ID:

dsi_29036

 Coordinate:

x:20824883-20825032 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ACGACATTTAATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGACCCCGAAGCGAATCAAAACGAAAAAATAAAGTCCTCTAAAAGCAAACAACGCTAAGTGCTTGTGTTAGGTCTTTGCTTATTTTAAAGTATATGCCAAAATATTATCTCCAAAAAAATTAGTGAGAAATGTGCTTTTTTTTCTCGTACAAATGATGTTCTTTCGATAATTGTGTGCACAAGAGTGAGACGCAAG
**************************************************(((((((((......((........)).........................((((.((.....))))))....))))))))).......(((((((((.......(((((.............)))))....)))))))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
.........................................................................................................................................................................................................................TCGATAATTGTGTGCACAAGAGTGAGA...... 27 0 1 2.00 2 0 0 2 0 0 0
......................................TTCAAATCAGAGGTAAAGACCC.............................................................................................................................................................................................. 22 0 1 2.00 2 2 0 0 0 0 0
....................................AGTTCAAATCAGAGGTAAAGACC............................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
..................................ATAGTTCAAATCAGAGGGAAAGA................................................................................................................................................................................................. 23 1 1 1.00 1 0 0 1 0 0 0
....................................................................................................................................................................TCCAAAAAATTAGTGAGAAATGTGCT............................................................ 26 2 1 1.00 1 0 1 0 0 0 0
...........TTCATTCTGTGCTAGATTTCCCGAT...................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................................................................................................TGTGCTTTTTTTTCTCGTACAAATGA........................................ 26 0 1 1.00 1 0 1 0 0 0 0
..................................ATAGTTCAAATCAGAGGTAAAGACCC.............................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
..................................ATAGCTCAAATCAGAGG....................................................................................................................................................................................................... 17 1 1 1.00 1 0 1 0 0 0 0
.....................................GTTCAAATCAGAGGTAAAGACCC.............................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................................AAAGGATGTTATTTCGAGAAT......................... 21 3 4 0.50 2 0 0 0 2 0 0
...........................................ATCAGACGGAAAGACCCC............................................................................................................................................................................................. 18 2 3 0.33 1 0 0 0 0 1 0
..............................................AGACGTAAAGACCCC............................................................................................................................................................................................. 15 1 5 0.20 1 0 0 0 0 1 0
.................................................................................................................TGCTTGTGTTCGGACTTTGATT................................................................................................................... 22 3 7 0.14 1 0 0 0 0 0 1
....................................................AAAGAGCCCGAAGCG....................................................................................................................................................................................... 15 1 13 0.08 1 0 0 0 1 0 0
..............................................................................................................................................................................................TTTTTTTCTCGTGCA............................................. 15 1 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

TGCTGTAAATTAAGTAAGACACGATCTAAAGGGCTATCAAGTTTAGTCTCCATTTCTGGGGCTTCGCTTAGTTTTGCTTTTTTATTTCAGGAGATTTTCGTTTGTTGCGATTCACGAACACAATCCAGAAACGAATAAAATTTCATATACGGTTTTATAATAGAGGTTTTTTTAATCACTCTTTACACGAAAAAAAAGAGCATGTTTACTACAAGAAAGCTATTAACACACGTGTTCTCACTCTGCGTTC
**************************************************(((((((((......((........)).........................((((.((.....))))))....))))))))).......(((((((((.......(((((.............)))))....)))))))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
.................................................................................................................................................................AGAGGTTTTTTTAAT.......................................................................... 15 0 5 1.40 7 4 2 0 1
.............................................................................................................................................................................................AAAAAAAAGACCATGCTGACTA....................................... 22 3 1 1.00 1 1 0 0 0
.........................................................................TTGCTTTTTTAGTTCAGAAGGT........................................................................................................................................................... 22 3 3 0.33 1 1 0 0 0
...................................................................................................................................................................................................................................AGACATGTTCTAACTCTGCGT.. 21 3 4 0.25 1 0 0 1 0
.........................................................................................GGACATTTTCGTTTG.................................................................................................................................................. 15 1 11 0.09 1 1 0 0 0
