ID:

dsi_29186

 Coordinate:

4:724576-724725 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.5 -14.3 -14.2

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GTATAAATAAAGCAAAATAAAGTGACCTATCAACTAAAAAGTTTTAACTGGTAAAAAAGTATTTTTTGCTATTAAAAATGTTAACATATGGTGGTTGGTCTAAAAACATTTAAAAGCATTATATTCTTAAATGTGTGAAATGAGCGCAATGAGCATACATATTAATGCCATATTGTTCCAAGGTTCAACTTCAACTAATTACTCCTTCCGAGTTGTTTATATTTTATGATTTAACAATTGCTAAAGCATA
*********************************************************************************.(((((((((((..((.((......(((((....(((((.........)))))...)))))........)).))..))........)))))).)))......******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR902009
testis
...........................................................................................................................................................TACATATTAATGCCATATTGTTCCAAGG................................................................... 28 0 1 5.00 5 3 1 1 0 0 0 0
.................................................................................TAACATATGGTGGTTGGTCTAAAAACA.............................................................................................................................................. 27 0 1 4.00 4 2 1 1 0 0 0 0
.......................................................................................................................TATATTCTTAAATGTGTGAAATGAGC......................................................................................................... 26 0 1 4.00 4 2 2 0 0 0 0 0
...............................................................................................................................TAAATGTGTGAAATGAGCGCAATGAGCA............................................................................................... 28 0 1 3.00 3 0 1 1 1 0 0 0
..............................................................................TGTTAACATATGGTGGTTGGTCTAAAAA................................................................................................................................................ 28 0 1 2.00 2 2 0 0 0 0 0 0
..............................................................................TGTTAACATATGGTGGTTGGTCTA.................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0
.................................................................................TAACATATGGTGGTTGGTCTAAAAACATT............................................................................................................................................ 29 0 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................................................TATTCTTAAATGTGTGAAATGAGC......................................................................................................... 24 0 1 2.00 2 0 0 0 1 1 0 0
.................................................................................TAACATATGGTGGTTGGTCT..................................................................................................................................................... 20 0 1 2.00 2 0 0 2 0 0 0 0
..............................................................................TGTTAACATATGGTGGTTGGTCTAAAA................................................................................................................................................. 27 0 1 2.00 2 1 1 0 0 0 0 0
................................................................................TTAACATATGGTGGTTGGTCTAAAAACA.............................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................................................................TATTAATGCCATATTGTTCCAAGGT.................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................ATATGGTGGTTGGTCTAAAAACATT............................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................TGAGCGCAATGAGCATACATATTAATGCCA................................................................................ 30 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................TGTTAACATATGGTGGTTGGTCTAAAAACA.............................................................................................................................................. 30 0 1 1.00 1 0 0 1 0 0 0 0
............................................................................................................................................TGAGCGCAATGAGCATACATATTAATGC.................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................AAATGTTAACATATGGTGGTTGGTC...................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................TTCCGAGTTGTTTATATTTTATGA..................... 24 0 1 1.00 1 0 1 0 0 0 0 0
................................................................................................................................................................................................................................TATGATTTAACAATTGCTAAAGCA.. 24 0 1 1.00 1 0 0 0 1 0 0 0
...................................................................................................................................TGTGTGAAATGAACGCAATGAGCATA............................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0 0
.................................................................................TAACATATGGTGGTTGGT....................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0
.................................................................................AAACATATGGTGGTTGGTCTAAAAACATT............................................................................................................................................ 29 1 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................................................................TGAGCATACATATTAATGCCATATTGT.......................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................TTGGTCTAAAAACATTTAAAAGCATT.................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................................................GTGTGAAATGAGCGCAATGAGCATACA........................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0
......................................................................................................................TTATATTCTTAAATGTGTGAAATGAGC......................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................TGGTCTAAAAACATTTAAAAGCATTATA............................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0
..................................................................................AACATATGGTGGTTGGTCTAAAAACATT............................................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................................................TGTGAAATGAGCGCAATGAGCATACA........................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................TACATATTAATGCCATATTGTTCCAAGGTT................................................................. 30 0 1 1.00 1 0 0 1 0 0 0 0
...............................................................................................................................TAAATGTGTGAAATGAGCGCAATGAGTA............................................................................................... 28 1 1 1.00 1 0 0 0 1 0 0 0
............................................................................AATGTTAACATATGGTGGTTGGTCTAAAAA................................................................................................................................................ 30 0 1 1.00 1 0 0 1 0 0 0 0
