ID:

dsi_29224

 Coordinate:

2r:7882757-7882886 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [2r_7882887_7882898_-]; five_prime_UTR [2r_7882899_7882957_-]; exon [2r_7882887_7882957_-]; exon [2r_7882582_7882756_-]; CDS [2r_7882582_7882756_-]; intron [2r_7882757_7882886_-]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------##################################################
GGTGATCGATCTGGTGAACAACTAGCACAGGATTTAAAATGGACAACATTGTGAGTGCCACTGGATTATAGAAACCCTTAGGGGTAACTCCTTGCACTTGAAAGCAGTGTTAAGGATTAAGGATTTATTCTGAATTACAAACAATGTAATGTATGGAAATTCATGGAACTTTCTCCTCAGGACGAAGATCTGACCCCCGAGCAGATTGCCGTTCTGCAGAAGGCATTCAA
**************************************************((((((.(((.((.((((((...((((....))))...((((((((((.......)))).))))))....(((.....))).............)))))).)))))..))))))(((......)))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553488
RT_0-2 hours eggs
....................ACTAGCACAGGATTTAAAATGGACAAC....................................................................................................................................................................................... 27 0 1 4.00 4 4 0 0 0 0 0 0
..................................................................................................................................................................................TTGACGAAGATCTGACCCCCGAGC............................ 24 2 1 3.00 3 3 0 0 0 0 0 0
.......................AGCACAGGATTTAAAATGGAC.......................................................................................................................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0
.......................AGCACAGGATTTAAAATGGACAAC....................................................................................................................................................................................... 24 0 1 3.00 3 3 0 0 0 0 0 0
.................................................................................................................................................................................ATTGACGAAGATCTGACCCCCGAGC............................ 25 3 1 2.00 2 2 0 0 0 0 0 0
.........................CACAGGATTTAAAATGGACAAC....................................................................................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0
...GATCGATCTGGTGAACAAC................................................................................................................................................................................................................ 19 0 1 2.00 2 2 0 0 0 0 0 0
...........................................................................................................................................................................................................GATTGCCGTTCTGCAGAAGGC...... 21 0 1 2.00 2 2 0 0 0 0 0 0
.................................................................................................................................................................................ATTGACGAAGATCTGACCCCCGAGCA........................... 26 3 1 2.00 2 1 0 1 0 0 0 0
.....TCGATCTGGTGAACAACTA.............................................................................................................................................................................................................. 19 0 1 2.00 2 2 0 0 0 0 0 0
.......GATCTGGTGAACAACTAGCACAGG....................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................................................................................................GACGAAGATCTGACCCCCGAGCAG.......................... 24 0 1 2.00 2 2 0 0 0 0 0 0
..................................................................................................................................................................................TTGACGAAGATCTGACCCCCG............................... 21 2 1 2.00 2 2 0 0 0 0 0 0
......................................................................................................................................................................................................GAGCAGATTGCCGTTCTGCTGTAGGC...... 26 2 1 1.00 1 0 1 0 0 0 0 0
.......................AGCACAGGATTTAAAATG............................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0
...............GAACAACTAGCACAGGAT..................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................ATTGACGAAGATCTGACCCCC................................ 21 3 1 1.00 1 1 0 0 0 0 0 0
....................ACTAGCACAGGATTTAAAATGGAC.......................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
.........................CACAGGATTTAAAATGGACAACAT..................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
..........................ACAGGATTTAAAATGGACAACAT..................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................ATTGACGAAGATCTGACCCCCG............................... 22 3 1 1.00 1 1 0 0 0 0 0 0
..........................ACAGGATTTAAAATGGACAACA...................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................GCAGATTGCCGTTCTGCAGAAGG....... 23 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................TTGCCGTTCTGCAGAAGGC...... 19 0 1 1.00 1 1 0 0 0 0 0 0
...........................CAGGATTTAAAATGGACAACAT..................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................................................................TTGACGAAGATCTGACCCCC................................ 20 2 1 1.00 1 1 0 0 0 0 0 0
................AACAACTAGCACAGGATTTAAAAT.............................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0
...GATCGATCTGGTGAACAACTAGCA........................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0
GGTGATCGATCTGGTGAACAACT............................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
......................TAGCACAGGATTTAAAATGGAC.......................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0
