ID:

dsi_28951

 Coordinate:

x:9735635-9735784 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.2 -27.2 -27.1

Flybase annnotation

CDS [x_9735243_9735634_+]; exon [x_9734947_9735634_+]; intron [x_9735635_9748474_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CGTCGCAAGTACCGCCTGATGATGTCCGACGTCCTGGAGATTACCAACAAGTGAGTAGGAGTGGACGCCCACGCCATCCACGGATGCGGCTGTCTTGCACGCACATTAGTATCGATTTTCCCGCACTGCCACCCACACACGCACTTACTGCACTTGCGTTATGCAGCCAAGCGGGGTGGTGTGGGGTGGGCGCTTTCCATCCAAATAACTCTGTGGCAGCCAATAGCTGCCCTTTCCTCGACCACATGAT
**************************************************************************************************************.........(((.(((.(((((((.....(((.....(((((.........)))))....)))))))))))))))).*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M053
female body
 M024
male body		 M025
embryo
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
....GCAAGTACCGCCTGATGATGTCCGAC............................................................................................................................................................................................................................ 26 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0
.......AGTACCGCCTGATGATGTCCGAC............................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................CCAAGCGGGGTGGTGTGGGGT............................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................ATCGATTTTCCCGCACTG.......................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................CCAAATAACTCTGTGGCAGCC............................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...CGCAAGTACCGCCTGATGAT................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........CCGCCTGATGATGTCCGACGTCCTGGAG................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............GCCTGATGATGTCCGACGTCCTG...................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............CGCCTGATGATGTCCGAC............................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................GATGATGTCCGACGTCCTGGA.................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
................TGATGATGTCCGACGTCCTGGA.................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................GTCCGACGTCCTGGAGAT................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TCCAAATAACTCTGTGGCAGCC............................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTTCCATCCAAATAACTCTGTGGCAGC.............................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............CTGATGATGTCCGACGTC......................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................GTTATGCAGCCAAGCGGG........................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TAACTCTGTGCCAGC.............................. 15 1 7 0.71 5 0 0 0 0 0 3 1 1 0 0 0 0
............................................................................................................................................................................................................CTAACTCTGTGCCAGC.............................. 16 2 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0
............................................................................................TCTTGAACGCACATTG.............................................................................................................................................. 16 2 20 0.10 2 0 0 0 0 0 1 0 0 1 0 0 0
.................................................AGTGAGTAGTAGTGG.......................................................................................................................................................................................... 15 1 11 0.09 1 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................CCAGCTAACTCTGTGCCAGC.............................. 20 3 12 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0
.................................................ATGGAGTAGGAGTGTACGC...................................................................................................................................................................................... 19 3 16 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................ACGGATGCGGCTGTCGGGA........................................................................................................................................................ 19 3 17 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................GGCGCTGTGGGATGGGCGC......................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................................................................................................................AAGCGGGGTGGTCTGACG................................................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GCAGCGTTCATGGCGGACTACTACAGGCTGCAGGACCTCTAATGGTTGTTCACTCATCCTCACCTGCGGGTGCGGTAGGTGCCTACGCCGACAGAACGTGCGTGTAATCATAGCTAAAAGGGCGTGACGGTGGGTGTGTGCGTGAATGACGTGAACGCAATACGTCGGTTCGCCCCACCACACCCCACCCGCGAAAGGTAGGTTTATTGAGACACCGTCGGTTATCGACGGGAAAGGAGCTGGTGTACTA
