ID:

dsi_29074

 Coordinate:

x:19810307-19810456 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.4 -2.2 -2.0

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ATTAATCAGTCGCGTAGGCTAAGTCCATTTATTGCACCCCGACCATTGACTGTTTTAATATTTTCGTTTGTTTATTCACCCGCCTAATTTGTGTTGTTTACGTTTTTGTATTTTATCTTATCTCCCCCTTATGCTTTCCATTCGATTCGAAACCCTGCTTTTGTGGCTAACCAACTGCTTGCGCACTGCTTTGCCGACAGACCCAGAGGTGGGCCATAACGCATACGCCCCGAATGCCCCGAGTGCCCCG
***************************************************.........................(((..((....((((.((((...........((((...................))))........)))).)))).....))....)))************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
............................................................................................................................................TTCGATTCGAAACCCTGCTTTTGTG..................................................................................... 25 0 1 2.00 2 0 2 0 0 0
.....TCAATCGCGTAGGCTAAGTCCATTTATA......................................................................................................................................................................................................................... 28 2 1 2.00 2 2 0 0 0 0
..............................................TGACTGTTTTAATATTTTCGTTTG.................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
.........................................................................................................................................................................................................CCCATAGGTGGGGGATAACG............................. 20 3 2 1.00 2 2 0 0 0 0
...........................TTTATTGCAACCCGACCATTGACTGTT.................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................GCCCAGAGGTGGGGGATAACGCA........................... 23 3 1 1.00 1 0 0 1 0 0
...................................................................................................................................................................................TGCGCACTGCTTTGCCGACAGACCCAGA........................................... 28 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................ATGCTTTCCATTCGATTCGAA................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
...................................................GTTTTAATATTTTCGTTTGTT.................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
.....................................................................................AATTTGTGTTGCTTACGTTGT................................................................................................................................................ 21 2 2 0.50 1 0 0 0 0 1
...................................................................................CTAATTTGTGTTGTT........................................................................................................................................................ 15 0 2 0.50 1 0 0 0 1 0

Anti-sense strand reads

TAATTAGTCAGCGCATCCGATTCAGGTAAATAACGTGGGGCTGGTAACTGACAAAATTATAAAAGCAAACAAATAAGTGGGCGGATTAAACACAACAAATGCAAAAACATAAAATAGAATAGAGGGGGAATACGAAAGGTAAGCTAAGCTTTGGGACGAAAACACCGATTGGTTGACGAACGCGTGACGAAACGGCTGTCTGGGTCTCCACCCGGTATTGCGTATGCGGGGCTTACGGGGCTCACGGGGC
*************************************************************************************.........................(((..((....((((.((((...........((((...................))))........)))).)))).....))....)))*************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
.........................................................................................................................................................................................GACGAAACGGCTGTCTGGGTC............................................ 21 0 1 2.00 2 2 0 0 0 0 0
.....................................GGGCTGGTAACTGACAAAATT................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0
....................................TGGGCTGGTAACTGACAAAATTAT.............................................................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................GGAATACGAAAGGTAAGCTAAGCT.................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
..................................GTTGGGCTGGTAACTGACAAAA.................................................................................................................................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0
.....................TCAGGTAAATAACGTTGGGCT................................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
................CCGATTCAGGTAAATAACGTTGGGC................................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................GGGGGAAGAAGAAAGGTAAGGT......................................................................................................... 22 3 3 0.67 2 0 0 2 0 0 0
.....................................................................................................................................................................................GCATGGCGAAACAGCTGTCT................................................. 20 3 2 0.50 1 0 0 0 1 0 0
.........................................................................................................................................GGTACGCTAAGCTTT.................................................................................................. 15 1 10 0.50 5 4 0 0 0 0 1
.......................AGGTGAAAAACGTGGGGCT................................................................................................................................................................................................................ 19 2 3 0.33 1 1 0 0 0 0 0
...........................................................................................................................GGGGGAAGAGGAAAGGTAAGGT......................................................................................................... 22 3 7 0.14 1 0 0 1 0 0 0