........................GCACAGGATTTAAAATGGACAAC....................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
........................GCACAGGATTTAAAATGGAC.......................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................CCGTTCTGCAGAAGGCATT... 19 0 1 1.00 1 1 0 0 0 0 0 0
..................CAACTAGCACAGGATTTAAAATGGAC.......................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
......................TAGCACAGGATTTAAAATG............................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................ATTGCCGTTCTGCAGAAGGC...... 20 0 1 1.00 1 1 0 0 0 0 0 0
............................AGGATTTAAAATGGACAAC....................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
........................GCACAGGATTTAAAATGGA........................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0
....................................................AAGTGCCAATGGATTGTAGAAA............................................................................................................................................................ 22 3 2 0.50 1 0 0 1 0 0 0 0
.............................................................................................................ATTGGGATTAAGGATTTATTCT................................................................................................... 22 3 3 0.33 1 0 0 0 0 1 0 0
.............................................................................................................................TATTCTGAATTACATAGA....................................................................................... 18 2 5 0.20 1 1 0 0 0 0 0 0
.................................................................................................................................................................................ATTGACGAAGATCTGACCCC................................. 20 3 6 0.17 1 1 0 0 0 0 0 0
............................................AACTTTGTGAGTGCGACT........................................................................................................................................................................ 18 2 10 0.10 1 0 0 0 0 0 1 0
..................................................................................................TTAAGGCAGTGTTGAGGATT................................................................................................................ 20 3 20 0.05 1 0 0 0 0 1 0 0
................................................................................................................................................................................TCAGGACTTAGAACTGACC................................... 19 3 20 0.05 1 0 0 0 0 0 0 1

Anti-sense strand reads

CCACTAGCTAGACCACTTGTTGATCGTGTCCTAAATTTTACCTGTTGTAACACTCACGGTGACCTAATATCTTTGGGAATCCCCATTGAGGAACGTGAACTTTCGTCACAATTCCTAATTCCTAAATAAGACTTAATGTTTGTTACATTACATACCTTTAAGTACCTTGAAAGAGGAGTCCTGCTTCTAGACTGGGGGCTCGTCTAACGGCAAGACGTCTTCCGTAAGTT
**************************************************((((((.(((.((.((((((...((((....))))...((((((((((.......)))).))))))....(((.....))).............)))))).)))))..))))))(((......)))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
...............................................................................................................................................................................................................CGGCGAGACGTCTTCAGTAAG.. 21 2 1 1.00 1 1 0 0 0 0
.......................................................ACGGTGACTTAATAT................................................................................................................................................................ 15 1 20 0.15 3 0 0 3 0 0
..................................................................................................................................................................................TCGTTCTTCTAGACTGG................................... 17 2 8 0.13 1 0 1 0 0 0
............................................................................................................CAATTGCTAATTCCT........................................................................................................... 15 1 12 0.08 1 0 0 0 0 1
................................................................................................................................................................................AGTTCTGCTACTAGATTGG................................... 19 3 13 0.08 1 0 1 0 0 0
........................CGTGTCCTAGATTTT............................................................................................................................................................................................... 15 1 13 0.08 1 0 0 0 1 0
........................................................................................AGGAACGCGTACTTTCG............................................................................................................................. 17 2 14 0.07 1 0 0 0 1 0
.............................CCTAAATTTCACCTG.......................................................................................................................................................................................... 15 1 17 0.06 1 0 0 1 0 0
.....................................................................................................................................................................................TGCTTCAAGACTTGGG................................. 16 2 20 0.05 1 0 1 0 0 0
.....................................................TCACGGTTACCTAACAT................................................................................................................................................................ 17 2 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:7882707-7882936 - dsi_29224 GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAAAATGGACAACATTGTGAGTGCCAC------TGGATTAT-----------------------------------------------------AGAAACCCTTAGGGGTAACTCC------------------------------------------------------------TTGCACTTGAAAGCAGTGTTAAGGATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGG---ATTTATTCTGAATTACAAACAATGTAATGTATGGAAATTCATGGA--A----------------CTTTCTCCTCAGGACGAAGATCTGACCCCCGAGCAGATTGCCGTTCTGCAGAAGGCATTCAA
