ID:

dsi_29349

 Coordinate:

2l:21577246-21577395 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.9 -14.8 -14.6

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron+
AT_richLow_complexityLow_complexity+

Sense Strand Reads

TATTCAACAATATCTATCGATATTCCAGAAAAATTATGAAATTTCAAGTTTGCATTCACACTAGCTAATAGTCGGGGAAATCGACTATACCATTCTCTCTTGTTTTGAATAAGTTCCTTGGATGAAATGAACAACTAGAAGAAAATTTATTTAATCAAAATAATAACAATTTAATTAACCCCAAACTATTCACCTTCCAGTGCCTATGCCGCTACCTTCCAGCCTCCACACAAGTCATCAATGTTTTCTA
***************************************************.........((((...((((((((.....)))))))).(((......((((((...)))))).....))).............)))).........******************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 SRR902008
ovaries
 SRR902009
testis
...................................................GCATTCACACTAGCTAATAGTCGGG.............................................................................................................................................................................. 25 0 1 13.00 13 13 0 0 0 0 0 0 0
...................................................GCATTCACACTAGCTAATAGTCGG............................................................................................................................................................................... 24 0 1 7.00 7 3 4 0 0 0 0 0 0
...................................................GCATTCACACTAGCTAATAGTCGGGGA............................................................................................................................................................................ 27 0 1 4.00 4 2 2 0 0 0 0 0 0
..................................................TGCATTCACACTAGCTAATAGTCGGGGA............................................................................................................................................................................ 28 0 1 3.00 3 0 3 0 0 0 0 0 0
...................................................GCATTCACACTAGCTAATAGTCGGGG............................................................................................................................................................................. 26 0 1 2.00 2 2 0 0 0 0 0 0 0
......................................................................................................................TGGATGAAATGAACAACTAGAAGAAAATT....................................................................................................... 29 0 1 2.00 2 1 0 0 0 1 0 0 0
.............................................................................................................................................................................................TCACCTTCCAGTGCCTATGCCGC...................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0
..................................................................................................................TCCTTGGATGAAATGAACAACTAGAAGA............................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................TGCATTCACACTAGCTAATAGTCGGG.............................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................................................................TTTGAATAAGTTCCTTGGATGAAA........................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................................................................TGAACAACTAGAAGAAAATTTATTT.................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0
.......................TCCAGAAAAATTATGAAATTTCAAGTT........................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................TTGTTTTGAATAAGTTCCTTGGATGAA............................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................TATTCACCTTCCAGTGCCTATGCCGC...................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................TGGATGAAATGAACAACTAGAAAAAAATT....................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................TCCTTGGATGAAATGAACAACTAGA............................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................................TGGATGAAATGAACAACTAGAAGAAAAT........................................................................................................ 28 0 1 1.00 1 0 0 0 0 0 0 1 0
..............................................................................AATCGACTATACCATTCT.......................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0
.....................................................ATTCACACTAGCTAATAGTCGGGG............................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................TTCACACTAGCTAATAGTCGGGGAAAT......................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0
.....................................................ATTCACACTAGCTAATAGTCGGGGA............................................................................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0
...............................................................................................................................TGAACAACTAGAAGAAAATTTATTTAAT............................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0
.................................TTATGAAATTTCAAGTTCGCATTCACAC............................................................................................................................................................................................. 28 1 1 1.00 1 0 0 1 0 0 0 0 0
.....................................................................................................................TTGGATGAAATGAACAAC................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0
.ATTCAACAATATCTATCGATA.................................................................................................................................................................................................................................... 21 0 2 0.50 1 0 0 1 0 0 0 0 0
..................................................................AATAGTCGGGGAAATCGA...................................................................................................................................................................... 18 0 2 0.50 1 0 0 0 1 0 0 0 0
..........................AGAAAAATTATGAAAT................................................................................................................................................................................................................ 16 0 20 0.25 5 0 0 0 5 0 0 0 0
...........................................................................................................................GAAATGATCAACAAGAAGA............................................................................................................ 19 2 9 0.22 2 2 0 0 0 0 0 0 0
................................................................................TCGACTATACCATACTCTCTTGTT.................................................................................................................................................. 24 1 5 0.20 1 0 1 0 0 0 0 0 0
...................................................................ATAGTCGGGGAAATCGACTAT.................................................................................................................................................................. 21 0 7 0.14 1 0 0 0 1 0 0 0 0
.......CAATATCTATCGATATTCCAGAAAAAT........................................................................................................................................................................................................................ 27 0 7 0.14 1 0 0 0 1 0 0 0 0
..............TATCGATATTCCAGAAAAATTATGA................................................................................................................................................................................................................... 25 0 8 0.13 1 0 0 0 0 1 0 0 0
..TTGAACAATATCTATCGATATACCAGA............................................................................................................................................................................................................................. 27 2 8 0.13 1 0 0 0 0 1 0 0 0
...........................GAAAAATTATGAAAT................................................................................................................................................................................................................ 15 0 20 0.10 2 0 0 0 2 0 0 0 0
........................CCAGAAAAATTATGAAAT................................................................................................................................................................................................................ 18 0 20 0.10 2 0 0 0 2 0 0 0 0
