ID:

dsi_29166

 Coordinate:

2r:5792688-5792922 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-44.8 -44.2 -44.2

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AACGTGGAGCGAACAGCATCGCGTTGGAAGCAATAAAAATAAATAAAAATGTGAGTATTATAGATATGGTAGGCGACCCGTGAATGCAGCGAATATAACTGCGAATCGAGTTCTACTGGCTTGTTTGCAGAACTCAATGTTGCAAGATTAATTTGTGATGCGCAAGGAAATGCACTTCACCGATTGCAACTCAAATTGCAGTCACGTGGTCGAGAATCCATTGCAGTCTCAACAAATTAACAATTAAAAAAGAACGTTACCTAAACGATGCGTTTGCTTATATTGCAGGTGAATCTATGATTACTAGCCGCTGCGTTGAAGCGCTGGCAATTGTG
**********************************************************************************..(((((((.......(((((((.((((((.....))))))))))))).......)))))))......((((((((.(((((((((........((((.((((((((......))))))))..)))).......))).)))).)).)).))))))************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M025
embryo
 M023
head
 GSM343915
embryo
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 O001
Testis
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
..................................................................................AATGCAGCGAATATAACT........................................................................................................................................................................................................................................... 18 0 1 36.00 36 31 0 0 3 1 1 0 0 0 0 0 0 0
..................................................................................AATGCAGCGAATATAACTG.......................................................................................................................................................................................................................................... 19 0 1 24.00 24 2 17 4 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................ATCCATTGCAGTCTCAACAAAT.................................................................................................. 22 0 1 12.00 12 2 5 0 3 0 0 2 0 0 0 0 0 0
......................................................................................................................................................................................................................AATCCATTGCAGTCTCAACAAAT.................................................................................................. 23 0 1 10.00 10 0 1 0 1 0 6 2 0 0 0 0 0 0
...........................................................................................................................................................................................................................ATTGCAGTCTCAACAAAT.................................................................................................. 18 0 1 9.00 9 7 0 0 0 0 1 0 0 1 0 0 0 0
..............AGCATCGCGTTGGAAGCA............................................................................................................................................................................................................................................................................................................... 18 0 1 8.00 8 0 1 7 0 0 0 0 0 0 0 0 0 0
..................................................................................AATGCAGCGAATATAACTGC......................................................................................................................................................................................................................................... 20 0 1 6.00 6 5 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TCCATTGCAGTCTCAACAAAT.................................................................................................. 21 0 1 5.00 5 1 3 0 0 0 1 0 0 0 0 0 0 0
..................................................................................AATGCAGCGAATATAACTGCGAATCGAG................................................................................................................................................................................................................................. 28 0 1 5.00 5 0 0 0 0 5 0 0 0 0 0 0 0 0
.............................................................................................................................TGCAGAACTCAATGTTGC................................................................................................................................................................................................ 18 0 1 4.00 4 0 3 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................CCATTGCAGTCTCAACAAAT.................................................................................................. 20 0 1 4.00 4 0 2 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GTTGCAAGATTAATTTGTGATGCGC............................................................................................................................................................................ 25 0 1 4.00 4 1 0 0 2 0 0 0 0 1 0 0 0 0
...GTGGAGCGAACAGCATCG.......................................................................................................................................................................................................................................................................................................................... 18 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GAATCCATTGCAGTCTCAACAAAT.................................................................................................. 24 0 1 4.00 4 1 0 0 0 1 1 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................CATTGCAGTCTCAACAAAT.................................................................................................. 19 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AATCCATTGCAGTCTCAAC...................................................................................................... 19 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................AGAACTCAATGTTGCAAGA............................................................................................................................................................................................ 19 0 1 3.00 3 0 2 0 0 0 0 0 0 0 1 0 0 0
............ACAGCATCGCGTTGGAAGC................................................................................................................................................................................................................................................................................................................ 19 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0
...........AACAGCATCGCGTTGGAAGC................................................................................................................................................................................................................................................................................................................ 20 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TTGTTTGCAGAACTCAATGTTGC................................................................................................................................................................................................ 23 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0
.............CAGCATCGCGTTGGAAGC................................................................................................................................................................................................................................................................................................................ 18 0 1 3.00 3 0 2 1 0 0 0 0 0 0 0 0 0 0
................................................................................................AACTGCGAATCGAGTTCT............................................................................................................................................................................................................................. 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................AATGCAGCGAATATAAC............................................................................................................................................................................................................................................ 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTGCAGAACTCAATGTTGC................................................................................................................................................................................................ 19 0 1 2.00 2 0 0 0 0 1 0 0 1 0 0 0 0 0
.................................................................................................ACTGCGAATCGAGTTCTACTG......................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 1 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................TGCAAGATTAATTTGTGATGC.............................................................................................................................................................................. 21 0 1 2.00 2 0 0 0 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................ACTTCACCGATTGCAACTC............................................................................................................................................... 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
