ID:

dsi_29238

 Coordinate:

2r:21353430-21353579 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [2r_21353273_21353429_-]; CDS [2r_21353273_21353429_-]; intron [2r_21353430_21356992_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAAATGATCAACCTTAAGAATGGAAATACATTGGCGTAAGATTTTATCTGACGCGATTTTTTTTTATTACCTCATGTTTGCAATCATACTCCCAAATGAAGCCCTTTATTCATTATAAGCAAGCATTAAGTATACCTAACAATAAATCCTTCGACTGATGGGTTAAGTAAGACAAACACTAAACAATTTCTTTATTTCAGACATATTCCGGTCTTTTCTGCGTTGTGGTCAACCCGTACAAGAAACTACC
**************************************************.................(((...((((((((.............((((((........))))))....))))))))...)))............(((((.((....)).)))))....................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M025
embryo
 M024
male body		 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
...........................................TTATCAGACGCCACTTTTTTTTA........................................................................................................................................................................................ 23 3 5 6.00 30 30 0 0 0 0 0 0 0
..........................................................................................................................................................................................................ATATTCCGGTCTTTTCTGCGTT.......................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................ATACATATTCCGGTCTTTTCTGC............................. 23 1 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................TTTCTGCGTTGTGGTCAACC................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................ATTCCGGTCTTTTCTGCGT........................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................ATATTCCGGTCTTTTCTGC............................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................ATTCCGGTCTTTTCTGCGTTGTGGTC.................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................GTTGTGGTCAACCCGTACAAGAAACTAC. 28 0 1 1.00 1 0 0 0 1 0 0 0 0
...........................................TTATCAGACGCGACTTTTTTT.......................................................................................................................................................................................... 21 2 4 0.25 1 1 0 0 0 0 0 0 0
................................................................................................................................................................GGTTATGTAAGACAGA.......................................................................... 16 2 20 0.15 3 0 0 0 0 2 0 0 1
....................................................................................................................................................................AAGTAAGACAAATACT...................................................................... 16 1 14 0.07 1 0 0 0 0 0 1 0 0
........................AATATATAGGCGTAAGA................................................................................................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 1 0

Anti-sense strand reads

TTTTACTAGTTGGAATTCTTACCTTTATGTAACCGCATTCTAAAATAGACTGCGCTAAAAAAAAATAATGGAGTACAAACGTTAGTATGAGGGTTTACTTCGGGAAATAAGTAATATTCGTTCGTAATTCATATGGATTGTTATTTAGGAAGCTGACTACCCAATTCATTCTGTTTGTGATTTGTTAAAGAAATAAAGTCTGTATAAGGCCAGAAAAGACGCAACACCAGTTGGGCATGTTCTTTGATGG
**************************************************.................(((...((((((((.............((((((........))))))....))))))))...)))............(((((.((....)).)))))....................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR902009
testis
.......................................................................AGTCGAAACGTTGGTATGAGGG............................................................................................................................................................. 22 3 2 6.00 12 9 3 0 0 0 0 0 0 0
.......................................................................AGTCGAAACGTTGGTATGAGG.............................................................................................................................................................. 21 3 3 3.33 10 9 1 0 0 0 0 0 0 0
.......................................................................AGTAGAAACGTTGGTATGA................................................................................................................................................................ 19 2 2 2.00 4 0 0 3 1 0 0 0 0 0
............................................................................AAACGTTGGTATGAGG.............................................................................................................................................................. 16 1 3 1.67 5 3 1 0 0 0 1 0 0 0
.......................................................................AGTCGAAACGTTGGTATGAG............................................................................................................................................................... 20 3 5 1.60 8 4 3 0 0 0 1 0 0 0