..............................................................................................................................................................................................ACAAGAAGAGCATGTTT........................................... 17 2 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:20824833-20825082 - dsi_29036 ACGACATTTA-ATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGA-CC---------------------------------------------------CCGAAGCGAATCAAAACGAAAAAA--T--------------------------------AA-AGTCC---------------------------TCT-------------------------------------------------------------------------------AAAAGCAA------ACAAC-GCT-AAGTGC--TT-GT-GT-------------T-------AG--------------GTCTTTGCTT-----------------------------------------------------ATTTT------------------AAAGTATATGCCAAAATATTATCTCC------A----A------AAAAATT----------------AGTGA-----------------------------------G----------------------------------------------------------------AAAT-----GTGCT--------T-T-TTTTTCTCG----------------TACAA-ATGATGTTCT---T--TC--GATAATTGTGTGC-ACAAGAGTGAGACGCAAG
droSec2 scaffold_39:322821-323070 - ACGACATTTA-ATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGA-CC---------------------------------------------------CCGAAGCGAATCAAAACGAAAAAA--T--------------------------------AA-AGTCC---------------------------TCT-------------------------------------------------------------------------------AAAAGCAA------ACAAC-GCT-AAGTGC--TT-GT-GT-------------T-------AG--------------GTCTTTGCTT-----------------------------------------------------ATTTT------------------AAAGTATGTGCCAAAATATTATCTCC------A----A------AAAAATT----------------AGTGA-----------------------------------G----------------------------------------------------------------AAAT-----GTTCT--------T-T-TTTTTCTCG----------------TACAA-ATGATGTTCT---T--TC--GATAATTGTGTGC-ACAAGAGTGAGACGCAAG
dm3 chrX:22406260-22406497 - ACGACATTTA-ATTCATTCTGTTCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGA-CC---------------------------------------------------CCGAACCGAATCAAAACGAAAAA--CT--------------------------------AA-AGTCC---------------------------TCT-------------------------------------------------------------------------------GAAAACAA------ACAAC-GCT-AGGTAC--TT-GT-GT-------------T-------AG--------------CTCTTTGCTT-----------------------------------------------------ATTTT------------------AAAGTATATGCCAAAATATTATCTTC------G----A------AAACAAG----------------TGAGA-----------------------------------G----------------------------------------------------------------AAAT-----GTGTT--------T-T-TTTTTTTCG----------------TACAA------------------T--GATAATTGTATGC-ACAAGAGTGAGACGTAAG
droEre2 scaffold_4690:18659981-18660177 - ACGACATTTA-ATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGC-CC---------------------------------------------------CCGAAGCGAATCGAAACTAAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTT------------------AAAGTATATGGTAAAATTGTATCTCT------A----A------AAACAAG----------------AGGGA-----------------------------------G----------------------------------------------------------------AAATG----TGTG---------TTT--TTTTTTCG----------------TACAA-ATGAAGTTCT---T--TC--GATAATTGTGTGC-ACAAGTGTGAGACGTAAG
droYak3 X:21728289-21728543 - ACGACATTTA-ATTCATTCTGTTCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGC-CC---------------------------------------------------CCGAAGCGAATCGAAACGAAAA-ACCA--------------------------------CA-AGTCC---------------------------TCT-------------------------------------------------------------------------------AAAACCAA------ACTAC-GCT-AGTCGC--CT-GT-GC-------------T-------CCCC------------CTTTTTGCTT-----------------------------------------------------ATTTT------------------AAAGTATATGCCAAAATATTATCTCC------A----A------AAAGAAG----------------AGCGA-----------------------------------T----------------------------------------------------------------AAATGTGATT--C---------TTT--TTTTTTCG----------------TACAA-ATGAAGTTTT---T--TC--GATAATTGTGTGC-AAAAGAGTGAGACGTAAG
droEug1 scf7180000408987:110844-111110 + ACGACGTTTT-ATTCATTCTGTGCTAGATTTCCCTATAGTTCAAATCAGAGGTAAAGC-C----------------------------------------------------CTGAAGCAAATAGAAACGAAAGTACCA--------------------------------GA-AATCC---------------------------ATT-------------------------------------------------------------------------------AAAATAAAATTG---TAATACCC-AAGT--TGTTAA-------------------------------------------CTTTGTCT-----------------------AGTTGGAA----------------------ATTT------------------------------CAATATATTGCGCCC----TTA----C------ACAAATA----------------GGAAA-------------------------------------AAGGGTCAA--------------------------------------GGC-------CGAGTGAAAT-----TGTGT--------T-T-T---TTTTG----------------TACAA-ATTAAGTTCTGGTCTGTTAAAATAAACGTGTGC-ACAGGAGTAAGGTTTAAG
droBia1 scf7180000299500:42509-42781 - ACGACGTTCT-ACTCATTCTGTGCTAGATTTCCCGATAGTTCAAACCAGAGGTAAAGC-CA---------------------------------------------------CCGA-GC-AACCGAAAGAAGAATACCT--------------------------------AA-AATCC---------------------------GCA-------------------------------------------------------------------------------AAACCCAGGCTG---CCAC-GCG-CAGTGTTGTTAGT-CA-------------C-------TG--------------CCTTTTATTC-----------------------------------------------------ATTTT------------------AATATACTTCCGGAAGCGTTGGGTCC------A----G------AAGGAAA----------------GGATA-------------------------------------AAGTGGAAA--------------------------------------GCC-------CGAGTGAAAT-----AGTGT--------T-T-T-TTTTTCG----------------ACCGA-ACACAGTTTT---ATATTGGGACAA---AGTGT-ACAAGAGTGAGACGTGAG
droTak1 scf7180000415769:23495-23767 - ACGACATTTT-ATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGC-CC---------------------------------------------------CGGAAGGGAATCGAAACAAAAATACCT--------------------------------GA-AATTC---------------------------GCT-------------------------------------------------------------------------------ATAACTAA-----CACAAC-GCTGCAGT--TTTTAAT-GT-------------T-------GG--------------CTCTTTGCTA-----------------------------------------------------ATTTT------------------AATATATTTCGAAAAGTATTGGGTCC------A----A------AAAGAAG----------------GGG-T-----------------------------------GA-AATACTAA--------------------------------------TGC-------CCAGTGAAAT-----TGTGT--------T-T-T--TTTTCG----------------TACGA-ATCAAGTTTT----TATTGAGATAAAAGTGTGT-ACAAGTGTGAGACGTAAG