***************************************************************.........(((.(((.(((((((.....(((.....(((((.........)))))....)))))))))))))))).************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body		 M023
head
 M025
embryo
 SRR618934
dsim w501 ovaries
...............GACTACTACAGGCTGCAGGACCT.................................................................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0
.......................CAGGCTGCAGGACCTCTAATGGTTGT......................................................................................................................................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0
....................CTACAGGCTGCAGGACCTCTAATGGT............................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................GTAGGTTTATTGAGACACCGTC............................... 22 0 1 1.00 1 0 0 0 1 0 0 0
....................................................................................................................................GGTGTGTGCGGGAATG...................................................................................................... 16 1 1 1.00 1 0 0 1 0 0 0 0
...............................................................................................................................................................................................CCAAATGTAGGTTTATTGA........................................ 19 2 3 1.00 3 0 0 0 1 2 0 0
...............................................................CTGCGGGTGCGGTAGGTGCCT...................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
......................ACAGGCTGCAGGACCTCTAATGGT............................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................GGGGGTGTGCGGGAATG...................................................................................................... 17 2 13 0.38 5 0 0 5 0 0 0 0
...................................................................................................................................GGGGGTGTGCGGGAATGA..................................................................................................... 18 2 4 0.25 1 0 0 1 0 0 0 0
............TCGGACTACTACAGGATGAA.......................................................................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 1 0
....................................................................................................................................GGGGTGTGCGGGAATG...................................................................................................... 16 2 20 0.15 3 0 0 3 0 0 0 0
............GCGGACTGCTACAGGATGAA.......................................................................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 0 1 0 0
....................................................................................................................................GGGGTGTGCGGGAATGA..................................................................................................... 17 2 8 0.13 1 0 0 1 0 0 0 0
...................................................................................................................................GGGGGTGTGCGGGAATGAT.................................................................................................... 19 3 12 0.08 1 0 0 1 0 0 0 0
......................................................................................................................................TGTGTGGGTGAATCACG................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:9735585-9735834 + dsi_28951 CGTCGCAAGTACCGCCTGATGATGTCCGACGTCCTGGAGATTACCAACAAGTGAGTA--GGAGTGGACG----------------------------C-----------CCACGCCATCCACGGATGCGG------------------------------CTGTCTTGCAC---GCA------CATTAGTATCGATTTT-CCCGCAC--T----------GC-------------CACCCACA--CACGCACTTACTGCACT-----------TGCGTTATGCAGCCAAGCG-G--GG---TGG-TGT--GGGGTGGGCGCTT-----------------------TC--------CAT----------------------C-----------------------CAAATAACTCTG---------TGGCAGCCAA-----------------------------------TAGCTGCCCTTTCC-------------TCGACCACATGAT
droSec2 scaffold_15:959996-960243 + dse_860 CGTCGCAAGTACCGCCTGATGATGTCCGACGTCCTGGAGATTACCAACAAGTGAGTA--GGAGTGGACG----------------------------C-----------CCACGCCATCCACGGATGCGG------------------------------CTGTCTTGCAC---GCA------CATTAGTATCGATTTT-CCCGCAC--T----------GC-------------CACCCACA--CACGCACTTACTGCACT-----------TGCGTTATGCAGCCAAGCG-G--GT---AGG-TGT--GGGGTGGGCGCTT-----------------------TC--------CAT----------------------C-----------------------CAAATAACT--G---------TGGCAGCCTA-----------------------------------TAGCTGCCCTTTCC-------------TCGACCACATGAT