.............................................................................AACGTTGGTATGAGG.............................................................................................................................................................. 15 1 5 0.80 4 2 2 0 0 0 0 0 0 0
.......................................................................AGTCCAAACGTTGGTATGAAGG............................................................................................................................................................. 22 3 2 0.50 1 0 0 0 1 0 0 0 0 0
............................................................................AAACGTTGGTATGAGGG............................................................................................................................................................. 17 1 2 0.50 1 1 0 0 0 0 0 0 0 0
............................................................................AAACGTTGGTATGAG............................................................................................................................................................... 15 1 6 0.50 3 3 0 0 0 0 0 0 0 0
........................................................................GTCGAAACGTTGGTATGAGGG............................................................................................................................................................. 21 3 4 0.50 2 2 0 0 0 0 0 0 0 0
........................................................................GTCCAAACGTTGGTATGAAGG............................................................................................................................................................. 21 3 2 0.50 1 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................................AGTTGGGCATATTCTT...... 16 1 3 0.33 1 0 0 0 0 0 0 1 0 0
.................................................................................................................................................TAGGAAGCTGACTAAC......................................................................................... 16 1 4 0.25 1 0 0 0 1 0 0 0 0 0
.......................................................................AGTCGAAACGTTAGTATGAAG.............................................................................................................................................................. 21 3 4 0.25 1 0 0 0 1 0 0 0 0 0
.......................................................................AGTCCAAACGTTGGTATG................................................................................................................................................................. 18 2 5 0.20 1 0 0 0 0 1 0 0 0 0
..............................................................................ACGTTGGTATGAGGG............................................................................................................................................................. 15 1 7 0.14 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................AAATAAAGTCTGTAGA............................................ 16 1 7 0.14 1 0 0 0 0 0 1 0 0 0
........................................................................GTAGAAACGTTGGTATGA................................................................................................................................................................ 18 2 8 0.13 1 0 0 1 0 0 0 0 0 0
........................................................................GTCGAAACGTTGGTATGAG............................................................................................................................................................... 19 3 19 0.05 1 0 0 0 0 0 0 0 1 0
..............................................AGACTGCGCTCAAACA............................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0
.................................................................................................................................................TAGGAAGCTGACTAACA........................................................................................ 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................AAGTCCGAATAAGGCCA...................................... 17 2 20 0.05 1 0 0 0 0 0 0 1 0 0
..........................................................................AGAAACGTAAGTATGAG............................................................................................................................................................... 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0
.........................................AAAATAGACTGCGGGATAA.............................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:21353380-21353629 - dsi_29238 AAAATGATCAACCTTAAGAATGGAAATACATTGGCGTAAGA-----TTTTATCTGACGCGATTT--------------------------------TTTTTTATTACCTCATGTTTGCAATCATACTCCCAAA--------------------------------TGA-----------------AG------------------------------------------------------CC-------CTTT-ATT----------------------------------------------------------------------------------------------------------CATTATAAGCAAGCATT---------AAGTATACCT---------------------------------------------------------------------------------------------AACAATAAATCCTTCGACTGATGGGTTAAGTAAGACAAACAC-TAAACA-A---TTTC------TTTATTTCAGACATATTCCGGTCTTTTCTGCGTTGTGGTCAACCCGTACAAGAAACTACC