.......CAATATCTATCGATATTCCAGAA............................................................................................................................................................................................................................ 23 0 12 0.08 1 0 0 1 0 0 0 0 0
...........................................................................GGAAAGCGACGATACCATTG........................................................................................................................................................... 20 3 14 0.07 1 0 0 0 0 0 0 0 1
......................TTCCAGAAAAAATATGAAATTTCACGTT........................................................................................................................................................................................................ 28 2 15 0.07 1 0 1 0 0 0 0 0 0
.......CAATATCTATCGTTATTTCAGAAAA.......................................................................................................................................................................................................................... 25 2 17 0.06 1 1 0 0 0 0 0 0 0
.......CAATATCTATCGATATTCTAGTA............................................................................................................................................................................................................................ 23 2 20 0.05 1 0 0 1 0 0 0 0 0
............TCTATCGATATTCCAGA............................................................................................................................................................................................................................. 17 0 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................ATTCTCTCTTGTTTTG............................................................................................................................................... 16 0 20 0.05 1 0 0 0 1 0 0 0 0
...................................................GCATTCACACTAGCT........................................................................................................................................................................................ 15 0 20 0.05 1 0 0 0 1 0 0 0 0

Anti-sense strand reads

ATAAGTTGTTATAGATAGCTATAAGGTCTTTTTAATACTTTAAAGTTCAAACGTAAGTGTGATCGATTATCAGCCCCTTTAGCTGATATGGTAAGAGAGAACAAAACTTATTCAAGGAACCTACTTTACTTGTTGATCTTCTTTTAAATAAATTAGTTTTATTATTGTTAAATTAATTGGGGTTTGATAAGTGGAAGGTCACGGATACGGCGATGGAAGGTCGGAGGTGTGTTCAGTAGTTACAAAAGAT
*******************************************************************************************************.........((((...((((((((.....)))))))).(((......((((((...)))))).....))).............)))).........*************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 GSM343915
embryo
 M025
embryo
 M023
head
....................................ACTTTAAAGTTCAAGCGTAAGTGTG............................................................................................................................................................................................. 25 1 3 4.67 14 11 1 0 0 2 0 0 0 0
.....................................CTTTAAAGTTCAAGCGTAAGTGTGAT........................................................................................................................................................................................... 26 1 5 2.20 11 0 3 7 0 1 0 0 0 0
....................................ACTTTAAAGTTCAAGCGTAAGTGTGAT........................................................................................................................................................................................... 27 1 3 2.00 6 0 6 0 0 0 0 0 0 0
......................................TTTAAAGTTCAAGCGTAAGTGTGAT........................................................................................................................................................................................... 25 1 7 1.14 8 0 7 1 0 0 0 0 0 0
...............................................................................................AGAGAACAAAACTTATTCAAGGAACCTA............................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................ATGATGGAAGGTCGGAGGTGTGT.................. 23 2 1 1.00 1 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................................GGAGGTGTGTTCAGTAG........... 17 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.......................................TTAAAGTTCAAGCGTAAGTGTGAT........................................................................................................................................................................................... 24 1 10 0.80 8 0 6 2 0 0 0 0 0 0
..........ATAGATAGCTATAAGGTCTTTTTAATACT................................................................................................................................................................................................................... 29 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................GGGATTTGTGAAGTGGAAGGT................................................... 21 3 3 0.33 1 0 0 0 0 0 0 1 0 0
............AGATAGCTATAAGGTCTTATTAATTCT................................................................................................................................................................................................................... 27 2 6 0.33 2 0 0 1 0 1 0 0 0 0
..............................................TCAAACGTAAGTGTG............................................................................................................................................................................................. 15 0 7 0.29 2 0 0 0 2 0 0 0 0 0
.........................................................................................GGTAAGGGAGAACTAGACTT............................................................................................................................................. 20 3 4 0.25 1 0 0 0 0 0 0 0 1 0
....................................................................................................................................TTGAGCTTCTTTTAAAT..................................................................................................... 17 1 4 0.25 1 0 0 0 1 0 0 0 0 0
..........ATAGATAGCTATAAGGACTTTTTAATACT................................................................................................................................................................................................................... 29 1 4 0.25 1 0 0 0 0 1 0 0 0 0
..........ATAGAGGGCTATAAGGTCTTGTTAATACT................................................................................................................................................................................................................... 29 3 4 0.25 1 1 0 0 0 0 0 0 0 0
............AGATAGCTATAAGGACTTTTTAATACT................................................................................................................................................................................................................... 27 1 6 0.17 1 0 0 1 0 0 0 0 0 0
............AGATAGCTATAAGGTCTTATTAATT..................................................................................................................................................................................................................... 25 2 7 0.14 1 0 0 1 0 0 0 0 0 0
......................................TTTAAAGTTCAAGCGTAAGTGTG............................................................................................................................................................................................. 23 1 7 0.14 1 1 0 0 0 0 0 0 0 0
.......................................TGAAAGTACAAACATAAGTGTGA............................................................................................................................................................................................ 23 3 7 0.14 1 0 0 0 0 0 0 0 0 1
...............................................................................................................TCAAGGACCCTACTT............................................................................................................................ 15 1 7 0.14 1 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................AGTTTTATTATTGTAAA............................................................................... 17 1 16 0.13 2 0 0 0 0 2 0 0 0 0
.........TATAGATAGCTATAAGGTCTTTTT......................................................................................................................................................................................................................... 24 0 8 0.13 1 1 0 0 0 0 0 0 0 0