dm3 chrX:10262743-10262995 + CGTCGCAAGTACCGCCTGATGATGTCCGACGTCCTGGAGATAACCAACAAGTGAGTA--GGAGTGGACG----------------------------C-----------CCACGCAATGCACGGATGCGG------------------------------CTGTCTTGCAC---GCA------CATTAGTATCGATTTT-CCCGCAC--T----------GC-------------CACCCACA--CACGCACTTACTGCACT-----------TGCGTTATGCAGCCGAACG-GG-GTAT-TGG-CGG--GTGGTGGGGGCTT-----------------------TC--------CAT----------------------C-----------------------CAAATAACTCTG---------TGGCAGCCAA-----------------------------------TAGTTGCCCTTTTC-------------TCGACCACATGAT
droEre2 scaffold_4690:4872925-4873174 - CGGCGCAAGTACCGCCTGATGATGTCCGACGTCCTGGAGATCACCAACAAGTGAGTA--GGAGTTGC---------------------G--ACA--GC-----------CCACACAATCCGCGGATGCGG------------------------------CTG--TTGCAC---GCA------CATTAGTATCGATTTT-CCCGCAC--T----------GC-------------CAC-CACC--CACGCACTTACTGCACT-----------TGCGTTATGCAGCCAAGTG-G------------------------------------------------GGG---CACTATTCCCT--------------------------AACCCCTTCTGC-------TCAAATAACTCTG---------GGGCAGCCAA-----------------------------------TAGCTGCCCTTCTC-------------GCGACCACATGAT
droYak3 X:18836558-18836848 + CGTCGCAAGTACCGCCTGATGATGTCCGACGTCCTGGAGATCACCAACAAGTGAGTA--GAAGGG-C---------------------G--AAC--GC-----------CCACTCAATTCACGGATGCGG------------------------------CTG--TTGCAC---GCA------CATTCGTATCGATTTT-CCCGCAC--T----------GCACACCCACACACGCACCCACA--CACGCACCTACTGCACT-----------TGCGTTATGCAGTCAG-GG-G--GT---TGG-TGTGGGGGGTGGGGG------------------------GTGTCACTATGCCCAAT------TCCC-----AACTCCCGAAACCCCTTTTGTTTTTGTGTCAAATAA-----------------------G-----------------------------------TAGCTGCCCTTCCA-------------TCGACCACATGAT
droEug1 scf7180000409230:51716-51984 - CGCCGCAAGTACCGCCTAATGATGTCCGACGTTCTGGAGATCACCAACAAGTGAGTAATGGTGTTGTTG----------------------------G-----------GCATACACTCCACGGATACGA------------------------------GTG--TTGCAC---GCA------TATTTCTATTGATTTT-CCCGCTA--C----------GC-------------CACCCACA--CACGCACTCACTGCACT-----------TGCGTTATGCAGT------GGG-----------------------GGGTG-------------TTATCCGCGTGCTATTACGC--AGG-------TCGCCT----TTCCC-----------------------AAATTG-----------CGGGGGCAACCTAATCCCAATTACCCTAACTCG--------AAA--TCATG------------------------TTGACTAGCCGAT
droBia1 scf7180000302126:3103791-3104039 + CGCCGCAAGTACCGCCTGATGATGTCCGACGTCCTGGAGATCACCAACAAGTGAGTC-----------------------------------------------------------------------------------------------------------------------C------CATTCCTATTGATTTT-CCCGCGA--T----------GC-------------CGCCCACG--CACGCACTCGCTGCACT-----------TGCCTGGTGCAGT------GGG-----------------------CGGTT-------------GCGTGGGCGCGCCATTACGC--AGCGAGATG-TGCCCCCCCGTTCCC-----------------------AGAAAACCCTGGAGCTGCGG----------------CTCACCCTGCCCCGCACCCCCCA-G--GCGAGCTG------CCTCGGGCCACA-----CGGCACGGGAT
droTak1 scf7180000415394:28691-28960 + CGCCGCAAATATCGCCTCATGATGTCCGATGTACTGGAGATTACCAACAAGTGAGTG--GAAATC-C---------------------A--AAA--TT-----------CCAAT-----------------------------------------------CCAAATGCAC---GCA------TATTTCTATTGATTTT-CCCGCTG--T----------TC-------------CACCCACATCCACGCACAAACTGCACTGTG--------TGCAT--TGGA-----AT-GCGTGA-GTG-T--GT----------------------------GTGTGTGGGTGCTATTACGC--AGG-------TCCCCT----TACCC-A-GCCCATT------------------A-----------C-----CAACCC-------ATTCCCCTCCCCCC--------AAAAATGGAG--ACCACTCCA------CACACAGGCAAACACTCAAT
droEle1 scf7180000491087:415178-415426 - CGCCGCAAGTACCGCCTGATGATGTCCGACGTCCTGGAGATTACCAACAAGTGAGTA--C------CC-------------------------------GA------------------------------------------------------------TG--GTACGC---GCCCAAGCGTTCGTCTATTGATTTT-CCCGCAA--T----------GC-------------CGCCCACAAACACGCACTCACTGCACT-----------TGCGTTATGCAGT------GGG-------------------TGAG---CCTC-----A-----TCTTCTGGGTGGCACTACGC--AGG-------TCTCCTCTTGCCCCT-----------------------AAAAAACCT-----CCACGT------C-T-------CTCGCCCTTACCCC------CAAAT--TCAAG------------------------TTGACCCTATGAT
droRho1 scf7180000778808:25622-25878 + CGCCGCAAGTACCGCCTGATGATGTCCGACGTCCTGGAGATCACCAACAAGTGAGTA--G------CGG----------------CAGCTGGCAGTGGGGGTGCATTTTCGAATGGACCCACAGATG--------------------------------------------------------TATATCTATTGATTTT-CCCGCGG--C----------GC-------------CACCCACA--TACGCACCCACTGCACT-----------TGCGTTATGCAGT------G--------------------GTGGG---CC-------------ACGTCTGGGTGGCACTACGC--AGG-------TCCCC-----CTCCCAAAACTCCTTATCT---------------------------------------------TTCGCCCTTCCCCG--------AAA--TCAGC------------------------TTCACTCAATGAT
droFic1 scf7180000454050:162329-162566 + CGCCGCAAGTACCGCCTGATGATGTCCGACGTCCTGGAGATCACCAACAAGTGAGTA--GGA---------------------------------------------------------------TGC-----------------------------------------ATTCGGCAG-----GATGCCTATTGATTTTACCCGCAGTCT----------GC-------------CGCCCACACACACGCACCCACTGCACT-----------TGCGTTATGCAGTTGAT-GGG-------------------GTGGC---ACTCTGGCAATCTGGCAATCTGGGTGGCGTTACGC--AGC-------CCC-----CACTCCCAAAACCGATTCGGT---------------------------------------------TCTGCCCTTCCCCG----------------------------------------------CAAAACGAT