..................................................................................AATGCAGCGAATATAACTGCGAATCGA.................................................................................................................................................................................................................................. 27 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................................GAATGCAGCGAATATAACTG.......................................................................................................................................................................................................................................... 20 0 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0
.............................................................................................................................................................................................CTCAAATTGCAGTCACGTGGTC............................................................................................................................ 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AATGTTGCAAGATTAATTTGTGATGCGCA........................................................................................................................................................................... 29 0 1 2.00 2 0 0 0 0 1 0 1 0 0 0 0 0 0
..................................................................................................................ACTGGCTTGTTTGCA.............................................................................................................................................................................................................. 15 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0
............................................................................................................................................................................................................................TTGCAGTCTCAACAAAT.................................................................................................. 17 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0
............................................................................................................................TTGCAGAACTCAATTTTGC................................................................................................................................................................................................ 19 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
..................................................................................AATGCAGCGAATATA.............................................................................................................................................................................................................................................. 15 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................CAGAACTCAATGTTGCAAGATT.......................................................................................................................................................................................... 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GCAAGATTAATTTGTGAT................................................................................................................................................................................ 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................ATAACTGCGAATCGAG................................................................................................................................................................................................................................. 16 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................ACTTCACCGATTGCAAC................................................................................................................................................. 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................ATGCAGCGAATATAACTG.......................................................................................................................................................................................................................................... 18 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................ATGCAGCGAATATAACT........................................................................................................................................................................................................................................... 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..........GAACAGCATCGCGTTGGAAGC................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................TGCAAGATTAATTTGTGATGCGC............................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGCAAGATTAATTTGTGA................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................ATGCAGCGAATATAAC............................................................................................................................................................................................................................................ 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GTTTGCAGAACTCAATGTTGCAAGAT........................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................AATGCAGCGAATATAACTGCGT....................................................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TGGCTTGTTTGCAGAACT......................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................AATGCACTTCACCGATTGC.................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................CGAATATAACTGCGAATCGA.................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................GATTAATTTGTGATGCGCAAGGA....................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....GGAGCGAACAGCATCGCGTTGGAA.................................................................................................................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................AGAACTCAATGTTGCAAGATT.......................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GTCACGTGGTCGAGAATCCATTGC............................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................GCGAATCGAGTTCTACT.......................................................................................................................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TGGGATGCGCAAGGAA...................................................................................................................................................................... 16 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................CGTTGGAAGCAATAAAAA........................................................................................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................AGTATTATAGATATGGTAGGC..................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................TAACTGCGAATCGAG................................................................................................................................................................................................................................. 15 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................CTGGCTTGTTTGCAGAACTC........................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GAATCGAGTTCTACTGGC....................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................AAGATTAATTTGTGATGCGC............................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................ACTGGCTTGTTTGCAGAA........................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...GTGGAGCGAACAGCATCGCG........................................................................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ACTCAAATTGCAGTCACGTGGTCG........................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................TTAAAAAAGAACGTTACCT......................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................CAGAACTCAATGTTGCAAG............................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CACGTGGTCGAGAATCCATTGCAGTCTC......................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................AATTGCAGTCACGTGGTCGA.......................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................AACTCAAATTGCAGTCACGTGGTCGAG......................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................GTGAGTATTATAGATATGGTAGGC..................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................AGAACTCAATGTTGCAAGAT........................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CACGTGGTCGAGAATCCA................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................TCGCGTTGGAAGCAATAAAA......................