droEle1 scf7180000491087:499713-499974 + ATGACATTTT-ATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGC-CC---------------------------------------------------CCGAAGCGAATCGGAACGAAAATACCA-------------------------------AGA-AATTC---------------------------GCT-------------------------------------------------------------------------------AAAACCAAACCC---CAAAA---------------GC-GT-------------T-------TG--------------CTCTTTGCTA-----------------------------------------------------ATTTA---C--------------AATTTTTTTGCGAGAATATTGGGTCT------A----A------AAAGAAA----------------GGAGA-------------------------------------------AAA--------------------------------------AAT-------CGAGTGAAAC-----GGTGT--------T-T-TTTGCCTCG----------------TACGA-ATCGGGTTCT---TCGTTGAGATAAAAGTGTGC-TTAAGAGTGAGACGTAAG
droRho1 scf7180000771379:5623-5901 + ACGACATTTT-ATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGC-CC---------------------------------------------------CCGAAGCAAATCGAAACGAAAATACCA--------------------------------AA-AATCC---------------------------GCTA------------------------------------------------------------------------------AAAACCAAATCC---CAAGACCT-AAGT--TGTTAGC-GT-------------T-------TG--------------CTATTTTCTA-----------------------------------------------------AATTA------------------AATATATTTGCGAGAGTATTGGGTCC------A----A------GAAAAAA----------------GGAAA-----------------------------------GAAAAAGCCAA--------------------------------------TGC-------CGAGTGAAAC-----GGTGT--------T-T-T--TTTTCG----------------TACAA-ATCGAGCTCT---CAGTTGAGATAAAAGTGTGC-TTAAGAGTGAGACGTAAG
droFic1 scf7180000453495:140140-140413 - TTGACATTTT-ATTCATTCTGCGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGC-CC--------------------------------------------------CCCGAAGCAAACCGAAACGAGAAAACCA--------------------------------GA-AATCC---------------------------TCT-------------------------------------------------------------------------------TAAATTAAACCA---AAAAGGCC-AAGT--TGTTAAAATT-------------T-------TA--------------CTATTTGCTC-----------------------------------------------------ATTTT------------------TATATATTTCCGGAAATATTGGGTCC------A----A------AAAGCAG----------------GGAGG------------------------------------AGAACA-CAG--------------------------------------AGC-------CTAGTGAATC-----GGTAT--------T-T-TT------A----------------TACGA-ATCGAGTTCT---CCGTCGAGATACAAGTGTGC-ACAAAAGCGAGACGTAAG
droKik1 scf7180000302398:66148-66505 + ATGACATTTT-ATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGC-CC----------------------------------------------------CGAAACAA------ACGAAAGAA--TAAGAGT--C-TCCGC------ATC----------------------------------------------------------GAAAGCGAAAACGAGAAAAGAAAAGCCAGGCGCATCAGCGATTTGTAACGAGTATGGAAAATCCGCTAA--GCAA------ATAA---------------------TTACCGTTAAACGGTGATTCTTCTCCCTCTCTCTCTAACTCTCTGTCTATATCCAAGTTTTATCCTGATTTCCTGTGGA--ATTGC---A---------------T------------------AAAGTATACATCA------TATTCTT------G----A------AGA--------------------------------------------------------------------AAG--------------------------------------TGC-------CGAGTGAAAC-----GGGTT--------T-T-TTT--TTCTTGCTTT-----TC--TT-CG----------------AGTTGAGATAAAAG--TGCCAAGAGAGTGAGACGTAAG
droAna3 scaffold_12929:1021187-1021553 + ATGACATTTT-ATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAACC-GA-----------------------------CAAAT---------------------------------------AA--TACGAGA--ATTACGAAGGCGTAGCGAACGCT-AA-AATCT-ACTTCAAAGAAAA-------------AC-CGAAA----A--------------------------------------------AGACCGTT----------------------------------------AGAAT--CTATAAA-C----------------------------------------------------------TTTATCGTTATTT------------------ATTA--------ATTATAAATAATTTTCTTCATTTCT-----------TCGTTTTAATCC----TTCCCAAAAAAAGTAAAAGAAA----------------GGAGAAAAAGAAAATAAGAATAGAAAAGAAAAAGTGGAAAATAAACGGAAA--------------------------------------AAC-------CGAGTGTAAC-----GGTTTCCATTTCCTTT-T-TTTTTCT---------GGCCATGT-CGAGTTGAGGTTCT---CTTTCGAGATAAA--AGTGC-GCAAGAGTGAGACGTAAG
droBip1 scf7180000396592:18963-19292 + GTGACATTTT-ATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAACC-GA-----------------------------CATAT---------------------------------------AA--TACGAGA--ATTACGA------AGCGAACGCC-AAAAATCTTACCCCAAAAAAAAAAAGAAAGAAACACC-CGAAA----A--------------------------------------------TAACAATT----------------------------------------AGAAT--TATTAAA-CT-------------T----------------------------------------------ACCGTTATAT------------------ATTA--------ATTAC------------------AATTTTTTTTCT-ACGTTTTATCCCCTCCTCCCCACTA------AAAGAAA----------------AGTGG--------------------------------CAACTAAACG-AAA--------------------------------------AAC-------CGAGTGAAAC-----GGTTACCT-----T-T-T-TTTTATT-----TGCTGGCCATGT-CGAGTTGAGGTTCT---CTTTCGAGATAAA--AGTGC-GCAAGAGTGAGACGTAAG
dp5 XL_group1a:8185337-8185671 + ATGACATTTT-ACTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAACACA-------------------------------AA-----------------------------------------------TCGAGGAGATTAC---------------GGC-AGTAA---AACCCCCAAGTAAATAAGAAAGAGCCAGC-AGACA----ACCAAAAAC-------------CAAAAACCAAAC------------------------------------CAAACCAAACCAAAACCAC-GCT-CAACGC-----------------------TCAATA-------------------CCTCCGCCT-----------------------AAAA---AAT-----ATCCAGAACTAAAGT--------AAATTCAAGAAATTTCATTGATTTT-----------CG--------------G------CAAGAAGTGTGTGTGCTGTGCCACGAGGAAACGAAC----------------------------------------------------------------------------GTA-------CGAACGCAAT-----TG--T--------T-T------TTCCTGAATT----------------------TCCC---CCCTTCACCCAATAAAGTGC-GCAAGAGTGAGACGTAAG
droPer2 scaffold_15:544549-544878 + ATGACATTTT-ACTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAACACA-------------------------------AA-----------------------------------------------TCGAGGAGATTAC---------------GGC-AGTAA---AACCCCCAAGTAAATAAAAAAGAGCCAGC-AGACA----ACCAAAACC-------------CAAAAAT-----------------------------------------CAAACCAAACCAAAACCAC-GCT-CAACGC-----------------------TCAATA-------------------CCTCCGCCT-----------------------AAAA---AAT-----ATCCAGAACTAAAGT--------AAATTCAAGAAATTTCATTGATTTT-----------CG--------------G------CAAGAAGTGTATGTGCTGTGCCACGAGGAAACGAAC----------------------------------------------------------------------------GTA-------CGAAAGCAAT-----TG--T--------T-T------TTCCTGAATT----------------------TCCC---CCCTTCACCCAATAAAGTGC-GCAAGAGTGAGACGTAAG