droKik1 scf7180000302698:903531-903734 - CGCCGGAAGTATCGCCTAATGATGTCCGATGTGCTGGAGATCACCAACAAGTGAGTG--TTTCTT-T-TGGATTTTTATAAAGAGGAGGTGGCTTCGCTGA------------------------------------------------------------TG--ATGCAC---GCAC-----CATATCTATTGATTTT-CTCTCAG--C----------GC-------------CGCCCACACACACGCACTCAGTGCCCACTGCACTCAATTGCCATGTGCTGCT--------------G-GCTGT--GGGGAGGAGGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13335:2473144-2473224 - AGGAGCAAGTACCGCCTGATGATGTCCGATGTCCTGGAGATTACCAACAAGTGAGTG--G------CTG----------------------------C-----------CCAAG-GACCCAAGGATGCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396683:102790-102973 + CGTCGCAAGTATCGCCTCATGATGTCCGATGTCCTGGAGATTACCAACAAGTGAGTG--C------CTGCCACAAAAAAAAAAAGGACG--------------------------------TGGATGCGTGTGGATGCAGTGGCGTGTGTGTGGGCGGTATTGTCGTGGG---------------TGCTTATTGATTTT-CGCTCTG--CGGCAAGTGCAGC-------------CACCCACA--CAGGCAC--ACTGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XL_group1a:6899893-6899955 - CGACGCAAGTATCGCCTCATGATGTCCGATGTCCTGGAAATTACCAACAAGTGAGTG--TGTGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_25:390144-390199 + CGACGCAAGTATCGCCTCATGATGTCCGATGTCCTGGAAATTACCAACAAGTGAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004401:1100634-1100690 + AGACGCAAGTATCGCCTCATGATGTCTGATGTTCTGGAAATAACAAATAAGTGAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12932:74926-74982 + CGTAACAAGTATCGCCTAATGATATCCGATGTCCTGGAAATAACCAACAAGTGAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6473:2224389-2224444 - CGCAACAAATATCGCCTAATGATATCCGATGTCCTCGAAATAACCAACAAGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15203:7471484-7471540 - CGATACAAGTATCGGCTCATGATATCCGATGTCCTCGAAATAACCAACAAGTGAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGTCGCAAGTACCGCCTGATGATGTCCGACGTCCTGGAGATTACCAACAAGTGAGTA--GGAGTGGACG----------------------------C-----------CCACGCCATCCACGGATGCGG------------------------------CTGTCTTGCAC---GCA------CATTAGTATCGATTTT-CCCGCAC--T----------GC-------------CACCCACA--CACGCACTTACTGCACT-----------TGCGTTATGCAGCCAAGCG-G--GG---TGG-TGT--GGGGTGGGCGCTT-----------------------TC--------CAT----------------------C-----------------------CAAATAACTCTG---------TGGCAGCCAA-----------------------------------TAGCTGCCCTTTCC-------------TCGACCACATGATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....GCAAGTACCGCCTGATGATGTCCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00201010000000000000
.......AGTACCGCCTGATGATGTCCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
.............................................................................................................................................................................................................................................................................................CCAAGCG-G--GG---TGG-TGT--GGGGT....................................................................................................................................................................................................2111.00100000000000001000
..............................................................................................................................................................................................ATCGATTTT-CCCGCAC--T----------G..................................................................................................................................................................................................................................................................................................1811.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................C-----------------------CAAATAACTCTG---------TGGCAGCC.............................................................................2111.00110000000000000000
...CGCAAGTACCGCCTGATGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...........CCGCCTGATGATGTCCGACGTCCTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
.............GCCTGATGATGTCCGACGTCCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
............CGCCTGATGATGTCCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
.................GATGATGTCCGACGTCCTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
................TGATGATGTCCGACGTCCTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.......................GTCCGACGTCCTGGAGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................................................T----------------------C-----------------------CAAATAACTCTG---------TGGCAGCC.............................................................................2211.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................TT-----------------------TC--------CAT----------------------C-----------------------CAAATAACTCTG---------TGGCAGC..............................................................................2711.00100010000000000000
...............CTGATGATGTCCGACGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