............................................................................................................................TCTTAAATGTGTGAAATGAGCGC....................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0
...........................TATCAACTAAAAAGTTTTAACTGG....................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0
.......................................................................TTAAAAATGTTAACATATGGTGGTTGGT....................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................TGTGTGAAATGAGCGCAATGAGCATA............................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0
...........................TATCAACTAAAAAGTTTTAACTGGT...................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTTTATGATTTAACAATTGCT........ 21 0 1 1.00 1 0 0 1 0 0 0 0
...............................................................................................................................................................TATTAATGCCATATTGTTCCAAGG................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0
...................................................................................ACATATGGTGCTTGGACT..................................................................................................................................................... 18 2 3 0.67 2 0 0 0 0 2 0 0
..........................................................................................................CATATAAAAGCATTAT................................................................................................................................ 16 1 7 0.14 1 0 0 0 0 1 0 0
.......................................................................................ATAGTGGTTGGTCTTAAA................................................................................................................................................. 18 2 9 0.11 1 0 1 0 0 0 0 0
...........................................................................................................................................................................ATTGGTCCAAGGTTC................................................................ 15 1 9 0.11 1 0 1 0 0 0 0 0
......................................................................................................AAAACATATAAAAGCATT.................................................................................................................................. 18 1 10 0.10 1 0 0 0 0 0 0 1
.........................................................................................................ACATATAAAAGCATTATG............................................................................................................................... 18 2 13 0.08 1 0 0 0 0 1 0 0
...................................................................................................................................................................................................................GTTGTTTGTATTTTATAATT................... 20 2 18 0.06 1 1 0 0 0 0 0 0
...................................................................................................................................................................................AAGGTTCCACGTCAAC....................................................... 16 2 20 0.05 1 1 0 0 0 0 0 0
................................................................................................................................................................................TCCTAGGTTCAACTCC.......................................................... 16 2 20 0.05 1 0 1 0 0 0 0 0

Anti-sense strand reads

CATATTTATTTCGTTTTATTTCACTGGATAGTTGATTTTTCAAAATTGACCATTTTTTCATAAAAAACGATAATTTTTACAATTGTATACCACCAACCAGATTTTTGTAAATTTTCGTAATATAAGAATTTACACACTTTACTCGCGTTACTCGTATGTATAATTACGGTATAACAAGGTTCCAAGTTGAAGTTGATTAATGAGGAAGGCTCAACAAATATAAAATACTAAATTGTTAACGATTTCGTAT
*******************************************************************.(((((((((((..((.((......(((((....(((((.........)))))...)))))........)).))..))........)))))).)))......********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
................................................................................................................................................................................AGGTTCCAAGTTGAAGTTGATT.................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................TGAGGAAGGCTTCACAAA................................ 18 2 1 1.00 1 0 1 0 0 0 0 0
.................................................................................................................................................................................GGTTCCAAGTTGATGTTC....................................................... 18 2 2 0.50 1 0 0 0 1 0 0 0
.............................AGTTGATGCTTCAAAATTGGC........................................................................................................................................................................................................ 21 3 3 0.33 1 0 0 1 0 0 0 0
.......................................................................................................................................................................................AAGTTGAAGTTGATTAGT................................................. 18 1 3 0.33 1 0 0 0 0 0 1 0
.................................................................................................................................................................................GGTTCCAAGTTGATG.......................................................... 15 1 5 0.20 1 0 0 0 0 1 0 0
...............................................................................................................................................................................AAGGTTCGAACTCGAAGTTGA...................................................... 21 3 5 0.20 1 0 0 0 0 0 0 1
..............................GTTGATGCTTCAAAATTG.......................................................................................................................................................................................................... 18 2 7 0.14 1 0 0 1 0 0 0 0
.................................................................................................................................................................................GGTTCCAAGTTGATGCT........................................................ 17 2 7 0.14 1 0 0 0 0 1 0 0
..................................................................................................................................................................................GTTCCAAGTTGATGCT........................................................ 16 2 20 0.10 2 1 0 0 0 0 1 0
.................................................................................................................................................................................GGTTCCAAGTTGATGC......................................................... 16 2 20 0.10 2 0 0 0 0 1 1 0
..................................................................................................................................................................................GTTCCAAGTTGATGT......................................................... 15 1 11 0.09 1 0 0 0 0 1 0 0