droWil2 scf2_1100000004515:1930829-1930908 + ATGACATTTT-CTTCATTCTGTTCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAAC-CC----------------------------------------------------CATAACGCAACGGAACAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12970:4620472-4620701 - TTGGCATTTCCATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAACAGAGC---------------------------------------------------AAAAAGCCATTCAAATTTAATATAAAT--------------------------------AA-AATCC--------------------------AGC-AAATACCGAACCAATACC-------------CAAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------A------------------------------------AAAACA-CAATTAATATCTAAA--TAATAATTGATTTGCTCAATTTGGAGC-------TCA--GAAATA----GTTGT--------T-TTTTT--TA-----ATT---------------------GTTCT---T--T------AA--AAGTGC-GCAAGAGTGAGACGTAAG
droMoj3 scaffold_6473:7626712-7626939 - ATGGCACGCTCATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAATAAAGAAAAAAGAGAAGACAGAAAAACGCCAACCACAAAC-----------------------------------AATCTAAAT--------------------------------AA-AATCC--------------------------AGCT-------------------------------------------------------------------------------AA-----------AAAA------------------------------------------------------------------------------------------------------------ACCCTGAATTAAAAA--------CAATTGCAATTATTTCATAAATTTG-----------CGCT------A-----G------CAAAA------------------------------------------------------------------------------------------------------------------------ATTAAACA----ATTAT--------T-T-TTT--TA-----ATT---------------------GTTCT---T--T------AA--AAGTGC-GCAAGAGTGAGACGTAAG
droGri2 scaffold_15203:10670607-10670867 + GTGGCATTTTCAGTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAACAAAGAAGAA----AAGAAAG--------CATTCAATAATAATATAAATAAAATCCCACAAAAAGAACCGAACC--------------------------------------------------------------------------------------------AATGCCAAAAACAACAACAAAAAAAACATT-------------------------------------AAAAT------------------------------------------------T----------------------------------------------AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATGTAAAAAAAATAAACGTTTTCCTTAACTTTGAGAGCAGCAACATTCGCAAT-----TGCTT--------T-T-T--TTTTTG--AATT---------------------GTTCT---T--T------GA--AAGTGC-AAAAGAGTGAGACGTAAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACGACATTTA-ATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGA-CC---------------------------------------------------CCGAAGCGAATCAAAACGAAAAAA--T--------------------------------AA-AGTCC---------------------------TCT-------------------------------------------------------------------------------AAAAGCAA------ACAAC-GCT-AAGTGC--TT-GT-GT-------------T-------AG--------------GTCTTTGCTT-----------------------------------------------------ATTTT------------------AAAGTATATGCCAAAATATTATCTCC------A----A------AAAAATT----------------AGTGA-----------------------------------G----------------------------------------------------------------AAAT-----GTGCT--------T-T-TTTTTCTCG----------------TACAA-ATGATGTTCT---T--TC--GATAATTGTGTGC-ACAAGAGTGAGACGCAAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC--GATAATTGTGTGC-ACAAGAGTGAGA......2712.00200000002000000000
.......................................TTCAAATCAGAGGTAAAGA-CC---------------------------------------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00220000000000000000
.....................................AGTTCAAATCAGAGGTAAAGA-CC---------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
............TTCATTCTGTGCTAGATTTCCCGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----GTGCT--------T-T-TTTTTCTCG----------------TACAA-ATGA................................................2611.00100000010000000000
...................................ATAGTTCAAATCAGAGGTAAAGA-CC---------------------------------------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000000000
......................................GTTCAAATCAGAGGTAAAGA-CC---------------------------------------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
droSec2
ACGACATTTA-ATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGA-CC---------------------------------------------------CCGAAGCGAATCAAAACGAAAAAA--T--------------------------------AA-AGTCC---------------------------TCT-------------------------------------------------------------------------------AAAAGCAA------ACAAC-GCT-AAGTGC--TT-GT-GT-------------T-------AG--------------GTCTTTGCTT-----------------------------------------------------ATTTT------------------AAAGTATGTGCCAAAATATTATCTCC------A----A------AAAAATT----------------AGTGA-----------------------------------G----------------------------------------------------------------AAAT-----GTTCT--------T-T-TTTTTCTCG----------------TACAA-ATGATGTTCT---T--TC--GATAATTGTGTGC-ACAAGAGTGAGACGCAAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................AGTTCAAATCAGAGGTAAAGA-CC---------------------------------------------------CCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
..............................TCCCGATAGTTCAAATCAGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
.................................CGATAGTTCAAATCAGAGGTAAAGA-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
dm3
ACGACATTTA-ATTCATTCTGTTCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGA-CC---------------------------------------------------CCGAACCGAATCAAAACGAAAAA--CT--------------------------------AA-AGTCC---------------------------TCT-------------------------------------------------------------------------------GAAAACAA------ACAAC-GCT-AGGTAC--TT-GT-GT-------------T-------AG--------------CTCTTTGCTT-----------------------------------------------------ATTTT------------------AAAGTATATGCCAAAATATTATCTTC------G----A------AAACAAG----------------TGAGA-----------------------------------G----------------------------------------------------------------AAAT-----GTGTT--------T-T-TTTTTTTCG----------------TACAA------------------T--GATAATTGTATGC-ACAAGAGTGAGACGTAAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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....................................................TAAAGA-CC---------------------------------------------------CCGAACCGAATCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-T-TTTTTTTCG----------------TACAA------------------T--GATA............