..........ATAGATAGCTATAAGGTCTTTTTAATAT.................................................................................................................................................................................................................... 28 1 10 0.10 1 0 0 0 0 1 0 0 0 0
...............................................CAAACGTAAGTGTGAT........................................................................................................................................................................................... 16 0 20 0.10 2 0 0 0 2 0 0 0 0 0
........................................TAAAGTTCAAGCGTAAGTGTGAT........................................................................................................................................................................................... 23 1 11 0.09 1 0 0 0 0 1 0 0 0 0
..........................................................................................................................ACGTTGCTTGTTGCTCTTCT............................................................................................................ 20 3 18 0.06 1 0 0 1 0 0 0 0 0 0
.......................................................................................................AAACTTGTTCATGGAATCT................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:21577196-21577445 + dsi_29349 TATTCAA-CAATATCTATCGATATTCCAGAAAAAT---TAT-------------GAAATTT----C----A-A-GTTTGCATTCACACTA------------------------------------------GCTAATAGTCGGGGAAATCGACTATACCATTCTCTCTTGTTTTGAA----TAAGTTCCTTGGATGAAATGAACAACT-----------------------------------------------------------------------------------------------------------AGAAGAAAATTTATTTAATCAAAATAATA----------------------------------ACAATTTAATTAACCCCAAACTAT----TCACCTTCCAGTG-CCTATGC-CGCTA-----CCTTCCAGCCTCCACACAAGTCATCAATGTTTTCTA
droSec2 scaffold_172:17761-18010 + TATTTAA-CAATATCTATCGATATTCCAGAAAAAT---TAT-------------GAAATTT----C----A-C-GTTTGCATTCACACTA------------------------------------------GCTAATAGTCGGGGAAATCGACTATAGCATTCTCTCTTGTTTTGAA----TAAGTTCCTTGGATGAAATGAACAACT-----------------------------------------------------------------------------------------------------------AGAAGAAAATTTATTTAATCAAAATAATA----------------------------------ACAATTTAATTAACCCCAAACTAT----TCACCTTCCAGTG-CCTATGC-CGCTA-----ACTTCCAGCCTCCACACAAGTCATCAATGTTTTCTA
dm3 chr2L:22311545-22311915 + TATTCCC-CAATATCTATCGATATCCCACAAAAAT---GAT------------AAAAATTT----C----G-C-GTTTGCATTCATACTA---------------------------GCTGAGTAAAGGGTATCTGATAGTTGGGGAAAACGACTATAGCATTCTCTCTTGTTGTATATCTGTAAGTTCATTGGATGAATTGAAT---TT--------CCTCCCAATTTTTCCTTTTTTTATTTTTTTTTTGTTTGTTGAACAAGGTGCTTGTTAAAGAAACTACAATTGAGCCAAGACAATTTTATAAAACTACAAAAAGAAAAATTATTTAATCAAAATAATA----------------------------------AAAATTTAATTAACCCCAAACTTTTCAATCACCTTCCAGTG-CCTATGCCCGCCA-----CCTTCCAGCCTCCACACAAGTCATCAATGTTTTCTA
droEre2 scaffold_4929:22471230-22471408 + TTTCCC--CCATTTCAACCGATATTCCAGAA-AAT---GTT-------------GAAATTT----C----T-A-GTTCGCACTTCCACTG---------------------------GC------------------TAGTCAGGGAACTCGACTATAGCATTCTCTCTTGTTTTAAT-A--TGAGT------GT--------TGAAATATC------------------------------------------------------------------------------------------------------------------ATATTTACTCAACATGACAAAGATTTTGAATGGTAA---------------------TTTACTTT--CACGAACCAC----TCAC----------------------------------------------------------------
droYak3 v2_chrUn_2192:41860-42088 + AAC------------TGTCAGTGTTTAA-----------------------------GACT----C----T-A-CTTCGCACTTCCACCA---------------------------GCTGAGTAACGGGTATCAGATAGTCGGGGAACTCGACTATAGCGTTCCCACTTGTTTTTTT-------------TATATTAAAT--TAAATTATCAGACTTGT------TTAAAAATATTAATATTTTTTTTTTA-----------------------------------------------------------------------------------------------------------------------------------------TAAATTTGAGCTAT----TGTTTTTCTAGACTCCAATAT-AGCTATATCTTCTTGTGGACTTCACTCTAGCTGTT-----TTTTTT
droEug1 scf7180000405875:49552-49700 + ATTTCTATCAATATCTATCGATTTATCAAAA-ATT---TTT-------------AAAATCG------------------GAAATCTACTAGCAAAATGAACACTTTTAAATTGTGTAAAAGAATAACGGGTATCTTATAGTCGCGGCACTCGACTATAGCGTTTCCTCTTGTTTTAAA----TAATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301624:29684-29842 + TAGCCAA-AATAGCCGGTAGGTGGCGCATATATATATATAT-------------ACAGTTT----T----A-T---TTTCAT--TCTCGA---------------------------GCTGAGTAACGGTTATTTAATAGTCGGGTCACTCGACTGTAACGTTCTTCCTTGTTTTATT-------------TAAAAAAAATGGAAAATTAGC--------------------------------------------------------------------------------------------------------------AAGTATATTTCATCA------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000412704:8272-8476 - TGTTTAT-CAATACCTATCGAAATGTAGAAGAAAT---TTT------------TCAAATCGTTTTC----AAAGTTTCGCACTCCCTTTA---------------------------CCTGAGTAACGGGTATCTGATAGTCGGGGCACCCGACTATAGCATTCTCTCTTGTTTTTAA----ATATACTC----------------------------------------------------------------------------------------------ATATATGGGTA---AAATTTTG-ATAAGTACCAAGATC------------------------------------GTAATTTCCCTCCGAATAATAAAAAATTATTT-------------------------------------------------------------------------------------
droRho1 scf7180000779120:1879-2104 + GAGTCGA-CGTTAATTCTCGATAAGG------ATT---TCTATTAAAGGAAATTGCCATGGTTTTCATCTAAA------------------------------------GTTGTTTAGCTGAGTAACGGGTATCTAATAGTCGAGGCACTCGACTATAGCGTTCTCTCTTGTTTTTGG----CTAGCGTCTTGACTAAGATTTGAAGC--------------------------------------------------------------------------------------A-----------------------AAATACACTTAAAAAGTGAGATTGCAA----------------------------------ACAATGTCTCGGACCTAAAAATGC----T---TTTCAAGTG-CTGATG------------------------------------------------
droFic1 scf7180000454077:2032749-2032778 + AAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTTAACCATGATAATA----------------------------------ATAATCT-----------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TATTCAA-CAATATCTATCGATATTCCAGAAAAAT---TAT-------------GAAATTT----C----A-A-GTTTGCATTCACACTA------------------------------------------GCTAATAGTCGGGGAAATCGACTATACCATTCTCTCTTGTTTTGAA----TAAGTTCCTTGGATGAAATGAACAACT-----------------------------------------------------------------------------------------------------------AGAAGAAAATTTATTTAATCAAAATAATA----------------------------------ACAATTTAATTAACCCCAAACTAT----TCACCTTCCAGTG-CCTATGC-CGCTA-----CCTTCCAGCCTCCACACAAGTCATCAATGTTTTCTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................GCATTCACACTA------------------------------------------GCTAATAGTCGGG..........................................................................................................................................................................................................................................................................................................................................25113.0013000000130000000000
..............................................................................GCATTCACACTA------------------------------------------GCTAATAGTCGG...........................................................................................................................................................................................................................................................................................................................................2417.00700000030400000000
..............................................................................GCATTCACACTA------------------------------------------GCTAATAGTCGGGGA........................................................................................................................................................................................................................................................................................................................................2714.00400000020200000000
.............................................................................TGCATTCACACTA------------------------------------------GCTAATAGTCGGGGA........................................................................................................................................................................................................................................................................................................................................2813.00300000000300000000
..............................................................................GCATTCACACTA------------------------------------------GCTAATAGTCGGGG.........................................................................................................................................................................................................................................................................................................................................2612.00200000020000000000