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................AGATTAATTTGTGATGCGC............................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............CAGCATCGCGTTGGAAGCAA.............................................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTTCTACTGGCTTGTTTGCAGA............................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................TAACTGCGAATCGAGT................................................................................................................................................................................................................................ 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTTCTACTGGCTTTTTTTCCGA............................................................................................................................................................................................................ 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GTTGCATGATGAATTTGGGATGCGC............................................................................................................................................................................ 25 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................CTGGCTTGTTTGCAGAACT......................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................ATTTGTGATGCGCAAGGAA...................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................CTCAATGTTGCAAGATTAATTTGTG.................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............AGCATCGCGTTGGAAGCAATAAAA......................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................CAGAACTCAATGTTGCAAGATTAAT....................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................GTGATGCGCAAGGAAATG................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................CCTAAACGATGCGTTTGC.......................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................................................................................................TCTATGATTACTAGCCGC........................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GTTGCAAGATTAATTTGTGAT................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................AATGCAGCGAATATGACT........................................................................................................................................................................................................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................AATCGAGTTCTACTGGCTT..................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................AATGTTGCAAGATTAATTTGTGATGCGC............................................................................................................................................................................ 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AATCACGTGGTCGAGAATCC.................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..CGTGGAGCGAACAGCATCGC......................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..............AGCATCGCGTTGGAAGCAA.............................................................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GTTGCAAGATTAATTTGTGATGCG............................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....TGGAGCGAACAGCATCGCGTTGGAAGCAA.............................................................................................................................................................................................................................................................................................................. 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................GAACTCAATGTTGCAAGATT.......................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...GTGGAGCGAACAGCATC........................................................................................................................................................................................................................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................AATGTGAGTATTATAGATATGGTAGGG..................................................................................................................................................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................TGTGAGTATTATAGATATGGTAGGG..................................................................................................................................................................................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ACATTGCAGTCTCAACAAAT.................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................ATGTTGCAAGATTAATTTGTGATGCGCA........................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TCGAGAATCCATTGCAGTCTC......................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................ATGCAGCGAATATAACTGCGAATCGAG................................................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....TGGAGCGAACAGCATC........................................................................................................................................................................................................................................................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TGGCTTGTTTGCAGAACTCAATGTTGCAA.............................................................................................................................................................................................. 29 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CACGTGGTCGAGAATCCATTGCAGTCT.......................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AATGTTGCAAGATTAATTTGTGA................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................GGAAATGCACTTCACCGATTGC.................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................TACTAGCCGCTGCGTTGAAGCGCTGG........ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................ATTACTAGCCGCTGCGTTGAAGCGC........... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........AACAGCATCGCGTTGGAAGCAA.............................................................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................ATCCATTGCAGTCTCAACA..................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGCAAGATTAATTTGTGATGCGCAAGGA....................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................TCTATGATTACTAGCCGCTGCGTTGA................ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................................................................................TGTGAATCTATGATTACTAGCCGCTGCGT................... 29 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................TGCAGAACTCAATGTTGCAAGATTAAT....................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................CTTCACCGATTGCAACTCAAATTGCA....................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CCATTGCAGTCTCAACAAGT.................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............ACAGCATCGCGTTGGAAGCAA.............................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................GTGGTCGAGAATCCA................................................................................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TCAAATTGCAGTCACG................................................................................................................................. 16 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................ATCGAGTTCTACTGGCTTTTTTT................................................................................................................................................................................................................ 23 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................TTGGAAGCAATAAAAATAAATAAAAATG............................................................................................................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................TATGATTACTAGCCGCTGCGTTGAAG.............. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................................ATTTGTGATGCGCAAGGAAATG................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGAATCCATTGCAGTCTCAACAAAT.................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................GAATCCATTGCAGTCTCAACAAATT................................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................AATTGCAGTCACGTGGTCGAGA........................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TTGCAAGATTAATTTGTGATGCGC............................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................GTTGCAAGATTAATTTGTGATGCGCA........................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................CCGCTGCGTTGAAGCG............ 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............CAGCATCGCGTTGGAAGCA............................