droSec2 scaffold_23:746956-747205 - dse_1093 AAAATGATCAACCTTAAGAATGGAAATACATTGGCGTAAGA-----TTTTATCTGACTCGATTT--------------------------------TTTTTTATTACCTCATGTTTGCAATCATACTCCTAAA--------------------------------AGA-----------------AG------------------------------------------------------CC-------CTTC-ATT----------------------------------------------------------------------------------------------------------CATTATAAGCAAGCATT---------AAGTATACCT---------------------------------------------------------------------------------------------AACAATAAATCCCTTGATTGATGGGTTAAGTAAGACAAACAC-TGAACA-A---TTTC------TTTATTTCAGACATATTCCGGTCTTTTCTGTGTTGTGGTCAACCCGTACAAGAAACTACC
dm3 chr2R:20889918-20890133 - AAAATTATCAACTTTAAGAATGGGAATACATTGGTGTAAGA-----T--TATCCGACGCGATTT--------------------------------ATTAATATTACCTCATGTTTTGAATCATACTCCTAAA----------------------------------------------------AG------------------------------------------------------CC-------CTTC-ATT----------------------------------------------------------------------------------------------------------C---------AAGCATT---------AAGTATACCT---------------------------------------------------------------------------------------------AACAATAAATCCCTCGATTGATGG---------------------AACA-A---TTTC------TTCATTTCAGACATATTCCGGTCTTTTCTGTGTTGTGGTCAACCCGTACAAGAAACTTCC
droEre2 scaffold_4845:22264795-22265077 - AAAATAATCAACCTTAAGAACGGGAATGCGTGGACGTAAGA-----TTTTATCTGACGTG---------------------------TCAAACATTAATCTCACTACTTCAAGTCAGGAATCATAGTCCCAAAATCCTAATCATAGTCATAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGCAAACAGTCTAAAGTGTTAGTTTACCTCAAGCCAACATG---------------------------------------------------------------------------------AACTACAAATGACTCAATTGATGAATTGCATAAGACCAATAG-TAAAAC-A---TCTCCTCACATCCATTTCAGACATATTCCGGTCTCTTCTGCGTTGTGGTCAACCCGTACAAGAAACTGCC
droYak3 2R:20854416-20854653 - ATAATGATCAACCTTAAGAATGGAAATACATGGAAGTAAGA-----TTTTATCTAACTAGGTTT--------------AAAAAAGTGTCAAACAT-------------------------------------------------TC---------ATCATCA--------------------------------------------------------------------------------------------------------------ACA-----------------------------------------------------------------------------------CACATTGATTATAAGCAAACAATCTAAACTATTGGTAAACCTAAGGCCAACATGAACAATACTAAACAT-----------------------------------------------------------------G---------------------------------AACTTACAC-TAAAAC-A---TTTC------CTAATTGCAGACATATTCCGGTCTTTTCTGCGTTGTGGTCAACCCGTACAAGAAACTACC
droEug1 scf7180000409464:1433103-1433347 + AAAATGACCAACCATAAGCTCCGTAAATCATGCAAGTAAGATATGCCTCTATAG-ATC--TCTCAGTAGCAGA-TACCCT------------------------------------------------------------------------------------------------------ATATA-------------------------------------------------------C-------CTGTGATT------------------------------------------------------CAAACAAAGCGGAGC----------CAAATCCAAAAAT----------------------------------------C----------------------CGCAAACTT-----------ACATTT--------------------TTAAATATTCGTATTTT---ATGAATTTAACTAA---------------------------------TTCTCTGGGCTT-ACC-C---TCTT------TTATTTACAGACATATTCCGGTCTTTTCTGCGTTGTGGTCAATCCCTACAAGAAACTACC
droBia1 scf7180000301754:5863423-5863643 - AAAATGATCAGCCTTAGGCCTGGAAAATCAAA-GAGTAAGG-----TCCTAGCGGG--------------AAACTATCCT------------------------------------------------------------------------------------------------------TTATGTATGCCAGTTAAGCCTAGTTAGCCTTAGATAACCTCTTCAAATCTTAAACCAA--------------------------------------------TCCATA---------------------------------------------GC----------------------------------------------------------------------------------------------------------------------------------------------ATAATATAAGCCGG---------------------------------GACTGATATTTGAAAC-A---TTTC------CTTCTTTCAGACATATTCCGGTCTCTTCTGCGTTGTGGTCAACCCGTACAAGAAACTGCC
droTak1 scf7180000415805:321346-321555 + AAAATGATCCACCTTAGGCCTGGAAAATCATTTAAGTAAGA-----TTTTATAGGG--------------AA---------------------------------------------------------------------------------------------------------TCTAA------------------------------------------ACT-------------GTCCTTAAAAA----------------TACCACTTCATAAATGA---------------------TAATTATAA------GTTAGACTCCTGATTGT----------------------------------------------------------------------------------------------------------------------------------------------ATGAAATAAACCGA---------------------------------TACTAATATCTAAACC-A---TTCC------CTTCTTTCAGACATATTCCGGTCTTTTCTGCGTTGTGGTCAATCCGTACAAGAAACTACC
droEle1 scf7180000491107:292582-292800 + AAAATCATCAAAT---------------------------------------------------------------------------------------------------------------GGTTCTAATGTCCTTAATATGTATATGTATATGCAGAGAAGTTTGGAGTAGGTTCTCT------------------------------------------ACTA----TGACT---------GTAGATTTG-GCTTTGTTGTTT-C------------AG---------------------GAATCCTAA------GCTAACCCCTTATTTGT----------------------------------------------------------------------------------------------------------------------------------------------TTAATA----CAAA---------------------------------GACTTATATTATAA---A---CTTT------ATTCTTTTAGACATATTCCGGTCTATTCTGCGTTGTGGTCAATCCGTACAAGAAACTTCC