droSec2 scaffold_1:4730619-4730841 - GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAATATGGACAACATTGTGAGTGCCAC------TGGATTAT-----------------------------------------------------AGAAACCCTTAGGGGTAACTCC------------------------------------------------------------TTGCACTTGAAAGCAGTGTTAA----------------------------------------------------------------------------------------------------------------GG------------------------------------------------------------------------------------------------------------------------------------ATTTATTTCGAATTACAAGCAAAGTAATGTATGGAAATTCATGGA--A----------------CTTTCTCCTCAGGACGAAGATCTGACCCCCGAGCAGATTGCCGTTCTGCAGAAGGCATTCAA
dm3 chr2R:7162520-7162775 - GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAAAATGGATAACATTGTGAGTGCCAC------TGGATTAT-----------------------------------------------------AGAAACCCCTAGGGGTAACACC------------------------------------------------------------TTGCACTTGAAAGCAGTGTTAA----------------------------------------------------------------------------------------------------------------GGAATAGA--------------------G---------------------------------------------AAATGTCGTTTCTCATCAATTTA-------------------------------AAG---ATTTTTACCGAATTACAAACGAAGTAATGTATGGAAATTCATGGA--A----------------CTTTCTTCTCAGGACGAAGACCTGACCCCCGAGCAGATTGCCGTTCTGCAGAAGGCATTCAA
droEre2 scaffold_4845:18625724-18625931 + GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GACTTAACATGGACAACATTGTGAGTGCAGC------TGGAATG--------------------------------------------------------CAAAT--TAT-GGCAGCCAC------------------------------------------------------------TTGCACTTGAAA-AAGTGTTTA----------------------------------------------------------------------------------------------------------------GGCAGAGG--------------------G---------------------------------------------AAAT---------------------------------------------------------------TCGAATTAC------GTTAATTTAT--------ACGGGAAA----------------TTTTCTTAACAGGACGAAGACCTGACCCCCGAGCAGATTGCCGTGCTGCAGAAGGCATTCAA
droYak3 2R:1977126-1977386 + GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAACATGGAGAACATTGTGAGTGCAAC------TGGGTTAT-----------------------------------------------------TGAAACC--TAGGGCAAACACC------------------------------------------------------------TTGCACTTGAAAA-AGTGTTAT----------------------------------------------------------------------------------------------------------------GGAACAGA--------------------G---------------------------------------------AAAATCCGTTT-----------------------------------TTTTATCACGG---ATTTATACCAAATTACAAACAATGTAATGTGTAAAAACTCACTGA--ACGCAT----TTCTATGCTTTCTCCTCAGGACGAAGACCTGACCCCCGAGCAGATTGCCGTTCTGCAGAAGGCATTCAA
droEug1 scf7180000409462:1341452-1341559 + GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAACATGGATATTCTTGTGAGTGGAGC------TGGATTAA-----------------------------------------------------AGAAAACCTTAAGGATAACCAA------------------------------------------------------------TCTTACTTGGAGATAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301754:1127984-1128073 + GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAACATGGACAACATTGTGAGTGGAGC------TGGATTGG-----------------------------------------------------GGGAAACCTATGGGATAACCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415313:89876-89959 + GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAAAATGGAGAACATTGTGAGTGGCAC------TGGATTAA-----------------------------------------------------CGAAAACCTTAAAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491214:2607657-2607784 - GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAACATGGACAACATTGTGAGTGCAGC------GAGATTAA-----------------------------------------------------AGAAAACCTTAAGGACAACCAATTAAAT------------------------------------------ATGGTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACAACGAC--A----------------ATTTAT--------------------------------------------------AATAAA
droRho1 scf7180000779263:396691-396851 + GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAACATGGACAACATTGTGAGTGCAGC------GGGATTAA-----------------------------------------------------AGGAAACCTAAAGGATAGCCAT------------------------------------------------------------TCAAACTTTGAGAAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAATAACAGATATAAAGT-------------------ACTTAAGCGGGTTT---------------TAAATATTTAAATGTAT----------------------------------------------------------------------------------------------
droFic1 scf7180000453773:104954-105183 - GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAACATGGACAACATTGTGAGTGGAGA------GGGATTAG-----------------------------------------------------GAA-TATTCAAAGGATTTTA----AGTG--GCAGAAAAGAACTGCCCACAACAACTCCAGTTATTTAATTTCAGTAGAGATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATTAAAT----TTTAT--------------TCTTAT---------------------------------------------------TTC--CGCT--TATTTCAGGATGAAGATCTGACCCCTGAGCAGATTGCCGTTCTGCAGAAGGCATTCAA
droKik1 scf7180000302682:6970-7275 + GGAGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAACATGGAGAACATTGTAAGTGGAGC------AG-----------ATGAG----ATCGT-------GATCTGAGGATTAGGATGGAGGGTTATTA----------------------AAAG------------------------------------------ATAGTGA-------------------------------------------------------------------------------AAAGAAATTATTAAATCTTGAAACGTATTAGTATATTCTTAAAAAATGTAATAATTTAAAGGTGGTGACCT---------------------CTTTTGTTTTGAAAATATCTCCAAAAGTTG-GCCAAAGACTT------C--------------------GTCACTAAAC-------------------------------------------------------------------------CAT----TTC--CTCTTTGCTTCCAGGATGAGGACCTGACCCCCGAGCAGATTGCCGTTCTGCAGAAGGCATTCAA