...............................................................................................................................................................................................TGGATGAAATGAACAACT-----------------------------------------------------------------------------------------------------------AGAAGAAAATT....................................................................................................................................................2912.00200000011000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TCACCTTCCAGTG-CCTATGC-CGC...........................................2311.00100000000100000000
...........................................................................................................................................................................................TCCTTGGATGAAATGAACAACT-----------------------------------------------------------------------------------------------------------AGAAGA.........................................................................................................................................................2811.00100000010000000000
.............................................................................TGCATTCACACTA------------------------------------------GCTAATAGTCGGG..........................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
............................................................................................................................................................................TTTGAA----TAAGTTCCTTGGATGAAA...................................................................................................................................................................................................................................................................................2411.00100000000100000000
........................................................................................................................................................................................................TGAACAACT-----------------------------------------------------------------------------------------------------------AGAAGAAAATTTATTT...............................................................................................................................................2511.00100000000100000000
........................TCCAGAAAAAT---TAT-------------GAAATTT----C----A-A-GTT..............................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
........................................................................................................................................................................TTGTTTTGAA----TAAGTTCCTTGGATGAA....................................................................................................................................................................................................................................................................................2711.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TAT----TCACCTTCCAGTG-CCTATGC-CGC...........................................2611.00100000010000000000
...........................................................................................................................................................................................TCCTTGGATGAAATGAACAACT-----------------------------------------------------------------------------------------------------------AGA............................................................................................................................................................2511.00100000000100000000
...............................................................................................................................................................................................TGGATGAAATGAACAACT-----------------------------------------------------------------------------------------------------------AGAAGAAAAT.....................................................................................................................................................2811.00100000000000010000
...................................................................................................................................................AATCGACTATACCATTCT......................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
................................................................................ATTCACACTA------------------------------------------GCTAATAGTCGGGG.........................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
.................................................................................TTCACACTA------------------------------------------GCTAATAGTCGGGGAAAT.....................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
................................................................................ATTCACACTA------------------------------------------GCTAATAGTCGGGGA........................................................................................................................................................................................................................................................................................................................................2511.00100000000010000000
........................................................................................................................................................................................................TGAACAACT-----------------------------------------------------------------------------------------------------------AGAAGAAAATTTATTTAAT............................................................................................................................................2811.00100000000100000000
..............................................................................................................................................................................................TTGGATGAAATGAACAAC...........................................................................................................................................................................................................................................................................1811.00100000000001000000
.ATTCAA-CAATATCTATCGATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100000000010000000
.......................................................................................................................................AATAGTCGGGGAAATCGA..................................................................................................................................................................................................................................................................................................................................1820.50100000000001000000
...........................AGAAAAAT---TAT-------------GAAAT................................................................................................................................................................................................................................................................................................................................................................................................................................16200.25500000000005000000
........................................................................................................................................ATAGTCGGGGAAATCGACTAT..............................................................................................................................................................................................................................................................................................................................2170.14100000000001000000
........CAATATCTATCGATATTCCAGAAAAAT---.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.14100000000001000000
...............TATCGATATTCCAGAAAAAT---TAT-------------GA...................................................................................................................................................................................................................................................................................................................................................................................................................................2580.13100000001000000000