droRho1 scf7180000778233:29213-29504 - AAAATGATTGATTTGAGGCCTGAAAAATCATCGATG--AGA-----TTTTGTCG-ACT--ATTTGGTAAT-GT-TGTTCT-------------------------------------------------TAATGTCCCTAATATGG---------AGCAGCCAAATTAAGCGTGGAGTCTCT------------------------------------------GCAA----TAAATCAA--------------------------------------------ATCA-----------------AAATTATAA------GCCGA----------------------------------------CTTAAAGGCAAACATT---------G----------------------TGGAAACTTTAAAGGGATTTGCCTAT--------------------ATTAATATTCGATTTTTTGTTTTAAGTAA----A---------------------------------GAGAAACTA-ATAACA-------AT------TATTTTTCAGACATATTCCGGTCTATTCTGCGTTGTGGTCAATCCGTACAAGAAACTTCC
droFic1 scf7180000453858:603314-603573 + TTAG----CAAACCTAAGAAGCA-TACAAAATGGTTTA-----------TATTCAAGTCAAATT--------------------------------AGGCATTTTACATCTTATT-ACAATCTTTGTGC-----------------------------------------------------AT-A------------------------------------------------------GTC-------CTTTG-AT---------CACCACCACG---------------------------------ATCAAACAA----TA----------GTAAAAGAAAAACAT----------------------------------------G----------------------TGGAAACTT-----------TGGGGTTTGTACATTTGTAAATGAAG--------------------TGAAAACCAGCCGA---------------------------------GAATAATATTCAAAAC-T---CTTC------CTTCTTTCAGACATATTCCGGTCTTTTCTGCGTCGTGGTCAATCCGTACAAGAAACTACC
droKik1 scf7180000302366:1036933-1037205 - ATCATGATCTACCTGGCAAGGGGATTTCCTTTAAAGTAAGA-----CCACCAAT-G--------------ACACTATCCT------------------------------------------------------------------------------------------------------TG--------------------------------------------------------ATC-------TTTTG-ACTCTACTATTTACCATCACC---------------------------------TTTA------GCGAACC----------ATAATCCAAATATATGTTTCATATATTTATTATATTCATTTAAG---ATCTTTTTACCAATTTAATAACATTAGTCTTAATACCAAGTAA-----------------------------------------------------------------A---------------------------------AACTGATTACTAAACG-TA-TGCCT------TTTCTTTCAGACATATTCCGGTCTCTTCTGCGTTGTGGTTAATCCCTACAAGAAGCTGCC
droAna3 scaffold_13266:12182909-12182964 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAGACATATTCCGGCCTCTTCTGCGTCGTGGTCAACCCCTACAAGAAGCTGCC
droBip1 scf7180000396547:297439-297502 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTC------TTCCTTCCAGACATATTCCGGCCTCTTCTGCGTGGTGGTCAATCCCTACAAGAAGCTGCC
dp5 3:2006091-2006157 - T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---TTTT------ACTTTTCCAGACATATTCCGGTCTATTTTGCGTTGTGGTCAATCCGTACAAGAAACTCCC
droPer2 scaffold_2:2178445-2178511 - T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---TTTT------ACTTTTCCAGACATATTCCGGTCTATTTTGCGTTGTGGTCAATCCGTACAAGAAACTCCC
droWil2 scf2_1100000004510:1920487-1920580 - AAACA----AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTACCATGAAATATGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---TAAT------ATAATTTCAGACATATTCCGGTCTTTTCTGCGTTGTGGTTAATCCCTATAAGAAATTGCC
droVir3 scaffold_12875:17147440-17147508 + AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-A---TCTT------TTTGTTTTAGACATATTCCGGTCTCTTCTGCGTTGTGGTCAATCCCTACAAGAAATTGCC
droMoj3 scaffold_6496:10855381-10855449 - T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-TTTTAT------TCTTCTTCAGACATATTCCGGTCTTTTCTGCGTTGTGGTCAATCCCTACAAGAAATTGCC
droGri2 scaffold_15245:16676647-16676730 + AATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTA---------------------------------------------------------------------------------------------ATCTACACATTCTTTGA-----------------------------------------------CCATTTACAGACATATTCCGGTCTTTTCTGCGTTGTGGTCAATCCCTATAAGAAATTGCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAAATGATCAACCTTAAGAATGGAAATACATTGGCGTAAGA-----TTTTATCTGACGCGATTT--------------------------------TTTTTTATTACCTCATGTTTGCAATCATACTCCCAAA--------------------------------TGA-----------------AG------------------------------------------------------CC-------CTTT-ATT----------------------------------------------------------------------------------------------------------CATTATAAGCAAGCATT---------AAGTATACCT---------------------------------------------------------------------------------------------AACAATAAATCCTTCGACTGATGGGTTAAGTAAGACAAACAC-TAAACA-A---TTTC------TTTATTTCAGACATATTCCGGTCTTTTCTGCGTTGTGGTCAACCCGTACAAGAAACTACCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCCGGTCTTTTCTGCGTT..........................2211.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGCGTTGTGGTCAACC................2011.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGGTCTTTTCTGCGT...........................1911.00100100000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCCGGTCTTTTCTGC.............................1911.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGGTCTTTTCTGCGTTGTGGTC....................2611.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGGTCAACCCGTACAAGAAACTAC.2811.00100010000000000000
droSec2