..................................................................................................................................................................................................................................CGCGGCTTACGGAGCGCACG.... 20 3 8 0.13 1 0 0 0 0 1 0
...........................................................................................................................GAGGGACTACGAAATGTAAG........................................................................................................... 20 3 11 0.09 1 0 0 1 0 0 0
...................................................................................................................AGATTAGAGGGTGAATAAG.................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:19810257-19810506 - dsi_29074 AT----------------------T--AATCAGTCG---------------------------------------------CG-TA-GGCTAAGTC-CATTTATTGC------ACCCCGA-----CCATTG-------AC-----T------------------------GTTTTAATATTTTCG-------TT-TGTTT-------------------------ATTCACCCGCCTAA-------TTTGTGTT-GTTTACG--------------------------------------TTTTTGTAT----------------TTTATCTTATCTCCC--CCTTATGCTTT---------------------CC--ATT-CGATTCGAA------A--CCCTGCTTTTGTGGCTAACC------------AAC----------TGCTTG-C--------------------------GCAC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CAGACC-CAGAGGTG---GGC---C---------ATAACGCATAC---------GCCCCGAATGCCCCGAGTGCCCCG
droSec2 scaffold_8:3385463-3385713 - AT----------------------T--AATCAATCG---------------------------------------------CG-AAGGGCTACGTC-CATTTATTGC------AACCCGC-----CCATTG-------AC-----T------------------------GTTTTAATATTTTCG-------TT-TGTTT-------------------------ATTCACCCGCCTAA-------TTTGTGTG-GTTTACG--------------------------------------TTTTTGTAT----------------TTTATCTTATCTCCC--CCTTATGCTTT---------------------CC--ATT-CGATTCGAA------A--CCCTGCTTTTGTGGCTAACC------------AAC----------TGCTTG-C--------------------------GCAC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CAGACC-CAGAGGTG---GGC---C---------ATAACGCATAC---------GCCCCGAATGCCCCGAGTGCCCCG
dm3 chrX:21077559-21077825 - AT----------------------T--AATCAATCG---------------------------------------------CG-TA-GGCTAAGTC-CATTGATTGC------AACCCGA-----CCATTG-------ACA----T------------------------TTTTTAATATTTTCG-------TT-TGTTT-------------------------ATCCACCCGCCTAA-------TTTGTGTTTGTTTACGTTTTT---------------------------------TTTTTGTAT----------------TTTATCTTATCTCCC--CCTTATGCTTT---------------------CC--ATT-CGATTCGAA------A-CCCTCGCTTTTGTGGCTAACC------------AAC----------TGCTTG-C--------------------------GCAC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CATACC-CAGAGGTG---AGC---C---------ATAACGCATACGCCCCGAATGCCCCAAGTGCCCCGAGTGCCCCG
droEre2 scaffold_4690:17608360-17608610 - AT----------------------T--AATCAATCG---------------------------------------------CG-TA-GGCTAAGTC-CATTGATTGT------AACCCGAGCGACCCATTG-------AT-----T------------------------GTTTTAATATTTTCG-------T--TGTTT-------------------------A----CCCGCCTAA-------TTTGTGTT-GTTTACG--------------------------------------TTTTTGTGT----------------TCTATCTTATCTCC---CCTTATGCTTT---------------------CG--ATT-CGGTTCGAA------T-CCCCCGCTTTTGTGGCTAACC--C---------AAC----------TGCTTG-C--------------------------GCAC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CTGACC-CAGAGGTG---AGC---C---------ATAACGCATAC---------GCCCCGAATGCCCCGAGTGCCCCG
droYak3 X:20248941-20249236 - AT----------------------T--AATCAATCG---------------------------------------------CG-TA-GGCTAAGTC-CATTGATTGT------AACCTGA-----CCATTG-------ACGACCATTGATTGTTGATTGTTTGTTTGTTTGTTTTAATATTTTCG-------TT-TGTTT-------------------------A----CCCGCCTAA-------TTTGTGTT-CCTTACG--------------------------------------TTTTTGTGT----------------TCTATCTTATCTCCCACTCTTATGCTTT---------------------CC--ATT-CGATTCGAAACCGAAA-CCCCCGCTTTTGTGGCTAACC------------AAC----------TGCTTG-C--------------------------GCACTGCTTGCGCGACTGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CTCATC-CAGAGGTT---AGC---C---------ATAACGCATAC---------GCCCCGAATGCCCCGAGTGCCCCG
droEug1 scf7180000408193:409922-410158 + AT----------------------T--AATCAA-AA---------------------------------------------CG-TA-AGCTAAGTT-CATTGATTGTACTCGCAACTTGA-----CCATTC-------AT-----T------------------------GCTTT-----TTACC-------TT-TGTTT-------------------------A--------CCTAA-------TTTGTGTT-CTTT---------------------------------TG----TGTTTTTGTGT----------------TCT--------TCTC--TCTTCGGTTTT---------------------AC--ATTTCGATTCGAA------A-CCCCCGCTTTTGTGGCTAACC------------AAC----------TGCTTG-C--------------------------GCAC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CTGACC-CAGAGGTG---AGC---C---------ATAACGCATAC---------GCCCCGAATGCCCCGAGTGCCCCG
droBia1 scf7180000302187:455137-455387 + AT----------------------T--AATCAAAAA---------------------------------------------CC-TA-GGCTAAGTT-CATTGTAAGC------G------------CG-----------T-----T------------------------GCTT--------TAC--T----GT-CGTAC-------------------------A--------GCCACTGTCTGATCTGCGTA-GTTTGTGT------------------GTT-GTCACT---T------------------ACGTT-------------------------CTTATGTTTTCTTAT---ATCATTT------CC--ATTCCGATTCGAA------A-TCCCTGCTTTTGTGGCTAAC-------------AAC----------TGCTTTGCCGAC---GCGCGC----T-----CCCGCAC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CCGATCGCAGAGGTG---AGC---C---------ATAACGCATAC---------GCCCCGAATGCCCCGAGTGCCCCG
droTak1 scf7180000415158:370566-370851 + AT----------------------T--AATCAA-CGCAAAAAAAA------------------------------------AC-TA-AGCTAAGTTCCATTGATTGT------AACT---------CATTG-----TAATGA-----------------------------CTT-------------------------T-------------------------ATTATCTTGACTAA-------TTTGTGTT-GTATATGTTTTT--TCGTTTTTTATT---T---------------ATTTTGTGT----------------TTT--------T-CT--TTTTATACTCT---------TCATTTTCGCCCCC--ATTTCGATTCGAA------ATCCCTCGCTTTTGTGGCTAACCAAC-----C---AAC----------TGCTTG-C-------GCGCTCACACTGCTGTGCTGCAC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CTGAT--CAGAGGTG---AGC---C---------ATAACGCATAC---------GCCCCGAATGCCCCGAGTGCCCCG