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................AAC-GCT-AGGTAC--TT-GT-GT-------------T-------AG--------------...............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................A-CC---------------------------------------------------CCGAACCGAATCAAAACGAAAAA--C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ATTCATTCTGTTCTAGATTTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........A-ATTCATTCTGTTCTAGATTTCCCGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAG----------------TGAGA-----------------------------------G----------------------------------------------------------------AAAT-----GTGTT--------T-T-...................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TCAAAACGAAAAA--CT--------------------------------AA-AGTCC---------------------------TCT-------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCCAAAATATTATCTTC------G----A------AAACA........................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CATTTA-ATTCATTCTGTTCTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TAGATTTCCCGATAGTTCAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................A------ACAAC-GCT-AGGTAC--TT-GT-GT-------------.......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................AA-AGTCC---------------------------TCT-------------------------------------------------------------------------------GAAAACAA------ACAAC-GC......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTCG----------------TACAA------------------T--GATAATTGTA......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GATTTCCCGATAGTTCAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................CC---------------------------TCT-------------------------------------------------------------------------------GAAAACAA------ACAAC-GCT-AGG.................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCCAAAATATTATCTTC------G----A------AAA..........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TTTCCCGATAGTTCAAATCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....................................AGTTCAAATCAGAGGTAAAGA-C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................AATCAAAACGAAAAA--CT--------------------------------AA-AG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
......TTTA-ATTCATTCTGTTCTAGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGATTTCCCGATAGTTCAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTCATTCTGTTCTAGATTTCCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................AACAA------ACAAC-GCT-AGGTAC--TT-GT-GT-------------.......................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGA-----------------------------------G----------------------------------------------------------------AAAT-----GTGTT--------T-T-TTTTTTTCT----------------..........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTCG----------------TACAA------------------T--GATAATT.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....................................................AAAGA-CC---------------------------------------------------CCGAACCGAATCAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG----------------TGAGA-----------------------------------G----------------------------------------------------------------AAAT-----GTGTT--------T-T-TTT................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................CC---------------------------TCT-------------------------------------------------------------------------------GAAAACAA------ACAAC-GCT-....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................GCT-AGGTAC--TT-GT-GT-------------T-------AG--------------CTC............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................GTAAAGA-CC---------------------------------------------------CCGAACCGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGA-----------------------------------G----------------------------------------------------------------AAAT-----GTGTT--------T-T-TTT................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................AAAA--CT--------------------------------AA-AGTCC---------------------------TCT-------------------------------------------------------------------------------GAAAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TAGTTCAAATCAGAGGTAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................AGTCC---------------------------TCT-------------------------------------------------------------------------------GAAAACAA------ACAAC-G.......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......TTA-ATTCATTCTGTTCTAGATTTCCCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC------G----A------AAACAAG----------------TGAGA-----------------------------------G----------------------------------------------------------------AA...........................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............TCATTCTGTTCTAGATTTCCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATGC-ACAAGAGTGAGACG....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................AAAGA-CC---------------------------------------------------CCGAACCGAATCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................AAAAA--CT--------------------------------AA-AGTCC---------------------------TCT-------------------------------------------------------------------------------GA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................AAACAA------ACAAC-GCT-AGGTAC--TT-GT-GT-------------.......................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGATTTCCCGATAGTTCAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGA-----------------------------------G----------------------------------------------------------------AAAT-----GTGTT--------T-T-TTTT...............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGC-ACAAGAGTGAGACGTA..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TTGCTT-----------------------------------------------------ATTTT------------------AAAGTATATG...............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................GAATCAAAACGAAAAA--CT--------------------------------AA-AGTCC---------------------------TC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................T-AGGTAC--TT-GT-GT-------------T-------AG--------------CTCC...........