AAAATGATCAACCTTAAGAATGGAAATACATTGGCGTAAGA-----TTTTATCTGACTCGATTT--------------------------------TTTTTTATTACCTCATGTTTGCAATCATACTCCTAAA--------------------------------AGA-----------------AG------------------------------------------------------CC-------CTTC-ATT----------------------------------------------------------------------------------------------------------CATTATAAGCAAGCATT---------AAGTATACCT---------------------------------------------------------------------------------------------AACAATAAATCCCTTGATTGATGGGTTAAGTAAGACAAACAC-TGAACA-A---TTTC------TTTATTTCAGACATATTCCGGTCTTTTCTGTGTTGTGGTCAACCCGTACAAGAAACTACCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCTTTTCTGTGTTGTGGTC....................2111.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGGTCTTTTCTGTGTTGTG.......................2311.0010010
................................................................................................................................CTAAA--------------------------------AGA-----------------AG------------------------------------------------------CC-------CTTC-ATT----------------------------------------------------------------------------------------------------------CATT.........................................................................................................................................................................................................................................................2311.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTGGTCAACCCGTAC...........1911.0010010
dm3
AAAATTATCAACTTTAAGAATGGGAATACATTGGTGTAAGA-----T--TATCCGACGCGATTT--------------------------------ATTAATATTACCTCATGTTTTGAATCATACTCCTAAA----------------------------------------------------AG------------------------------------------------------CC-------CTTC-ATT----------------------------------------------------------------------------------------------------------C---------AAGCATT---------AAGTATACCT---------------------------------------------------------------------------------------------AACAATAAATCCCTCGATTGATGG---------------------AACA-A---TTTC------TTCATTTCAGACATATTCCGGTCTTTTCTGTGTTGTGGTCAACCCGTACAAGAAACTTCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG---------------------AACA-A---TTTC------TTCATTTCAG..................................................221552.00552000000000000000000000000000000000000000000000000000000000306210360000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG---------------------AACA-A---TTTC------TTCATTTC....................................................20152.0052000000000000000000000000000000000000000000000000000000000291940000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG---------------------AACA-A---TTTC------TTCATTTCA...................................................21129.0029000000000000000000000000000000000000000000000000000000000161120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG---------------------AACA-A---TTTC------TTCATTTCAGA.................................................23127.002700000000000000000000000000000000000000000000000000000000014850000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGGTCTTTTCTGTGTTGTGGT.....................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------AACA-A---TTTC------TTCATTTCAG..................................................2012.0020000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG---------------------AACA-A---TTTC------TTCATTT.....................................................1912.0020000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG---------------------AACA-A---TTTC------TTCATT......................................................1812.0020000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AAGA-----T--TATCCGACGCGATTT--------------------------------A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGTCTTTTCTGTGTTGTGGTCAACCC...............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGTTGTGGTCAACCCGTAC...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCTGTGTTGTGGTCAAC.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGGTCTTTTCTGTGTT..........................1911.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AGAATGGGAATACATTGGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCTTTTCTGTGTTGTGG......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCCGGTCTTTTCTGTGTTGTGGTC....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGGTCTTTTCTGTGTTGT........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTCTTTTCTGTGTTGTGG......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATATTCCGGTCTTTTCTGTGTTG.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGGTCTTTTCTGTGTTGTG.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------AACA-A---TTTC------TTCATTTCAGA.................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGTCTTTTCTGTGTTGTGGTCA...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATATTCCGGTCTTTTCTGT.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGGTCTTTTCTGTGT...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTTTCTGTGTTGTGG......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCCGGTCTTTTCTGTGTTGTG.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCAACCCGTACAAGAAACTTCC2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG---------------------AACA-A---TTTC------TTCATTTCAGAC................................................2411.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ATACATTGGTGTAAGA-----T--TATCCGACGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGGTCTTTTCTGTGTTG.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTCTTTTCTGTGTTGTGGTC....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCTTTTCTGTGTTGTGGT.....................2011.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGACATATTCCGGTCT....................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCCGGTCTTTTCTGTGTTGTG.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCAACCCGTACAAGAAACT...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATTCCGGTCTTTTCTGTGTT..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................AA----------------------------------------------------AG------------------------------------------------------CC-------CTTC-ATT----------------------------------------------------------------------------------------------------------C---------AAGCATT---------...................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTTGTGGTCAACCCGTAC...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AGAATGGGAATACATTGGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGTGGTCAACCCGTACAA.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AAAATAATCAACCTTAAGAACGGGAATGCGTGGACGTAAGA-----TTTTATCTGACGTG---------------------------TCAAACATTAATCTCACTACTTCAAGTCAGGAATCATAGTCCCAAAATCCTAATCATAGTCATAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGCAAACAGTCTAAAGTGTTAGTTTACCTCAAGCCAACATG---------------------------------------------------------------------------------AACTACAAATGACTCAATTGATGAATTGCATAAGACCAATAG-TAAAAC-A---TCTCCTCACATCCATTTCAGACATATTCCGGTCTCTTCTGCGTTGTGGTCAACCCGTACAAGAAACTGCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCCGGTCTCTTCTGCGT...........................2111.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGGTCTCTTCTGCGT...........................1811.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCCGTACAAGAAACTGCC2111.0010100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTTCTGCGTTGTGGT.....................1911.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTCAACCCGTACAAGAAACTGCC2611.0011000000
droYak3
ATAATGATCAACCTTAAGAATGGAAATACATGGAAGTAAGA-----TTTTATCTAACTAGGTTT--------------AAAAAAGTGTCAAACAT-------------------------------------------------TC---------ATCATCA--------------------------------------------------------------------------------------------------------------ACA-----------------------------------------------------------------------------------CACATTGATTATAAGCAAACAATCTAAACTATTGGTAAACCTAAGGCCAACATGAACAATACTAAACAT-----------------------------------------------------------------G---------------------------------AACTTACAC-TAAAAC-A---TTTC------CTAATTGCAGACATATTCCGGTCTTTTCTGCGTTGTGGTCAACCCGTACAAGAAACTACCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTCTGCGTTGTGGTCAAC.................2111.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATTCCGGTCTTTTCTGCGTTGT........................2511.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTTGTGGTCAACCCGT.............1911.00100010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGGTCTTTTCTGCGTTGT........................2211.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGCGTTGTGGTCAACC................2011.00110000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATTCCGGTCTTTTCTGCGTTGTGGT.....................2811.00101000000000
.....................GGAAATACATGGAAGTAAGA-----TTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTCTGCGTTGTGGTCAACCC...............2311.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTTGTGGTCAACCCGTACAAG........2411.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCCGGTCTTTTCTGCGTTGT........................2411.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGTCTTTTCTGCGTTGT........................2011.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCCGGTCTTTTCTGCGTTGT........................2311.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCTGCGTTGTGGTCAAC.................2011.00100000010000
droEug1
AAAATGACCAACCATAAGCTCCGTAAATCATGCAAGTAAGATATGCCTCTATAG-ATC--TCTCAGTAGCAGA-TACCCT------------------------------------------------------------------------------------------------------ATATA-------------------------------------------------------C-------CTGTGATT------------------------------------------------------CAAACAAAGCGGAGC----------CAAATCCAAAAAT----------------------------------------C----------------------CGCAAACTT-----------ACATTT--------------------TTAAATATTCGTATTTT---ATGAATTTAACTAA---------------------------------TTCTCTGGGCTT-ACC-C---TCTT------TTATTTACAGACATATTCCGGTCTTTTCTGCGTTGTGGTCAATCCCTACAAGAAACTACCSizeHit CountTotal NormTotal
No Reads
droBia1
