTCATGCAGCGT-------------------------------------------------------TGTTGCAC--------------------------------------------TTGTTGTGTTT---ATCGC--CTACCCGCTGAGATAAAA--------AAA---A-------------ACATACATAC--TTTTTGTTTTGCATAACAAC-----------------------------------------------------CCCT-TTCCTG---------------------TGG---------ATCAAAGATT--------GCA-------------------ACCGTGA-A----------------T-------------AACCCAT-----------------CAT-----T----TTTTA-TTTTTACAGGGCTTTGTGGCCGCCAGTATTAAGCGAGAGCATGGCGACGAGGTCGAAGT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

ACTTGAACGGGTGCAGTTCTT------------CCCTATGCATTTCACTCGCCAGCGAG--AGAG-----------------------------------CGGAGGCTGAGTG-----GCTC-TTCTTGTGGCGCTTGACTCATGCAGCGT-------------------------------------------------------CGCCGCAC--------------------------------------------TTGTTGTGTTT---ATCGG--CTACCCGCTGAGATGTAA--------AGCGAAA------------GACACACACAG--TCTGCGTTTTGCATAAGGTT-----------------------------------------------------CCCC-TTCCCGA---GC--AAAGACA-CGCTAGAA---------AACAAAGATT--------GCA-------------------GCTCTGA-G----------------T-------------AACCCAT-----------------TCT----------AT--C-TCTTTTCAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAGGT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

ACTTGAATGGGTGCAGTTCTT------------CCCTATGCGTTTCACTTGCCAGCGAGAGAGAG-----------------------------------CGGAGGCTGAGTG-----GCTC-TTCTTCTGGCGCTTGACTCATGCAGCGT-------------------------------------------------------CGTTGCAC--------------------------------------------TTGTTGTGTTT---ATCGC--CTACCCGCTGAGATGAAA--------AACAAAA--CGTGCACTCGCACACACACAT--TCTGTATTTTGCATAAGGTC-----------------------------------------------------CCCCATTCCCCA---GC-------CACCGCTGGGA---------AACAGAGATTGTT-----GCC-------------------ACCGTGA-A----------------T-------------AGCCCAT-----------------TCTAACATTCTGTC-TTC-CTTTTCCAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAAGT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

ACTTGAATTGGTGCAGTTTTT------------CCCTACACATTTCACTTGCCAGCGAA--AGGG-----------------------------------CGGAGACTGAGTG-----ACTC-TTCTTCTGGCGCTTGACTCATGCAGCGT-------------------------------------------------------TGTTGCAC--------------------------------------------TTGTTATGTTT---ATCGC--CTACCCGCTGAGTTAAAA--------AAAAGAAAAC--------ACACACACACAA--TCTGCATTTTGCATAACTTA-----------------------------------------------------TCCC-ATCCTG-------------TACCACTTAAAGCATACTTTTACAAATATT--------GCA-------------------TCCGTAA-C----------------T-------------AACCCAT-----------------TCT----------TCCT--TCTTTACAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAGGT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

ACTTGAATGGGTGCAGTTTTT-------------CATAGGCATTTCACTTGCCAGCGAG--AGAG-----------------------------------CGGAGACTGAGTG-----GCTC-TTCTTCTGGCGCTTGACTCATGCAGCGT-------------------------------------------------------TGTTGCAC--------------------------------------------TTGTTGTGTTT---ATCGC--CTACCCGCTGAGATGGGA--------AA------------------ACACACACAA--TCTCCCTTTTGCATACCGTACCCCG------------------------------------------------------TCCCCA---TC--C--CCCACTGCTAAGA---------AACAAAAATT--------GCA-------------------TCCGTAT-C----------------T-------------AACCCAT-----------------TCA----TTCT--ACCT--TCTTTACAGGGTTTCGTGGCCGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAGGT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

ACTTGAATG-TTGCAGTT-TT------------CCCTCGGCATTTCACTTGCCAGCGAG--AGAG-----------------------------------CGGAGGCTGAGAG-----GCTC-TTCTTCTGGCGCTTGGCTCATGCAGCGC-------------------------------------------------------GGCTGCAC--------------------------------------------TTGTTGTGCTT---ATCGC--CTACCCGCTGAGATAGAA--------AA-------------------CACAGACAA--TCTGTGTTTTGCATAACGAC-CCCT-----------------------------------TCCCCTTCCACTTTCCC-TTCCCG-------------AACCGCTAAGA---------A----TGAAT--------GC--------------------ACCGTAA-C----------------T-------------AATCCAC-----------------TCT------------TTT-TCCTTACAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAGGT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