droEle1 scf7180000490214:841229-841486 + AT----------------------T--GATCAGAAA---------------------------------------------CG-TA-AGCTAAGTT-CATTGATTGT------------------CCATTAACCATT-TT-----T-GCTTA-CCC---------------C-----TGTTTTTG--C---TTT-TGGTT-------------------------A--------CTTAA-------TTTGTT---GTT------T------------------------TTTTTTCTTTGTTTTTGTGTC---------------TCTTTCTTTTCTCCT--TATTTGGTT-----------------------TC--A------TTTGAA------A-TCCCCGCTTTTGTGGCTAAC--------------------------TGCTTTGC---------------A-------------CTGCTTGC---ACTGCTT----------------TGCTGA-----------------------------------------------------------------------------------------CCGAT--CAGAGGTG---AGC---C---------ATAACGCATACGTCCCGAATGCCCCGAATGCCCCCAGTGCCCCG
droRho1 scf7180000780082:147756-148015 + AT----------------------T--TGTCGAAAA---------------------------------------------CG-TA-AGCTAAGTT-CATTGATTGT------------------CCATTAACCAGTTCT-----T------------------------GCTTTCCT-TTTT---------TTCTC------TATTTTTTTTTGTTTTTTGGTTA--------TCTAA-------TTTGTGTT-CTTTGT---------------------------------------TTTTTGTGT----------------TTT-------------------TACTTT---------------------CC--A------TTCGAA------A-TCCCCGCTTTTGTGGCTAACC--CTCGGCTA--AAC----------TGCTTG-C---------------C-------------CTGCTTGC---ACTGCTT----------------CGCTGA-----------------------------------------------------------------------------------------CCGAT--CAGAGGTG---AGC---C---------ATAACGCATACGCCCCGAATGCCCCGAACGCTCCGAGTGCCCCG
droFic1 scf7180000454077:531077-531330 - GT----------------------TGAAATCAAAAA---------------------------------------------CG-TA-AGCTAAGTT-CATTGATTGT--------CCTAA-----CCATTT-------TA-----T------------------------GCTTTCAT-TTTTCG-------TTCTCCTTACTTATTTTTTT-----------------------------------CTGTGTG-C------------------------------------TCTCTTTGTTTTTGTGT----------------TCTATAT-A---------------TTTT-----GAA--TA-CT--CC--CC--A------TTCGAA------A-TCCCCGCTTTTGTGGCTAACC--TGTGGCT---AAC----------TGCTTG-C--------------------------GCGC------------TGCTTACCTGATCCGATCAT---CCGA-------------------------------------------------------------------------------------TCATCCGAT--CAGAGGTG---AGC---C---------ATAACGCATAC---------GCCCCGAATGC---------CCCG
droKik1 scf7180000302395:443250-443524 - GT----------------------T--AATCAA-AACAAAAACAAAGAGAAAAACTAAAAAAAAGATAAGGATAAAGATCAAGCTA-AGCTAAGTT-CATT--TTGC------CCCC------------------------------------------------------CT-------TTTTGTGT----TC-TTT---------------------------------TCGCCTAA-------TTTGTGTT-CT--CCGTTTCTCTTTC---------G------------------TTTC--CATTT--ACCAACTTGTGTTTTAT------------------GT-----------ATCACCT--CC--CC------------AAAACTC--A-ACCCCGCTTTTGTGGCTAACA------------CAT----------TGCTTG-C-------------------------TGCTC------------TGCTT----------------GAACG------------------------------------------------------------------------------------------CCGATC-CAGAGGTG---AGC---C---------ATAACGCATAC---------GCCCCGAATGCCCCCAGTGCCCCG
droAna3 scaffold_13334:1161628-1161886 + AA----------------------G--AAAGAGAAA---------------------------------------------CC-TA-AGCTAAGAA-CTTTTCTTTT---------------------------------------------TTAATT------------GTT-------TTTTG------------TTT------------------AATTT--------TTATTTAA-------TTTTTTT--AT--ACA----------------------TG---TTTATTGTTTTTTTTTGTATCTCC-----ATCGTTT------------------TTTATGTTA----------------------C------------------------CTTCCGCT-TTGTGGCTAACC--AAAAAAAA--AAA------AAACTGCTT------------------------------------------------------------------TGCTGAAACTG-------------------C----------------TTGCC----AAA-----------AAAAAAAAAAACAAAAAAAAATTA-TATAA--CAGAAGTGCATAGC---C---------ATAACTCATAC---------GCCCCGAATGCACCGAGTGCCCCG
droBip1 scf7180000395922:45068-45344 - AGAAAACAGAAAATCCCAAAACGTGGAAAGCAA--A---------------------------------------------AC-TA-AGCTAAGTT-TTTTA-------------------------------------------T------------------------GTTTT-----TTTTG-------TT-TGTTT-------------------------A--------TTT-A-------TTTATTTT-GTTGTTA---------------------------TT---TTTGTATCC-------TCC-------CGTTT------------------TTTATGTTT----------------------C------------------------CTTCCGCT-TTGTGGCTAACC--CCAAAAAAAAATC----------TGCTTG-G-------ATA---------------TGTAC------------TGCTT----------------TGCTGAAACTG-------------------C----------------TTGCCTCTCAAAACGAAATTATTAAAAAAAAAAACAAAAA----------TAA--TAGAAGTGCATAGC---C---------ATAACTCATAC---------GCCCCGAATGCCCCGAGTGCCCCG
dp5 XL_group1a:9150693-9150748 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAGGTG---AGC---GGCAGCACCCACAACTCCTAT---------GCCCCCAATCCGCCAAGTGCCCCG
droWil2 scf2_1100000004515:62752-62788 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---C---------ACAACTCATAC---------GCTCCAAACTCACCAAGCGCTCCG
droVir3 scaffold_12970:7815878-7816113 - dvi_13545 T------------------------------------------------------------------------------------A-TGTTAAGTT-TCCTGTTTAT------GCCA----------------------------T------------------------GTT--------TTTG--C----CC-CGTTT-------------------------C--------CCTA-----------ATGCT-TTTTATGTTTCTGTT------------------------TCTTTGATTTTTTGT--------------TTTTCAT------------------TT--------------------------------TTGTTGT----------CAATCGCTTTTGTGGCTAACA--C-----T---TATTGTTTAC---TGCTGA-C-------GCGCTC--------------TAC------------TGCTG----------------TGCTGCTA--------------CTGCGCTGC----------------CTGCC--------------------------------------------TCGT--GAAAAGTG---AGCAGCGGCAACACCCACAACTCGTAT---------GCACCGAATGCACCTAGCGCTCCG
droMoj3 scaffold_6482:1727369-1727628 + TT----------------------T--TGA-------------------------------------------------------------------------------------------------------------CGT----------------------------CTT-------CTTTGTTTTGGCCT-TGTTT------------------AAT----G--------CTTA-----------TCGCT-TTTTATGTTTCCCTT-------------------C----------TTCTTGTTT----------------TTCTTCATA--------AATTATGTTTT-----------------GCCCTTTTG------T-------------CAAACGCTTTTGTGGCTAACT--C-----T---AACTGCTTAC---CGC--------------------------------TAC------------TGCGC----------------TGCTGCTGTTGCTGCGATGCTGCTGCGATGCTGCGGCAATGCAATCGCTGC------------------------------------------GTCTGAT--CCACAGTG---AGCGGCGGCAACACGCACAACTCGTAC---------GCGCCGAACGGACCCAGCGCCCCG
droGri2 scaffold_15203:11217398-11217575 + TT----------------------T--TGTGTTTCT---------------------------------------------C---------------------TTTT---------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGTTT----------------TTCGTTTT---------------------------------------------A------T-------------TTAACGCTTTTGTGGCTAACA--T-----T---AAT----------TGCTTG-CTGCTGCTG--------CT--------GCTCTGC---------TGCTC--------TGCTGCTACGCTGACACT---------------------------------------GA------------------------------------------CTCTGAT--GTAAAGTG---AACACCGGCAACACCCACAACTCGTTT---------GCGCCAATAGCGCCCAGCGCTCCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AT----------------------T--AATCAGTCG---------------------------------------------CG-TA-GGCTAAGTC-CATTTATTGC------ACCCCGA-----CCATTG-------AC-----T------------------------GTTTTAATATTTTCG-------TT-TGTTT-------------------------ATTCACCCGCCTAA-------TTTGTGTT-GTTTACG--------------------------------------TTTTTGTAT----------------TTTATCTTATCTCCC--CCTTATGCTTT---------------------CC--ATT-CGATTCGAA------A--CCCTGCTTTTGTGGCTAACC------------AAC----------TGCTTG-C--------------------------GCAC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CAGACC-CAGAGGTG---GGC---C---------ATAACGCATAC---------GCCCCGAATGCCCCGAGTGCCCCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................................TT-CGATTCGAA------A--CCCTGCTTTTGTG....................................................................................................................................................................................................................................................................................2512.00200000020000000000
.................................................................................................................................TG-------AC-----T------------------------GTTTTAATATTTTCG-------TT-TG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-C--------------------------GCAC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CAGACC-CAGA...................................................................2811.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................ATGCTTT---------------------CC--ATT-CGATTCGAA------....................................................................................................................................................................................................................................................................................................2111.00100000000010000000
..........................................................................................................................................................................GTTTTAATATTTTCG-------TT-TGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
...........................................................................................................................................................................................................................................CTAA-------TTTGTGTT-GTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000001000000000
droSec2
AT----------------------T--AATCAATCG---------------------------------------------CG-AAGGGCTACGTC-CATTTATTGC------AACCCGC-----CCATTG-------AC-----T------------------------GTTTTAATATTTTCG-------TT-TGTTT-------------------------ATTCACCCGCCTAA-------TTTGTGTG-GTTTACG--------------------------------------TTTTTGTAT----------------TTTATCTTATCTCCC--CCTTATGCTTT---------------------CC--ATT-CGATTCGAA------A--CCCTGCTTTTGTGGCTAACC------------AAC----------TGCTTG-C--------------------------GCAC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CAGACC-CAGAGGTG---GGC---C---------ATAACGCATAC---------GCCCCGAATGCCCCGAGTGCCCCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
AT----------------------T--AATCAATCG---------------------------------------------CG-TA-GGCTAAGTC-CATTGATTGC------AACCCGA-----CCATTG-------ACA----T------------------------TTTTTAATATTTTCG-------TT-TGTTT-------------------------ATCCACCCGCCTAA-------TTTGTGTTTGTTTACGTTTTT---------------------------------TTTTTGTAT----------------TTTATCTTATCTCCC--CCTTATGCTTT---------------------CC--ATT-CGATTCGAA------A-CCCTCGCTTTTGTGGCTAACC------------AAC----------TGCTTG-C--------------------------GCAC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CATACC-CAGAGGTG---AGC---C---------ATAACGCATACGCCCCGAATGCCCCAAGTGCCCCGAGTGCCCCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGA-----------------------------------------------------------------------------------------CATACC-CAGAGGTG---AGC---C---------A...........................................2519.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000301000
.............................TCAATCG---------------------------------------------CG-TA-GGCTAAGTC-CATTGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000011100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................ATT-CGATTCGAA------A-CCCTCGCTTTT.......................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................ATT-CGATTCGAA------A-CCCTCGCTTTTGTG....................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................ATT-CGATTCGAA------A-CCCTCGCTTTTG......................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................T---------------------CC--ATT-CGATTCGAA------A-CCCTCGCTTT........................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGCTAACC------------AAC----------TGCTTG-C--------------------------GCAC------------T.................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACC-CAGAGGTG---AGC---C---------ATAACGCA....................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACC-CAGAGGTG---AGC---C---------ATAACGCATA..................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTAACC------------AAC----------TGCTTG-C--------------------------GCAC------------TGC...............................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................T--AATCAATCG---------------------------------------------CG-TA-GGCTAAGTC-CATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TGCTTT---------------------CC--ATT-CGATTCGAA------A-CCCTCGC...........................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
....................................................................................TA-GGCTAAGTC-CATTGATTGC------AACCCGA-----C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................ATT-CGATTCGAA------A-CCCTCGC...........................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................ATT-CGATTCGAA------A-CCCTCGCTTT........................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................ATT-CGATTCGAA------A-CCCTCGCTT.........................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TT---------------------CC--ATT-CGATTCGAA------A-CCCTCGCT..........................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTT----------------TGCCGA-----------------------------------------------------------------------------------------CATACC-CAGAGGTG---AGC---......................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT----------------TGCCGA-----------------------------------------------------------------------------------------CATACC-CAGAGGTG---............................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TGCTTT---------------------CC--ATT-CGATTCGAA------A-CCC...............................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CC------------AAC----------TGCTTG-C--------------------------GCAC------------TGCTT----------------TGCCGC-----------------------------------------------------------------------------------------..............................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-C--------------------------GCAC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CATACC-.......................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-C--------------------------GCAC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CATACC-CAG....................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTTTTGTGGCTAACC------------AAC----------TG..................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGCTAACC------------AAC----------TGCTTG-C--------------------------GCAC------------..................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TT-CGATTCGAA------A-CCCTCGCTTTTGTGG...................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TATTTTCG-------TT-TGTTT-------------------------ATCCACCCGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------------------------------------------------------------------CATACC-CAGAGGTG---AGC---C---------ATAACGCA....................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTT----------------TGCCGA-----------------------------------------------------------------------------------------CATACC-CAGAGGTG---AGC---......................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TGTAT----------------TTTATCTTATCTCCC--CCTTATGC...................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGTG---AGC---C---------ATAACGC.....................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TGCTTT---------------------CC--ATT-CGATTCGAA------A-CCCTCGCT..........................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................TC-CATTGATTGC------AACCCGA-----CCATTG-------AC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CC--CCTTATGCTTT---------------------CC--ATT-CGATTCGA...........................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTG---AGC---C---------ATAACGCATACGCCCC............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CATACC-CAGAGGT................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................TAAGTC-CATTGATTGC------AACCCGA-----CCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TAACC------------AAC----------TGCTTG-C--------------------------GCAC------------TGCTT----------------T............................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TTT---------------------CC--ATT-CGATTCGAA------A-CCCTCGCTT.........................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-C--------------------------GCAC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------C.............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TTT---------------------CC--ATT-CGATTCGAA------A-CCC...............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................C--ATT-CGATTCGAA------A-CCCTC.............................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACC-CAGAGGTG---AGC---C---------ATAACGCATA..................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................TT-CGATTCGAA------A-CCCTCGCTTTTGTGGC..................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................TCTTATCTCCC--CCTTATGCTTT---------------------CC--.......................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TTT---------------------------------TTTTTGTAT----------------TTTATCTTATCTCCC--CC.........................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................TC-CATTGATTGC------AACCCGA-----CCATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTTTTGTGGCTAACC------------AAC----------TGCT................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TATTTTCG-------TT-TGTTT-------------------------ATCCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................GCTTT---------------------CC--ATT-CGATTCGAA------A-CCCTCGC...........................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TAAGTC-CATTGATTGC------AACCCGA-----CCATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TCAATCG---------------------------------------------CG-TA-GGCTAAGTC-CATTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTAACC------------AAC----------TGCTTG-C--------------------------GCAC------------..................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TATGCTTT---------------------CC--ATT-CGATTCGAA------A-CCC...............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................TTATCTTATCTCCC--CCTTATGCTTT---------------------CC--AT.....................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ATCG---------------------------------------------CG-TA-GGCTAAGTC-CATTGATTGC------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................TTGATTGC------AACCCGA-----CCATTG-------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................ATT-CGATTCGAA------A-CCCTCGCTTTTGT.....................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TCAATCG---------------------------------------------CG-TA-GGCTAAGTC-CATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................T---------------------CC--ATT-CGATTCGAA------A-CCCTCGCT..........................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT----------------TGCCGA-----------------------------------------------------------------------------------------CATACC-CAGAGGTG---AGC---C---------............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTG---AGC---C---------ATAACGCATACGCCCCGAAT........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................T--AATCAATCG---------------------------------------------CG-TA-GGCTAAGTC-CAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................CCCGCCTAA-------TTTGTGTTTGTTTACGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.T----------------------T--AATCAATCG---------------------------------------------CG-TA-GGCTAAGTC-CATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGCTAACC------------AAC----------TGCTTG-C--------------------------GCAC------------T.................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................CACCCGCCTAA-------TTTGTGTTTGTTTACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACC-CAGAGGTG---AGC---C---------ATAACGCA....................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................ACCCGCCTAA-------TTTGTGTTTGTTTACGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGCCCCGAGTGCCCC.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................C------------AAC----------TGCTTG-C--------------------------GCAC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------C.............................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACC-CAGAGGTG---AGC---C---------ATAACG......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................TT---------------------CC--ATT-CGATTCGAA------A-CCCTCGCTTT........................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC-CAGAGGTG---AGC---C---------ATAACGCATACG................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACC-CAGAGGTG---AGC---C---------A...........................................1911.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC-CAGAGGTG---AGC---C---------ATAACGCATACGC...............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGCTAACC------------AAC----------TGCTTG-C--------------------------GCAC------------..................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TA-GGCTAAGTC-CATTGATTGC------AACCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TTGTAT----------------TTTATCTTATCTCCC--CCTTA......................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCCCCAAGTGCCCCGAGTGCCCCG2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................TATTTTCG-------TT-TGTTT-------------------------ATCCACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AT----------------------T--AATCAATCG---------------------------------------------CG-TA-GGCTAAGTC-CATTGATTGT------AACCCGAGCGACCCATTG-------AT-----T------------------------GTTTTAATATTTTCG-------T--TGTTT-------------------------A----CCCGCCTAA-------TTTGTGTT-GTTTACG--------------------------------------TTTTTGTGT----------------TCTATCTTATCTCC---CCTTATGCTTT---------------------CG--ATT-CGGTTCGAA------T-CCCCCGCTTTTGTGGCTAACC--C---------AAC----------TGCTTG-C--------------------------GCAC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CTGACC-CAGAGGTG---AGC---C---------ATAACGCATAC---------GCCCCGAATGCCCCGAGTGCCCCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................TTGTGTT-GTTTACG--------------------------------------TTTTTGTGT----------------TCTA........................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---AGC---C---------ATAACGCATAC---------GCCCCGA.................2311.0011000000
..........................................................................................TAAGTC-CATTGATTGT------AACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
.....................................................................................................GATTGT------AACCCGAGCGACCCATTG-------AT-----................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
..................................................................................G-TA-GGCTAAGTC-CATTGATTGT------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000
droYak3