AAAATGATCAGCCTTAGGCCTGGAAAATCAAA-GAGTAAGG-----TCCTAGCGGG--------------AAACTATCCT------------------------------------------------------------------------------------------------------TTATGTATGCCAGTTAAGCCTAGTTAGCCTTAGATAACCTCTTCAAATCTTAAACCAA--------------------------------------------TCCATA---------------------------------------------GC----------------------------------------------------------------------------------------------------------------------------------------------ATAATATAAGCCGG---------------------------------GACTGATATTTGAAAC-A---TTTC------CTTCTTTCAGACATATTCCGGTCTCTTCTGCGTTGTGGTCAACCCGTACAAGAAACTGCCSizeHit CountTotal NormTotal
No Reads
droTak1
AAAATGATCCACCTTAGGCCTGGAAAATCATTTAAGTAAGA-----TTTTATAGGG--------------AA---------------------------------------------------------------------------------------------------------TCTAA------------------------------------------ACT-------------GTCCTTAAAAA----------------TACCACTTCATAAATGA---------------------TAATTATAA------GTTAGACTCCTGATTGT----------------------------------------------------------------------------------------------------------------------------------------------ATGAAATAAACCGA---------------------------------TACTAATATCTAAACC-A---TTCC------CTTCTTTCAGACATATTCCGGTCTTTTCTGCGTTGTGGTCAATCCGTACAAGAAACTACCSizeHit CountTotal NormTotal
No Reads
droEle1
AAAATCATCAAAT---------------------------------------------------------------------------------------------------------------GGTTCTAATGTCCTTAATATGTATATGTATATGCAGAGAAGTTTGGAGTAGGTTCTCT------------------------------------------ACTA----TGACT---------GTAGATTTG-GCTTTGTTGTTT-C------------AG---------------------GAATCCTAA------GCTAACCCCTTATTTGT----------------------------------------------------------------------------------------------------------------------------------------------TTAATA----CAAA---------------------------------GACTTATATTATAA---A---CTTT------ATTCTTTTAGACATATTCCGGTCTATTCTGCGTTGTGGTCAATCCGTACAAGAAACTTCCSizeHit CountTotal NormTotal
No Reads
droRho1
AAAATGATTGATTTGAGGCCTGAAAAATCATCGATG--AGA-----TTTTGTCG-ACT--ATTTGGTAAT-GT-TGTTCT-------------------------------------------------TAATGTCCCTAATATGG---------AGCAGCCAAATTAAGCGTGGAGTCTCT------------------------------------------GCAA----TAAATCAA--------------------------------------------ATCA-----------------AAATTATAA------GCCGA----------------------------------------CTTAAAGGCAAACATT---------G----------------------TGGAAACTTTAAAGGGATTTGCCTAT--------------------ATTAATATTCGATTTTTTGTTTTAAGTAA----A---------------------------------GAGAAACTA-ATAACA-------AT------TATTTTTCAGACATATTCCGGTCTATTCTGCGTTGTGGTCAATCCGTACAAGAAACTTCCSizeHit CountTotal NormTotal
No Reads
droFic1
TTAG----CAAACCTAAGAAGCA-TACAAAATGGTTTA-----------TATTCAAGTCAAATT--------------------------------AGGCATTTTACATCTTATT-ACAATCTTTGTGC-----------------------------------------------------AT-A------------------------------------------------------GTC-------CTTTG-AT---------CACCACCACG---------------------------------ATCAAACAA----TA----------GTAAAAGAAAAACAT----------------------------------------G----------------------TGGAAACTT-----------TGGGGTTTGTACATTTGTAAATGAAG--------------------TGAAAACCAGCCGA---------------------------------GAATAATATTCAAAAC-T---CTTC------CTTCTTTCAGACATATTCCGGTCTTTTCTGCGTCGTGGTCAATCCGTACAAGAAACTACCSizeHit CountTotal NormTotal
No Reads
droKik1
ATCATGATCTACCTGGCAAGGGGATTTCCTTTAAAGTAAGA-----CCACCAAT-G--------------ACACTATCCT------------------------------------------------------------------------------------------------------TG--------------------------------------------------------ATC-------TTTTG-ACTCTACTATTTACCATCACC---------------------------------TTTA------GCGAACC----------ATAATCCAAATATATGTTTCATATATTTATTATATTCATTTAAG---ATCTTTTTACCAATTTAATAACATTAGTCTTAATACCAAGTAA-----------------------------------------------------------------A---------------------------------AACTGATTACTAAACG-TA-TGCCT------TTTCTTTCAGACATATTCCGGTCTCTTCTGCGTTGTGGTTAATCCCTACAAGAAGCTGCCSizeHit CountTotal NormTotal
No Reads
droAna3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAGACATATTCCGGCCTCTTCTGCGTCGTGGTCAACCCCTACAAGAAGCTGCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTCGTGGTCAACCCCTACAAG........2511.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGTCAACCCCTACAAGAA......2111.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGGCCTCTTCTGCGT...........................1911.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCCTACAAGAAGCTGCC1911.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTCTTCTGCGTCGTGGTCA...................2211.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTCGTGGTCAACCCCTACAAGAAGC....2911.001100000
droBip1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTC------TTCCTTCCAGACATATTCCGGCCTCTTCTGCGTGGTGGTCAATCCCTACAAGAAGCTGCCSizeHit CountTotal NormTotal
No Reads
dp5