.........................................................TCAGAAAAAACGATTATATTT............................................................................................................................................................................ 21 3 18 0.06 1 0 0 1 0 0 0 0
..........................................................................................................................................................................ATCAGAAGGTTCCAAG................................................................ 16 2 20 0.05 1 0 1 0 0 0 0 0
.........................................................................................................................................................................GATCAGAAGGTTCCAAG................................................................ 17 3 20 0.05 1 0 1 0 0 0 0 0
..............................................................AAAAACGATGATTTTT............................................................................................................................................................................ 16 1 20 0.05 1 1 0 0 0 0 0 0
............................AAGTTGATCTTGCAAAATTG.......................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 4:724526-724775 - dsi_29186 GTATAAA-TAAAGCAAAATAAAGTGACC-------TATCAACT----------------------------------------------------------AAAAAGTTTTAACTGGTAA-AAAAGTATT-TTT-------------------TGCTATTAAAAATGTTAACATATGGTGGTTGGTCTAAAAACATTTAAAAGCATTATATTCTTAAATGTGTG--AA-ATGAGCGCAATGA----------GC-------------------ATACAT----ATTAATGCCATATTGTTCCAAGGTTC---A-------------ACTT---CAACTAATTACTCCTTCCGAGTTGTTTATATTT---TATGATTTAACAATTGCTAAAGCATA
droSec2 scaffold_30:632461-632709 - GTATAAA-TAAAGCAAAATAAAGTGACC-------TATCAACT----------------------------------------------------------AAAAAGTTTTAACTGGTAA-AAAAGTATTTTTT-------------------TGCTATTAAAAATGTTAACATATGGTGGTTGGTCTGAAAACATTTAAAAGCAATATATTCTTAAATGTGTG--AA-ATGAGCGCAATGA----------GC-------------------ATACAT----ATTAATGCCATATTGTTCCAAGGTTC---A-------------ACTT---CAACTAA--ACTCCTTCCGACTTGTTTATATTT---TATGATTTAACAATTGCTAAAGCATA
dm3 chr4:924776-925036 - GAATAAA-CAAAGCAAAATAAATTGACC-------TACCAACT----------------------------------------------------------ACAACATTTTAACTGGTAA-AAATATATTATTT-------------------TGTTATC-AAAATGTTAACATATGGTGGTTGGTCTACAAACATTTAAAACCCTTTAATTCTTAAATGTGTG--AA-AA-TACGCAATGT----------GCG-----------------------T----ATGAATCCAATATTGTTCCAAGGTCC---ATGAATATTGGTCGGCCTAAGCAGCTAAATACACCTACCGCGTTGTTTATATTT---CATGTTTTAACAATGCTTAAACCATA
droEre2 scaffold_4512:346942-347211 + AAATAAA-CAAATCGCAATAAATTGATTACGCATCTATCAACT----------------------------------------------------------AGAACATTTTTGCTGGTAA-AAAAGGATTACTTGGTTTTCAGCATAAAATTGTGCTCTTAAAAATATTTACAAATGGTGATTGGTCTA-AAACAAATAAAACCCTCATATTTTTAATTGTGTATAAG-AA-TACGCAATGTCGATAAAGGTGCGTTGAAATCTGTAATGTGCATACATAGATACGTATGGAATATTGTGCCAAGGTCTTTTAATAATATCAGTCAGCCTAAA--------------------------------------------------------------
droYak3 4:995220-995524 - GAATAAA-CAAAGCAAAATAAATTGATTACGCACCTATCAACC----------------------------------------------------------AGCAAATTTTTGCTGGGAAAAAAAGTATTATTTGTTCTTCAGCATAAAATTATGCTTCTAAAAATGTTTACAAATTGTGGT------AAAAACATTTAAAAATCTTATATT-TAACGTGTGTG--AGGAA-TACGCAATGACGATAAAGGTGCGTTGAAATCTGTAATATGCTTA---------------CATGTTGTGCCAAGGTCTTTTAAAAATATCGGTCAGCCTAAA---CCGTACATACATACATAGATATACATATGTATGTATATCTTCACAAC---ATAAATATC
droEle1 scf7180000491238:240240-240324 + ATTTAAA-AAACAGAAAACT---TGATTAGACATC----AATAA---------------------------------------------------------AATAAGTCGTAAGAGGTAA-AAACATA-------------------------------------------------------------AATACATATACAAACA-------------------------------------------------------------------------------------------TATACT--------------------------------------------------------------------------------------------G
droRho1 scf7180000770477:8332-8386 + ATTTGAA---AAGGAAAACAACTTGATT-------AATTATCA----------------------------------------------------------ATATTGTCTTGAAAGGTAA-AAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000394984:8892-9041 - GTAAAAAGTGAAACAAAACAAATATATG---TAAT----ATTAAAATATCTGATAAAAAAAGAGCTCAAAAAAAGCTTTGTTATAGGGTTGCATATCAATCAAAGTATGTTGATTTAAAA-AAATATATA-TTT-------------------AGCT------------------------------------------------------------------------------------------------------------------------------GTGTTTTG----------------CTTTTAAATATA---------------------------------------------------------------------------T

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTATAAA-TAAAGCAAAATAAAGTGACC-------TATCAACT----------------------------------------------------------AAAAAGTTTTAACTGGTAA-AAAAGTATT-TTT-------------------TGCTATTAAAAATGTTAACATATGGTGGTTGGTCTAAAAACATTTAAAAGCATTATATTCTTAAATGTGTG--AA-ATGAGCGCAATGA----------GC-------------------ATACAT----ATTAATGCCATATTGTTCCAAGGTTC---A-------------ACTT---CAACTAATTACTCCTTCCGAGTTGTTTATATTT---TATGATTTAACAATTGCTAAAGCATASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................TACAT----ATTAATGCCATATTGTTCCAAGG.........................................................................................2815.00500000003110000000
........................................................................................................................................................................TAACATATGGTGGTTGGTCTAAAAACA........................................................................................................................................................................................................2714.00400000002110000000
..............................................................................................................................................................................................................TATATTCTTAAATGTGTG--AA-ATGAGC................................................................................................................................................................2614.00400000002020000000
......................................................................................................................................................................................................................TAAATGTGTG--AA-ATGAGCGCAATGA----------GC-------------------A.........................................................................................................................2813.00300000010110000000
.....................................................................................................................................................................TGTTAACATATGGTGGTTGGTCTAAAAA..........................................................................................................................................................................................................2812.00200000002000000000
.....................................................................................................................................................................TGTTAACATATGGTGGTTGGTCTA..............................................................................................................................................................................................................2412.00200000002000000000