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............GCATCGCGTTGGAAGCAATA............................................................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................GAAATGCACTTCACCGATTG..................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................AACTCAAATTGCAGTCACG................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................AACTGCGAATCGAGTT............................................................................................................................................................................................................................... 16 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CCATTGCAGTCTTCACAAAT.................................................................................................. 20 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................TACCTCAAGGATGCGTTTCC.......................................................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................GCTTGCAACTCAAATCGCTGT..................................................................................................................................... 21 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGCAAGATCAATTTGGGA................................................................................................................................................................................. 18 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................GAAAGATTAATTGGTGACGC.............................................................................................................................................................................. 20 3 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................TGGGATGCGCAAGGA....................................................................................................................................................................... 15 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................................................................................................................TCCGTTGTAGCGCTGGC....... 17 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 1
....................................................................................................................................................TAATTAGTGATGCGCA........................................................................................................................................................................... 16 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CTGGCTTGTTTGCAAA............................................................................................................................................................................................................ 16 1 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1 0 0
........................TGGAAGGAAAAAAAATAAGTAA................................................................................................................................................................................................................................................................................................. 22 3 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................GAAGCGCTGGCATTTG.. 16 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................CCTTATCTTGCAGGTGA........................................... 17 2 18 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................CAACTCATATGGCAGTCCC.................................................................................................................................. 19 3 19 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................TTGTACATATGGTAGGAGA................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.......................................................................................................................................................TTAGTGACGCGCAAGGTA...................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............GCATCGCGTTGGCAG................................................................................................................................................................................................................................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

TTGCACCTCGCTTGTCGTAGCGCAACCTTCGTTATTTTTATTTATTTTTACACTCATAATATCTATACCATCCGCTGGGCACTTACGTCGCTTATATTGACGCTTAGCTCAAGATGACCGAACAAACGTCTTGAGTTACAACGTTCTAATTAAACACTACGCGTTCCTTTACGTGAAGTGGCTAACGTTGAGTTTAACGTCAGTGCACCAGCTCTTAGGTAACGTCAGAGTTGTTTAATTGTTAATTTTTTCTTGCAATGGATTTGCTACGCAAACGAATATAACGTCCACTTAGATACTAATGATCGGCGACGCAACTTCGCGACCGTTAACAC
**************************************************************************************************..(((((((.......(((((((.((((((.....))))))))))))).......)))))))......((((((((.(((((((((........((((.((((((((......))))))))..)))).......))).)))).)).)).))))))********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
...........................................................................................................CTCAAGATGACAGCACCAACGT.............................................................................................................................................................................................................. 22 3 1 2.00 2 2 0 0 0 0
...............................................................................................ATTGACGCTTAGCTCAAGATG........................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................................................................................................................TCGACGCAACTGCGCGAACG....... 20 3 6 0.17 1 0 1 0 0 0
........................................................................................................................................................................................................................................................TTGCTTGCTATGGATTTCCT................................................................... 20 3 7 0.14 1 1 0 0 0 0
............................................................................................................TCAAGACGACAGAACAAA................................................................................................................................................................................................................. 18 2 9 0.11 1 0 0 1 0 0
...............................................................................................................................................................................................................CCAGCGCTTAGGTAA................................................................................................................. 15 1 13 0.08 1 0 1 0 0 0
..................................................................ACCACCCGCTGGGGCCTTA.......................................................................................................................................................................................................................................................... 19 3 15 0.07 1 1 0 0 0 0
.................................................................................................................................................................................................................................................TCTATTTTTTCTTGCAAT............................................................................ 18 2 16 0.06 1 1 0 0 0 0
.....CCTCACTTCTCGCAGCGCA....................................................................................................................................................................................................................................................................................................................... 19 3 16 0.06 1 0 0 0 0 1
....................................................................................................................................................................................................................................................................................................TAGATGCTAATGATCGCTG........................ 19 3 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................................................................................CAAGGGATTGGCTACG................................................................ 16 2 20 0.05 1 0 1 0 0 0
...................................................................................................................................................................................................................................................................................................TTAGGTGCTAATGATC............................ 16 2 20 0.05 1 0 0 0 1 0
......................................................................TCCGCTGGGGACTTCC......................................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 1 0

Generated: 04/23/2015 at 11:07 PM