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---TTTT------ACTTTTCCAGACATATTCCGGTCTATTTTGCGTTGTGGTCAATCCGTACAAGAAACTCCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCCGGTCTATTTTGCGTTGT........................2413.0030300000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGTCTATTTTGCGTTGTGGTCA...................2511.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGTTGTGGTCAATCCGT.............2011.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCCGGTCTATTTTGC.............................1911.0010000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCCGGTCTATTTTGCGTTGTGGTC....................2711.0010000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGCGTTGTGGTCAATC................1911.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAATCCGTACAAGAAACT...2011.0010000000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATTCCGGTCTATTTTGCGTTGT........................2511.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCGTACAAGAAACTCCC2011.0010010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCCGTACAAGAAACTCCC2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGTCTATTTTGCGTTGTG.......................2011.0010100000000
droPer2
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---TTTT------ACTTTTCCAGACATATTCCGGTCTATTTTGCGTTGTGGTCAATCCGTACAAGAAACTCCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTTTGCGTTGTGGTC....................1812.002200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCCGGTCTATTTTGCGTTGT........................2411.001010000
droWil2
AAACA----AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTACCATGAAATATGATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---TAAT------ATAATTTCAGACATATTCCGGTCTTTTCTGCGTTGTGGTTAATCCCTATAAGAAATTGCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATTCCGGTCTTTTCTGCGTTGTG.......................2612.00200110
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGTCTTTTCTGCGTTGTGGTTAA..................2611.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTTGTGGTTAATCCCT.............2011.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTTGTGGTTAATCCCTATAAG........2511.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGTTGTGGTTAATCCCT.............2111.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTCTGCGTTGTGGTTAA..................2011.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGTCTTTTCTGCGTTGTG.......................2011.00100100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATTCCGGTCTTTTCTGCGTTGT........................2511.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTCTGCGTTGTGGTTAATCCCTA............2611.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCCGGTCTTTTCTGCGTTGT........................2311.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGTTGTGGTTAATCCC..............2011.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGCGTTGTGGTTAATCCCTATAA.........2611.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAATCCCTATAAGAAATTGCC2311.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCCTATAAGAAATTGCC2011.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGGTCTTTTCTGCGTTGTG.......................2311.00100010
droVir3
AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-A---TCTT------TTTGTTTTAGACATATTCCGGTCTCTTCTGCGTTGTGGTCAATCCCTACAAGAAATTGCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCTCTTCTGCGTTGTGGT.....................2013.003000000000000000000000000000000000000000000000000000000000000003
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGTCTCTTCTGCGTTGTGGTC....................2313.003000000000000000000000000000000000000000000000000000000000000003
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATTCCGGTCTCTTCTGC.............................2012.002000100000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTCTCTTCTGCGTTGT........................1811.001000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGGTCTCTTCTGCGTTGTGGG.....................2411.001010000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGGTCTCTTCTGCGTTGTGGT.....................2411.001010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGTTGTGGTCAATCCCTACAAGA.......2711.001000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTCTGCGTTGTGGTCAATCCCTACA..........2811.001000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGTCTCTTCTGCGTTGTGGT.....................2311.001000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTTGTGGTCAATCCCTA............2111.001000001000000000000000000000000000000000000000000000000000000000
droMoj3
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-TTTTAT------TCTTCTTCAGACATATTCCGGTCTTTTCTGCGTTGTGGTCAATCCCTACAAGAAATTGCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTTGTGGTCAATCCCTACAA.........2411.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTTGTGGTCAATCCCTAC...........2211.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGCGTTGTGGTCAATCCCTACAAG........2711.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTCTGCGTTGTGGTCAATCCCTA............2611.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGCGTTGTGGTCAATCCCTACAA.........2611.001000001
droGri2
AATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTA---------------------------------------------------------------------------------------------ATCTACACATTCTTTGA-----------------------------------------------CCATTTACAGACATATTCCGGTCTTTTCTGCGTTGTGGTCAATCCCTATAAGAAATTGCCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 08:28 PM