AT----------------------T--AATCAATCG---------------------------------------------CG-TA-GGCTAAGTC-CATTGATTGT------AACCTGA-----CCATTG-------ACGACCATTGATTGTTGATTGTTTGTTTGTTTGTTTTAATATTTTCG-------TT-TGTTT-------------------------A----CCCGCCTAA-------TTTGTGTT-CCTTACG--------------------------------------TTTTTGTGT----------------TCTATCTTATCTCCCACTCTTATGCTTT---------------------CC--ATT-CGATTCGAAACCGAAA-CCCCCGCTTTTGTGGCTAACC------------AAC----------TGCTTG-C--------------------------GCACTGCTTGCGCGACTGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CTCATC-CAGAGGTT---AGC---C---------ATAACGCATAC---------GCCCCGAATGCCCCGAGTGCCCCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
AT----------------------T--AATCAA-AA---------------------------------------------CG-TA-AGCTAAGTT-CATTGATTGTACTCGCAACTTGA-----CCATTC-------AT-----T------------------------GCTTT-----TTACC-------TT-TGTTT-------------------------A--------CCTAA-------TTTGTGTT-CTTT---------------------------------TG----TGTTTTTGTGT----------------TCT--------TCTC--TCTTCGGTTTT---------------------AC--ATTTCGATTCGAA------A-CCCCCGCTTTTGTGGCTAACC------------AAC----------TGCTTG-C--------------------------GCAC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CTGACC-CAGAGGTG---AGC---C---------ATAACGCATAC---------GCCCCGAATGCCCCGAGTGCCCCGSizeHit CountTotal NormTotal
No Reads
droBia1
AT----------------------T--AATCAAAAA---------------------------------------------CC-TA-GGCTAAGTT-CATTGTAAGC------G------------CG-----------T-----T------------------------GCTT--------TAC--T----GT-CGTAC-------------------------A--------GCCACTGTCTGATCTGCGTA-GTTTGTGT------------------GTT-GTCACT---T------------------ACGTT-------------------------CTTATGTTTTCTTAT---ATCATTT------CC--ATTCCGATTCGAA------A-TCCCTGCTTTTGTGGCTAAC-------------AAC----------TGCTTTGCCGAC---GCGCGC----T-----CCCGCAC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CCGATCGCAGAGGTG---AGC---C---------ATAACGCATAC---------GCCCCGAATGCCCCGAGTGCCCCGSizeHit CountTotal NormTotal
No Reads
droTak1
AT----------------------T--AATCAA-CGCAAAAAAAA------------------------------------AC-TA-AGCTAAGTTCCATTGATTGT------AACT---------CATTG-----TAATGA-----------------------------CTT-------------------------T-------------------------ATTATCTTGACTAA-------TTTGTGTT-GTATATGTTTTT--TCGTTTTTTATT---T---------------ATTTTGTGT----------------TTT--------T-CT--TTTTATACTCT---------TCATTTTCGCCCCC--ATTTCGATTCGAA------ATCCCTCGCTTTTGTGGCTAACCAAC-----C---AAC----------TGCTTG-C-------GCGCTCACACTGCTGTGCTGCAC------------TGCTT----------------TGCCGA-----------------------------------------------------------------------------------------CTGAT--CAGAGGTG---AGC---C---------ATAACGCATAC---------GCCCCGAATGCCCCGAGTGCCCCGSizeHit CountTotal NormTotal
No Reads
droEle1
AT----------------------T--GATCAGAAA---------------------------------------------CG-TA-AGCTAAGTT-CATTGATTGT------------------CCATTAACCATT-TT-----T-GCTTA-CCC---------------C-----TGTTTTTG--C---TTT-TGGTT-------------------------A--------CTTAA-------TTTGTT---GTT------T------------------------TTTTTTCTTTGTTTTTGTGTC---------------TCTTTCTTTTCTCCT--TATTTGGTT-----------------------TC--A------TTTGAA------A-TCCCCGCTTTTGTGGCTAAC--------------------------TGCTTTGC---------------A-------------CTGCTTGC---ACTGCTT----------------TGCTGA-----------------------------------------------------------------------------------------CCGAT--CAGAGGTG---AGC---C---------ATAACGCATACGTCCCGAATGCCCCGAATGCCCCCAGTGCCCCGSizeHit CountTotal NormTotal
No Reads
droRho1
AT----------------------T--TGTCGAAAA---------------------------------------------CG-TA-AGCTAAGTT-CATTGATTGT------------------CCATTAACCAGTTCT-----T------------------------GCTTTCCT-TTTT---------TTCTC------TATTTTTTTTTGTTTTTTGGTTA--------TCTAA-------TTTGTGTT-CTTTGT---------------------------------------TTTTTGTGT----------------TTT-------------------TACTTT---------------------CC--A------TTCGAA------A-TCCCCGCTTTTGTGGCTAACC--CTCGGCTA--AAC----------TGCTTG-C---------------C-------------CTGCTTGC---ACTGCTT----------------CGCTGA-----------------------------------------------------------------------------------------CCGAT--CAGAGGTG---AGC---C---------ATAACGCATACGCCCCGAATGCCCCGAACGCTCCGAGTGCCCCGSizeHit CountTotal NormTotal
No Reads
droFic1
GT----------------------TGAAATCAAAAA---------------------------------------------CG-TA-AGCTAAGTT-CATTGATTGT--------CCTAA-----CCATTT-------TA-----T------------------------GCTTTCAT-TTTTCG-------TTCTCCTTACTTATTTTTTT-----------------------------------CTGTGTG-C------------------------------------TCTCTTTGTTTTTGTGT----------------TCTATAT-A---------------TTTT-----GAA--TA-CT--CC--CC--A------TTCGAA------A-TCCCCGCTTTTGTGGCTAACC--TGTGGCT---AAC----------TGCTTG-C--------------------------GCGC------------TGCTTACCTGATCCGATCAT---CCGA-------------------------------------------------------------------------------------TCATCCGAT--CAGAGGTG---AGC---C---------ATAACGCATAC---------GCCCCGAATGC---------CCCGSizeHit CountTotal NormTotal
No Reads
droKik1
GT----------------------T--AATCAA-AACAAAAACAAAGAGAAAAACTAAAAAAAAGATAAGGATAAAGATCAAGCTA-AGCTAAGTT-CATT--TTGC------CCCC------------------------------------------------------CT-------TTTTGTGT----TC-TTT---------------------------------TCGCCTAA-------TTTGTGTT-CT--CCGTTTCTCTTTC---------G------------------TTTC--CATTT--ACCAACTTGTGTTTTAT------------------GT-----------ATCACCT--CC--CC------------AAAACTC--A-ACCCCGCTTTTGTGGCTAACA------------CAT----------TGCTTG-C-------------------------TGCTC------------TGCTT----------------GAACG------------------------------------------------------------------------------------------CCGATC-CAGAGGTG---AGC---C---------ATAACGCATAC---------GCCCCGAATGCCCCCAGTGCCCCGSizeHit CountTotal NormTotal
No Reads
droAna3
AA----------------------G--AAAGAGAAA---------------------------------------------CC-TA-AGCTAAGAA-CTTTTCTTTT---------------------------------------------TTAATT------------GTT-------TTTTG------------TTT------------------AATTT--------TTATTTAA-------TTTTTTT--AT--ACA----------------------TG---TTTATTGTTTTTTTTTGTATCTCC-----ATCGTTT------------------TTTATGTTA----------------------C------------------------CTTCCGCT-TTGTGGCTAACC--AAAAAAAA--AAA------AAACTGCTT------------------------------------------------------------------TGCTGAAACTG-------------------C----------------TTGCC----AAA-----------AAAAAAAAAAACAAAAAAAAATTA-TATAA--CAGAAGTGCATAGC---C---------ATAACTCATAC---------GCCCCGAATGCACCGAGTGCCCCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGC---C---------ATAACTCATAC---------GCCCC...................2111.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-----------AAAAAAAAAAACAAAAAA.....................................................................................21200.102020000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAACAAAAAAAA...................................................................................19200.051001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAACAAAAAAAAATT................................................................................19200.051010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------AAAAAAAAAAACAAAAAAAAA..................................................................................22200.051001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-----------AAAAAAAAAAACAAA........................................................................................18200.051010000
droBip1
AGAAAACAGAAAATCCCAAAACGTGGAAAGCAA--A---------------------------------------------AC-TA-AGCTAAGTT-TTTTA-------------------------------------------T------------------------GTTTT-----TTTTG-------TT-TGTTT-------------------------A--------TTT-A-------TTTATTTT-GTTGTTA---------------------------TT---TTTGTATCC-------TCC-------CGTTT------------------TTTATGTTT----------------------C------------------------CTTCCGCT-TTGTGGCTAACC--CCAAAAAAAAATC----------TGCTTG-G-------ATA---------------TGTAC------------TGCTT----------------TGCTGAAACTG-------------------C----------------TTGCCTCTCAAAACGAAATTATTAAAAAAAAAAACAAAAA----------TAA--TAGAAGTGCATAGC---C---------ATAACTCATAC---------GCCCCGAATGCCCCGAGTGCCCCGSizeHit CountTotal NormTotal
No Reads
dp5
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAGGTG---AGC---GGCAGCACCCACAACTCCTAT---------GCCCCCAATCCGCCAAGTGCCCCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTG---AGC---GGCAGCACCCACA.........................................1911.0010000010000
droWil2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---C---------ACAACTCATAC---------GCTCCAAACTCACCAAGCGCTCCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATAC---------GCTCCAAACTCACCAAGCGC....2711.00100001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATAC---------GCTCCAAACTCAC...........2011.00100010
droVir3
T------------------------------------------------------------------------------------A-TGTTAAGTT-TCCTGTTTAT------GCCA----------------------------T------------------------GTT--------TTTG--C----CC-CGTTT-------------------------C--------CCTA-----------ATGCT-TTTTATGTTTCTGTT------------------------TCTTTGATTTTTTGT--------------TTTTCAT------------------TT--------------------------------TTGTTGT----------CAATCGCTTTTGTGGCTAACA--C-----T---TATTGTTTAC---TGCTGA-C-------GCGCTC--------------TAC------------TGCTG----------------TGCTGCTA--------------CTGCGCTGC----------------CTGCC--------------------------------------------TCGT--GAAAAGTG---AGCAGCGGCAACACCCACAACTCGTAT---------GCACCGAATGCACCTAGCGCTCCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTCGTAT---------GCACCGAATGCACCT.........2511.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGTAT---------GCACCGAATGCACCT.........2311.001000000000000000010000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---AGCAGCGGCAACACCCACAACTC.....................................2411.001000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGTAT---------GCACCGAATGCACC..........2211.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAACACCCACAACTCGTAT---------GCACCG..................2711.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTG---AGCAGCGGCAACACCCACAAC.......................................2511.001000000000000000010000000000000000000000000000000000000000000000
droMoj3
TT----------------------T--TGA-------------------------------------------------------------------------------------------------------------CGT----------------------------CTT-------CTTTGTTTTGGCCT-TGTTT------------------AAT----G--------CTTA-----------TCGCT-TTTTATGTTTCCCTT-------------------C----------TTCTTGTTT----------------TTCTTCATA--------AATTATGTTTT-----------------GCCCTTTTG------T-------------CAAACGCTTTTGTGGCTAACT--C-----T---AACTGCTTAC---CGC--------------------------------TAC------------TGCGC----------------TGCTGCTGTTGCTGCGATGCTGCTGCGATGCTGCGGCAATGCAATCGCTGC------------------------------------------GTCTGAT--CCACAGTG---AGCGGCGGCAACACGCACAACTCGTAC---------GCGCCGAACGGACCCAGCGCCCCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAACTCGTAC---------GCGCC...................1911.001001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAC---------GCGCCGAACGGACCCAGC......2211.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---AGCGGCGGCAACACGCACAACT......................................2311.001100000
droGri2
TT----------------------T--TGTGTTTCT---------------------------------------------C---------------------TTTT---------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGTTT----------------TTCGTTTT---------------------------------------------A------T-------------TTAACGCTTTTGTGGCTAACA--T-----T---AAT----------TGCTTG-CTGCTGCTG--------CT--------GCTCTGC---------TGCTC--------TGCTGCTACGCTGACACT---------------------------------------GA------------------------------------------CTCTGAT--GTAAAGTG---AACACCGGCAACACCCACAACTCGTTT---------GCGCCAATAGCGCCCAGCGCTCCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTG---AACACCGGCAACACCCACAAC.......................................2411.00110
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCGTTT---------GCGCCAATAGCGCC..........2311.00110
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTG---AACACCGGCAACACCCACAACT......................................2611.00110

Generated: 05/19/2015 at 05:25 PM