............................GAAAAAT---TAT-------------GAAAT................................................................................................................................................................................................................................................................................................................................................................................................................................15200.10200000000002000000
.........................CCAGAAAAAT---TAT-------------GAAAT................................................................................................................................................................................................................................................................................................................................................................................................................................18200.10200000000002000000
........CAATATCTATCGATATTCCAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................23120.08100000000010000000
.............TCTATCGATATTCCAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000010000000000
................................................................................................................................................................ATTCTCTCTTGTTTTG...........................................................................................................................................................................................................................................................................................................16200.05100000000001000000
..............................................................................GCATTCACACTA------------------------------------------GCT....................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
droSec2
TATTTAA-CAATATCTATCGATATTCCAGAAAAAT---TAT-------------GAAATTT----C----A-C-GTTTGCATTCACACTA------------------------------------------GCTAATAGTCGGGGAAATCGACTATAGCATTCTCTCTTGTTTTGAA----TAAGTTCCTTGGATGAAATGAACAACT-----------------------------------------------------------------------------------------------------------AGAAGAAAATTTATTTAATCAAAATAATA----------------------------------ACAATTTAATTAACCCCAAACTAT----TCACCTTCCAGTG-CCTATGC-CGCTA-----ACTTCCAGCCTCCACACAAGTCATCAATGTTTTCTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................TCTCTCTTGTTTTGAA----TAAGTTCCT............................................................................................................................................................................................................................................................................................2512.0022000
.................................................................................TTCACACTA------------------------------------------GCTAATAGTCGGGG.........................................................................................................................................................................................................................................................................................................................................2311.0011000
..........ATATCTATCGATATTCCAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................20120.0811000
dm3
TATTCCC-CAATATCTATCGATATCCCACAAAAAT---GAT------------AAAAATTT----C----G-C-GTTTGCATTCATACTA---------------------------GCTGAGTAAAGGGTATCTGATAGTTGGGGAAAACGACTATAGCATTCTCTCTTGTTGTATATCTGTAAGTTCATTGGATGAATTGAAT---TT--------CCTCCCAATTTTTCCTTTTTTTATTTTTTTTTTGTTTGTTGAACAAGGTGCTTGTTAAAGAAACTACAATTGAGCCAAGACAATTTTATAAAACTACAAAAAGAAAAATTATTTAATCAAAATAATA----------------------------------AAAATTTAATTAACCCCAAACTTTTCAATCACCTTCCAGTG-CCTATGCCCGCCA-----CCTTCCAGCCTCCACACAAGTCATCAATGTTTTCTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................TA---------------------------GCTGAGTAAAGGGTATCTGATAG...............................................................................................................................................................................................................................................................................................................................................2597.446700000000000000000000000000000000000000001010100000200000010000000000000000000000000000100000000000000000000000000000000000000000000000000000000004001000000000000000000000000000000000000000104080030600000011000000000000000301220000000000000000000000000000000000000000000000000000000000000000001100000000730000000000000001100000000
........................................................................................TA---------------------------GCTGAGTAAAGGGTATCTGATA................................................................................................................................................................................................................................................................................................................................................2495.004500000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000101003005120000005000000000000000010000000000000000000000000000000000000000000000000000000000000000000000400010000420000000000000001003000000
.....................................................................................................................................................ACGACTATAGCATTCTCT....................................................................................................................................................................................................................................................................................................................1873.572500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011810500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................TGGGGAAAACGACTATAGCATTCTC.....................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................TGAGTAAAGGGTATCTGATAGTTGG...........................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TA---------------------------GCTGAGTAAAGGGTATCTGAT.................................................................................................................................................................................................................................................................................................................................................23112.00220000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100010000000000000000000000000000000000000100002000000005000000000000000200020000000000000000000000000000000000000000000000000000000000000000001100000000110000000000000000100000000
........................................................................................TA---------------------------GCTGAGTAAAGGGTATCTGATAGT..............................................................................................................................................................................................................................................................................................................................................2681.75140000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201001000000000000000000000000000000000000000000000000000000001000000000000000100010000000000000000000000000000000000000000000000000000000000001000000200000000300000000000000000000000000
........................................................................................TA---------------------------GCTGAGTAAAGGGTATCTG...................................................................................................................................................................................................................................................................................................................................................21111.55170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100100000000000000000000000000000000000000001000000004000000000000000000000000000000000000000000000000000000000000000000300050000000000000000100000000000000000000000000000000000
........................................................................................TA---------------------------GCTGAGTAAAGGGTATCTGA..................................................................................................................................................................................................................................................................................................................................................22111.18130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000010000001030000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000200000000020000000000000000001000000
...TCCC-CAATATCTATCGATATCCCACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TTTTTTTTTGTTTGTTGAACAAGGTGCT.............................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................GTAAAGGGTATCTGATAGTTGGGGA........................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................GGTATCTGATAGTTGGGGAAA......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TTAATCAAAATAATA----------------------------------AAA.............................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................GGGAAAACGACTATAGCATTC.......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TTCATACTA---------------------------GCTGAGTAAAGGGTAT......................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................GTATATCTGTAAGTTCATTGGA........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TAAAGGGTATCTGATAGTTGGGGAAA......................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TCCC-CAATATCTATCGATATCCCACAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................GGGTATCTGATAGTTGGGGAAAA.....................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................TGAGTAAAGGGTATCTGATAGTTGGG..........................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAATCACCTTCCAGTG-CCTATGCC..............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................ATCTGATAGTTGGGGAAAACGAC.................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACACAAGTCATCAATGTTTTCTA2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................GATAGTTGGGGAAAACGACTA...............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................TGAGTAAAGGGTATCTGATAGT..............................................................................................................................................................................................................................................................................................................................................22120.6780000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000100000000000000000000000000000000000000000000000000000100000000000000000000000020000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................GTAAAGGGTATCTGATAGTTGG...........................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................GTAAAGGGTATCTGATAGTTG............................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TACTA---------------------------GCTGAGTAAAGGGTAT......................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................GGGTATCTGATAGTTGGGGAAAAA....................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................CGACTATAGCATTCTCTCTTG................................................................................................................................................................................................................................................................................................................21200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000300000000000000000000200010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................A---------------------------GCTGAGTAAAGGGTATCTGATAG...............................................................................................................................................................................................................................................................................................................................................24100.3030000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
TATTCCC-CAATATCTATCGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000
...............................................................................................................................GGGTATCTGATAGTTGGG..........................................................................................................................................................................................................................................................................................................................................18200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
...............................................................................................................................................................................................................................................TATTTTTTTTTTGTTTGT..........................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................TATCTGATAGTTGGGGAA.......................................................................................................................................................................................................................................................................................................................................18200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................A---------------------------GCTGAGTAAAGGGTATCTGATAGT..............................................................................................................................................................................................................................................................................................................................................2590.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TTTTTATTTTTTTTTTGTTT............................................................................................................................................................................................................................20100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................GGGTATCTGATAGTTGGGGAA.......................................................................................................................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................A---------------------------GCTGAGTAAAGGGTATCTGA..................................................................................................................................................................................................................................................................................................................................................21120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000
............................................................................................................................................................................................CATTGGATGAATTGAAA---C..........................................................................................................................................................................................................................................................................1870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................CTA---------------------------GCTGAGTAAAGGGTATCTGATAG...............................................................................................................................................................................................................................................................................................................................................2680.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................................................................................TTTTTATTTTTTTTTTGTT.............................................................................................................................................................................................................................19160.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................ACTA---------------------------GCTGAGTAAAGGGTATCT....................................................................................................................................................................................................................................................................................................................................................22160.