........................................................................................................................................................................TAACATATGGTGGTTGGTCTAAAAACATT......................................................................................................................................................................................................2912.00200000002000000000
................................................................................................................................................................................................................TATTCTTAAATGTGTG--AA-ATGAGC................................................................................................................................................................2412.00200000010001000000
........................................................................................................................................................................TAACATATGGTGGTTGGTCT...............................................................................................................................................................................................................2012.00200000000200000000
.....................................................................................................................................................................TGTTAACATATGGTGGTTGGTCTAAAA...........................................................................................................................................................................................................2712.00200000001010000000
.......................................................................................................................................................................TTAACATATGGTGGTTGGTCTAAAAACA........................................................................................................................................................................................................2811.00100000000010000000
......................................................................................................................................................................................................................................................................................T----ATTAATGCCATATTGTTCCAAGGT........................................................................................2511.00100000000010000000
............................................................................................................................................................................ATATGGTGGTTGGTCTAAAAACATT......................................................................................................................................................................................................2511.00100000001000000000
......................................................................................................................................................................................................................................TGAGCGCAATGA----------GC-------------------ATACAT----ATTAATGCCA......................................................................................................3011.00100000001000000000
.....................................................................................................................................................................TGTTAACATATGGTGGTTGGTCTAAAAACA........................................................................................................................................................................................................3011.00100000000100000000
......................................................................................................................................................................................................................................TGAGCGCAATGA----------GC-------------------ATACAT----ATTAATGC........................................................................................................2811.00100000001000000000
..................................................................................................................................................................AAATGTTAACATATGGTGGTTGGTC................................................................................................................................................................................................................2511.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................TTCCGAGTTGTTTATATTT---TATGA.....................2411.00100000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................TATGATTTAACAATTGCTAAAGCA..2411.00100000010000000000
........................................................................................................................................................................TAACATATGGTGGTTGGT.................................................................................................................................................................................................................1811.00100000000000100000
...............................................................................................................................................................................................................................................TGA----------GC-------------------ATACAT----ATTAATGCCATATTGT................................................................................................2711.00100000000010000000
.....................................................................................................................................................................................TTGGTCTAAAAACATTTAAAAGCATT............................................................................................................................................................................................2611.00100000000100000000
...........................................................................................................................................................................................................................GTGTG--AA-ATGAGCGCAATGA----------GC-------------------ATACA.....................................................................................................................2711.00100000000001000000
.............................................................................................................................................................................................................TTATATTCTTAAATGTGTG--AA-ATGAGC................................................................................................................................................................2711.00100000000010000000
......................................................................................................................................................................................TGGTCTAAAAACATTTAAAAGCATTATA.........................................................................................................................................................................................2811.00100000000100000000
.........................................................................................................................................................................AACATATGGTGGTTGGTCTAAAAACATT......................................................................................................................................................................................................2811.00100000000010000000
............................................................................................................................................................................................................................TGTG--AA-ATGAGCGCAATGA----------GC-------------------ATACA.....................................................................................................................2611.00100000001000000000
..................................................................................................................................................................................................................................................................................TACAT----ATTAATGCCATATTGTTCCAAGGTT.......................................................................................3011.00100000000100000000
...................................................................................................................................................................AATGTTAACATATGGTGGTTGGTCTAAAAA..........................................................................................................................................................................................................3011.00100000000100000000
...................................................................................................................................................................................................................TCTTAAATGTGTG--AA-ATGAGCGC..............................................................................................................................................................2311.00100000000010000000
...................................TATCAACT----------------------------------------------------------AAAAAGTTTTAACTGG......................................................................................................................................................................................................................................................................................2411.00100000000010000000
..............................................................................................................................................................TTAAAAATGTTAACATATGGTGGTTGGT.................................................................................................................................................................................................................2811.00100000001000000000
..........................................................................................................................................................................................................................TGTGTG--AA-ATGAGCGCAATGA----------GC-------------------ATA.......................................................................................................................2611.00100000001000000000
...................................TATCAACT----------------------------------------------------------AAAAAGTTTTAACTGGT.....................................................................................................................................................................................................................................................................................2511.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................TTT---TATGATTTAACAATTGCT........2111.00100000000100000000
......................................................................................................................................................................................................................................................................................T----ATTAATGCCATATTGTTCCAAGG.........................................................................................2411.00100000000100000000
droSec2
GTATAAA-TAAAGCAAAATAAAGTGACC-------TATCAACT----------------------------------------------------------AAAAAGTTTTAACTGGTAA-AAAAGTATTTTTT-------------------TGCTATTAAAAATGTTAACATATGGTGGTTGGTCTGAAAACATTTAAAAGCAATATATTCTTAAATGTGTG--AA-ATGAGCGCAATGA----------GC-------------------ATACAT----ATTAATGCCATATTGTTCCAAGGTTC---A-------------ACTT---CAACTAA--ACTCCTTCCGACTTGTTTATATTT---TATGATTTAACAATTGCTAAAGCATASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................TGTG--AA-ATGAGCGCAATGA----------G..............................................................................................................................................2011.0010001
dm3
GAATAAA-CAAAGCAAAATAAATTGACC-------TACCAACT----------------------------------------------------------ACAACATTTTAACTGGTAA-AAATATATTATTT-------------------TGTTATC-AAAATGTTAACATATGGTGGTTGGTCTACAAACATTTAAAACCCTTTAATTCTTAAATGTGTG--AA-AA-TACGCAATGT----------GCG-----------------------T----ATGAATCCAATATTGTTCCAAGGTCC---ATGAATATTGGTCGGCCTAAGCAGCTAAATACACCTACCGCGTTGTTTATATTT---CATGTTTTAACAATGCTTAAACCATASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................................TCC---ATGAATATTGGTCGGCCTAAGCAGC..........................................................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
....................................................................................................................................................................................................................................................................................................................C---ATGAATATTGGTCGGCCTAAGCAGC..........................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000400000
.........................................................................................................................................................................................................................................................................................................................................TAAGCAGCTAAATACACCTACCGCGT........................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000400000
.......................................................................................................................................................................TTAACATATGGTGGTTGGTCT...............................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020
.............................................................................................................................................................................................................................................................................................................................TATTGGTCGGCCTAAGCAGCTAAA......................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000200000
...TAAA-CAAAGCAAAATAAATTGACC-------TAC.....................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................TATTGGTCGGCCTAAGCAGCTAAATA....................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.............................................................................................................................................................................................................................................................................................................................TATTGGTCGGCCTAAGCAGCTAAAA.....................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.................................................................................................................................................................................................................................................................................................................................................TAAATACACCTACCGCGTTGTTTATA................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................ATTGGTCGGCCTAAGCAGCTA........................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
................................................................................................................................................................................................................................................................................................TCCAATATTGTTCCAAGGTCC---ATGAATA............................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................TCCAAGGTCC---ATGAATATTGGTCGGCC..................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
..............................................................................................................................................................................................................................................................................................................................ATTGGTCGGCCTAAGCAGCTAA.......................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100
...........................................................................................................................................................................................................................................................................................................................................AGCAGCTAAATACACCTACCGCGTTGTT....................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................GCTAAATACACCTACCGCGTTGTTTA..................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................CATTTTAACTGGTAA-AAATA.............................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GCAAAATAAATTGACC-------TA......................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................GTCTACAAACATTTAAAACCCTTTAATTC......................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TAAATACACCTACCGCGTTGTTTATAT...............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................TGACC-------TACCAACT----------------------------------------------------------ACAACATT..............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................CTAAGCAGCTAAATACACCTACCGCGT........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................TAACATATGGTGGTTGGTC................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
........................................................................................................................................................................................................................................................................................................TGTTCCAAGGTCC---ATGAATAT...........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..............................................................................................................................................................................................................................................................................................................................ATTGGTCGGCCTAAGCAGC..........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................GCTAAATACACCTACCGCGTTGTT....................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................ATATTGGTCGGCCTAAGCAGCTAAATA....................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
............................................................................................................................................................................................................................................................................................................................................GCAGCTAAATACACCTACCGCGTTGTT....................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................AGCTAAATACACCTACCGCGTTGTT....................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................TAAATACACCTACCGCGTTGTTTATATT..............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................AAATGTGTG--AA-AA-TACGCAATGT----------GCC-----------------------.....................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................TATGGTGGTTGGTCTACA............................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TAACATATGGTGGTTGGTCTAC.............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................GTTAACATATGGTGGTTGGTC................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTGTTTATATTT---CATGTTTTAACAATGC..........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TGTTAACATATGGTGGTTGGT.................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....AA-CAAAGCAAAATAAATTGACC-------TACCAAC.................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CGCGTTGTTTATATTT---CATGTTT...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GAATATTGGTCGGCCTAAGCAGCTAAA......................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................TGAATATTGGTCGGCCTAAGCAGC..........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................TTAAAACCCTTTAATTCTTA...................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CC-------TACCAACT----------------------------------------------------------ACAACATTTTAACTG.......................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................CTAAATACACCTACCGCGTTAA.....................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TCGGCCTAAGCAGCTAAATACACCTACCGC..........................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATAAATTGACC-------TACCAAC.................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AATTGACC-------TACCAACT----------------------------------------------------------ACAACATTTT............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TTGACC-------TACCAACT----------------------------------------------------------ACAACAT...............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................ATACACCTACCGCGTTGTTTATATT..............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............CAAAATAAATTGACC-------TACCAACT----------------------------------------------------------......................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TGTTTATATTT---CATGTTTTAACAATGCC.........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TTGGTCTACAAACATTTAAAACCCTT............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................ATGAATATTGGTCGGCCTAAGCAGC..........................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................TATTGGTCGGCCTAAGCAGCTAA.......................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.............................................................................................................................................................................................................................................................................................................................................................CCGCGTTGTTTATATTT---CATG......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................ATATTGGTCGGCCTAAGCAG...........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TAAATGTGTG--AA-AA-TACGCAATGT----------GC.............................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................CAATGT----------GCG-----------------------T----ATGAATCCAAT.....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
......................TTGACC-------TACCAACT----------------------------------------------------------ACAACATTTTAAC.........................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................ACT----------------------------------------------------------ACAACATTTTAACTGGTAA-AAATA.............................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................T----ATGAATCCAATATTGTTCCAAGGTCC---ATG................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................AATATTGGTCGGCCTAAGCAGCTAAAT.....................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................GACC-------TACCAACT----------------------------------------------------------ACAACATTTTAAA.........................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TTTAATTCTTAAATGTGTG--A........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TTCCAAGGTCC---ATGAATATTGGT.......................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
........................................................................................................................................................................................................................................................................................................................................CTAAGCAGCTAAATACACC................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......A-CAAAGCAAAATAAATTGAC................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AAAGCAAAATAAATTGACC-------TACCAAC.................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATTGACC-------TACCAACT----------------------------------------------------------ACAACATTTTAACT........................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................ACCTACCGCGTTGTTTATATTT---C.........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TGGTCGGCCTAAGCAGCTAAATACACC................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................TTAACATATGGTGGTTGGTC................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................CCAAGGTCC---ATGAATATTGGTCGGCC..................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................AATAAATTGACC-------TACCAACT----------------------------------------------------------ACAAC.................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................CCTACCGCGTTGTTTATATT..............................2011.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................ATATTGGTCGGCCTAAGCAGCTAAA......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
............................................................................................................................................................................................................................................................................................................................ATATTGGTCGGCCTAAGC.............................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................ATTGGTCGGCCTAAGCAG...........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................TACACCTACCGCGTTGTTTATATTT---C.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................CC---ATGAATATTGGTCGGCCTAAGCAGC..........................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................TAAATTGACC-------TACCAACT----------------------------------------------------------ACAACATT..............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CGCGTTGTTTATATTT---CATG......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................ATTGGTCGGCCTAAGCAGCT.........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
................................................................................................................................................................................................................................................................................................TCCAATATTGTTCCAAGGTC.......................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
...................................TACCAACT----------------------------------------------------------ACAACATTTTAAAAA.......................................................................................................................................................................................................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AAATAAA-CAAATCGCAATAAATTGATTACGCATCTATCAACT----------------------------------------------------------AGAACATTTTTGCTGGTAA-AAAAGGATTACTTGGTTTTCAGCATAAAATTGTGCTCTTAAAAATATTTACAAATGGTGATTGGTCTA-AAACAAATAAAACCCTCATATTTTTAATTGTGTATAAG-AA-TACGCAATGTCGATAAAGGTGCGTTGAAATCTGTAATGTGCATACATAGATACGTATGGAATATTGTGCCAAGGTCTTTTAATAATATCAGTCAGCCTAAA--------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
GAATAAA-CAAAGCAAAATAAATTGATTACGCACCTATCAACC----------------------------------------------------------AGCAAATTTTTGCTGGGAAAAAAAGTATTATTTGTTCTTCAGCATAAAATTATGCTTCTAAAAATGTTTACAAATTGTGGT------AAAAACATTTAAAAATCTTATATT-TAACGTGTGTG--AGGAA-TACGCAATGACGATAAAGGTGCGTTGAAATCTGTAATATGCTTA---------------CATGTTGTGCCAAGGTCTTTTAAAAATATCGGTCAGCCTAAA---CCGTACATACATACATAGATATACATATGTATGTATATCTTCACAAC---ATAAATATCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................ATATGTATGTATATCTTCACAAC---.........2311.00100100000000
droEle1
ATTTAAA-AAACAGAAAACT---TGATTAGACATC----AATAA---------------------------------------------------------AATAAGTCGTAAGAGGTAA-AAACATA-------------------------------------------------------------AATACATATACAAACA-------------------------------------------------------------------------------------------TATACT--------------------------------------------------------------------------------------------GSizeHit CountTotal NormTotal
No Reads
droRho1
ATTTGAA---AAGGAAAACAACTTGATT-------AATTATCA----------------------------------------------------------ATATTGTCTTGAAAGGTAA-AAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBip1
GTAAAAAGTGAAACAAAACAAATATATG---TAAT----ATTAAAATATCTGATAAAAAAAGAGCTCAAAAAAAGCTTTGTTATAGGGTTGCATATCAATCAAAGTATGTTGATTTAAAA-AAATATATA-TTT-------------------AGCT------------------------------------------------------------------------------------------------------------------------------GTGTTTTG----------------CTTTTAAATATA---------------------------------------------------------------------------TSizeHit CountTotal NormTotal
No Reads

Generated: 05/19/2015 at 04:19 AM