ID:

dsi_29226

 Coordinate:

3r:26311970-26312145 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [3r_26312146_26312268_-]; CDS [3r_26312146_26312268_-]; exon [3r_26311811_26311969_-]; CDS [3r_26311811_26311969_-]; intron [3r_26311970_26312145_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGGGCGCGGGCTCTCTGCGATAATTGGATTCGCGCCGACCGATTCCTCAGGTAAGGCTCAACAAATATGCATTTGCATTTGCCCCGCTAATTAAAAGCAACCAGAACGCCGATGGGGATTGGCTAAATGGATGCTGTTCGGGCATGGGCATCCTTCCCCAGCTAATTAGCTGAGGATTGCGATAAAAGGACTGTCCCACTGAAAGTACATATTCCTCATTTCGCAGGAACTTTGCCGCCGACCTGCCACTGTGCCCCTGCACCTTGGACCAGGCTG
**************************************************...(((..........((((....)))).(((((.(((.......((((.(((....((((((....))))))....))).)))).....)))..))))).)))(((.(((((....))))).)))((((((....((((.(((...(((...)))..))).))))....))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 M053
female body
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
.............................................................................................................................................................................................................................CTCAGGAACTTTGCCGCCGACC................................. 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CATATTTCTCATTTGCCAGGA................................................ 21 3 9 2.89 26 0 21 0 0 0 2 0 3 0
...........TCTCTGCGATAATTGGATTCG.................................................................................................................................................................................................................................................... 21 0 1 2.00 2 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................ACATATTTCTCATTTGCCAGG................................................. 21 3 9 1.56 14 0 10 0 0 0 3 0 1 0
.............................................................................................................................................................................................................................CTCAGGAACTTTGCCGCC..................................... 18 1 2 1.50 3 2 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................TCCTCAGGAACTTTGCCGCC..................................... 20 2 3 1.33 4 2 0 2 0 0 0 0 0 0
......................ATTGGATTCGCGCCGACC............................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................................CACTGTGCCCCTGCACCTTGGAC....... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0
............CTCTGCGATAATTGGATT...................................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................ATTGGATTCGCGCCGACCG........................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............CTCTGCGATAATTGGATTC..................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................AACTTTGCCGCCGACCTGC.............................. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................................TTTGCTGCCGACCTGCCACT.......................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0
.......................TTGGATTCGCGCCGACCG........................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...............................................................................................................................TGGATTCTGTTCGGGTATCGG................................................................................................................................ 21 3 1 1.00 1 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................................................CTCAGGAACTTTGCCGCCGACCTGCCACT.......................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................CGATGGGGATTGGCTAAATA................................................................................................................................................... 20 1 1 1.00 1 0 0 0 0 1 0 0 0 0
............CTCTGCGATAATTGGATTCG.................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................GATAATTGGATTCGCGCCGACC............................................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TTCCTCAGGAACTTTGCCGCC..................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0
....................TAATTGGATTCGCGCCGACC............................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0
........................................................................................................................................................................................................................GATTCCTCAGGAACTTTGCCGCC..................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ACATATTTCTCATTTGCCAGGA................................................ 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TGCGCAGGAAAGTTGCCGCCGA................................... 22 3 3 0.33 1 0 1 0 0 0 0 0 0 0
......................................CAGATTCCTCAGGTAAAACT.......................................................................................................................................................................................................................... 20 3 3 0.33 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CATATTTCTCATTTGCCAGGAA............................................... 22 3 5 0.20 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................ATTGGCTGAAGATTGAGATA............................................................................................ 20 3 15 0.13 2 0 0 0 2 0 0 0 0 0
.......................TTCGATTCGCGCCGA.............................................................................................................................................................................................................................................. 15 1 9 0.11 1 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................TGAGGACTGCGATGTAAGG....................................................................................... 19 3 9 0.11 1 0 0 0 0 0 0 0 0 1
..............................................................................................................................................................................................................ACATATTTCTCATTTGCCAG.................................................. 20 3 20 0.05 1 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

ACCCGCGCCCGAGAGACGCTATTAACCTAAGCGCGGCTGGCTAAGGAGTCCATTCCGAGTTGTTTATACGTAAACGTAAACGGGGCGATTAATTTTCGTTGGTCTTGCGGCTACCCCTAACCGATTTACCTACGACAAGCCCGTACCCGTAGGAAGGGGTCGATTAATCGACTCCTAACGCTATTTTCCTGACAGGGTGACTTTCATGTATAAGGAGTAAAGCGTCCTTGAAACGGCGGCTGGACGGTGACACGGGGACGTGGAACCTGGTCCGAC
**************************************************...(((..........((((....)))).(((((.(((.......((((.(((....((((((....))))))....))).)))).....)))..))))).)))(((.(((((....))))).)))((((((....((((.(((...(((...)))..))).))))....))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
..............................................................................AACGGGGCGATTAAT....................................................................................................................................................................................... 15 0 2 0.50 1 1 0 0 0
........................................................................................................................................................................................................................................................GACATGGCGACATGGAACCT........ 20 3 11 0.18 2 0 2 0 0
...........................................................................................................................................................................................................................................................ACGGGGACGTGGCAGCTG....... 18 2 7 0.14 1 0 1 0 0
............................GAGCGCGGCTGGCTACG....................................................................................................................................................................................................................................... 17 2 8 0.13 1 0 1 0 0
.........................................................................................................................................................................................................................................CGACGGATGGACTGTGACA........................ 19 3 20 0.10 2 0 0 2 0
..............................................................................................................................................................................................................TGTATAAAGAGTAAACGGTC.................................................. 20 3 20 0.10 2 2 0 0 0
.......................................................................................................................................................................TCGACTCCTCGCGCTAATTT......................................................................................... 20 3 12 0.08 1 0 0 1 0
............................................................................................................................................................................................................................................CGGGTGGACTGTGACAGGG..................... 19 3 20 0.05 1 0 0 1 0
..............................................................................AAAGGGGCGATTAATTTA.................................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:26311920-26312195 - dsi_29226 TGGGCGCGGGCTCTCTGCGATAATTGGATTCGCGCCGACCGATTCCTCAGGTAAGGCTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATTT------------GCCCCGCTAATTAAAA--GC---AACC-AGAACGCCGATGGGG----A-TTGGCTAA--ATGGATGC---------T-------------------------------------G-------------------------TTCG-GGCATGGGCATCCTTCCCC-------------------------AGCTAA--TTAGCTGAGGATTGCG-ATAAA------AGGACTG---TCCC--AC---TGAAAGTACATA------------------------TTCCT-----CAT------TTCGCAGGAACTTTGCCGCCGACCTGCCACTGTGCCCCTGCACCTTGGACCAGGCTG
droSec2 scaffold_4:5826574-5826849 - TGGGCGCGGGCTCTCTGCGATAATTGGATTCGCGCCGACCGATTCCTCAGGTAAGGCTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATTT------------GCCCCGCTAATTAAAA--GC---AACC-AGAACGCCTATGGGG----A-TTGGCTAA--ATGGATGC---------T-------------------------------------G-------------------------TTCG-GGCATGGGCATCCTTCCCC-------------------------AGCTAA--TTAGCTGAGGATTGCG-ATAAA------AGGACTG---CCCC--AC---TGAAAGTACATA------------------------TTCCT-----CAT------TTCGCAGGAACTTTGCCGCCGACCTGCCACTGTGCCCCTGCACCTTGGACCAGGCTG
dm3 chr3R:27008446-27008721 - TGGGCGCGGGCTCTCTGCGATAATTGGATTCGCGCCGACCGATTCCTCAGGTAAGGCTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATTT------------GCCCCGCTAATTAAAA--GC---AACT-AGAACGCCGATGGGG----A-TTGGCTAA--ATGGATGC---------T-------------------------------------G-------------------------TTCG-GGCATGGGCATCCTTCCCC-------------------------AGCTAA--TTAGCTGAGGATTGCG-ATAAA------AGGACTG---CCCC--AC---TGAAAGTACATA------------------------TTCCT-----CAT------TTTGCAGGAACTTTGCGGCCGACCTGCCACTTTGCCCCTGCACCTTGGACCAGGCTG
droEre2 scaffold_4820:976327-976602 + TGGGCGCGAGCTCTCTGCGATAATTGGATTCGCGCCGACCGATTCCTCAGGTAAGGCTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATTT------------GGCCCGCTAATTAAAA--GC---AACC-AGAACGCCGTTGGGG----A-TTGGCTAA--CTGGATGC---------C-------------------------------------G-------------------------TTCG-GGCATGGGCATCCTTCCGC-------------------------AGCTAA--TTAGCTGAGCACTGCG-ATAAT------AGGACTG---CCCC--AC---TGAAAATACATA------------------------TATCT-----CGT------TTCGCAGGAACTTTGCCGCCGACCTTCCACTGTGCCCCTGCACCCTGGACCAGGCTG
droYak3 3R:27944237-27944519 - TGGGCGCGAGCTCTCTGCGATAATTGGATTCGCGCTGACCGATTCCTCAGGTAAGGCTCAAC----ACTCAACAAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATTT------------GGCCCGCTAATTAAAA--GC---GACC-AGAACGCCGATGGGG----A-TTGGCTAA--ATGGACGC---------T-------------------------------------C-------------------------TTCG-GGCATGGGCCGCCTTCCGC-------------------------AGCTAA--TTAGCTGAGGATTGCG-ATAAT------AGGACTG---GTCC--AT---TGAAAATACATA------------------------TACCT-----CGT------TTCGCAGGAACTTTGCCGCCGACCTGCCGCTGTGCCCCTGCACCCTGGACCAGGCTG
droEug1 scf7180000409166:24917-25192 + TGGGCGAGAGCTCTCTGCGATAATTGGATTCGTACCGACAGATTCCTCAGGTAAGGCTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATTG------------GCCCCGCTAATTAAAA--GC---AACC-AAAACGCCGATGGGG----A-TTGGAGAA--ATGGTTGC---------C-------------------------------------A-------------------------TGCG-GGCGTGGGCATCCTTCCCC-------------------------AGTTAA--TTAGTAGAGGATTGCT-ATAAA------GGGACTT---CCCA--GC---TAAAAAAGCATG------------------------CCTTT-----CCT------TTCACAGGAACTTTGCCGCCGACCTTCCTCTTTGCCCTTGCACTTTGGACCAGGCTG
droBia1 scf7180000302113:306112-306371 + TGGGCGAGAGCTCTCTGCGATAATTGGATTCGCGCCGACCGATTCCTCAGGTAAGGCTCAGC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATTTG------CATTTGGCCCGCTAATTAAAA--GC---AGCCGAAAACGCCGATGGGG----A-CTGGCCAA--ATGGAGGC---------T-------------------------------------G---------------------------------------------------------------------------GCTAA--TTAGCCGAGGATTGCA-ATAAA------GGGACTT---CCCA--GC--CTGAACATTCATA------------------------TTCCC-----CAT------TTCGCAGGAACTTTGCCGCCGACCTGCCCCTGTGCCCCTGCACCCTGGACCAGGCTG
droTak1 scf7180000415286:121200-121463 - TGGGCGAGAGCTCTCTGCGATAATTGGATTCGCGCCGACCGATTCCTCAGGTAAGGCTCAGC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATTT------------GGCCCGCTAATTAAAA--GC---AACCGAAAACGCCAACGGGG----A-TTGGCCAACGATGGATGCC--------CATA-----------------------------------------------------------------------------------T-------------------------AGCTAA--TTAGCCGAGGATTGCA-ATAAA------GGTACTCTT-CCCCCAAC---TGAAATTTCATA------------------------TTCTC-----CCT------TTCGCAGGAACTTTGCCGCCGACCTTCCACTCTGCCCCTGCACCTTGGACCAGGCTG
droEle1 scf7180000491194:1008105-1008356 - TGGGCGAGAGCTCTCTGCGATAATTGGATTCGCGCCGACCGATTCCTCAGGTAAGGCTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATGG------------GCCCCGCTAAATAAAA--GCCGAGACC-AAAATGCCAATGGGG---CATTTGGCGAA--ACGCCTGC---------T-------------------------------------A-------------------------TTTA-GGTTTGGG--------------------------------------------------------TGCA-ACGAG------GGTACTT---CCTT--TA---TTTTAATTCATA------------------------CTTCA-----ACT------TTTACAGGAACTTTGCCGCCGACTTGCCACTTTGTCCCTGCACTTTGGACCAGGCTG
droRho1 scf7180000777206:324538-324766 + TGGGCCAGAGCTCTCTGCGATAATTGGATTCGAGCGGACCGATTCCTCAGGTAAGGCTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------GTGCATTTGCGTTG------------G-CCCGCTAATTAAAA--GC---GACC-AGTTTGCCAATGGGG----A-TTGGCGAA--ATG----------------------------------------------------------------------------------------------------CC-------------------------TGCTAA--TTACCCTA-GATTGCA-AC-------------------------------TAAAATTCATA------------------------ATTCG-----CTT------TCAACAGGAACTTCGCCGCTGATTTGCCACTTTGTCCCTGCACTTTGGACCAGGCTG
droFic1 scf7180000453782:298403-298687 + TGGGCGAGAGCGCTCTGCGATAATTGGATCCGCGCCGACCGATTCCTCAGGTAAGGCCCAAC-----------AAAC-----------------------------------------------------------------------------------------------------------------------------------------------ATGCGTTTGCATTCGCATCCGCATTTGCCGCGCTAATTAAAA--GC---GGCC-AAAACGCCAGAGGGG----A-TTGGCGAA----GGGCGCC--------C-------------------------------------A-------------------------T--------TCGGCAGCCTTCCCC--------------------------GCTAA--TTAGCTTTGGATTGCG-ATAAA------GGGACTT---CCCA--CG---CTAACGCTCACT-----------------------GTTTCCACTCGCAT------TTCGCAGGAACTTTGCTGCTGACCTGCCCCTGTGCCCCTGCACCTTGGACCAGGCCG
droKik1 scf7180000301923:119782-120058 - TGGCCGCGAGCTCTCTGCGATAATTGGATTCGCAGCGACCGATTCCTCAGGTAAGACTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATTT------------GCCGCGCTAATTAAAA--GC---AACC-A-AACGCGAAGGGGA------------AA--TTGGACGCACACTCGGCCATACAGCC--T--GACCCTGCCTT------------------------------------------------------------------------------------------CTAA--TTAGCGCAGGATTGCA-ATAAA------GGGAATT-TGCCCT--GG---CTAAAATGTATG------------------------TTGC------CGTTTTGC-TTTACAGAAACTTTGCCGCCGATTTGCCCCTGTGTCCCTGCACCCTTGACCAGGCGG
droAna3 scaffold_13340:14393159-14393397 - TGGCCGCGGGCTCTTTGCGATAATTGGCTTCGCTCCGACCGATTCCTCAGGTAAGGCTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTCGCTTTT------------G--CTGCTAATTAAAA--GC---AACC-TGGCCGGCAC-----AACCA--------A---CGCAACC---------C--------GGT--TACCA--------------------------------------------------------GGC-----TCCCCAT--------------------------T-----------------------GAT------TGGAGTG---CCCT--TT---TTAAAAATCATA------------------------ATTTC-----CGT--TGA-TTTGCAGGAACTTTGCCGCCGACCTGCCGCTCTGCCCCTGCACCCTGGACCAGGCAG
droBip1 scf7180000395971:771970-772231 + TGGCCGCGGGCTCTTTGCGATAATTGGCTTCGCTCGGACCGATTCCTCAGGTAAGGCTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTCGCATTT------------G--CTGCTAATTAAAA--GC---AACC-AGGCTCGCAC-----AGCGA--------A---CGCAACT---------C--------GGTGTGTCCT--------------------------------------------------------GGC-----TCCCC-------------------------AA-TGA--TTGGCTT-----CGCA-GGAAAACTGCTGGGACTG---CCCT--TT---TTAAAAATCATA------------------------ATTTC-----CGT--TGC-TTTGCAGGAACTTTGCCGCTGACCTGCCCCTATGCCCCTGCACTCTGGACCAGGCTG
dp5 2:123750-124045 + TGGCCCCGAGCTCTCTGCGATAATTGGATACGCGCCGACCGATTCCTCAGGTAAGACATATATATCCCTCTAGGAGT-------------------------------------------------------------------------------------------------------GTA-----------------------------------GAATGCATTTGAAATT------------G--CCACTAATTAATGGGGC---TACC-G-AATGCCAA---------A-TTGG--AA--ATGGAAGC---------C---------------------GGTCTAATTAGAGGCAG-------------------------CGCGTGGCTTCGGCCT-----CGCTTTGTTTCGCGGGTTTTCATTTCAT--------------------------------------------------G----------AATTCACAT-TTCACATTGAAAACAA--CCTATTTCC-----C---------GTGCAGGAACTTTGCGGCGGATCTGCCATTGTGCCCCTGCACCCTGGACCAGGCCG
droPer2 scaffold_7:2915421-2915711 + TGGCCCCGAGCTCTCTGCGATAATTGGATACGCGCCGACCGATTCCTCAGGTAAGACATATATATCCCTCTAGAAGT-------------------------------------------------------------------------------------------------------GTA-----------------------------------GGATGCATTTGGAATT------------G--CCACTAATTAATGGGGC---TACC-G-AATGCCAA---------A-TTGG--AA--ATGGAAGC---------C---------------------GGTCTAATTAGAGGCAG-------------------------CGCGTGGCTTCGGCCT-----CGCTTTGTTTCGCGGGTTTTCATTTCAT--------------------------------------------------G----------AATTCACAT-TTCACATTGAAAACAA---------CC-----CA-------TTTCCAGGAACTTTGCGGCGGACCTGCCATTGTGCCCCTGCACCCTGGACCAGGCCG
droWil2 scf2_1100000004921:674597-674975 - dwi_2955 TGGCCCAGAGCTTTGTGCGATAATTGGATACGCAACGACCGATTCCTGAGGTAAGTTTCACA-----TAA----AATGAATGCCACGCCC----------------------------------------------------GCAGGTGAGTTGGTAGAGATGATGCCTGAGATGATTGTGAAGGAGGAGGAGACGGTGTGGAGTGGGCGGGTAGTGGGAGTGCATTTGCATTT------------T--GTGCTAATTAAAA--GC---TGCC-AAATTGCCAATGGGA----A-ATG-CGAA--CTGG------------------------C--CTGCTAGCTGTCTAATTAGAGA--GCTGGGGAAGACATACAGAAATCCAGCGG-------------------------------------------CAA--------------------------------------------------G----------AAACAACAACAACACACAGAAAACAAAACAAATTTCC-----ATTTTTGCAATTTTAGAAACTTTGCTGCTGACTTGCCGTTATGTCCTTGTACCTTGGACCAGGCGG
droVir3 scaffold_12855:1273572-1273852 + dvi_3395 TGGCCCCGTGCTCTATGCGATAATTGGATACGCGCAGACCGATTTCTCAGGTAAGTCGAAAG----CTTTAAACAAT----GGCAGACTC-------------TCCAGTTACCA-----------------GTTTTCATCTGGC-----------------------------------------------------------------------TGCGCCTGCATTTACATTT------------T--CTGCTAATTAAAA--GC---TGGC-A-AATGTCAAGGGAA------C---------------AC---------C-----------------GCG-CTTTTAATTAGACACAG-------------------------CTCT-GGCCAGGCCA--------------------------------------AA--TAATCAAA-----------------------------------------------ATAATA------------------------CAAAA-----ATT--TGT-AATTCAGAAACTTTGCTGCCGACCTGCCGTTGTGCCCCTGCACCCTGGAGCAGGCGG
droMoj3 scaffold_6540:27020138-27020372 + TGGCCTCGTGCTCTATGCGATAATTGGATACGGGCCGACAGATTTCTCAGGTATGTCATGGC-----------AAC-------------------------------------------------------------------------------------------------------------------------------------------------------TGCA-----------------GCTGCTCATTAAAA--GC---TG-----AACGAGTTTCGGG----A-G-----A---------GC---------T-------------------------------------G-------------------------TGCT-CTCATC-TCATCACATCTC-------------------------AGCTCAGTTTAGCTTCTGGCT-CAGGGAAAA------TTAC--------------------TAATCGAA-------------------------ATGT-----CAA------ATTGCAGAAACTTTGCCGCCGACCTGCCGCTGTGCCCCTGCACCCTGGAGCAGGCGG
droGri2 scaffold_14624:3864127-3864433 + TGGCCTCGTGCTCTATGCGATAATTGGATACGCGCCGACCGATTTCTCAGGTAAGTT-----------------AATGCTTGTCCCACCCCACACCCCGCAACTACAC------CCGCACACAGCCAGAGCGCTTC---GAGGC-----------------------------------------------------------------------AGCTCCTGCATTTACATTT------------T--GTGCTAATTAAAA--GC---TGCC-A-AATGTCAA-GGGA----A-TTCTCTTG--TTGCTGGC---------T----------------------GTCTAATTAGA--CAG-------------------------CTTTTGGCCCTG-------------------------------------------------------ACT-CGACCAAAA------T---------------AAT-CTAAATAATATG------------------------AAAT--------T--TGA-AATACAGAAACTTTGCTGCCGATTTGCCACTGTGCCCCTGCACCCTGGAGCAGGCTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGGGCGCGGGCTCTCTGCGATAATTGGATTCGCGCCGACCGATTCCTCAGGTAAGGCTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATTT------------GCCCCGCTAATTAAAA--GC---AACC-AGAACGCCGATGGGG----A-TTGGCTAA--ATGGATGC---------T-------------------------------------G-------------------------TTCG-GGCATGGGCATCCTTCCCC-------------------------AGCTAA--TTAGCTGAGGATTGCG-ATAAA------AGGACTG---TCCC--AC---TGAAAGTACATA------------------------TTCCT-----CAT------TTCGCAGGAACTTTGCCGCCGACCTGCCACTGTGCCCCTGCACCTTGGACCAGGCTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........TCTCTGCGATAATTGGATTCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00201100000000000000
......................ATTGGATTCGCGCCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGTGCCCCTGCACCTTGGAC.......2311.00101000000000000000
............CTCTGCGATAATTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
......................ATTGGATTCGCGCCGACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
............CTCTGCGATAATTGGATTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTGCCGCCGACCTGC..............................1911.00100000000000100000
.......................TTGGATTCGCGCCGACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
.........................................................................................................................................................................................................................................................................................CGATGGGG----A-TTGGCTAA--ATA........................................................................................................................................................................................................................................................................................................2011.00100000000000100000
............CTCTGCGATAATTGGATTCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
..................GATAATTGGATTCGCGCCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
....................TAATTGGATTCGCGCCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
droSec2
TGGGCGCGGGCTCTCTGCGATAATTGGATTCGCGCCGACCGATTCCTCAGGTAAGGCTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATTT------------GCCCCGCTAATTAAAA--GC---AACC-AGAACGCCTATGGGG----A-TTGGCTAA--ATGGATGC---------T-------------------------------------G-------------------------TTCG-GGCATGGGCATCCTTCCCC-------------------------AGCTAA--TTAGCTGAGGATTGCG-ATAAA------AGGACTG---CCCC--AC---TGAAAGTACATA------------------------TTCCT-----CAT------TTCGCAGGAACTTTGCCGCCGACCTGCCACTGTGCCCCTGCACCTTGGACCAGGCTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............CTCTGCGATAATTGGATTCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.....................AATTGGATTCGCGCCGACCGATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCCGACCTGCCACTGTGC......................2211.0010010
....................TAATTGGATTCGCGCCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
...................ATAATTGGATTCGCGCCGACCGATTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
........................TGGATTCGCGCCGACCGATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..................GATAATTGGATTCGCGCCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGCCGCCGACCTGCCACTG.........................2311.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................A--TTAGCTGAGGATTGCG-ATAAA------AGG..................................................................................................................................2511.0010100
......................ATTGGATTCGCGCCGACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.......GGGCTCTCTGCGATAATTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
...................ATAATTGGATTCGCGCCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...................ATAATTGGATTCGCGCCGACCGATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
dm3
TGGGCGCGGGCTCTCTGCGATAATTGGATTCGCGCCGACCGATTCCTCAGGTAAGGCTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATTT------------GCCCCGCTAATTAAAA--GC---AACT-AGAACGCCGATGGGG----A-TTGGCTAA--ATGGATGC---------T-------------------------------------G-------------------------TTCG-GGCATGGGCATCCTTCCCC-------------------------AGCTAA--TTAGCTGAGGATTGCG-ATAAA------AGGACTG---CCCC--AC---TGAAAGTACATA------------------------TTCCT-----CAT------TTTGCAGGAACTTTGCGGCCGACCTGCCACTTTGCCCCTGCACCTTGGACCAGGCTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................TCAGGTAAGGCTCAAC-----------AAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CGATAATTGGATTCGCGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................TAATTGGATTCGCGCCGACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................A-TTGGCTAA--ATGGATGC---------T-------------------------------------G-------------------------TTCG-GGC..................................................................................................................................................................................................................2611.0010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TAATTGGATTCGCGCCGACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTGGATTCGCGCCGACCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GATAATTGGATTCGCGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................AACT-AGAACGCCGATGGGG----A-TTGGC................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..................GATAATTGGATTCGCGCCGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CTCTGCGATAATTGGATTCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................AATTGGATTCGCGCCGACCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............................................................................................................................................................................................................................................................................................TGGGG----A-TTGGCTAA--ATGGATGC---------T-------------------------------------....................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.........................................................................................................................................................................................................................................................................C---AACT-AGAACGCCGATGGGG----A-TTGGC................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTGCCACTTTGCCCCTGCACCTT...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CGCGCCGACCGATTCCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CGCGCCGACCGATTCCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CGCGCCGACCGATTCCTCAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CTGCGATAATTGGATTCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGGATTGCG-ATAAA------AGGAC................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................GGATTCGCGCCGACCGATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTG---CCCC--AC---TGAAAGT.........................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTGCCACTTTGCCCCTG.................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCTGCACCTTGGACCA.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGACCTGCCACTTTGC......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGGATTCGCGCCGACCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................TTCGCGCCGACCGATTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGCGGCCGACCTGCCA............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACTTTGCCCCTGCACCTTG..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTGGATTCGCGCCGACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AATTGGATTCGCGCCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CGGGCTCTCTGCGATAATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CGATAATTGGATTCGCGCCGACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.....................AATTGGATTCGCGCCGACCGATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........GGCTCTCTGCGATAATTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AATTGGATTCGCGCCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA--TTAGCTGAGGATTGC..................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGGGCGCGGGCTCTCTGCGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................AGAACGCCGATGGGG----A-TTGAG................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
............CTCTGCGATAATTGGATTCGCGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTGGATTCGCGCCGACCGATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TGGGCGCGAGCTCTCTGCGATAATTGGATTCGCGCCGACCGATTCCTCAGGTAAGGCTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATTT------------GGCCCGCTAATTAAAA--GC---AACC-AGAACGCCGTTGGGG----A-TTGGCTAA--CTGGATGC---------C-------------------------------------G-------------------------TTCG-GGCATGGGCATCCTTCCGC-------------------------AGCTAA--TTAGCTGAGCACTGCG-ATAAT------AGGACTG---CCCC--AC---TGAAAATACATA------------------------TATCT-----CGT------TTCGCAGGAACTTTGCCGCCGACCTTCCACTGTGCCCCTGCACCCTGGACCAGGCTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......GAGCTCTCTGCGATAATTGGATTCGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000200
.....................AATTGGATTCGCGCCGACCGATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0021000100
..................GATAATTGGATTCGCGCCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020100010
..........CTCTCTGCGATAATTGGATTCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTGTGCCCCTGCACCC............1911.0010100000
.....................AATTGGATTCGCGCCGACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.........GCTCTCTGCGATAATTGGATTCGCGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAACTTTGCCGCCGACCTT...............................2211.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACCTTCCACTGTGCCCCTGCACCCT...........2711.0011000000
...................ATAATTGGATTCGCGCCGACCGATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
..................GATAATTGGATTCGCGCCGACCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCACTGTGCCCCTGCACC.............2011.0011000000
.......GAGCTCTCTGCGATAATTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
..........CTCTCTGCGATAATTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTTGCCGCCGACCTTCCAC...........................2311.0010100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCCGACCTTCCACTGT........................2011.0010100000
...................ATAATTGGATTCGCGCCGACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
.....GCGAGCTCTCTGCGATAATTGGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
........AGCTCTCTGCGATAATTGGATTCGCGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTGCCGCCGACCTTCCACT..........................2311.0010000010
.........GCTCTCTGCGATAATTGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTCCACTGTGCCCCTGC................2111.0010100000
................GCGATAATTGGATTCGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
...................ATAATTGGATTCGCGCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
...........TCTCTGCGATAATTGGATTCGCGCCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
..................GATAATTGGATTCGCGCCGACCGATTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
.......................TTGGATTCGCGCCGACCGATTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
..................GATAATTGGATTCGCGCCGACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
droYak3
TGGGCGCGAGCTCTCTGCGATAATTGGATTCGCGCTGACCGATTCCTCAGGTAAGGCTCAAC----ACTCAACAAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATTT------------GGCCCGCTAATTAAAA--GC---GACC-AGAACGCCGATGGGG----A-TTGGCTAA--ATGGACGC---------T-------------------------------------C-------------------------TTCG-GGCATGGGCCGCCTTCCGC-------------------------AGCTAA--TTAGCTGAGGATTGCG-ATAAT------AGGACTG---GTCC--AT---TGAAAATACATA------------------------TACCT-----CGT------TTCGCAGGAACTTTGCCGCCGACCTGCCGCTGTGCCCCTGCACCCTGGACCAGGCTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................GATAATTGGATTCGCGCTGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2216.00600500010000
......................ATTGGATTCGCGCTGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00320010000000
.........GCTCTCTGCGATAATTGGATTCGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00301000020000
.....................AATTGGATTCGCGCTGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.00300200010000
..................GATAATTGGATTCGCGCTGACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00302000010000
.....................AATTGGATTCGCGCTGACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00201010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT------TTCGCAGGAACTTTGCCGCC.....................................2212.00220000000000
.........................................................................................................................................................................................................................................................................C---GACC-AGAACGCCGATGGGG----A-TTGGC................................................................................................................................................................................................................................................................................................................2611.00100000010000
..........CTCTCTGCGATAATTGGATTCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.............................................................................................................................................................................................................................................................................GACC-AGAACGCCGATGGGG----A-TT...................................................................................................................................................................................................................................................................................................................2211.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGCTGTGCCCCTGCACCCT...........2311.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATTGCG-ATAAT------AGGACTG---GTC........................................................................................................................2511.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCCGCCGACCTGCCGCTGTGCCC....................2611.00101000000000
...........TCTCTGCGATAATTGGATTCGCGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGACCTGCCGCTGTGCCCC...................2211.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATA------------------------TACCT-----CGT------TTCGCAC..................................................1911.00100100000000
...........................................................................................................................................................................................................................................................................................................CTAA--ATGGACGC---------T-------------------------------------C-------------------------TTCG-GGCATGGGC............................................................................................................................................................................................................2711.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCACCCTGGACCAGG...1811.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCCGACCTGCCGCTGT........................1911.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTGCCGCCGACCTGCC.............................2011.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGCTGTGCCCCTGCACC.............2111.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGCCGCCGACCTGCCGCT..........................2211.00101000000000
.........................................................................................................................................................................................................................................................................................CGATGGGG----A-TTGGCTAA--AT.........................................................................................................................................................................................................................................................................................................1911.00100000010000
.....................AATTGGATTCGCGCTGACCGATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
.....................AATTGGATTCGCGCTGACCGATTCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
...................ATAATTGGATTCGCGCTGACCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
......................ATTGGATTCGCGCTGACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCCTGCACCCTGGACCAGGC..2311.00101000000000
..............CTGCGATAATTGGATTCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
..GGCGCGAGCTCTCTGCGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..................GATAATTGGATTCGCGCTGACCGATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
.....................AATTGGATTCGCGCTGACCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCG-ATAAT------AGGACTG---GTCC--.....................................................................................................................2111.00101000000000
.........GCTCTCTGCGATAATTGGATTCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGCCGCCGACCTGCCGCT..........................2111.00100100000000
.......GAGCTCTCTGCGATAATTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACTTTGCCGCCGACCTGCCGC...........................2511.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGCCGCCGACCTGCCGCTGC........................2311.00110000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCGCCGACCTGCCGCTGT........................2111.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTGCCCCTGCACCCTG..........1911.00101000000000
.......................TTGGATTCGCGCTGACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..............................CGCGCTGACCGATTCCTCAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGCCCCTGCACCCTGGACCAGG...2511.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGCG-ATAAT------AGGACTG---GTC........................................................................................................................2211.00100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGCCGCCGACCTGCC.............................1911.00101000000000
.....GCGAGCTCTCTGCGATAATTGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.................CGATAATTGGATTCGCGCTGACCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
droEug1
TGGGCGAGAGCTCTCTGCGATAATTGGATTCGTACCGACAGATTCCTCAGGTAAGGCTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATTG------------GCCCCGCTAATTAAAA--GC---AACC-AAAACGCCGATGGGG----A-TTGGAGAA--ATGGTTGC---------C-------------------------------------A-------------------------TGCG-GGCGTGGGCATCCTTCCCC-------------------------AGTTAA--TTAGTAGAGGATTGCT-ATAAA------GGGACTT---CCCA--GC---TAAAAAAGCATG------------------------CCTTT-----CCT------TTCACAGGAACTTTGCCGCCGACCTTCCTCTTTGCCCTTGCACTTTGGACCAGGCTGSizeHit CountTotal NormTotal
No Reads
droBia1
TGGGCGAGAGCTCTCTGCGATAATTGGATTCGCGCCGACCGATTCCTCAGGTAAGGCTCAGC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATTTG------CATTTGGCCCGCTAATTAAAA--GC---AGCCGAAAACGCCGATGGGG----A-CTGGCCAA--ATGGAGGC---------T-------------------------------------G---------------------------------------------------------------------------GCTAA--TTAGCCGAGGATTGCA-ATAAA------GGGACTT---CCCA--GC--CTGAACATTCATA------------------------TTCCC-----CAT------TTCGCAGGAACTTTGCCGCCGACCTGCCCCTGTGCCCCTGCACCCTGGACCAGGCTGSizeHit CountTotal NormTotal
No Reads
droTak1
TGGGCGAGAGCTCTCTGCGATAATTGGATTCGCGCCGACCGATTCCTCAGGTAAGGCTCAGC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATTT------------GGCCCGCTAATTAAAA--GC---AACCGAAAACGCCAACGGGG----A-TTGGCCAACGATGGATGCC--------CATA-----------------------------------------------------------------------------------T-------------------------AGCTAA--TTAGCCGAGGATTGCA-ATAAA------GGTACTCTT-CCCCCAAC---TGAAATTTCATA------------------------TTCTC-----CCT------TTCGCAGGAACTTTGCCGCCGACCTTCCACTCTGCCCCTGCACCTTGGACCAGGCTGSizeHit CountTotal NormTotal
No Reads
droEle1
TGGGCGAGAGCTCTCTGCGATAATTGGATTCGCGCCGACCGATTCCTCAGGTAAGGCTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATGG------------GCCCCGCTAAATAAAA--GCCGAGACC-AAAATGCCAATGGGG---CATTTGGCGAA--ACGCCTGC---------T-------------------------------------A-------------------------TTTA-GGTTTGGG--------------------------------------------------------TGCA-ACGAG------GGTACTT---CCTT--TA---TTTTAATTCATA------------------------CTTCA-----ACT------TTTACAGGAACTTTGCCGCCGACTTGCCACTTTGTCCCTGCACTTTGGACCAGGCTGSizeHit CountTotal NormTotal
No Reads
droRho1
TGGGCCAGAGCTCTCTGCGATAATTGGATTCGAGCGGACCGATTCCTCAGGTAAGGCTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------GTGCATTTGCGTTG------------G-CCCGCTAATTAAAA--GC---GACC-AGTTTGCCAATGGGG----A-TTGGCGAA--ATG----------------------------------------------------------------------------------------------------CC-------------------------TGCTAA--TTACCCTA-GATTGCA-AC-------------------------------TAAAATTCATA------------------------ATTCG-----CTT------TCAACAGGAACTTCGCCGCTGATTTGCCACTTTGTCCCTGCACTTTGGACCAGGCTGSizeHit CountTotal NormTotal
No Reads
droFic1
TGGGCGAGAGCGCTCTGCGATAATTGGATCCGCGCCGACCGATTCCTCAGGTAAGGCCCAAC-----------AAAC-----------------------------------------------------------------------------------------------------------------------------------------------ATGCGTTTGCATTCGCATCCGCATTTGCCGCGCTAATTAAAA--GC---GGCC-AAAACGCCAGAGGGG----A-TTGGCGAA----GGGCGCC--------C-------------------------------------A-------------------------T--------TCGGCAGCCTTCCCC--------------------------GCTAA--TTAGCTTTGGATTGCG-ATAAA------GGGACTT---CCCA--CG---CTAACGCTCACT-----------------------GTTTCCACTCGCAT------TTCGCAGGAACTTTGCTGCTGACCTGCCCCTGTGCCCCTGCACCTTGGACCAGGCCGSizeHit CountTotal NormTotal
No Reads
droKik1
TGGCCGCGAGCTCTCTGCGATAATTGGATTCGCAGCGACCGATTCCTCAGGTAAGACTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTTGCATTT------------GCCGCGCTAATTAAAA--GC---AACC-A-AACGCGAAGGGGA------------AA--TTGGACGCACACTCGGCCATACAGCC--T--GACCCTGCCTT------------------------------------------------------------------------------------------CTAA--TTAGCGCAGGATTGCA-ATAAA------GGGAATT-TGCCCT--GG---CTAAAATGTATG------------------------TTGC------CGTTTTGC-TTTACAGAAACTTTGCCGCCGATTTGCCCCTGTGTCCCTGCACCCTTGACCAGGCGGSizeHit CountTotal NormTotal
No Reads
droAna3
TGGCCGCGGGCTCTTTGCGATAATTGGCTTCGCTCCGACCGATTCCTCAGGTAAGGCTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTCGCTTTT------------G--CTGCTAATTAAAA--GC---AACC-TGGCCGGCAC-----AACCA--------A---CGCAACC---------C--------GGT--TACCA--------------------------------------------------------GGC-----TCCCCAT--------------------------T-----------------------GAT------TGGAGTG---CCCT--TT---TTAAAAATCATA------------------------ATTTC-----CGT--TGA-TTTGCAGGAACTTTGCCGCCGACCTGCCGCTCTGCCCCTGCACCCTGGACCAGGCAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................TAATTGGCTTCGCTCCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2015.005140000
.....................AATTGGCTTCGCTCCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002020000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGCCGCCGACCTGCCGCTC.........................2211.001100000
..........CTCTTTGCGATAATTGGCTTCGCTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTGCCGCCGACC.................................1811.001010000
..................GATAATTGGCTTCGCTCCGACCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGACCTGCCGCTCTGCCC....................2011.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCCGACCTGCCGCTCC........................1911.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGCCGCCGACCTGCCGCTCT........................2311.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCTGCACCCTGGACCAGGCT.2311.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGCCGCCGACCTGCCGCT..........................2111.001010000
............CTTTGCGATAATTGGCTTCGCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
....................TAATTGGCTTCGCTCCGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..............................CGCTCCGACCGATTCCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCACCCTGGACCAGGC..1811.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACCTGCCGCTCTGCCCCTGCACCCTG..........2811.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCCCTGCACCCTGGACCA.....2111.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGACCTGCCGCTCTGCCCCTGC................2511.001100000
.......GGGCTCTTTGCGATAATTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..................GATAATTGGCTTCGCTCCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
....CGCGGGCTCTTTGCGATAATTGGCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
............CTTTGCGATAATTGGCTTCGCTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGCCCCTGCACCCTGGACCA.....2311.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCCGACCTGCCGCTCTG.......................2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGCTCTGCCCCTGCACCC............2211.001010000
.........GCTCTTTGCGATAATTGGCTTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.......GGGCTCTTTGCGATAATTGGCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
...........................CTTCGCTCCGACCGATTCCTCAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
............CTTTGCGATAATTGGCTTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
droBip1
TGGCCGCGGGCTCTTTGCGATAATTGGCTTCGCTCGGACCGATTCCTCAGGTAAGGCTCAAC-----------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------ATGCATTCGCATTT------------G--CTGCTAATTAAAA--GC---AACC-AGGCTCGCAC-----AGCGA--------A---CGCAACT---------C--------GGTGTGTCCT--------------------------------------------------------GGC-----TCCCC-------------------------AA-TGA--TTGGCTT-----CGCA-GGAAAACTGCTGGGACTG---CCCT--TT---TTAAAAATCATA------------------------ATTTC-----CGT--TGC-TTTGCAGGAACTTTGCCGCTGACCTGCCCCTATGCCCCTGCACTCTGGACCAGGCTGSizeHit CountTotal NormTotal
No Reads
dp5
TGGCCCCGAGCTCTCTGCGATAATTGGATACGCGCCGACCGATTCCTCAGGTAAGACATATATATCCCTCTAGGAGT-------------------------------------------------------------------------------------------------------GTA-----------------------------------GAATGCATTTGAAATT------------G--CCACTAATTAATGGGGC---TACC-G-AATGCCAA---------A-TTGG--AA--ATGGAAGC---------C---------------------GGTCTAATTAGAGGCAG-------------------------CGCGTGGCTTCGGCCT-----CGCTTTGTTTCGCGGGTTTTCATTTCAT--------------------------------------------------G----------AATTCACAT-TTCACATTGAAAACAA--CCTATTTCC-----C---------GTGCAGGAACTTTGCGGCGGATCTGCCATTGTGCCCCTGCACCCTGGACCAGGCCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................AATTGGATACGCGCCGACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030300000000
.....................AATTGGATACGCGCCGACCGATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020200000000
......................ATTGGATACGCGCCGACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020200000000
.....................AATTGGATACGCGCCGACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020200000000
..................GATAATTGGATACGCGCCGACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020200000000
.GGCCCCGAGCTCTCTGCGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020100001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTGCGGCGGATCTGCC.............................2211.0010100000000
.GGCCCCGAGCTCTCTGCGATAATTGGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
............CTCTGCGATAATTGGATACGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
......................................................................................................................................................................................................................................................................................................................AGC---------C---------------------GGTCTAATTAGAGGC.....................................................................................................................................................................................................................................................1911.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCCCTGCACCCTGGACCAGGCC.2611.0010100000000
.....................AATTGGATACGCGCCGACCGATTCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..................GATAATTGGATACGCGCCGACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
..................GATAATTGGATACGCGCCGACCGATTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.GGCCCCGAGCTCTCTGCGATAATTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
......................ATTGGATACGCGCCGACCGATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
....................TAATTGGATACGCGCCGACCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
...........TCTCTGCGATAATTGGATACGCGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.....................................................................................................................................................................................................................................................................................ATGCCAA---------A-TTGG--AA--ATGGAAGC---------..........................................................................................................................................................................................................................................................................................2211.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTGCGGCGGATCTG...............................2011.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGTGCCCCTGCACCCTGGACCAGGCC.2911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCATTGTGCCCCTGCACC.............2111.0010100000000
...CCCCGAGCTCTCTGCGATAATTGGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.........GCTCTCTGCGATAATTGGATACGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..................GATAATTGGATACGCGCCGACCGATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCCTGCACCCTGGACCAGG...2311.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--CCTATTTCC-----C---------GTGCAG..................................................1811.0010000100000
TGGCCCCGAGCTCTCTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTGCGGCGGATCTGC..............................1911.0010100000000
.......................TTGGATACGCGCCGACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...CCCCGAGCTCTCTGCGATAATTGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..........CTCTCTGCGATAATTGGATACGCGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100000
..GCCCCGAGCTCTCTGCGATAATTGGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATTGTGCCCCTGCACCCTGGAC.......2511.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGATCTGCCATTGTGCCC....................2111.0010100000000
..........CTCTCTGCGATAATTGGATACGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCTGCCATTGTGCCCCTGCACCCTG..........2811.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCGGCGGATCTGCCATTGTG.......................2311.0010100000000
..................GATAATTGGATACGCGCCGACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
droPer2
TGGCCCCGAGCTCTCTGCGATAATTGGATACGCGCCGACCGATTCCTCAGGTAAGACATATATATCCCTCTAGAAGT-------------------------------------------------------------------------------------------------------GTA-----------------------------------GGATGCATTTGGAATT------------G--CCACTAATTAATGGGGC---TACC-G-AATGCCAA---------A-TTGG--AA--ATGGAAGC---------C---------------------GGTCTAATTAGAGGCAG-------------------------CGCGTGGCTTCGGCCT-----CGCTTTGTTTCGCGGGTTTTCATTTCAT--------------------------------------------------G----------AATTCACAT-TTCACATTGAAAACAA---------CC-----CA-------TTTCCAGGAACTTTGCGGCGGACCTGCCATTGTGCCCCTGCACCCTGGACCAGGCCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............CTGCGATAATTGGATACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
...........TCTCTGCGATAATTGGATACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...................ATAATTGGATACGCGCCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..................GATAATTGGATACGCGCCGACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCCTGCACCCTGGACCA.....2111.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGCGGCGGACCTGCC.............................1911.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCCCTGCACCCTGGACCAG....2311.001001000
...CCCCGAGCTCTCTGCGATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
........................TGGATACGCGCCGACCGATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGCGGCGGACCTGCCATTGT........................2411.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATTGTGCCCCTGCACCCT...........2111.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGCGGCGGACCTGCC.............................1811.001010000
.....................AATTGGATACGCGCCGACCGATTCCTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
droWil2
TGGCCCAGAGCTTTGTGCGATAATTGGATACGCAACGACCGATTCCTGAGGTAAGTTTCACA-----TAA----AATGAATGCCACGCCC----------------------------------------------------GCAGGTGAGTTGGTAGAGATGATGCCTGAGATGATTGTGAAGGAGGAGGAGACGGTGTGGAGTGGGCGGGTAGTGGGAGTGCATTTGCATTT------------T--GTGCTAATTAAAA--GC---TGCC-AAATTGCCAATGGGA----A-ATG-CGAA--CTGG------------------------C--CTGCTAGCTGTCTAATTAGAGA--GCTGGGGAAGACATACAGAAATCCAGCGG-------------------------------------------CAA--------------------------------------------------G----------AAACAACAACAACACACAGAAAACAAAACAAATTTCC-----ATTTTTGCAATTTTAGAAACTTTGCTGCTGACTTGCCGTTATGTCCTTGTACCTTGGACCAGGCGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTGCTGCTGACTTGCCGT...........................2215.00500410
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTGCTGCTGACTTGCCGTTATGT......................2714.00420020
..................GATAATTGGATACGCAACGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00301200
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTGCTGCTGACTTGCCGTTAT........................2512.00200110
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTACCTTGGACCAGGC..1912.00200020
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTGCTGACTTGCCGTTAT........................2212.00200020
.....................AATTGGATACGCAACGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGTCCTTGTACCTTG..........1912.00201010
..................GATAATTGGATACGCAACGACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00201010
...................ATAATTGGATACGCAACGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200110
.......GAGCTTTGTGCGATAATTGGATACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00220000
....................TAATTGGATACGCAACGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..............................................................................................................................................................................................................................................................................................................A--CTGG------------------------C--CTGCTAGCTGTC................................................................................................................................................................................................................................................................1811.00100100
...............................................................................................................................................................GATGATGCCTGAGATGATTGTGAAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGACTTGCCGTTATGT......................2011.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTGACTTGCCGTTATGT......................2111.00101000
............TTGTGCGATAATTGGATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGCTGCTGACTTGCCGTTATGTC.....................2611.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCTGACTTGCCGTT..........................1811.00110000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACTTTGCTGCTGACTTGCCG............................2311.00100010
.......GAGCTTTGTGCGATAATTGGATAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
..............................................................................................................................................................................GATTGTGAAGGAGGAGGAGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTGCTGACTTGCCGTTATGT......................2411.00100100
................................................................................................................................................................................................................................................................................................................................................................TAGAGA--GCTGGGGAAGACA.......................................................................................................................................................................................................................................1911.00100010
TGGCCCAGAGCTTTGTGCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGCCGTTATGTCCTTGTACCTT...........2411.00100010
...........TTTGTGCGATAATTGGATACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.................CGATAATTGGATACGCAACGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..GCCCAGAGCTTTGTGCGATAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.........GCTTTGTGCGATAATTGGATACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
..........................GATACGCAACGACCGATTCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..................GATAATTGGATACGCAACGACCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
...................ATAATTGGATACGCAACGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTGCTGCTGACTTGCC.............................2011.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGACTTGCCGTTATGT......................1811.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTACCTTGGACCAGGCGG2111.00100100
......AGAGCTTTGTGCGATAATTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
..................GATAATTGGATACGCAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
......................ATTGGATACGCAACGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
.........GCTTTGTGCGATAATTGGATACGCAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
..............GTGCGATAATTGGATACGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
.....CAGAGCTTTGTGCGATAATTGGATACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGCTGCTGACTTGCC.............................1911.00101000
.......................................................................................................................................................................................................................................TTT------------T--GTGCTAATTAAAA--GC---T..............................................................................................................................................................................................................................................................................................................................................2011.00100100
.....................AATTGGATACGCAACGACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGCTGCTGACTTGCCGTTAT........................2311.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGCTGCTGACTTGCCGT...........................2011.00100010
.GGCCCAGAGCTTTGTGCGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.................CGATAATTGGATACGCAACGACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
droVir3
TGGCCCCGTGCTCTATGCGATAATTGGATACGCGCAGACCGATTTCTCAGGTAAGTCGAAAG----CTTTAAACAAT----GGCAGACTC-------------TCCAGTTACCA-----------------GTTTTCATCTGGC-----------------------------------------------------------------------TGCGCCTGCATTTACATTT------------T--CTGCTAATTAAAA--GC---TGGC-A-AATGTCAAGGGAA------C---------------AC---------C-----------------GCG-CTTTTAATTAGACACAG-------------------------CTCT-GGCCAGGCCA--------------------------------------AA--TAATCAAA-----------------------------------------------ATAATA------------------------CAAAA-----ATT--TGT-AATTCAGAAACTTTGCTGCCGACCTGCCGTTGTGCCCCTGCACCCTGGAGCAGGCGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTGCTGCCGACCTGCC.............................2013.003000100000000000000100000000001000000000000000000000000000000000
...................ATAATTGGATACGCGCAGACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000100000000000000000000000000000000000000000000000000000001000
.....................AATTGGATACGCGCAGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002100000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTGCTGCCGACCTGC..............................1912.002000200000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGACCTGCCGTTGTGCCCC...................2211.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTGCTGCCGACCTGCCGTT..........................2311.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGTGCCCCTGCACCCTGGAGCAGGC..2811.001000100000000000000000000000000000000000000000000000000000000000
...........................ATACGCGCAGACCGATTTCTCAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGACCTGCCGTTGTGCCCCTGC................2611.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCTGCACCCTGGAGCAGGC..2211.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGCCCCTGCACCCTGGAGCA.....2311.001000000000000000000000000000001000000000000000000000000000000000
........................................GATTTCTCAGGTAAGTCGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.................CGATAATTGGATACGCGCAGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
.................CGATAATTGGATACGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000100000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGCTGCCGACCTGCCGTTGT........................2411.001000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACTTTGCTGCCGACCTGC..............................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGCTGCCGACCTGCCGTTGTG.......................2511.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGCTGCCGACCTGCCGTTG.........................2211.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTGCTGCCGACCTGCCGTTGT........................2511.001000000000000000100000000000000000000000000000000000000000000000
...................ATAATTGGATACGCGCAGACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCCTGCACCCTGGAGCA.....2111.001001000000000000000000000000000000000000000000000000000000000000
............CTATGCGATAATTGGATACGCGCAGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
..................GATAATTGGATACGCGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000010000000000000000000000000000000000000000
....................................................................................AGACTC-------------TCCAGTTACCA-----------------GTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..............ATGCGATAATTGGATACGCGCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCCGACCTGCCGTTGT........................2011.001001000000000000000000000000000000000000000000000000000000000000
..................GATAATTGGATACGCGCAGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTGCCGTTGTGCCCCT..................1911.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGCCCCTGCACCCTGGAGCA.....2411.001001000000000000000000000000000000000000000000000000000000000000
..................GATAATTGGATACGCGCAGACCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-----------------------------------------------ATAATA------------------------CAAAA-----ATT--TGT-A........................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGTGCCCCTGCACCCTGGAGCA.....2511.001000000000000000000000010000000000000000000000000000000000000000
.........................GGATACGCGCAGACCGATTTCTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
......................ATTGGATACGCGCAGACCGATTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000001000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCCCTGCACCCTGGA........1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCCTGCACCCTGGAGCAGGC..2411.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCCTGCACCCTGGAGCAGGCG.2511.001000100000000000000000000000000000000000000000000000000000000000
.....................AATTGGATACGCGCAGACCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000001000000000000000000000000000
droMoj3
TGGCCTCGTGCTCTATGCGATAATTGGATACGGGCCGACAGATTTCTCAGGTATGTCATGGC-----------AAC-------------------------------------------------------------------------------------------------------------------------------------------------------TGCA-----------------GCTGCTCATTAAAA--GC---TG-----AACGAGTTTCGGG----A-G-----A---------GC---------T-------------------------------------G-------------------------TGCT-CTCATC-TCATCACATCTC-------------------------AGCTCAGTTTAGCTTCTGGCT-CAGGGAAAA------TTAC--------------------TAATCGAA-------------------------ATGT-----CAA------ATTGCAGAAACTTTGCCGCCGACCTGCCGCTGTGCCCCTGCACCCTGGAGCAGGCGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCCTGCACCCTGGAGCAGGCG.2512.002200000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACCTGCCGCTGTGCCCCT..................2011.001100000
......CGTGCTCTATGCGATAATTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCCTGCACCCTGGAGCAGGC..2411.001100000
............CTATGCGATAATTGGATACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCCTGCACCCTGGAGC......2011.001100000
.......................TTGGATACGGGCCGACAGATTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.............TATGCGATAATTGGATACGGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTTTGCCGCCGACCTGCCG............................2211.001100000
...................ATAATTGGATACGGGCCGACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
TGGCCTCGTGCTCTATGCGATAATTGGATACGCGCCGACCGATTTCTCAGGTAAGTT-----------------AATGCTTGTCCCACCCCACACCCCGCAACTACAC------CCGCACACAGCCAGAGCGCTTC---GAGGC-----------------------------------------------------------------------AGCTCCTGCATTTACATTT------------T--GTGCTAATTAAAA--GC---TGCC-A-AATGTCAA-GGGA----A-TTCTCTTG--TTGCTGGC---------T----------------------GTCTAATTAGA--CAG-------------------------CTTTTGGCCCTG-------------------------------------------------------ACT-CGACCAAAA------T---------------AAT-CTAAATAATATG------------------------AAAT--------T--TGA-AATACAGAAACTTTGCTGCCGATTTGCCACTGTGCCCCTGCACCCTGGAGCAGGCTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
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Generated: 05/19/2015 at 01:35 AM