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................CTA---------------------------GCTGAGTAAAGGGTATCT....................................................................................................................................................................................................................................................................................................................................................21170.1220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................................................................................ACTA---------------------------GCTGAGTAAAGGGTATCTGA..................................................................................................................................................................................................................................................................................................................................................2490.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................ACTA---------------------------GCTGAGTAAAGGGTATCTGATC................................................................................................................................................................................................................................................................................................................................................2690.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................CTA---------------------------GCTGAGTAAAGGGTATCTGA..................................................................................................................................................................................................................................................................................................................................................23100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................TATAGCATTCTCTCTTGTT..............................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................GACTATAGCATTCTCTCTTGT...............................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000
........................................................................................TA---------------------------GCTGAGTAAAGGGTATCTGAA.................................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000
......................................................................................................................................................CGACTATAGCATTCTCTCTT.................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
TATTCCC-CAATATCTATCGATATCCCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................CTA---------------------------GCTGAGTAAAGGGTATCTGAT.................................................................................................................................................................................................................................................................................................................................................24100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................ACTA---------------------------GCTGAGTAAAGGGTAT......................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
..TTCCC-CAATATCTATCGATATCCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TTTTTTTTTTGTTTGTTG........................................................................................................................................................................................................................18110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.........................................................................................A---------------------------GCTGAGTAAAGGGTATCTG...................................................................................................................................................................................................................................................................................................................................................20120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................CTA---------------------------GCTGAGTAAAGGGTATCTGATAT...............................................................................................................................................................................................................................................................................................................................................26130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................TGAGTAAAGGGTATCTGATAG...............................................................................................................................................................................................................................................................................................................................................21140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTTCCC--CCATTTCAACCGATATTCCAGAA-AAT---GTT-------------GAAATTT----C----T-A-GTTCGCACTTCCACTG---------------------------GC------------------TAGTCAGGGAACTCGACTATAGCATTCTCTCTTGTTTTAAT-A--TGAGT------GT--------TGAAATATC------------------------------------------------------------------------------------------------------------------ATATTTACTCAACATGACAAAGATTTTGAATGGTAA---------------------TTTACTTT--CACGAACCAC----TCAC----------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................TATTCCAGAA-AAT---GTT-------------GAAATT...............................................................................................................................................................................................................................................................................................................................................................................................................................22200.0511000000
droYak3
AAC------------TGTCAGTGTTTAA-----------------------------GACT----C----T-A-CTTCGCACTTCCACCA---------------------------GCTGAGTAACGGGTATCAGATAGTCGGGGAACTCGACTATAGCGTTCCCACTTGTTTTTTT-------------TATATTAAAT--TAAATTATCAGACTTGT------TTAAAAATATTAATATTTTTTTTTTA-----------------------------------------------------------------------------------------------------------------------------------------TAAATTTGAGCTAT----TGTTTTTCTAGACTCCAATAT-AGCTATATCTTCTTGTGGACTTCACTCTAGCTGTT-----TTTTTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTTCTTGTGGACTTCACTCTAGC...............26180.8315011400000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGACTCCAATAT-AGCTATATCT....................................26140.29404000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGTGGACTTCACTCTAGCTGTT-----......26180.28505000000000
..........................AA-----------------------------GACT----C----T-A-CTTCGCACTTCC.....................................................................................................................................................................................................................................................................................................................................................................................................21160.19303000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATCTTCTTGTGGACTTCACTCTAGC...............28160.19302100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCTTGTGGACTTCACTCTAGCTGT............27180.17302100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGTGGACTTCACTCTAGCTGTT-----T.....27180.11201100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGACTTCACTCTAGCTGTT-----TTT...25180.11202000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTTCTTGTGGACTTCACTCTAG................25180.11201100000000
...........................................................................TTCGCACTTCCACCA---------------------------GCTGAGTAACGGG.........................................................................................................................................................................................................................................................................................................................................................28200.10200000000002
...................................................................................TCCACCA---------------------------GCTGAGTAACGGGTATCAGA..................................................................................................................................................................................................................................................................................................................................................27200.10200200000000
.................TCAGTGTTTAA-----------------------------GACT----C----T-A-CTTCGCAC.........................................................................................................................................................................................................................................................................................................................................................................................................26110.09100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGACTCCAATAT-AGCTATATC.....................................25140.07100000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGACTCCAATAT-AGCTATATC.....................................24150.07101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGACTCCAATAT-AGCTATATCT....................................25150.07101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TAGACTCCAATAT-AGCTATATCTT...................................24160.06101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCTAGACTCCAATAT-AGCT..........................................22160.06100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGCTAT----TGTTTTTCTAGACT......................................................24160.06101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CAATAT-AGCTATATCTTCTTGTGGACT.........................27160.06101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTCCAATAT-AGCTATATCTTCTTG...............................27160.06101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TAGACTCCAATAT-AGCTATATCTTCT.................................26160.06101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................T-AGCTATATCTTCTTGTGGACTTCACT....................27170.06101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................T-AGCTATATCTTCTTGTGGACTTCACTC...................28170.06101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................T-AGCTATATCTTCTTGTGGACTTCAC.....................26170.06101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-AGCTATATCTTCTTGTGGACTTCAC.....................28170.06101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-AGCTATATCTTCTTGTGGACT.........................24170.06110000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGTGGACTTCACTCTAGCTGTT-----TT....27180.06101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTCTTGTGGACTTCACTCTAGC...............25180.06101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGACTTCACTCTAGCTGTT-----TT....24180.06101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGTGGACTTCACTCTAGCTGTT-----......25180.06101000000000
........................................................................................CA---------------------------GCTGAGTAACGGGTATCAGATAGT..............................................................................................................................................................................................................................................................................................................................................26200.05100100000000
............................................................................TCGCACTTCCACCA---------------------------GCTGAGTAACGG..........................................................................................................................................................................................................................................................................................................................................................26200.05100100000000
........................................................................................CA---------------------------GCTGAGTAACGGGTATCAGATAG...............................................................................................................................................................................................................................................................................................................................................25200.05100000010000
.....................................................................................................................................................................................................................................................TTTTTTA-----------------------------------------------------------------------------------------------------------------------------------------TAAATTTGAGCTAT----TGTT................................................................25200.05100000010000
.....................................................................................CACCA---------------------------GCTGAGTAACGGGTATCAGAT.................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
......................................................................................ACCA---------------------------GCTGAGTAACGGGTATCAGA..................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
..................................................................................TTCCACCA---------------------------GCTGAGTAACGGGTATCAGA..................................................................................................................................................................................................................................................................................................................................................28200.05101000000000
............................................................................TCGCACTTCCACCA---------------------------GCTGAGT...............................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
.............................................................................CGCACTTCCACCA---------------------------GCTGAGTAACGG..........................................................................................................................................................................................................................................................................................................................................................25200.05100010000000
...............................................................................CACTTCCACCA---------------------------GCTGAGTAACGGG.........................................................................................................................................................................................................................................................................................................................................................24200.05100010000000
.......................................................................................................................................................................................................................................................TTTTA-----------------------------------------------------------------------------------------------------------------------------------------TAAATTTGAGCTAT----TG..................................................................21200.05100100000000
droEug1
ATTTCTATCAATATCTATCGATTTATCAAAA-ATT---TTT-------------AAAATCG------------------GAAATCTACTAGCAAAATGAACACTTTTAAATTGTGTAAAAGAATAACGGGTATCTTATAGTCGCGGCACTCGACTATAGCGTTTCCTCTTGTTTTAAA----TAATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TAGCCAA-AATAGCCGGTAGGTGGCGCATATATATATATAT-------------ACAGTTT----T----A-T---TTTCAT--TCTCGA---------------------------GCTGAGTAACGGTTATTTAATAGTCGGGTCACTCGACTGTAACGTTCTTCCTTGTTTTATT-------------TAAAAAAAATGGAAAATTAGC--------------------------------------------------------------------------------------------------------------AAGTATATTTCATCA------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TGTTTAT-CAATACCTATCGAAATGTAGAAGAAAT---TTT------------TCAAATCGTTTTC----AAAGTTTCGCACTCCCTTTA---------------------------CCTGAGTAACGGGTATCTGATAGTCGGGGCACCCGACTATAGCATTCTCTCTTGTTTTTAA----ATATACTC----------------------------------------------------------------------------------------------ATATATGGGTA---AAATTTTG-ATAAGTACCAAGATC------------------------------------GTAATTTCCCTCCGAATAATAAAAAATTATTT-------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GAGTCGA-CGTTAATTCTCGATAAGG------ATT---TCTATTAAAGGAAATTGCCATGGTTTTCATCTAAA------------------------------------GTTGTTTAGCTGAGTAACGGGTATCTAATAGTCGAGGCACTCGACTATAGCGTTCTCTCTTGTTTTTGG----CTAGCGTCTTGACTAAGATTTGAAGC--------------------------------------------------------------------------------------A-----------------------AAATACACTTAAAAAGTGAGATTGCAA----------------------------------ACAATGTCTCGGACCTAAAAATGC----T---TTTCAAGTG-CTGATG------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTTAACCATGATAATA----------------------------------ATAATCT-----------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 10:50 PM