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TTTCCCGATAGTTCAAATCAGAGGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................AA--CT--------------------------------AA-AGTCC---------------------------TCT-------------------------------------------------------------------------------GAAAACAA------ACAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTC------G----A------AAACAAG----------------TGG...................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TCAAATCAGAGGTAAAGA-CC---------------------------------------------------CCGAACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCG----------------TACAA------------------T--GATAATTGT.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAAG----------------TGAGA-----------------------------------G----------------------------------------------------------------AAAT-----GTGTT--------T-T-...................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TAGTTCAAATCAGAGGTAAAGC-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AA------ACAAC-GCT-AGGTAC--TT-GT-G.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................TCAGAGGTAAAGA-CC---------------------------------------------------CCGAACCGAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC------G----A------AAACAAG----------------TGAGA-----------------------------------G----------------------------------------------------------------A............................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTTA-ATTCATTCTGTTCTAGATTTCCCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGC-ACAAGAGTGAGACGTA..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TCT-------------------------------------------------------------------------------GAAAACAA------ACAAC-GCT-AGGTAC--T...........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................AAAAA--CT--------------------------------AA-AGTCC---------------------------TCT-------------------------------------------------------------------------------G...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CAGAGGTAAAGA-CC---------------------------------------------------CCGAACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................AGGTAAAGA-CC---------------------------------------------------CCGAACCGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT-----GTGTT--------T-T-TTTTTTTCG----------------TACAA------------------T--GA..............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ATTTA-ATTCATTCTGTTCTAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................AGTTCAAATCAGAGGTAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGA-----------------------------------G----------------------------------------------------------------AAAT-----GTGTT--------T-T-T..................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTATCTTC------G----A------AAACAAG----------------TGAG..................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................CC---------------------------------------------------CCGAACCGAATCAAAACGAAAAA--C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TCT-------------------------------------------------------------------------------GAAAACAA------ACAAC-GCT-AG..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
droEre2
ACGACATTTA-ATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGC-CC---------------------------------------------------CCGAAGCGAATCGAAACTAAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTT------------------AAAGTATATGGTAAAATTGTATCTCT------A----A------AAACAAG----------------AGGGA-----------------------------------G----------------------------------------------------------------AAATG----TGTG---------TTT--TTTTTTCG----------------TACAA-ATGAAGTTCT---T--TC--GATAATTGTGTGC-ACAAGTGTGAGACGTAAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................GATTTCCCGATAGTTCAAATCAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
...........ATTCATTCTGTGCTAGATTTCCCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
droYak3
ACGACATTTA-ATTCATTCTGTTCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGC-CC---------------------------------------------------CCGAAGCGAATCGAAACGAAAA-ACCA--------------------------------CA-AGTCC---------------------------TCT-------------------------------------------------------------------------------AAAACCAA------ACTAC-GCT-AGTCGC--CT-GT-GC-------------T-------CCCC------------CTTTTTGCTT-----------------------------------------------------ATTTT------------------AAAGTATATGCCAAAATATTATCTCC------A----A------AAAGAAG----------------AGCGA-----------------------------------T----------------------------------------------------------------AAATGTGATT--C---------TTT--TTTTTTCG----------------TACAA-ATGAAGTTTT---T--TC--GATAATTGTGTGC-AAAAGAGTGAGACGTAAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
ACGACGTTTT-ATTCATTCTGTGCTAGATTTCCCTATAGTTCAAATCAGAGGTAAAGC-C----------------------------------------------------CTGAAGCAAATAGAAACGAAAGTACCA--------------------------------GA-AATCC---------------------------ATT-------------------------------------------------------------------------------AAAATAAAATTG---TAATACCC-AAGT--TGTTAA-------------------------------------------CTTTGTCT-----------------------AGTTGGAA----------------------ATTT------------------------------CAATATATTGCGCCC----TTA----C------ACAAATA----------------GGAAA-------------------------------------AAGGGTCAA--------------------------------------GGC-------CGAGTGAAAT-----TGTGT--------T-T-T---TTTTG----------------TACAA-ATTAAGTTCTGGTCTGTTAAAATAAACGTGTGC-ACAGGAGTAAGGTTTAAGSizeHit CountTotal NormTotal
No Reads
droBia1
ACGACGTTCT-ACTCATTCTGTGCTAGATTTCCCGATAGTTCAAACCAGAGGTAAAGC-CA---------------------------------------------------CCGA-GC-AACCGAAAGAAGAATACCT--------------------------------AA-AATCC---------------------------GCA-------------------------------------------------------------------------------AAACCCAGGCTG---CCAC-GCG-CAGTGTTGTTAGT-CA-------------C-------TG--------------CCTTTTATTC-----------------------------------------------------ATTTT------------------AATATACTTCCGGAAGCGTTGGGTCC------A----G------AAGGAAA----------------GGATA-------------------------------------AAGTGGAAA--------------------------------------GCC-------CGAGTGAAAT-----AGTGT--------T-T-T-TTTTTCG----------------ACCGA-ACACAGTTTT---ATATTGGGACAA---AGTGT-ACAAGAGTGAGACGTGAGSizeHit CountTotal NormTotal