ACTTGACTTGGCGCAGTTGTG---------------------------GTGCCCTC-GGAGAGCG-----------------------------------T-GAGGCTGAGTG-----GCTC-TTCTTCTGGCGCTTGTCTCATGCAGCGCATG-------CAACGGGAACAGAATCGGAATCTGAATCTGAAACTC------TGGTGTTGCAC--------------------------------------------TTGTTGTGTTT---ATCGC--CTACCCGCTGAGCTGAAC--------AAATGGC-------------ACACAGGCGA--ACTGTTT-------ATCTAC-CTCT------------------------------------------------CCCT-CTCCAGA---CC--CCAACCC-C-----GG---------ATCCCAGATCCCA-----GCG-------------------AATGTGA-A----------------T-----ATACAACTAACCAATTCCTTTTTGTTT---TCTCT----------ACTT--TCTTTGCAGGGCTTCGTGGCTGCCAGCATTAAGCGGGAGCATGGCGACGAGGTCGAGGT	Size	Hit Count	Total Norm	Total
No Reads

droAna3

ACTTGAACGGGTGCCTCT-GT------------CCCCAC---------------GCGAG--AGTG-----------------------------------CG-ACGCGGAGA------GCCC-TTGTGCCGGCGCTTGACTCATGCAGCGCGG----------------G-------------------------TCTG--------TGTGCAC--------------------------------------------TTGGTGTGTTT---ATCGC--CTTCCCGCCGAGATGTA--------------------------------------T--CT--TGTTTTGCAG------------------------------------------------------------------------------------------------------------------------------------------------CTCTGTTCCAACCTCCTTTGTAGACAACCC----CACTAACTACT----------------CTCT----------TCCTTCCCATTTCAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAGCATGGCGACGAGGTCGAGGT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGCGGGAGCATGGCGACGAGGT......	24	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGTATTAAGCGGGAGC...................	19	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAAGCGGGAGCATGGCGACGA.........	25	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAAGCGGGAGCATGGCGACG..........	24	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGCCGCCAGTATTAAGCGGGA.....................	24	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAAGCGGGAGCATGGC..............	20	1	1.00	1	0	0	0	0	1	0

droBip1

TT-------------------------------ACCCACACTCT-----T------GAG--AGA------------------------------------------------------GCTC-TTGTTCTGGCGCTTGACTCATGCAGCGTGTGGCATCCACAACGGCC--------------------------TCAGTGGATGCTGCTGCAC--------------------------------------------TTGTTGTGTTTATCATCGC--CTACCCGCTGAGAT--------------------------------------------TCTGTGTTTTGTATTT----------------------------------------------------------T-------------------------------------------ATTTTGCTA--------GCA-------------------ACCCCT------------------------------ACTAACTAAACTCTATATCTTTCTCTTTCT----------ATC-T-CATTCACAGGGCTTTGTGGCAGCCAGTATTAAGCGGGAGCATGGCGATGAGGTCGAGGT	Size	Hit Count	Total Norm	Total
No Reads

dp5

ACTCGAACGGGTGCAGTTTTTGTTGCTGTCATTGCTTCTGC------TTTGTGAGAGAT--AGAGATACAATGAGTGGGAGTGGGAGAGGGAGAGGGACATGGAGAGTGAGTGAAACAGCTC-TTATGTTGGCGCTTGACTCATGCAGCGCTGC-------CAACGCGAG-------------------------ACGA--------GATGCACTCGAAGACAGCAGAAGCAGGAGCAGCAGAATTTACGCTCCATTGTTGTTTCTTTT---ATCGTGGCTACCCGCTGAGATAAAGCAGTGCACAC--------------------------A-----------TTGCATACATTAACTCATACATACTCATTCACTCATAAGCAAAATAACATTTTGATTCTCATATTTTCC-TTCCTG-GAAGCCG-----AA--------------------------TTGTTAAAGTTCAAGTGTGACTAATTGAATGGAC----A-T----------------T-------------TTT--CT-----------------TGT----------CTCCT-TTTTTGCAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAACATGGCGACGAGGTTGAGGT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAAGCGGGAACATG................	18	1	2.00	2	0	1	0	0	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATGGCGACGAGGTTGAGG.	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAGCGGGAACATGGCGAC...........	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................AGAGGGACATGGAGAGTGAGTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGAACATGGCGACGAGGTTGAG..	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAGTATTAAGCGGGAACATGGC..............	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAACATGGCGACGAGGTTGAGG.	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTATTAAGCGGGAACATGGCGACGA.........	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCGTGGCCGCCAGTATTAAGCGGG......................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