droAna3 scaffold_13266:870849-871159 - GGAGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTCAACATGGAGAACATTGTGAGTGGGTTT-----TGGAATAAAGGCC---------------------TAT-------------------------------CTTAGGATTGAC-AT------------------------------------------------------------TC------------------AAGGATCAAGGATATTTGGATTATCAGCAAGGGTCTTTTTTCAAGACCTATTTAAAAAAAACTGTTA-----T-----------------------------------------GGAACTGACCTAGTTATAGTTCCTTTTAGAAACATTTGTTCTG------CCTCCAT---TTTTTAAGAAGCCTT------G--------------------T------------------------------------AAACTAAAAAACAA----------------------------------TCAATT------GTTCCATTCCAGGATGAGGATCTGACCCCCGAGCAGATTGCCGTTCTGCAGAAGGCATTCAA
droBip1 scf7180000396730:1878480-1878694 - GGAGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTCAAAATGGAGAACATAGTGAGTGGAATA-----TGGATTAGGGGCC---------------------C------------------------------------------GTCTTC------------------------------------------------------------TTCTTCT-----------TTAA-------GGATATATGGATTATCAACTATTATCAATTATC------------------------------------------------------------------------------------------------------------------------------AA---------------------------TTATT-------------ATCAATAAAA----TT-------------------------------------------------------TC------------TCAATT------TTCGTATTCCAGGATGAGGATCTGACCCCCGAGCAGATTGCCGTTCTGCAGAAGGCATTCAA
dp5 3:11047967-11048143 - GGTGATCTATCTGGTGAACAACGAGCATCAGCAGCAGAAG----------AGTTCAGCATGGATAATATTGTGCGTGGAGC------AAG----------ACGAGGATTATAGCTATCCGG-----------------------------------------------------ATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTAATGCGGCTT---------------T-------------------------------A----------------ATTGCTTTGCAGGATGAAGACCTGACCCCCGAGCAGATTGCCGTTCTGCAGAAGGCATTCAA
droPer2 scaffold_4:6370533-6370709 - GGTGATCTATCTGGTGAACAACGAGTATCAGCAGCAGAAG----------AGTTCAGCATGGATAACATTGTGAGTGGAGC------AAG----------ACGAGGATTATAGCTATCCGG-----------------------------------------------------ATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTAATTCGGCTT---------------T-------------------------------A----------------ATTGCTTTGCAGGATGAAGACCTGACCCCCGAGCAGATTGCCGTTCTGCAGAAGGCATTCAA
droWil2 scf2_1100000004513:468942-469115 - GGTGATCTTGCTGGTGAAGAACGGAACGGAACCACT--------------GAAATAAAATGGATAACATTGTGAGTTTTAATTAAAAAAA----------AAAAAACTGATACCAATCGGA-----------------------------------------------------CT------------------------------------------------------------------AAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCTAAT----------------------------------TGTGTGTAAA----------------------------------TTTAGGATGAAGATCTGACCCCCGAGCAGATTGCTGTGCTCCAGAAGGCCTTCAA
droVir3 scaffold_10324:357043-357225 - dvi_715 GGTGATCTTTTGTGTAAAGAACAAAGGC-AG-AGCAGAAA--------AACTCAAAACATGGACAACATTGTGAGTTTTC-------GGGAATG-------------------------------------------------------GC-ATT---------------------------------------------------------------TGTTGGGGGATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA----------------------------------------------TTGTTAGCC----CTTGG--------------TTATGT-----------------------------------------G----------AT--TGCGTAATTAACAGGATGAGGATCTGACACCTGAGCAAATTGCGGTGCTGCAAAAGGCATTCAA
droMoj3 scaffold_6496:2167820-2168004 - GTTGATCCGTCGGGTGAAGAACAAAGCAGAGCATCAAAAT----------AAATAAATATGGATGTCATTGTGAGTTTGAA------ATTATTCG-----------------------------------------------------AATAATTCGAAGGGCGCATTCT--------------------------------------------------------------------GATTGTTGTGTTGT----------------------------------------------------------------------------------------------------------------GT------------------------------------------------------------------------------------------------------------------------------------TTGTGT----------------------------------------------------------TTCGATTTGCAGGATGACGATCTTACACCTGAGCAGATTGCCGTGCTGCAGAAGGCCTTCAA
droGri2 scaffold_15245:15267611-15267779 + GGTGATCTTTCTGGTGAACAACAAAGAGCAGCAA---AGAAAAAAGAGAA-CTCAAACATGGA---CATCGTGAGTTGAGTG-----AGGATTAT-----------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATAAACTTAT-----GTCTT-------------------------------------------------ATGGT--A----------------ATTGCTTTACAGGATGAGGATCTGACGCCCGAGCAAATTGCTGTGCTCCAAAAGGCATTCAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAAAATGGACAACATTGTGAGTGCCAC------TGGATTAT-----------------------------------------------------AGAAACCCTTAGGGGTAACTCC------------------------------------------------------------TTGCACTTGAAAGCAGTGTTAAGGATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGG---ATTTATTCTGAATTACAAACAATGTAATGTATGGAAATTCATGGA--A----------------CTTTCTCCTCAGGACGAAGATCTGACCCCCGAGCAGATTGCCGTTCTGCAGAAGGCATTCAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................ACTAGCAC-AG-------------------GATTTAAAATGGACAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.00400400000000000000
.......................AGCAC-AG-------------------GATTTAAAATGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00300300000000000000
.......................AGCAC-AG-------------------GATTTAAAATGGACAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00300300000000000000
.........................CAC-AG-------------------GATTTAAAATGGACAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200000000000000
...GATCGATCTGGTGAACAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGCCGTTCTGCAGAAGGC......2112.00200200000000000000
.....TCGATCTGGTGAACAACTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200000000000000
.......GATCTGGTGAACAACTAGCAC-AG-------------------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200200000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAAGATCTGACCCCCGAGCAG..........................2412.00200200000000000000
.......................AGCAC-AG-------------------GATTTAAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
...............GAACAACTAGCAC-AG-------------------GAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