No Reads
droTak1
ACGACATTTT-ATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGC-CC---------------------------------------------------CGGAAGGGAATCGAAACAAAAATACCT--------------------------------GA-AATTC---------------------------GCT-------------------------------------------------------------------------------ATAACTAA-----CACAAC-GCTGCAGT--TTTTAAT-GT-------------T-------GG--------------CTCTTTGCTA-----------------------------------------------------ATTTT------------------AATATATTTCGAAAAGTATTGGGTCC------A----A------AAAGAAG----------------GGG-T-----------------------------------GA-AATACTAA--------------------------------------TGC-------CCAGTGAAAT-----TGTGT--------T-T-T--TTTTCG----------------TACGA-ATCAAGTTTT----TATTGAGATAAAAGTGTGT-ACAAGTGTGAGACGTAAGSizeHit CountTotal NormTotal
No Reads
droEle1
ATGACATTTT-ATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGC-CC---------------------------------------------------CCGAAGCGAATCGGAACGAAAATACCA-------------------------------AGA-AATTC---------------------------GCT-------------------------------------------------------------------------------AAAACCAAACCC---CAAAA---------------GC-GT-------------T-------TG--------------CTCTTTGCTA-----------------------------------------------------ATTTA---C--------------AATTTTTTTGCGAGAATATTGGGTCT------A----A------AAAGAAA----------------GGAGA-------------------------------------------AAA--------------------------------------AAT-------CGAGTGAAAC-----GGTGT--------T-T-TTTGCCTCG----------------TACGA-ATCGGGTTCT---TCGTTGAGATAAAAGTGTGC-TTAAGAGTGAGACGTAAGSizeHit CountTotal NormTotal
No Reads
droRho1
ACGACATTTT-ATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGC-CC---------------------------------------------------CCGAAGCAAATCGAAACGAAAATACCA--------------------------------AA-AATCC---------------------------GCTA------------------------------------------------------------------------------AAAACCAAATCC---CAAGACCT-AAGT--TGTTAGC-GT-------------T-------TG--------------CTATTTTCTA-----------------------------------------------------AATTA------------------AATATATTTGCGAGAGTATTGGGTCC------A----A------GAAAAAA----------------GGAAA-----------------------------------GAAAAAGCCAA--------------------------------------TGC-------CGAGTGAAAC-----GGTGT--------T-T-T--TTTTCG----------------TACAA-ATCGAGCTCT---CAGTTGAGATAAAAGTGTGC-TTAAGAGTGAGACGTAAGSizeHit CountTotal NormTotal
No Reads
droFic1
TTGACATTTT-ATTCATTCTGCGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGC-CC--------------------------------------------------CCCGAAGCAAACCGAAACGAGAAAACCA--------------------------------GA-AATCC---------------------------TCT-------------------------------------------------------------------------------TAAATTAAACCA---AAAAGGCC-AAGT--TGTTAAAATT-------------T-------TA--------------CTATTTGCTC-----------------------------------------------------ATTTT------------------TATATATTTCCGGAAATATTGGGTCC------A----A------AAAGCAG----------------GGAGG------------------------------------AGAACA-CAG--------------------------------------AGC-------CTAGTGAATC-----GGTAT--------T-T-TT------A----------------TACGA-ATCGAGTTCT---CCGTCGAGATACAAGTGTGC-ACAAAAGCGAGACGTAAGSizeHit CountTotal NormTotal
No Reads
droKik1
ATGACATTTT-ATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAGC-CC----------------------------------------------------CGAAACAA------ACGAAAGAA--TAAGAGT--C-TCCGC------ATC----------------------------------------------------------GAAAGCGAAAACGAGAAAAGAAAAGCCAGGCGCATCAGCGATTTGTAACGAGTATGGAAAATCCGCTAA--GCAA------ATAA---------------------TTACCGTTAAACGGTGATTCTTCTCCCTCTCTCTCTAACTCTCTGTCTATATCCAAGTTTTATCCTGATTTCCTGTGGA--ATTGC---A---------------T------------------AAAGTATACATCA------TATTCTT------G----A------AGA--------------------------------------------------------------------AAG--------------------------------------TGC-------CGAGTGAAAC-----GGGTT--------T-T-TTT--TTCTTGCTTT-----TC--TT-CG----------------AGTTGAGATAAAAG--TGCCAAGAGAGTGAGACGTAAGSizeHit CountTotal NormTotal
No Reads
droAna3
ATGACATTTT-ATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAACC-GA-----------------------------CAAAT---------------------------------------AA--TACGAGA--ATTACGAAGGCGTAGCGAACGCT-AA-AATCT-ACTTCAAAGAAAA-------------AC-CGAAA----A--------------------------------------------AGACCGTT----------------------------------------AGAAT--CTATAAA-C----------------------------------------------------------TTTATCGTTATTT------------------ATTA--------ATTATAAATAATTTTCTTCATTTCT-----------TCGTTTTAATCC----TTCCCAAAAAAAGTAAAAGAAA----------------GGAGAAAAAGAAAATAAGAATAGAAAAGAAAAAGTGGAAAATAAACGGAAA--------------------------------------AAC-------CGAGTGTAAC-----GGTTTCCATTTCCTTT-T-TTTTTCT---------GGCCATGT-CGAGTTGAGGTTCT---CTTTCGAGATAAA--AGTGC-GCAAGAGTGAGACGTAAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAA--AGTGC-GCAAGAGTGAGAC.....2412.002000002
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCATTTCT-----------TCGTTTTAATC.................................................................................................................................................................................................................................................................2111.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAAACGGAAA--------------------------------------AAC-------CGAGTGTAAC-----G...................................................................................................2711.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAAGAAAATAAGAATAGAAAA...........................................................................................................................................................................................2411.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTAAAAGAAA----------------GGAGAAAAAGA...........................................................................................................................................................................................................2511.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATAAA--AGTGC-GCAAGAGTGAGAC.....2511.001000001
droBip1