ACTCGAACGGGTGCAGTTTTTGTTGCTGTCATTGCTTCTGCTTTTCACTTGTGAGAGAT--AGAGATACAGTGAGTGGGAGTGGGAGAGGGAGAGGGACATGGAGAGTGAGTGAAACAGCTC-TTATGTTGGCGCTTGACTCATGCAGCGCTGC-------CAACGCGAG-------------------------ACGA--------GATGCACTCGAAGACAGCAGAAGCAGGAGCAGCAGAATTTACGCTCCATTGTTGTTTCTTTT---ATCGTGGCTACCCGCTGAGATAAAGCAGTGCACAC--------------------------A-----------TTGCATACATTAACTCATACATACTCATTCACTCATAAGCAAAATAACATTTTGATTCTCATATATTCC-TTCCTG-GAAGCCG-----AA--------------------------TTGTTAAAGTTCAAGTGTGACTAATTGAATGGAC----A-T----------------T-------------TTT--CT-----------------TGT----------CTCCT-TTTTTGCAGGGCTTCGTGGCCGCCAGTATTAAGCGGGAACATGGCGACGAGGTTGAGGT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
...................................................................ACAGTGAGTGGGAGTGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	4	9.25	37	0	16	0	0	0	21
...................................................................ACAGTGAGTGGGAGTGGGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	4.00	4	0	1	0	0	0	3
...................................................................ACAGTGAGTGGGAGTGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACATGGCGACGAGGTTGAGGT	23	1	1.00	1	0	1	0	0	0	0
...................................................................ACAGTGAGTGGGAGTGGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
..................................................................TACAGTGAGTGGGAGTGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAAGCGGGAACATGGCGACGAG........	26	1	1.00	1	0	0	0	0	0	1
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACATGGCGACGAGGTTGAGG.	22	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAAGCGGGAACATGGC..............	20	1	1.00	1	0	0	0	0	0	1
....................................................................CAGTGAGTGGGAGTGGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0
....................................................................CAGTGAGTGGGAGTGGGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	1	0	0	0	0
.....................................................................AGTGAGTGGGAGTGGGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	8	0.25	2	0	1	0	0	0	1

droWil2

TTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-----------------TCT----------GTTTT-TTTTTTCAGGGTTTCGTTGCCGCCAGTATTAAGCGTGAACATGGCGATGAGGTCGAAGT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAGCGTGAACATGGC..............	18	1	3.00	3	0	2	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATTAAGCGTGAACATGGC..............	21	1	2.00	2	0	0	0	2	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGTGAACATGGCGATGAGGTC.....	24	1	2.00	2	0	0	1	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACATGGCGATGAGGTCGAA..	23	1	2.00	2	0	0	1	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTGAACATGGCGATGAGGT......	22	1	1.00	1	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACATGGCGATGAGGTC.....	20	1	1.00	1	0	0	1	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACATGGCGATGAGGTCGAAGT	23	1	1.00	1	0	0	1	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTATTAAGCGTGAACATGGC..............	22	1	1.00	1	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCCAGTATTAAGCGT.......................	19	1	1.00	1	0	0	1	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACATGGCGATGAGGTCGA...	20	1	1.00	1	0	0	0	0	1
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAAGCGTGAACATGGCG.............	21	1	1.00	1	0	0	1	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGCCAGTATTAAGCGT.......................	21	1	1.00	1	0	0	1	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGCCGCCAGTATTAAGCGT.......................	24	1	1.00	1	0	0	1	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAGCGTGAACATGGCGATGAGGT......	26	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACATGGCGATGAGGTCGAAGT	25	1	1.00	1	0	0	1	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAGCGTGAACATGGCGATGAGGTC.....	27	1	1.00	1	0	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCCAGTATTAAGCGTGAACATG................	26	1	1.00	1	0	1	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAAGCGTGAACATGGC..............	20	1	1.00	1	0	0	1	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCGCCAGTATTAAGCGT.......................	20	1	1.00	1	0	1	0	0	0

droVir3

T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------TGT----------CTTCA-TTTTTGCAGGGCTTCGTTGCCGCCAGTATTAAGCGCGAACATGGCGACGAGGTGGAGGT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGCGACGAGGTGGAGGT	20	1	2.00	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATTAAGCGCGAACATGGC..............	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAGCGCGAACATGGC..............	18	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGTATTAAGCGCGAAC...................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAACATGGCGACGAGGTGGA...	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCGCCAGTATTAAGCGCGAA....................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACATGGCGACGAGGTGG....	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0

droMoj3

TCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------CGT-----T---TC-TTA-TTTTTGCAGGGCTTCGTTGCCGCCAGTATTAAGCGCGAACATGGCGACGAGGTGGAGGT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAGCGCGAACATGGCGACGA.........	23	1	2.00	2	2	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAGTATTAAGCGCGAACATGG...............	24	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAGCGCGAACATGGCGAC...........	21	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAGTATTAAGCGCGAA....................	19	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---TC-TTA-TTTTTGCAGGGCTTCGTTGC.......................................	26	1	1.00	1	0	1	0	0	0	0

droGri2

CTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGTTG---A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-CTTTTGCAGGGCTTCGTTGCCGCCAGTATTAAGCGCGAACATGGCGACGAGGTGGAGGT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dsi_29385

2r:21357209-21357358 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads