ID:

dsi_29000

 Coordinate:

3r:13301372-13301543 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [3r_13301544_13301985_+]; CDS [3r_13301544_13301985_+]; CDS [3r_13301226_13301371_+]; exon [3r_13301180_13301371_+]; intron [3r_13301372_13301543_+]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAAGTCTCGAAAGTCTCTTTCGGGGGCGGCGCCCTGTGCGCGAACTACGGGTAAGGGAAATCTTAACAAATGCAATTACTCTCGTACACAGAAAGAAAATACTTTGGCATTTAATAAAAAAAAAATCTAGAAAGTATTGCTGAAAGTACGAATTTGTAAATTAAAATAGTGGGAAAATGTTTAAGATTGTATTTATCTCTAATTTCATATATTCTGTTTCAGTTTTGATTTGGAGGAGGGAATTCAGACGGTGCACGAGGCCCTAAAGTCAG
**************************************************.(((((....)))))((((((..........((((((......((..((((((((.........................)))))))).))....))))))))))))......((((((.........(((..((((.......))))..)))..........))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 M025
embryo
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
.............................................TACGGACAAGGGAAATCT................................................................................................................................................................................................................. 18 2 4 8.50 34 27 7 0 0 0 0 0 0 0 0
.............................................TACGGATAAGGGGAATCT................................................................................................................................................................................................................. 18 2 3 6.33 19 12 6 0 1 0 0 0 0 0 0
.............................................TACGGGCAAGGGGAATCT................................................................................................................................................................................................................. 18 2 4 6.25 25 16 6 0 1 0 0 2 0 0 0
...............................................................................................................................................................................................................................TTTGATTTGGAGGAGGGAATTCAGA........................ 25 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
............................................CTACGGACAAGGGGAATCT................................................................................................................................................................................................................. 19 3 9 1.78 16 12 3 0 1 0 0 0 0 0 0
...........................................ACTACGGACAAGGGGAATCT................................................................................................................................................................................................................. 20 3 5 1.20 6 6 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TGGAGGAGGGAATTCAGACAGTGCACGA.............. 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GTTGATTTGGAGGAGGGAATTCAGAC....................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TTTGGAGGAGGGAATTCAGAC....................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TTTGATTTGGAGGAGGGG............................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................ATTTGGAGGATGGAATTCAGAC....................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TACGGTTTTGATTTGGAGGAGGGAATT............................ 27 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..........AAGTCTCTTTCGGGGGCGGCGCC............................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................GGTGCACGAGGCCCTAAAGTC.. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................TTTCGGGGGCGGCGCCCTGTGCGCGA..................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................GTACGGGCAAGGGGAATCT................................................................................................................................................................................................................. 19 3 9 0.78 7 4 2 0 1 0 0 0 0 0 0
............................................GTACGGACAAGGGAAATCT................................................................................................................................................................................................................. 19 3 20 0.65 13 7 6 0 0 0 0 0 0 0 0
............................................GTACGGATAAGGGGAATCT................................................................................................................................................................................................................. 19 3 10 0.50 5 4 0 0 1 0 0 0 0 0 0
.............................................TACGGATAAGGGGAATCTG................................................................................................................................................................................................................ 19 3 13 0.46 6 3 1 0 2 0 0 0 0 0 0
..................................................................................................................TAAAACAAAAATCTCGAAAGTCT....................................................................................................................................... 23 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0
......................................................................................................TTCGGCATTTAATAAAAA........................................................................................................................................................ 18 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0
......................................................................TGCATTTATTCTCGTACACAAAA................................................................................................................................................................................... 23 3 6 0.17 1 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................TCTCTGATTTCATATATTTT......................................................... 20 2 7 0.14 1 0 0 0 0 0 0 0 0 1 0
...............................................................................................................................................................ATAAAAATAGTGGGA.................................................................................................. 15 1 20 0.10 2 0 0 0 0 2 0 0 0 0 0
.....................................................................................................................................................................................TAAGACTGTATTGATCT.......................................................................... 17 2 11 0.09 1 0 0 0 0 0 0 0 1 0 0
.......................................GCGAACTAAGGGTTTGGGA...................................................................................................................................................................................................................... 19 3 12 0.08 1 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................ATAAAAATAGTGGGAA................................................................................................. 16 1 13 0.08 1 0 0 0 0 1 0 0 0 0 0
.............................................TACGGACAAGGGGAATCTT................................................................................................................................................................................................................ 19 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................GGCGTTTAAGAAAAAAAAA.................................................................................................................................................... 19 2 14 0.07 1 0 0 0 0 0 0 0 1 0 0
......................................................................................................TTCGGCTGTTAATAAAAAAAA..................................................................................................................................................... 21 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................GAATGAAAATACTTT....................................................................................................................................................................... 15 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

GTTCAGAGCTTTCAGAGAAAGCCCCCGCCGCGGGACACGCGCTTGATGCCCATTCCCTTTAGAATTGTTTACGTTAATGAGAGCATGTGTCTTTCTTTTATGAAACCGTAAATTATTTTTTTTTTAGATCTTTCATAACGACTTTCATGCTTAAACATTTAATTTTATCACCCTTTTACAAATTCTAACATAAATAGAGATTAAAGTATATAAGACAAAGTCAAAACTAAACCTCCTCCCTTAAGTCTGCCACGTGCTCCGGGATTTCAGTC
**************************************************.(((((....)))))((((((..........((((((......((..((((((((.........................)))))))).))....))))))))))))......((((((.........(((..((((.......))))..)))..........))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
....AGAGCTTGCTGAGAAATCCC........................................................................................................................................................................................................................................................ 20 3 3 0.33 1 1 0 0 0
..TCAGAGGTTCCAGAGTAAGC.......................................................................................................................................................................................................................................................... 20 3 5 0.20 1 0 1 0 0
.....GAGCTTGCTGAGAAATCCC........................................................................................................................................................................................................................................................ 19 3 10 0.10 1 1 0 0 0
...........TCAGAGCAAGCCTCCGC.................................................................................................................................................................................................................................................... 17 2 13 0.08 1 0 0 1 0
.....................................GGCGCTTGATGCCAA............................................................................................................................................................................................................................ 15 2 20 0.05 1 1 0 0 0
..TCAGAGGTTCCAGAGTAAG........................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0
....................................CCGCGCTGGATGCCC............................................................................................................................................................................................................................. 15 2 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:13301322-13301593 + dsi_29000 CAAGTCTCGAAAGTCTCTTTCGGGGGCGGCGCCCTGTGCGCGAACTACGGGTAAGGGAAA--------------TCTTAACAAATGCAATTACTCTCGTACACAGAAAGAA-----------AATACT------TT-------------------------------------------------GGCATTTAATAA--AA----------------------------------------------------------------------------------------------------------------------------A-----------------------AAAAATCTAGAAAGTA---------TTGCTGAAAG---------------------------------------------------TACGAATTTGTAAATTAAA-A-TA----------------------------------------------------------------GTGG-GAAAATGTTTAAGA-----------TTG-------TATTTA---------------------------------------------TCTCTAA--------------------TTT---CA----------------------------------------------------------------TATAT-------------------TCTGTTTCAGTTTTGATTTGGAGGAGGGAATTCAGACGGTGCACGAGGCCCTAAAGTCAG
droSec2 scaffold_0:14164413-14164691 + CAAGTCTCGAAAGTCTCTTTCGGAGGCGCCGCCCTGTGCGCGAACTACGGGTAAGAGAAA--------------TCTTAACAAATGCAATTACTCTCGTACACAGAAAGAA-----------AATATT------TC-------------------------------------------------GGCATTTAAAA----A----------------------------------------------------------------------------------------------------------------------------A-----------------------AAAAATCTAGAAAGTACGAATATTTAATACGAAAA---------------------------------------------------TACGAATATTTAGTTTAAA-A-TA----------------------------------------------------------------GTGG-GAAAATGTTTAAGA-----------TTG-------TATTTA---------------------------------------------TCTCTAA--------------------TTT---CA----------------------------------------------------------------TATAT-------------------TCCGTTTCAGTTTTGATTTGGAGGAGGGAATTCAGACGGTGCACGAGGCCCTAAAGTCAG
dm3 chr3R:7805693-7805970 - CAAGTCTCGAAAGTCTCTTTCGGAGGCGGCGCCCTGTGCGCGAACTACGGGTAAGAGAAA--------------TCTTAACAAATTCAATTACTCCCGTACACAGAAAGAA-----------TATTTTCTTTCTTT-------------------------------------------------GGCATTTAATA----A--------------------------------------------------------------------------------------------------------------T-------------A-----------------------AAAATTCTAGAAAGTA---------TTGCTGAAAG---------------------------------------------------TACGAATTCGTAATTTAAA-A-TA----------------------------------------------------------------ATGGGGAAAATGTTTGAGA-----------TTG-------TATTCA---------------------------------------------TCTCTAA--------------------TTT---CA----------------------------------------------------------------TATAT-------------------TCCCTTTCAGTTTTGATTTGGAGGAGGGTATTAAAACTGTGCACGAGGCCGTAAAGTCAG
droEre2 scaffold_4770:13814675-13815027 + CAAGTCTCGAAAGTCTCTTTCGGAGGCGGCGCCCTGTGCGCGAACTACGGGTAAGAGAAA--------------TCTTCGCAAATTCCACTACTCGCGTACACAGAAAGAA-----------AACATT------TT-------------------------------------------------GGCCTTTATTTGAAAA-TCGATG--------------TCTAATT-GTTGAAATCAAAAGAT---ATTTTA--------------------------------------------------------T-------------A-------------------------------------------------------------------TAAAGTCTGCTTTGTTATAACGT-----------TGTTATTC-----------------CTTAAGGAAATTCATTAATTTAAATTGCAGTTTCATCATACGTTATTAGCAGTTATTCAAGTTTTATTAATATA------------CAAA-----------TTG-------TATTAA---------------------------------------------TCGTTAT--------------------GGT---CA----------------------------------------------------------------TATAT-------------------TCCCTTTCAGCTTTGATTTGGAGGAGGGTATCGAAACGGTGCACGAGGCCCTGAAATCGG
droYak3 3R:12119070-12119363 - CAGATCTCGACAGTCTCTTTCGGAGGCGGCGCCCTCTGCGCGAACTACGGGTAAGAGAACTATGGCAAAAGTAATTGGCACAAATTCAATTACTCTCGTACACAGAACGTA-----------AATCTT------TT-------------------------------------------------GGCTTTTATTAA--GAACCA------AATTATT----------------------------AGTACTTTA--------------------------------------------------------T-------------A-----------------------GAAAGTTTACAGAGTT---------TTGCTGAAAA---------------------------------------------------TACTAATTTTTACTTTAAA---------------------------------------------------------------------------------------G-----------TTA-------CATTTA---------------------------------------------TCTTTAA--------------------TTT---CA----------------------------------------------------------------CATATTCCCT------------TTTCCCTTTTAGCTTCGATTTGGAGGAGGGTATTGAGACGGTGCACGAGGCCCTGAAATCAG
droEug1 scf7180000409615:23099-23338 - CAAGTCTCGAAAGTCTCTTTCGGAGGCGGCGCCCTCTGCGCCAACTACGGGTAAGAGAAA--------------TCTTAGCAAATTGAATTATTCTTATACACAGAAAGAAA----------TATGTT------T------------------------------------------------ATGGAAACTAATA----A----------AAAAACT-------------------------------------------------------------------------------------------------------------------------------------------A----GTA---------TTTC-------------------------------------------------------------------------------------------------------------------------------------------------ATGG-G----------AGA-----------TCGCTATTATTATTCA---------------------------------------------TCCAATA--------------------TTTTATTA----------------------------------------------------------------TAT-----------------TATTTTCCCTTTAGCTTCGAACTGGATGAGGGCATCCAGACGGTTCATGAGGCACTAAAATCAG
droBia1 scf7180000302402:10012471-10012816 + GAAGTCTCGAAAGTCTCTTTCGGAGGCGGCGCCCTGTGCGCCAACTACGGGTAAGAGAAA--------------TCTTCTCAAATTAAATTACACTTCTACACGCGGAAAAA----------TATTTT------TTGAGATCTATACAGATTTTTGCGTAAAATATTTGAAAAATAAAATGATATAGTAACTAATA----A----------GAAAAGTTCTTTCAAATTCCTTGAAAACAAATAATAGTACTTTATAGTAATATAATGCTCATATATT--TGGTTGTTGGG-----------------------------------------------------------------------------------------------------------------TTGGAA--------------------------------TTACAAATTATA-A-TA----------------------------------------------------------------ATCA-AAATTTATTTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTCCCCTCAAGATTTGACCTGGAAGAGGGCATTCAGACCGTACATGAAGCGCTGAAGTCTG
droTak1 scf7180000415245:85393-85572 - GAAGTCTCGAAAGTCTCTTTCGGAGGCGGCGCCCTGTGCGCCAACTACGGGTAAGAGAAA--------------TCTTCTCAAATTAAATTATACTCGTACACGGAAAAAA-----------TATATT------TTATGATCTATAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATACCCGTTACTCGTAGAG--------------------------------------------------------------------------------------------------------------------------------------------TAAAAGGGTATACTAGATTCGTGCAAAAGTATGTAA------
droEle1 scf7180000490967:286414-286773 + GAAGTCTCGAAAGTCTCTTTCGGCGGCGGCGCCCTCTGCGCCAACTACGGGTGAGAGGGA--------------TATTTTTCAATTCAATTTATCTTCTACACAGGAAGAAATAAA-TA-----TTTTTTTTC--T-------------------------------------------------GAGATTAATTTAACAG-TCCAAGATC--TAAAACCTTCTAAATCCCT-A-------------------------AATATATCGCTTGTGTGTGTATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCGGGTTTTTTTAATCTT------------TAAA-----------ACG-------TTTTACCTAAAATTTTTTTAAAATATTGTATTTAAATTTGTTGCTTTTTTATGGATAA--------------------GGT---A----AATTTGATTCCCGTTAAAAAATGT---------------------------------------------------------TG-TTTATCTTCAGCTTTGAACTTGAGGAGGGTATCAAGACAGTGCATGAGGCTCTGAAATCGG
droRho1 scf7180000779157:23675-24089 + AAAGTCTCGAAAGTCTCATTCGGAGGCGGTGCGCTCTGCGCCAACTACGGGTAAGAGAAA--------------TCTTTTCCAGCTGAATTTTACTACTACACAGAAAAAAG-AAT-TA-----TTTATTTTC--T-----------------------------------------------------------TGAAGG-GCG---------------------------------------------------------------------------------TTGGACTAAATTCAA------T-GAAGTGCATTAAAACAAACAATTTAAAAGCTTTATGACGTAAAAATATAAAAATTAATCATTTTTAATACGAATAATTTTCTATTAAACTATGATTTGGGATAACCT-----------ATT---TC-----------------CGTA-GGA----------------TACCAATTTCA-------------------------------------------------------------------------------------------TACTAAAAAATATAATTTACATTTATTTTTTCTTT-------------------------------------------------------AAAAATGTTGAACTTTTAATGGAACTTGAACATGTCTAAAATTCATATC-----------------ATTTATAACACAGCTTTGAACTTGAAGAGGGCATCAAGACTGTGCATGAGGCCCTGAAGTCGG
droFic1 scf7180000453812:1323018-1323324 + GAAGTCTCGAAAGTCTCTTTCGGAGGCGGCGCCCTCTGCGCCAACTATGGGTAAGAGAGA--------------TCTTTGTCGATTGAATTAATCTT-TGCACAGAGAAAAACAAAATAGTGAATAGT------TT-------------------------------------------------GCCATTCAATG------------------------------------------------------------------------------------------------------------------AAATGCGT-----------------------------------------AAGGT----------------------------------------------TAACTTTAAAATAATTTTGGTTTACAACGAATATTAAAATCCCAAA-AG----------------------------------------------------------------ATTT-GAAAGTTTTCAACAAAATTTCAACCTCT-------GTTTAA---------------------------------------------TATTTTT--------------------T--TTACA-------------------AAAAATG------------------------------------------------------------TTTTATTTTTAGCTTTGATCTTGAAGAAGGCATCCAGACAGTTCATGAAGCGCTGAAATCGG
droKik1 scf7180000302255:282351-282448 - TATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATAT-----------TTA-------TATTTA---------------------------------------------TATTTAA--------------------A--TAACA----------------------------------------------------------------AATA-----------------ACCTCCTTTACAGTTTTGAACTCGAAGAGGGTATCCAGACGGTGCACGAAGCTCTAAAATCGG
droAna3 scaffold_12911:2617294-2617501 + GAAGTCTCGAAAGTTTCATTTGGAGGAGGTGCCCTGTGCGCTGCTTATGGGTATGAGTAA--------------TTTTTATT-----------------T---------------------------------------------------------------------------------------------TAC----A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------AATGCA------GCTTCTCTAATAAA---------------------------------------------TACATTTTTGTATTATTTTAAATCTAATTT---AATTTAATTTGA------------------------------------------------------TA------------CCTGCCTGTTTACTCCAAAGCTTTGACCTCGAGGAGGGCATTAAGACAGTGCACGAGGCTTTAAAATCTG
droBip1 scf7180000396714:489049-489255 - GAAGTCTCGAAAGTCTCGTTCGGAGGCGGGGCTCTGTGCGCTGCCTATGGGTAAGAGCAA--------------TCTTTATT-----------------A---------------------------------------------------------------------------------------------TTC----A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------AATGCA------GCACTTTAATTAAA---------------------------------------------TACACTTTTTAATCATTTTAAATCAAAA-A---AATTTATTTTAT------------------------------------------------------TA------------CTTGCTTATTTATTCCAAAGCTTTGATTGCGAAGAGGGAATTAGGACCGTGCACGAGGCTTTAAAGTCTG
dp5 2:22558642-22558817 - GAAGTATCGAAGATTTCATTCGGTGGCGGTGCGCTGTGTGCCAACTATGGGTAAGAGATA--------------TAC--ATATTTTTAATCGATCTCTTATGCGGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAAAA---------------------------------------------------TAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA----------------------------------------------------------------CATGTTCTCT-------------TTCTGCTTCAGTTTTGATCTAGAAGAGGGCATCAAAACAGTGCAGGATGCCTTGAAATCGG
droPer2 scaffold_3:5337868-5338039 - GAAGTATCGAAGATTTCATTCGGTGGCGGTGCGCTGTGTGCCAACTATGGGTAAGAGATA--------------TATT------TTTAATCGATCTCTTATGCGGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAAAA---------------------------------------------------TAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA----------------------------------------------------------------CATGTTCTCT-------------TTCTGCTTCAGGTTTGATCTTGAAGAGGGCATCAAAACAGTGCAGGATGCCTTGAAATCGG
droWil2 scf2_1100000004902:2223104-2223292 + GAAATCTCGAAAATCTCTTTCGGTGGGGGAGCATTGTGTAGATTTTATGGGTAAGTAAGA--------------AGCTAAAA------------------------------------------------------------------------------------------------------TCGAAATTATTA----A----------GAGAAGC-----------------------------------------------------------------------------------AGTAAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTAA-----------GAG-------AATTAA---------------------------------------------GTCCAAT--------------------GCA---------------------------------------------------------------------AATA-----------------ATTACTCTCACAGGTTTGATCTGGATGAGGCAATTAAGACAGTGCATGCGGCCTTGAAATCGG
droVir3 scaffold_13047:1664796-1664970 + dvi_15145 GAAATCTCCAAAATAGCGTTCGGGGGAGGGGCGCTCTGTGCCAATTATGGGTGTGTTTTTAATGGGAAAAATAA--------------------------------------------------------------------------------------------------------------C---------------A----------TAGAAAC-----------------------------------------------------------------------------------AGAAATG-GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------TATGTATGTGTAAATTTGTT---TGTTTATGCAGCTTCGACCTGGAGGAGGGCATTAAAACAGTGCACGACGCTTTGAAAGCTG
droMoj3 scaffold_6540:5685040-5685198 + GAAATCTCTAAAGTTGCTTTCGGTGGCGGAGCTCTTTGCTCTAACTATGGGTATGCGTGA-------AAGAGAA--------------------------------------------------------------------------------------------------------------TGATAGAT-------------------------C-----------------------------------------------------------------------------------GGAAATTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------TATGTATTCT-------------TATTGCTACAGCTTCGATCTGGATGAGGGCATAAAAACAGTTCACGAGGCGCTGAGAGCTG
droGri2 scaffold_15074:6100777-6100944 - GAAATTTCGAAGCTCGCGTTTGGTGCAGGAGTGTTCTGTTCCAACTACAGGTGTGCTTGCAATA--------AA--------------------------------------------------------------------------------------------------------------TGATAAATTAAA----T----------GAAAAAC-----------------------------------------------------------------------------------AGTTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTT--------------------TTT---GT----------------------------------------------------------------GTTAT-------------------GCTGATGCAGCTTTATGGAGAAGGAGGCAATTCGAACCGTGAACGAGGCGCTCAAGTCTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CAAGTCTCGAAAGTCTCTTTCGGGGGCGGCGCCCTGTGCGCGAACTACGGGTAAGGGAAA--------------TCTTAACAAATGCAATTACTCTCGTACACAGAAAGAA-----------AATACT------TT-------------------------------------------------GGCATTTAATAA--AA----------------------------------------------------------------------------------------------------------------------------A-----------------------AAAAATCTAGAAAGTA---------TTGCTGAAAG---------------------------------------------------TACGAATTTGTAAATTAAA-A-TA----------------------------------------------------------------GTGG-GAAAATGTTTAAGA-----------TTG-------TATTTA---------------------------------------------TCTCTAA--------------------TTT---CA----------------------------------------------------------------TATAT-------------------TCTGTTTCAGTTTTGATTTGGAGGAGGGAATTCAGACGGTGCACGAGGCCCTAAAGTCAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATTTGGAGGAGGGAATTCAGA........................2512.00200000002000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGAGGAGGGAATTCAGAC.......................2111.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATTTGGAGGAGGGG...............................1811.00101000000000000000
..........AAGTCTCTTTCGGGGGCGGCGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCACGAGGCCCTAAAGTC..2111.00100010000000000000
.................TTTCGGGGGCGGCGCCCTGTGCGCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
droSec2
CAAGTCTCGAAAGTCTCTTTCGGAGGCGCCGCCCTGTGCGCGAACTACGGGTAAGAGAAA--------------TCTTAACAAATGCAATTACTCTCGTACACAGAAAGAA-----------AATATT------TC-------------------------------------------------GGCATTTAAAA----A----------------------------------------------------------------------------------------------------------------------------A-----------------------AAAAATCTAGAAAGTACGAATATTTAATACGAAAA---------------------------------------------------TACGAATATTTAGTTTAAA-A-TA----------------------------------------------------------------GTGG-GAAAATGTTTAAGA-----------TTG-------TATTTA---------------------------------------------TCTCTAA--------------------TTT---CA----------------------------------------------------------------TATAT-------------------TCCGTTTCAGTTTTGATTTGGAGGAGGGAATTCAGACGGTGCACGAGGCCCTAAAGTCAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGATTTGGAGGAGGGAATTCAGA........................2712.0020020
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGACGGTGCACGAG.............1812.0020020
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATTTGGAGGAGGGAATT............................2111.0010100
.................TTTCGGAGGCGCCGCCCTGTGCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAGGAGGGAATTCAGACGG.....................2211.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGAGGAGGGAATTCAGACGGT....................2511.0010100
dm3
CAAGTCTCGAAAGTCTCTTTCGGAGGCGGCGCCCTGTGCGCGAACTACGGGTAAGAGAAA--------------TCTTAACAAATTCAATTACTCCCGTACACAGAAAGAA-----------TATTTTCTTTCTTT-------------------------------------------------GGCATTTAATA----A--------------------------------------------------------------------------------------------------------------T-------------A-----------------------AAAATTCTAGAAAGTA---------TTGCTGAAAG---------------------------------------------------TACGAATTCGTAATTTAAA-A-TA----------------------------------------------------------------ATGGGGAAAATGTTTGAGA-----------TTG-------TATTCA---------------------------------------------TCTCTAA--------------------TTT---CA----------------------------------------------------------------TATAT-------------------TCCCTTTCAGTTTTGATTTGGAGGAGGGTATTAAAACTGTGCACGAGGCCGTAAAGTCAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGATTTGGAGGAGG.................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GCCCTGTGCGCGAACTACGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GCGAACTACGGGTAAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AGTCTCTTTCGGAGGCGGCGCCCTGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAACTGTGCACGAGGC...........2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTATTAAAACTGTGCAC................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCTTTCGGAGGCGGCGCCCTGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGAGGAGGGTATTAAAACTGT....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CTCGAAAGTCTCTTTCGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACGAGGCCGTAAAGTCAG2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AAGTCTCTTTCGGAGGCGGCGCCCTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGAGGAGGGTATTAAAACTGTGC..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..............CTCTTTCGGAGGCGGCGCCCTGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............GTCTCTTTCGGAGGCGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AGTCTCTTTCGGAGGCGGCGCCCTGTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................TGCGCGAACTACGGGTAAGAGAAA--------------TC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTGCACGAGGCCGTA.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTATTAAAACTGTGCA.................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAACTGTGCACGAGGCCGTAAAG....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGAGGAGGGTATTAAAACT......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........GAAAGTCTCTTTCGGAGGCGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CCCTGTGCGCGAACTACGGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTGCACGAGGCCGTAAA.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTTGGAGGAGGGTA..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...........AGTCTCTTTCGGAGGCGGCGCCCTGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......CGAAAGTCTCTTTCGGAGGCGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGAGGAGGGTATTA...........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGCACGAGGCCGTAAAGT...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTATTAAAACTGTGCACGAG.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TA----A--------------------------------------------------------------------------------------------------------------T-------------A-----------------------AAAATTCTAGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGTTTGAGA-----------TTG-------TATTA.....................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................AGAAAGTA---------TTGCTGAAAG---------------------------------------------------TACGT.....................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGAGGAGGGTATTAAA.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................CGAACTACGGGTAAGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................AAAGTA---------TTGCTGAAAG---------------------------------------------------TAC.......................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATTTGGAGGAGGGT...............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGATTTGGAGGAGGGT...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTCGGAGGCGGCGCCCTGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTGCACGAGGCCGTAAAGT...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CTCTTTCGGAGGCGGCGCCCTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCTTTCGGAGGCGGCGCCCTGTGCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCACGAGGCCGTAAAG....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CAAGTCTCGAAAGTCTCTTTCGGAGGCGGCGCCCTGTGCGCGAACTACGGGTAAGAGAAA--------------TCTTCGCAAATTCCACTACTCGCGTACACAGAAAGAA-----------AACATT------TT-------------------------------------------------GGCCTTTATTTGAAAA-TCGATG--------------TCTAATT-GTTGAAATCAAAAGAT---ATTTTA--------------------------------------------------------T-------------A-------------------------------------------------------------------TAAAGTCTGCTTTGTTATAACGT-----------TGTTATTC-----------------CTTAAGGAAATTCATTAATTTAAATTGCAGTTTCATCATACGTTATTAGCAGTTATTCAAGTTTTATTAATATA------------CAAA-----------TTG-------TATTAA---------------------------------------------TCGTTAT--------------------GGT---CA----------------------------------------------------------------TATAT-------------------TCCCTTTCAGCTTTGATTTGGAGGAGGGTATCGAAACGGTGCACGAGGCCCTGAAATCGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........AGTCTCTTTCGGAGGCGGCGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000400
................CTTTCGGAGGCGGCGCCCTGTGCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030300000
...........AGTCTCTTTCGGAGGCGGCGCCCTGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000030
...........AGTCTCTTTCGGAGGCGGCGCCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000200
...........AGTCTCTTTCGGAGGCGGCGCCCTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000110
................CTTTCGGAGGCGGCGCCCTGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000020
..................TTCGGAGGCGGCGCCCTGTGCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGTATCGAAACGGT....................1811.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAACGGTGCACGAGGCC..........1911.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGATTTGGAGGAGGGT...............................2011.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAGGAGGGTATCGAAACGGT....................2311.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAAACGGTGCACGAG.............1811.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAAACGGTGCACGAGGC...........2011.0010001000
.......CGAAAGTCTCTTTCGGAGGCGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
.........AAAGTCTCTTTCGGAGGCGGCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGAGGAGGGTATCGAAACGGT....................2511.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTTGGAGGAGGGTAT.............................1811.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTAATTTAAATTGCAGTTTCATCATAC................................................................................................................................................................................................................................................................................................................2911.0010010000
..............CTCTTTCGGAGGCGGCGCCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
...........AGTCTCTTTCGGAGGCGGCGCCCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
...........AGTCTCTTTCGGAGGCGGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.............................CGCCCTGTGCGCGAACTACGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
......TCGAAAGTCTCTTTCGGAGGCGGCGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
............GTCTCTTTCGGAGGCGGCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGAGGAGGGTATCGAAACGGT....................2411.0010000100
......TCGAAAGTCTCTTTCGGAGGCGGCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGATTTGGAGGAGGGTATCGA..........................2411.0010001000
...........AGTCTCTTTCGGAGGCGGCGCCCTGTGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000010
droYak3
CAGATCTCGACAGTCTCTTTCGGAGGCGGCGCCCTCTGCGCGAACTACGGGTAAGAGAACTATGGCAAAAGTAATTGGCACAAATTCAATTACTCTCGTACACAGAACGTA-----------AATCTT------TT-------------------------------------------------GGCTTTTATTAA--GAACCA------AATTATT----------------------------AGTACTTTA--------------------------------------------------------T-------------A-----------------------GAAAGTTTACAGAGTT---------TTGCTGAAAA---------------------------------------------------TACTAATTTTTACTTTAAA---------------------------------------------------------------------------------------G-----------TTA-------CATTTA---------------------------------------------TCTTTAA--------------------TTT---CA----------------------------------------------------------------CATATTCCCT------------TTTCCCTTTTAGCTTCGATTTGGAGGAGGGTATTGAGACGGTGCACGAGGCCCTGAAATCAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGATTTGGAGGAGGGTA..............................2011.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGACGGTGCACGAGG............1911.00100000010000
.......CGACAGTCTCTTTCGGAGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...................TCGGAGGCGGCGCCCTCTGCGCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTGAGACGGTGCACGA..............1911.00100010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGATTTGGAGGAGGGC...............................1911.00100000010000
........GACAGTCTCTTTCGGAGGCGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGAGGAGGGTATTGAGA........................2111.00100000010000
....TCTCGACAGTCTCTTTCGGAGGCGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
.....CTCGACAGTCTCTTTCGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGGTATTGAGACGGT....................1911.00101000000000
................CTTTCGGAGGCGGCGCCCTCTGCGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
................CTTTCGGAGGCGGCGCCCTCTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.......CGACAGTCTCTTTCGGAGGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCGATTTGGAGGAGGGT...............................2011.00100000010000
............GTCTCTTTCGGAGGCGGCGCCCTCTGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
droEug1
CAAGTCTCGAAAGTCTCTTTCGGAGGCGGCGCCCTCTGCGCCAACTACGGGTAAGAGAAA--------------TCTTAGCAAATTGAATTATTCTTATACACAGAAAGAAA----------TATGTT------T------------------------------------------------ATGGAAACTAATA----A----------AAAAACT-------------------------------------------------------------------------------------------------------------------------------------------A----GTA---------TTTC-------------------------------------------------------------------------------------------------------------------------------------------------ATGG-G----------AGA-----------TCGCTATTATTATTCA---------------------------------------------TCCAATA--------------------TTTTATTA----------------------------------------------------------------TAT-----------------TATTTTCCCTTTAGCTTCGAACTGGATGAGGGCATCCAGACGGTTCATGAGGCACTAAAATCAGSizeHit CountTotal NormTotal
No Reads
droBia1
GAAGTCTCGAAAGTCTCTTTCGGAGGCGGCGCCCTGTGCGCCAACTACGGGTAAGAGAAA--------------TCTTCTCAAATTAAATTACACTTCTACACGCGGAAAAA----------TATTTT------TTGAGATCTATACAGATTTTTGCGTAAAATATTTGAAAAATAAAATGATATAGTAACTAATA----A----------GAAAAGTTCTTTCAAATTCCTTGAAAACAAATAATAGTACTTTATAGTAATATAATGCTCATATATT--TGGTTGTTGGG-----------------------------------------------------------------------------------------------------------------TTGGAA--------------------------------TTACAAATTATA-A-TA----------------------------------------------------------------ATCA-AAATTTATTTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTCCCCTCAAGATTTGACCTGGAAGAGGGCATTCAGACCGTACATGAAGCGCTGAAGTCTGSizeHit CountTotal NormTotal
No Reads
droTak1
GAAGTCTCGAAAGTCTCTTTCGGAGGCGGCGCCCTGTGCGCCAACTACGGGTAAGAGAAA--------------TCTTCTCAAATTAAATTATACTCGTACACGGAAAAAA-----------TATATT------TTATGATCTATAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATACCCGTTACTCGTAGAG--------------------------------------------------------------------------------------------------------------------------------------------TAAAAGGGTATACTAGATTCGTGCAAAAGTATGTAA------SizeHit CountTotal NormTotal
No Reads
droEle1
GAAGTCTCGAAAGTCTCTTTCGGCGGCGGCGCCCTCTGCGCCAACTACGGGTGAGAGGGA--------------TATTTTTCAATTCAATTTATCTTCTACACAGGAAGAAATAAA-TA-----TTTTTTTTC--T-------------------------------------------------GAGATTAATTTAACAG-TCCAAGATC--TAAAACCTTCTAAATCCCT-A-------------------------AATATATCGCTTGTGTGTGTATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCGGGTTTTTTTAATCTT------------TAAA-----------ACG-------TTTTACCTAAAATTTTTTTAAAATATTGTATTTAAATTTGTTGCTTTTTTATGGATAA--------------------GGT---A----AATTTGATTCCCGTTAAAAAATGT---------------------------------------------------------TG-TTTATCTTCAGCTTTGAACTTGAGGAGGGTATCAAGACAGTGCATGAGGCTCTGAAATCGGSizeHit CountTotal NormTotal
No Reads
droRho1
AAAGTCTCGAAAGTCTCATTCGGAGGCGGTGCGCTCTGCGCCAACTACGGGTAAGAGAAA--------------TCTTTTCCAGCTGAATTTTACTACTACACAGAAAAAAG-AAT-TA-----TTTATTTTC--T-----------------------------------------------------------TGAAGG-GCG---------------------------------------------------------------------------------TTGGACTAAATTCAA------T-GAAGTGCATTAAAACAAACAATTTAAAAGCTTTATGACGTAAAAATATAAAAATTAATCATTTTTAATACGAATAATTTTCTATTAAACTATGATTTGGGATAACCT-----------ATT---TC-----------------CGTA-GGA----------------TACCAATTTCA-------------------------------------------------------------------------------------------TACTAAAAAATATAATTTACATTTATTTTTTCTTT-------------------------------------------------------AAAAATGTTGAACTTTTAATGGAACTTGAACATGTCTAAAATTCATATC-----------------ATTTATAACACAGCTTTGAACTTGAAGAGGGCATCAAGACTGTGCATGAGGCCCTGAAGTCGGSizeHit CountTotal NormTotal
No Reads
droFic1
GAAGTCTCGAAAGTCTCTTTCGGAGGCGGCGCCCTCTGCGCCAACTATGGGTAAGAGAGA--------------TCTTTGTCGATTGAATTAATCTT-TGCACAGAGAAAAACAAAATAGTGAATAGT------TT-------------------------------------------------GCCATTCAATG------------------------------------------------------------------------------------------------------------------AAATGCGT-----------------------------------------AAGGT----------------------------------------------TAACTTTAAAATAATTTTGGTTTACAACGAATATTAAAATCCCAAA-AG----------------------------------------------------------------ATTT-GAAAGTTTTCAACAAAATTTCAACCTCT-------GTTTAA---------------------------------------------TATTTTT--------------------T--TTACA-------------------AAAAATG------------------------------------------------------------TTTTATTTTTAGCTTTGATCTTGAAGAAGGCATCCAGACAGTTCATGAAGCGCTGAAATCGGSizeHit CountTotal NormTotal
No Reads
droKik1
TATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATAT-----------TTA-------TATTTA---------------------------------------------TATTTAA--------------------A--TAACA----------------------------------------------------------------AATA-----------------ACCTCCTTTACAGTTTTGAACTCGAAGAGGGTATCCAGACGGTGCACGAAGCTCTAAAATCGGSizeHit CountTotal NormTotal
No Reads
droAna3
GAAGTCTCGAAAGTTTCATTTGGAGGAGGTGCCCTGTGCGCTGCTTATGGGTATGAGTAA--------------TTTTTATT-----------------T---------------------------------------------------------------------------------------------TAC----A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------AATGCA------GCTTCTCTAATAAA---------------------------------------------TACATTTTTGTATTATTTTAAATCTAATTT---AATTTAATTTGA------------------------------------------------------TA------------CCTGCCTGTTTACTCCAAAGCTTTGACCTCGAGGAGGGCATTAAGACAGTGCACGAGGCTTTAAAATCTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGACAGTGCACGAGGCT..........1912.002000002
...GTCTCGAAAGTTTCATTTGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCTGTTTACTCCAAAG..................................................1911.001100000
..........................................................AA--------------TTTTTATT-----------------T---------------------------------------------------------------------------------------------TAC----A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------AATGCA------GCTTCT............................................................................................................................................................................................................................................2811.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------------CCTGCCTGTTTACTCCAA....................................................2011.001100000
droBip1
GAAGTCTCGAAAGTCTCGTTCGGAGGCGGGGCTCTGTGCGCTGCCTATGGGTAAGAGCAA--------------TCTTTATT-----------------A---------------------------------------------------------------------------------------------TTC----A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------AATGCA------GCACTTTAATTAAA---------------------------------------------TACACTTTTTAATCATTTTAAATCAAAA-A---AATTTATTTTAT------------------------------------------------------TA------------CTTGCTTATTTATTCCAAAGCTTTGATTGCGAAGAGGGAATTAGGACCGTGCACGAGGCTTTAAAGTCTGSizeHit CountTotal NormTotal
No Reads
dp5
GAAGTATCGAAGATTTCATTCGGTGGCGGTGCGCTGTGTGCCAACTATGGGTAAGAGATA--------------TAC--ATATTTTTAATCGATCTCTTATGCGGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAAAA---------------------------------------------------TAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA----------------------------------------------------------------CATGTTCTCT-------------TTCTGCTTCAGTTTTGATCTAGAAGAGGGCATCAAAACAGTGCAGGATGCCTTGAAATCGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAACAGTGCAGGATGC...........2013.0030100200000
.....................GGTGGCGGTGCGCTGTGTGCCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
...........GATTTCATTCGGTGGCGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAACAGTGCAGGAT.............1811.0010000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAAACAGTGCAGGATGC...........2111.0010010000000
...........GATTTCATTCGGTGGCGGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...............TCATTCGGTGGCGGTGCGCTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.............TTTCATTCGGTGGCGGTGCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
droPer2
GAAGTATCGAAGATTTCATTCGGTGGCGGTGCGCTGTGTGCCAACTATGGGTAAGAGATA--------------TATT------TTTAATCGATCTCTTATGCGGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTAAAA---------------------------------------------------TAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA----------------------------------------------------------------CATGTTCTCT-------------TTCTGCTTCAGGTTTGATCTTGAAGAGGGCATCAAAACAGTGCAGGATGCCTTGAAATCGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAACAGTGCAGGATGC...........1816.006600000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTGATCTTGAAGAGGGC...............................2016.006500001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAACAGTGCAGGATGC...........2014.004202000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAACAGTGCAGGAT.............1812.002200000
................CATTCGGTGGCGGTGCGCTGTGTGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
.....................GGTGGCGGTGCGCTGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGATCTTGAAGAGGGC...............................1911.001100000
.....................GGTGGCGGTGCGCTGTGTGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...........GATTTCATTCGGTGGCGGTGCGCTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.............TTTCATTCGGTGGCGGTGCGCTGTGTGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCATCAAAACAGTGCAGGATG............2311.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAAACAGTGCAGGATG............2011.001001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGATCTTGAAGAGGGCATC............................2211.001100000
...........GATTTCATTCGGTGGCGGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAAACAGTGCAGGA..............1811.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCTTGAAGAGGGCAT.............................1911.001000001
.....................GGTGGCGGTGCGCTGTGTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------------------------------CATGTTCTCT-------------TTCTGCTTCAG..................................................2211.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAAACAGTGCAGGATGC...........2111.001001000
droWil2
GAAATCTCGAAAATCTCTTTCGGTGGGGGAGCATTGTGTAGATTTTATGGGTAAGTAAGA--------------AGCTAAAA------------------------------------------------------------------------------------------------------TCGAAATTATTA----A----------GAGAAGC-----------------------------------------------------------------------------------AGTAAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTAA-----------GAG-------AATTAA---------------------------------------------GTCCAAT--------------------GCA---------------------------------------------------------------------AATA-----------------ATTACTCTCACAGGTTTGATCTGGATGAGGCAATTAAGACAGTGCATGCGGCCTTGAAATCGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....CTCGAAAATCTCTTTCGGTGGGGGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200200
...........AATCTCTTTCGGTGGGGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200110
...........AATCTCTTTCGGTGGGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGACAGTGCATGCGGCCTT........2111.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGATCTGGATGAGGC................................1811.00100010
.......CGAAAATCTCTTTCGGTGGGGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAAGACAGTGCATGC..............1811.00100010
.......CGAAAATCTCTTTCGGTGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
........GAAAATCTCTTTCGGTGGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
..........AAATCTCTTTCGGTGGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
............ATCTCTTTCGGTGGGGGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAAGACAGTGCATGCGGCCT.........2311.00100010
.......CGAAAATCTCTTTCGGTGGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
........GAAAATCTCTTTCGGTGGGGGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTGCATGCGGCCTTGAA.....2011.00100010
droVir3
GAAATCTCCAAAATAGCGTTCGGGGGAGGGGCGCTCTGTGCCAATTATGGGTGTGTTTTTAATGGGAAAAATAA--------------------------------------------------------------------------------------------------------------C---------------A----------TAGAAAC-----------------------------------------------------------------------------------AGAAATG-GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------TATGTATGTGTAAATTTGTT---TGTTTATGCAGCTTCGACCTGGAGGAGGGCATTAAAACAGTGCACGACGCTTTGAAAGCTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
GAAATCTCCAAAATAGCGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000020
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCATTAAAACAGTGCACGACGCT..........2512.002002000000000000000000000000000000000000000000000000000000000000
....................CGGGGGAGGGGCGCTCTGTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000020000000000000000000000000000000000000000
....................CGGGGGAGGGGCGCTCTGTGCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..............AGCGTTCGGGGGAGGGGCGCTCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000100000000000000000000000000000000000000000
.......CCAAAATAGCGTTCGGGGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........................GAGGGGCGCTCTGTGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCACGACGCTTTGAAAGCT.2211.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCGACCTGGAGGAGGGC...............................2011.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGTGCACGACGCTTTGAAA....2211.001000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGTGCACGACGCTTTGAAAGCT.2511.001000000000000000001000000000000000000000000000000000000000000000
.....................GGGGGAGGGGCGCTCTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGACCTGGAGGAGGGC...............................1911.001000000000100000000000000000000000000000000000000000000000000000
.......CCAAAATAGCGTTCGGGGGAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
.................GTTCGGGGGAGGGGCGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGACCTGGAGGAGGG................................1811.001000000000000000010000000000000000000000000000000000000000000000
................................GCTCTGTGCCAATTATGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACAGTGCACGACGCTTTGAAAGC..2611.001000000000000000000000100000000000000000000000000000000000000000
GAAATCTCCAAAATAGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
.........................GAGGGGCGCTCTGTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.001000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAACAGTGCACGACGCTTT........2311.001001000000000000000000000000000000000000000000000000000000000000
.AAATCTCCAAAATAGCGTTCGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGACCTGGAGGAGGGCA..............................2011.001000000000000000000000100000000000000000000000000000000000000000
............ATAGCGTTCGGGGGAGGGGCGCTCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
.........................GAGGGGCGCTCTGTGCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501000000000000000000000000000000000000001000000000000000000000000
..............................................ATGGGTGTGTTTTTAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18150.071000000000000000010000000000000000000000000000000000000000000000
droMoj3
GAAATCTCTAAAGTTGCTTTCGGTGGCGGAGCTCTTTGCTCTAACTATGGGTATGCGTGA-------AAGAGAA--------------------------------------------------------------------------------------------------------------TGATAGAT-------------------------C-----------------------------------------------------------------------------------GGAAATTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------TATGTATTCT-------------TATTGCTACAGCTTCGATCTGGATGAGGGCATAAAAACAGTTCACGAGGCGCTGAGAGCTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................GCTCTTTGCTCTAACTATGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
.......CTAAAGTTGCTTTCGGTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002100001
............GTTGCTTTCGGTGGCGGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002100001
...........AGTTGCTTTCGGTGGCGGAGCTCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.........AAAGTTGCTTTCGGTGGCGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
...........AGTTGCTTTCGGTGGCGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAAACAGTTCACGAGGCGCTGA......2511.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAAACAGTTCACGAGGCGCT........2311.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCGATCTGGATGAGGGC...............................2011.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATAAAAACAGTTCACGAGGCGCTGA......2711.001100000
..AATCTCTAAAGTTGCTTTCGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...............................CTCTTTGCTCTAACTATGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....CTCTAAAGTTGCTTTCGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGATCTGGATGAGGGC...............................1811.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATAAAAACAGTTCACGAGGCGCT........2511.001100000
......TCTAAAGTTGCTTTCGGTGGCGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
droGri2
GAAATTTCGAAGCTCGCGTTTGGTGCAGGAGTGTTCTGTTCCAACTACAGGTGTGCTTGCAATA--------AA--------------------------------------------------------------------------------------------------------------TGATAAATTAAA----T----------GAAAAAC-----------------------------------------------------------------------------------AGTTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTT--------------------TTT---GT----------------------------------------------------------------GTTAT-------------------GCTGATGCAGCTTTATGGAGAAGGAGGCAATTCGAACCGTGAACGAGGCGCTCAAGTCTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......CGAAGCTCGCGTTTGGTGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCGTGAACGAGGCGCT........1911.00101
..............CGCGTTTGGTGCAGGAGTGTTCTGTTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101
...........GCTCGCGTTTGGTGCAGGAGTGTTCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101

Generated: 05/18/2015 at 11:11 AM