GTGACATTTT-ATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAAACC-GA-----------------------------CATAT---------------------------------------AA--TACGAGA--ATTACGA------AGCGAACGCC-AAAAATCTTACCCCAAAAAAAAAAAGAAAGAAACACC-CGAAA----A--------------------------------------------TAACAATT----------------------------------------AGAAT--TATTAAA-CT-------------T----------------------------------------------ACCGTTATAT------------------ATTA--------ATTAC------------------AATTTTTTTTCT-ACGTTTTATCCCCTCCTCCCCACTA------AAAGAAA----------------AGTGG--------------------------------CAACTAAACG-AAA--------------------------------------AAC-------CGAGTGAAAC-----GGTTACCT-----T-T-T-TTTTATT-----TGCTGGCCATGT-CGAGTTGAGGTTCT---CTTTCGAGATAAA--AGTGC-GCAAGAGTGAGACGTAAGSizeHit CountTotal NormTotal
No Reads
dp5
ATGACATTTT-ACTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAACACA-------------------------------AA-----------------------------------------------TCGAGGAGATTAC---------------GGC-AGTAA---AACCCCCAAGTAAATAAGAAAGAGCCAGC-AGACA----ACCAAAAAC-------------CAAAAACCAAAC------------------------------------CAAACCAAACCAAAACCAC-GCT-CAACGC-----------------------TCAATA-------------------CCTCCGCCT-----------------------AAAA---AAT-----ATCCAGAACTAAAGT--------AAATTCAAGAAATTTCATTGATTTT-----------CG--------------G------CAAGAAGTGTGTGTGCTGTGCCACGAGGAAACGAAC----------------------------------------------------------------------------GTA-------CGAACGCAAT-----TG--T--------T-T------TTCCTGAATT----------------------TCCC---CCCTTCACCCAATAAAGTGC-GCAAGAGTGAGACGTAAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............ATTCTGTGCTAGATTTCCCGATAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000200
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGTGTGTGTGCTG...........................................................................................................................................................................................................................1811.0010100000000
...................TGTGCTAGATTTCCCGATAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
ATGACATTTT-ACTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAACACA-------------------------------AA-----------------------------------------------TCGAGGAGATTAC---------------GGC-AGTAA---AACCCCCAAGTAAATAAAAAAGAGCCAGC-AGACA----ACCAAAACC-------------CAAAAAT-----------------------------------------CAAACCAAACCAAAACCAC-GCT-CAACGC-----------------------TCAATA-------------------CCTCCGCCT-----------------------AAAA---AAT-----ATCCAGAACTAAAGT--------AAATTCAAGAAATTTCATTGATTTT-----------CG--------------G------CAAGAAGTGTATGTGCTGTGCCACGAGGAAACGAAC----------------------------------------------------------------------------GTA-------CGAAAGCAAT-----TG--T--------T-T------TTCCTGAATT----------------------TCCC---CCCTTCACCCAATAAAGTGC-GCAAGAGTGAGACGTAAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
ATGACATTTT-CTTCATTCTGTTCTAGATTTCCCGATAGTTCAAATCAGAGGTAAAAC-CC----------------------------------------------------CATAACGCAACGGAACAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................TAGTTCAAATCAGAGGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001
droVir3
TTGGCATTTCCATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAACAGAGC---------------------------------------------------AAAAAGCCATTCAAATTTAATATAAAT--------------------------------AA-AATCC--------------------------AGC-AAATACCGAACCAATACC-------------CAAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------A------------------------------------AAAACA-CAATTAATATCTAAA--TAATAATTGATTTGCTCAATTTGGAGC-------TCA--GAAATA----GTTGT--------T-TTTTT--TA-----ATT---------------------GTTCT---T--T------AA--AAGTGC-GCAAGAGTGAGACGTAAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...GCATTTCCATTCATTCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002020000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--T------AA--AAGTGC-GCAAGAGTGA........2011.001000000000000000000000000000000000000000000000000000000000001000
...................................................GTAACAGAGC---------------------------------------------------AAAAAGCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
..................................................GGTAACAGAGC---------------------------------------------------AAAAAGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
................................................GAGGTAACAGAGC---------------------------------------------------AAAAAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
...........................................AATCAGAGGTAACAGAGC---------------------------------------------------AAAAAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000100
.................................................AGGTAACAGAGC---------------------------------------------------AAAAAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000100
droMoj3
ATGGCACGCTCATTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAATAAAGAAAAAAGAGAAGACAGAAAAACGCCAACCACAAAC-----------------------------------AATCTAAAT--------------------------------AA-AATCC--------------------------AGCT-------------------------------------------------------------------------------AA-----------AAAA------------------------------------------------------------------------------------------------------------ACCCTGAATTAAAAA--------CAATTGCAATTATTTCATAAATTTG-----------CGCT------A-----G------CAAAA------------------------------------------------------------------------------------------------------------------------ATTAAACA----ATTAT--------T-T-TTT--TA-----ATT---------------------GTTCT---T--T------AA--AAGTGC-GCAAGAGTGAGACGTAAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGC-GCAAGAGTGAGACACC..2220.501001000
droGri2
GTGGCATTTTCAGTCATTCTGTGCTAGATTTCCCGATAGTTCAAATCAGAGGTAACAAAGAAGAA----AAGAAAG--------CATTCAATAATAATATAAATAAAATCCCACAAAAAGAACCGAACC--------------------------------------------------------------------------------------------AATGCCAAAAACAACAACAAAAAAAACATT-------------------------------------AAAAT------------------------------------------------T----------------------------------------------AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATGTAAAAAAAATAAACGTTTTCCTTAACTTTGAGAGCAGCAACATTCGCAAT-----TGCTT--------T-T-T--TTTTTG--AATT---------------------GTTCT---T--T------GA--AAGTGC-AAAAGAGTGAGACGTAAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 10:02 PM