....................ACTAGCAC-AG-------------------GATTTAAAATGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.........................CAC-AG-------------------GATTTAAAATGGACAACAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
..........................AC-AG-------------------GATTTAAAATGGACAACAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
..........................AC-AG-------------------GATTTAAAATGGACAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATTGCCGTTCTGCAGAAGG.......2311.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCGTTCTGCAGAAGGC......1911.00100100000000000000
...........................C-AG-------------------GATTTAAAATGGACAACAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
................AACAACTAGCAC-AG-------------------GATTTAAAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000100000
...GATCGATCTGGTGAACAACTAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000100000
GGTGATCGATCTGGTGAACAACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
......................TAGCAC-AG-------------------GATTTAAAATGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000100000
........................GCAC-AG-------------------GATTTAAAATGGACAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
........................GCAC-AG-------------------GATTTAAAATGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTTCTGCAGAAGGCATT...1911.00100100000000000000
..................CAACTAGCAC-AG-------------------GATTTAAAATGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
......................TAGCAC-AG-------------------GATTTAAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCCGTTCTGCAGAAGGC......2011.00100100000000000000
.............................AG-------------------GATTTAAAATGGACAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
........................GCAC-AG-------------------GATTTAAAATGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
droSec2
GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAATATGGACAACATTGTGAGTGCCAC------TGGATTAT-----------------------------------------------------AGAAACCCTTAGGGGTAACTCC------------------------------------------------------------TTGCACTTGAAAGCAGTGTTAA----------------------------------------------------------------------------------------------------------------GG------------------------------------------------------------------------------------------------------------------------------------ATTTATTTCGAATTACAAGCAAAGTAATGTATGGAAATTCATGGA--A----------------CTTTCTCCTCAGGACGAAGATCTGACCCCCGAGCAGATTGCCGTTCTGCAGAAGGCATTCAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................TAATATGGACAACATTGTGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCTGACCCCCGAGCA...........................1811.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGACCCCCGAGCAGATTGCCGTTCTG..............2711.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGCCGTTCTGCAGAAGGC......2111.0010010
.GTGATCGATCTGGTGAACAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
....ATCGATCTGGTGAACAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..............TGAACAACTAGCAC-AG-------------------GA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...GATCGATCTGGTGAACAACTAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
dm3
GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAAAATGGATAACATTGTGAGTGCCAC------TGGATTAT-----------------------------------------------------AGAAACCCCTAGGGGTAACACC------------------------------------------------------------TTGCACTTGAAAGCAGTGTTAA----------------------------------------------------------------------------------------------------------------GGAATAGA--------------------G---------------------------------------------AAATGTCGTTTCTCATCAATTTA-------------------------------AAG---ATTTTTACCGAATTACAAACGAAGTAATGTATGGAAATTCATGGA--A----------------CTTTCTTCTCAGGACGAAGACCTGACCCCCGAGCAGATTGCCGTTCTGCAGAAGGCATTCAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.GTGATCGATCTGGTGAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTAATGTATGGAAATTCATGGA--...............................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........TGGTGAACAACTAGCAC-AG-------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GATCGATCTGGTGAACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TGGTGAACAACTAGCAC-AG-------------------GAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GATCTGGTGAACAACTAGCAC-AG-------------------GA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GATCTGGTGAACAACTAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGCCGTTCTGCAGAAGGC......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATTGCCGTTCTGCAGA..........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................GGATTAT-----------------------------------------------------AGAAACCCCTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTAATGTATGGAAATTC......................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCCCGAGCAGATTGCC....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTGACCCCCGAGCAGATTGCCGTT.................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GTGATCGATCTGGTGAACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GAACAACTAGCAC-AG-------------------GAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCTGACCCCCGAGCA...........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGTTCTGCAGAAGGC......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TGATCGATCTGGTGAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCCCGAGCAGATTGCCGTTCT...............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GACTTAACATGGACAACATTGTGAGTGCAGC------TGGAATG--------------------------------------------------------CAAAT--TAT-GGCAGCCAC------------------------------------------------------------TTGCACTTGAAA-AAGTGTTTA----------------------------------------------------------------------------------------------------------------GGCAGAGG--------------------G---------------------------------------------AAAT---------------------------------------------------------------TCGAATTAC------GTTAATTTAT--------ACGGGAAA----------------TTTTCTTAACAGGACGAAGACCTGACCCCCGAGCAGATTGCCGTGCTGCAGAAGGCATTCAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............GAACAACTAGCAC-AG-------------------GACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGCCGTGCTGCAGAAGG.......2011.0010001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGCCGTGCTGCAGAAGGC......2111.0010100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGATTGCCGTGCTGCAGA..........2211.0010100000
...GATCGATCTGGTGAACAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCCCGAGCAGATTGCCGTG.................2211.0010000010
...............GAACAACTAGCAC-AG-------------------GACTTAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTGCCGTGCTGCAGAA.........1911.0011000000
..........CTGGTGAACAACTAGCAC-AG-------------------GACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCCCGAGCAGATTGCCGT..................2111.0010001000
...................AACTAGCAC-AG-------------------GACTTAACATGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
........................GCAC-AG-------------------GACTTAACATGGACAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
droYak3
GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAACATGGAGAACATTGTGAGTGCAAC------TGGGTTAT-----------------------------------------------------TGAAACC--TAGGGCAAACACC------------------------------------------------------------TTGCACTTGAAAA-AGTGTTAT----------------------------------------------------------------------------------------------------------------GGAACAGA--------------------G---------------------------------------------AAAATCCGTTT-----------------------------------TTTTATCACGG---ATTTATACCAAATTACAAACAATGTAATGTGTAAAAACTCACTGA--ACGCAT----TTCTATGCTTTCTCCTCAGGACGAAGACCTGACCCCCGAGCAGATTGCCGTTCTGCAGAAGGCATTCAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCTGACCCCCGAGCAGATTGCCGT..................2711.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGCCGTTCTGCAGAAGG.......2011.00100100000000
...................AACTAGCAC-AG-------------------GATTTAACAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCTGACCCCCGAGCAC..........................1911.00100100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCAGATTGCCGTTCTGCAGAAGGC......2711.00100100000000
GGTGATCGATCTGGTGAACAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
...GATCGATCTGGTGAACAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
...GATCGATCTGGTGAACAACTAGCAC-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
................AACAACTAGCAC-AG-------------------GATTTAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTGCCGTTCTGCAGAAGGC......2211.00100100000000
droEug1
GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAACATGGATATTCTTGTGAGTGGAGC------TGGATTAA-----------------------------------------------------AGAAAACCTTAAGGATAACCAA------------------------------------------------------------TCTTACTTGGAGATAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAACATGGACAACATTGTGAGTGGAGC------TGGATTGG-----------------------------------------------------GGGAAACCTATGGGATAACCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAAAATGGAGAACATTGTGAGTGGCAC------TGGATTAA-----------------------------------------------------CGAAAACCTTAAAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAACATGGACAACATTGTGAGTGCAGC------GAGATTAA-----------------------------------------------------AGAAAACCTTAAGGACAACCAATTAAAT------------------------------------------ATGGTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACAACGAC--A----------------ATTTAT--------------------------------------------------AATAAASizeHit CountTotal NormTotal
No Reads
droRho1
GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAACATGGACAACATTGTGAGTGCAGC------GGGATTAA-----------------------------------------------------AGGAAACCTAAAGGATAGCCAT------------------------------------------------------------TCAAACTTTGAGAAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATAATAACAGATATAAAGT-------------------ACTTAAGCGGGTTT---------------TAAATATTTAAATGTAT----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GGTGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAACATGGACAACATTGTGAGTGGAGA------GGGATTAG-----------------------------------------------------GAA-TATTCAAAGGATTTTA----AGTG--GCAGAAAAGAACTGCCCACAACAACTCCAGTTATTTAATTTCAGTAGAGATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATTAAAT----TTTAT--------------TCTTAT---------------------------------------------------TTC--CGCT--TATTTCAGGATGAAGATCTGACCCCTGAGCAGATTGCCGTTCTGCAGAAGGCATTCAASizeHit CountTotal NormTotal
No Reads
droKik1
GGAGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTTAACATGGAGAACATTGTAAGTGGAGC------AG-----------ATGAG----ATCGT-------GATCTGAGGATTAGGATGGAGGGTTATTA----------------------AAAG------------------------------------------ATAGTGA-------------------------------------------------------------------------------AAAGAAATTATTAAATCTTGAAACGTATTAGTATATTCTTAAAAAATGTAATAATTTAAAGGTGGTGACCT---------------------CTTTTGTTTTGAAAATATCTCCAAAAGTTG-GCCAAAGACTT------C--------------------GTCACTAAAC-------------------------------------------------------------------------CAT----TTC--CTCTTTGCTTCCAGGATGAGGACCTGACCCCCGAGCAGATTGCCGTTCTGCAGAAGGCATTCAASizeHit CountTotal NormTotal
No Reads
droAna3
GGAGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTCAACATGGAGAACATTGTGAGTGGGTTT-----TGGAATAAAGGCC---------------------TAT-------------------------------CTTAGGATTGAC-AT------------------------------------------------------------TC------------------AAGGATCAAGGATATTTGGATTATCAGCAAGGGTCTTTTTTCAAGACCTATTTAAAAAAAACTGTTA-----T-----------------------------------------GGAACTGACCTAGTTATAGTTCCTTTTAGAAACATTTGTTCTG------CCTCCAT---TTTTTAAGAAGCCTT------G--------------------T------------------------------------AAACTAAAAAACAA----------------------------------TCAATT------GTTCCATTCCAGGATGAGGATCTGACCCCCGAGCAGATTGCCGTTCTGCAGAAGGCATTCAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTGCCGTTCTGCAGAAGGC......2213.003030000
...............GAACAACTAGCAC-AG-------------------GATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003030000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATTGCCGTTCTGCAGAAGGCATT...2712.002020000
.......................AGCAC-AG-------------------GATTCAACATGGAGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGCCGTTCTGCAGAAGGC......2112.002020000
.......................AGCAC-AG-------------------GATTCAACATGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002020000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATTGCCGTTCTGCAGAAGGC......2412.002020000
......CGATCTGGTGAACAACTAGCAC-AG-------------------GA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGACCCCCGAGCAG..........................1811.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCTGACCCCCGAGCAGATTGCC....................2511.001010000
............GGTGAACAACTAGCAC-AG-------------------GATTCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.......GATCTGGTGAACAACTAGCAC-AG-------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.....................CTAGCAC-AG-------------------GATTCAACATGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...............GAACAACTAGCAC-AG-------------------GATTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCCCCGAGCAGATTGCCGTTCT...............2511.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTTCTGCAGAAGGCATT...1911.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAGGATCTGACCCCCGAGCA...........................2311.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCCGTTCTGCAGAAGG.......1911.001001000
...GATCGATCTGGTGAACAACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.......................AGCAC-AG-------------------GATTCAACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
....................ACTAGCAC-AG-------------------GATTCAACATGGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
GGAGATCGATCTGGTGAACAACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...........................C-AG-------------------GATTCAACATGGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCCGTTCTGCAGAAGGC......2011.001010000
.......................................................................................................................................................................................................................................................................ATTTGGATTATCAGCAAG.......................................................................................................................................................................................................................................................................................................................................................1811.001010000
.................ACAACTAGCAC-AG-------------------GATTCAACATGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.......GATCTGGTGAACAACTAGCAC-AG-------------------GATTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGATTGCCGTTCTGCAGAAGGC......2611.001010000
........................GCAC-AG-------------------GATTCAACATGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
droBip1
GGAGATCGATCTGGTGAACAACTAGCAC-AG-------------------GATTCAAAATGGAGAACATAGTGAGTGGAATA-----TGGATTAGGGGCC---------------------C------------------------------------------GTCTTC------------------------------------------------------------TTCTTCT-----------TTAA-------GGATATATGGATTATCAACTATTATCAATTATC------------------------------------------------------------------------------------------------------------------------------AA---------------------------TTATT-------------ATCAATAAAA----TT-------------------------------------------------------TC------------TCAATT------TTCGTATTCCAGGATGAGGATCTGACCCCCGAGCAGATTGCCGTTCTGCAGAAGGCATTCAASizeHit CountTotal NormTotal
No Reads
dp5
GGTGATCTATCTGGTGAACAACGAGCATCAGCAGCAGAAG----------AGTTCAGCATGGATAATATTGTGCGTGGAGC------AAG----------ACGAGGATTATAGCTATCCGG-----------------------------------------------------ATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTAATGCGGCTT---------------T-------------------------------A----------------ATTGCTTTGCAGGATGAAGACCTGACCCCCGAGCAGATTGCCGTTCTGCAGAAGGCATTCAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGATTGCCGTTCTGCAGAAGGC......2612.0020000000002
....ATCTATCTGGTGAACAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCTGACCCCCGAGCAGATTGCC....................2511.0010010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTGACCCCCGAGCAG..........................1811.0010100000000
................AACAACGAGCATCAGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCTGACCCCCGAGCA...........................1811.0010000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGCAGATTGCCGTTCTGCA............2211.0010100000000
.............GTGAACAACGAGCATCAGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
..................CAACGAGCATCAGCAGCAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
GGTGATCTATCTGGTGAACAACGAGTATCAGCAGCAGAAG----------AGTTCAGCATGGATAACATTGTGAGTGGAGC------AAG----------ACGAGGATTATAGCTATCCGG-----------------------------------------------------ATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTAATTCGGCTT---------------T-------------------------------A----------------ATTGCTTTGCAGGATGAAGACCTGACCCCCGAGCAGATTGCCGTTCTGCAGAAGGCATTCAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGCCGTTCTGCAGAA.........1813.003300000
..............TGAACAACGAGTATCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATTGCCGTTCTGCAGAA.........2012.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGACCTGACCCCCGAGC............................2111.001100000
........................GTATCAGCAGCAGAAG----------AGTTCAGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGCCGTTCTGCAGAAGGC......2111.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAAGACCTGACCCCC................................1811.001100000
...GATCTATCTGGTGAACAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
droWil2
GGTGATCTTGCTGGTGAAGAACGGAACGGAACCACT--------------GAAATAAAATGGATAACATTGTGAGTTTTAATTAAAAAAA----------AAAAAACTGATACCAATCGGA-----------------------------------------------------CT------------------------------------------------------------------AAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCTAAT----------------------------------TGTGTGTAAA----------------------------------TTTAGGATGAAGATCTGACCCCCGAGCAGATTGCTGTGCTCCAGAAGGCCTTCAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................AACCACT--------------GAAATAAAATGGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000
........TGCTGGTGAAGAACGGAACGGAACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00210010
...GATCTTGCTGGTGAAGAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00201100
..................GAACGGAACGGAACCACT--------------GAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200110
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGATCTGACCCCCGAGCAGAT........................2511.00100010
..................GAACGGAACGGAACCACT--------------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
..................................................GAAATAAAATGGATAACAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.......................GAACGGAACCACT--------------GAAATAAAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGCTGTGCTCCAGAAGGC......2111.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGATCTGACCCCCGAGCAGATTG......................2611.00100010
...GATCTTGCTGGTGAAGAACGGAACGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAAGATCTGACCCCCGAGC............................2211.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATCTGACCCCCGAGCA...........................2011.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATTGCTGTGCTCCAGAAG........2211.00100010
...GATCTTGCTGGTGAAGAACGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGTGCTCCAGAAGGC......1811.00100010
......CTTGCTGGTGAAGAACGGAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
......CTTGCTGGTGAAGAACGGAACGGAACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGCAGATTGCTGTGCTCC.............2111.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATTGCTGTGCTCCAGAAGGC......2411.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGATCTGACCCCCGAGC............................2111.00100010
.........GCTGGTGAAGAACGGAACGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTAAT----------------------------------TGTGTGTAAA----------------------------------TTTA...................................................2111.00100010
...........TGGTGAAGAACGGAACGGAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
droVir3
GGTGATCTTTTGTGTAAAGAACAAAGGC-AG-AGCAGAAA--------AACTCAAAACATGGACAACATTGTGAGTTTTC-------GGGAATG-------------------------------------------------------GC-ATT---------------------------------------------------------------TGTTGGGGGATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA----------------------------------------------TTGTTAGCC----CTTGG--------------TTATGT-----------------------------------------G----------AT--TGCGTAATTAACAGGATGAGGATCTGACACCTGAGCAAATTGCGGTGCTGCAAAAGGCATTCAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGTGCTGCAAAAGGC......1811.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAGCAAATTGCGGTGCT...............2011.001000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCGGTGCTGCAAAAGGC......2111.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATTGCGGTGCTGCAAAAGGC......2311.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATCTGACACCTGAGCAAATTGCGGTGCTGCAAAAGGCATT...4311.001000000000000000000000000000000000000000000000000000000000010000
......CTTTTGTGTAAAGAACAAAGGC-AG-AGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGGTGCTGCAAAAGGC......2011.001000100000000000000000000000000000000000000000000000000000000000
....................................GAAA--------AACTCAAAACATGGACAACAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATCTGACACCTGAGC............................1920.501000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGAGGATCTGACACCTGAGCA...........................2420.501000000000000000000000000000000000000000000000000000000000000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGAGGATCTGACACCTGAGC............................2320.501000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGGATCTGACACCTGAG.............................2020.501000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATCTGACACCTGAGCAA..........................2120.501000000000000000000000000000010000000000000000000000000000000000
droMoj3
GTTGATCCGTCGGGTGAAGAACAAAGCAGAGCATCAAAAT----------AAATAAATATGGATGTCATTGTGAGTTTGAA------ATTATTCG-----------------------------------------------------AATAATTCGAAGGGCGCATTCT--------------------------------------------------------------------GATTGTTGTGTTGT----------------------------------------------------------------------------------------------------------------GT------------------------------------------------------------------------------------------------------------------------------------TTGTGT----------------------------------------------------------TTCGATTTGCAGGATGACGATCTTACACCTGAGCAGATTGCCGTGCTGCAGAAGGCCTTCAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................CAAAGCAGAGCATCAAAAT----------AAATAAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...............GAAGAACAAAGCAGAGCATCAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCTGAGCAGATTGCCGT..................2011.001000010
..................GAACAAAGCAGAGCATCAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
droGri2
GGTGATCTTTCTGGTGAACAACAAAGAGCAGCAA---AGAAAAAAGAGAA-CTCAAACATGGA---CATCGTGAGTTGAGTG-----AGGATTAT-----------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATAAACTTAT-----GTCTT-------------------------------------------------ATGGT--A----------------ATTGCTTTACAGGATGAGGATCTGACGCCCGAGCAAATTGCTGTGCTCCAAAAGGCATTCAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 12:44 AM