....................................................................................................................................................................................................................................................................................GTTATGCAGCCAAGCG-G--G......................................................................................................................................................................................................................1811.00100010000000000000
droSec2
CGTCGCAAGTACCGCCTGATGATGTCCGACGTCCTGGAGATTACCAACAAGTGAGTA--GGAGTGGACG----------------------------C-----------CCACGCCATCCACGGATGCGG------------------------------CTGTCTTGCAC---GCA------CATTAGTATCGATTTT-CCCGCAC--T----------GC-------------CACCCACA--CACGCACTTACTGCACT-----------TGCGTTATGCAGCCAAGCG-G--GT---AGG-TGT--GGGGTGGGCGCTT-----------------------TC--------CAT----------------------C-----------------------CAAATAACT--G---------TGGCAGCCTA-----------------------------------TAGCTGCCCTTTCC-------------TCGACCACATGATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................GCG-G--GT---AGG-TGT--GGGGTGGGC................................................................................................................................................................................................2117.0070106
..................................................................................................................................................................................................................................................................................................CG-G--GT---AGG-TGT--GGGGTGGGC................................................................................................................................................................................................2015.0050005
...CGCAAGTACCGCCTGATGATGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
........GTACCGCCTGATGATGTCCGACGTCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
................TGATGATGTCCGACGTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
.....................................................................................................................................................................................................................................................................................................G--GT---AGG-TGT--GGGGTGGGC................................................................................................................................................................................................1811.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCTGCCCTTTCC-------------TCGACCA......2111.0011000
...CGCAAGTACCGCCTGATGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.............GCCTGATGATGTCCGACGTCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
.................................................................................................................................................................................................................................................................................................GCG-G--GT---AGG-TGT--GGGGTGGGCT...............................................................................................................................................................................................2211.0010001
.............GCCTGATGATGTCCGACGTCCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
...................................................................................................................CATCCACGGATGCGG------------------------------CTGTCTTGCAC---.................................................................................................................................................................................................................................................................................................................................................2611.0010010
.........TACCGCCTGATGATGTCCGACGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
...............CTGATGATGTCCGACGTCCTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
.................GATGATGTCCGACGTCCTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
dm3
CGTCGCAAGTACCGCCTGATGATGTCCGACGTCCTGGAGATAACCAACAAGTGAGTA--GGAGTGGACG----------------------------C-----------CCACGCAATGCACGGATGCGG------------------------------CTGTCTTGCAC---GCA------CATTAGTATCGATTTT-CCCGCAC--T----------GC-------------CACCCACA--CACGCACTTACTGCACT-----------TGCGTTATGCAGCCGAACG-GG-GTAT-TGG-CGG--GTGGTGGGGGCTT-----------------------TC--------CAT----------------------C-----------------------CAAATAACTCTG---------TGGCAGCCAA-----------------------------------TAGTTGCCCTTTTC-------------TCGACCACATGATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................GATGTCCGACGTCCTGGAGATAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TATGCAGCCGAACG-GG-GTAT-TGG-C.............................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
...CGCAAGTACCGCCTGATGATGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCCTGATGATGTCCGACGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GACGTCCTGGAGATAACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TGATGATGTCCGACGTCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
..............CCTGATGATGTCCGACGTCCTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................GATGATGTCCGACGTCCTGGAGATAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CGTCCTGGAGATAACCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TACCGCCTGATGATGTCCGACGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCCTGATGATGTCCGACGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...............................TCCTGGAGATAACCAACAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................CG-GG-GTAT-TGG-CGG--GTGGTGGGGGG..............................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
..........ACCGCCTGATGATGTCCGACGTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTA--GGAGTGGACG----------------------------C-----------CCACG.............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................ATGATGTCCGACGTCCTGGAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGTCCGACGTCCTGGAGATAACCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CAACAAGTGAGTA--GGAGTGGACG----------------------------C-----------C.................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................GATGATGTCCGACGTCCTGGAGATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGTCCGACGTCCTGGAGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGATGTCCGACGTCCTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...CGCAAGTACCGCCTGATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GATGTCCGACGTCCTGGAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GATGATGTCCGACGTCCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...CGCAAGTACCGCCTGATGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TACCGCCTGATGATGTCCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGATGTCCGACGTCCTGGAGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ACCGCCTGATGATGTCCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TGCACGGATGCGG------------------------------CTGTCTTG.......................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................TAACCAACAAGTGAGTA--GGAGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................................CGCAC--T----------GC-------------CACCCACA--CA........................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GTACCGCCTGATGATGTCCGACGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CCGCCTGATGATGTCCGACGTCCTGGAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AAGTACCGCCTGATGATGTCCGACGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CCTGATGATGTCCGACGTCCTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GTACCGCCTGATGATGTCCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ATAACCAACAAGTGAGTA--GGAGTGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TCGCAAGTACCGCCTGATGATGTCCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................AAGTGAGTA--GGAGTGGACG----------------------------C-----------..................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............CTGATGATGTCCGACGTCCTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GCAAGTACCGCCTGATGATGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................ATGATGTCCGACGTCCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
...CGCAAGTACCGCCTGATGATGTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AACAAGTGAGTA--GGAGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
.................GATGATGTCCGACGTCCTGGAGATAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TCTG---------TGGCAGCCAA-----------------------------------TAGT....................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGTCCGACGTCCTGGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................GG------------------------------CTGTCTTGCAC---GCA------GTG.....................................................................................................................................................................................................................................................................................................................................19100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CGGCGCAAGTACCGCCTGATGATGTCCGACGTCCTGGAGATCACCAACAAGTGAGTA--GGAGTTGC---------------------G--ACA--GC-----------CCACACAATCCGCGGATGCGG------------------------------CTG--TTGCAC---GCA------CATTAGTATCGATTTT-CCCGCAC--T----------GC-------------CAC-CACC--CACGCACTTACTGCACT-----------TGCGTTATGCAGCCAAGTG-G------------------------------------------------GGG---CACTATTCCCT--------------------------AACCCCTTCTGC-------TCAAATAACTCTG---------GGGCAGCCAA-----------------------------------TAGCTGCCCTTCTC-------------GCGACCACATGATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................GACGTCCTGGAGATCACCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
..............CCTGATGATGTCCGACGTCCTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
.............GCCTGATGATGTCCGACGTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
............CGCCTGATGATGTCCGACGTCCTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
....GCAAGTACCGCCTGATGATGTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.....CAAGTACCGCCTGATGATGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
..................................................................................................................................................................G--TTGCAC---GCA------CATTAGTATC..............................................................................................................................................................................................................................................................................................................................2011.0010100000
.....................ATGTCCGACGTCCTGGAGATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.................................................................................................................ACAATCCGCGGATGCGG------------------------------CTG--T.........................................................................................................................................................................................................................................................................................................................................................2111.0010000100
droYak3
CGTCGCAAGTACCGCCTGATGATGTCCGACGTCCTGGAGATCACCAACAAGTGAGTA--GAAGGG-C---------------------G--AAC--GC-----------CCACTCAATTCACGGATGCGG------------------------------CTG--TTGCAC---GCA------CATTCGTATCGATTTT-CCCGCAC--T----------GCACACCCACACACGCACCCACA--CACGCACCTACTGCACT-----------TGCGTTATGCAGTCAG-GG-G--GT---TGG-TGTGGGGGGTGGGGG------------------------GTGTCACTATGCCCAAT------TCCC-----AACTCCCGAAACCCCTTTTGTTTTTGTGTCAAATAA-----------------------G-----------------------------------TAGCTGCCCTTCCA-------------TCGACCACATGATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........ACCGCCTGATGATGTCCGACGTCCTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2913.00300000000003
.....CAAGTACCGCCTGATGATGTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00202000000000
...CGCAAGTACCGCCTGATGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00201000010000
........GTACCGCCTGATGATGTCCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00210000010000
.........TACCGCCTGATGATGTCCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000
............CGCCTGATGATGTCCGACGTCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
..........ACCGCCTGATGATGTCCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
................TGATGATGTCCGACGTCCTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.......................GTCCGACGTCCTGGAGATCACCAACAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
........GTACCGCCTGATGATGTCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
....GCAAGTACCGCCTGATGATGTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
....................GATGTCCGACGTCCTGGAGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
....................GATGTCCGACGTCCTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
...CGCAAGTACCGCCTGATGATGTCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
........GTACCGCCTGATGATGTCCGACGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
droEug1
CGCCGCAAGTACCGCCTAATGATGTCCGACGTTCTGGAGATCACCAACAAGTGAGTAATGGTGTTGTTG----------------------------G-----------GCATACACTCCACGGATACGA------------------------------GTG--TTGCAC---GCA------TATTTCTATTGATTTT-CCCGCTA--C----------GC-------------CACCCACA--CACGCACTCACTGCACT-----------TGCGTTATGCAGT------GGG-----------------------GGGTG-------------TTATCCGCGTGCTATTACGC--AGG-------TCGCCT----TTCCC-----------------------AAATTG-----------CGGGGGCAACCTAATCCCAATTACCCTAACTCG--------AAA--TCATG------------------------TTGACTAGCCGATSizeHit CountTotal NormTotal
No Reads
droBia1
CGCCGCAAGTACCGCCTGATGATGTCCGACGTCCTGGAGATCACCAACAAGTGAGTC-----------------------------------------------------------------------------------------------------------------------C------CATTCCTATTGATTTT-CCCGCGA--T----------GC-------------CGCCCACG--CACGCACTCGCTGCACT-----------TGCCTGGTGCAGT------GGG-----------------------CGGTT-------------GCGTGGGCGCGCCATTACGC--AGCGAGATG-TGCCCCCCCGTTCCC-----------------------AGAAAACCCTGGAGCTGCGG----------------CTCACCCTGCCCCGCACCCCCCA-G--GCGAGCTG------CCTCGGGCCACA-----CGGCACGGGATSizeHit CountTotal NormTotal
No Reads
droTak1
CGCCGCAAATATCGCCTCATGATGTCCGATGTACTGGAGATTACCAACAAGTGAGTG--GAAATC-C---------------------A--AAA--TT-----------CCAAT-----------------------------------------------CCAAATGCAC---GCA------TATTTCTATTGATTTT-CCCGCTG--T----------TC-------------CACCCACATCCACGCACAAACTGCACTGTG--------TGCAT--TGGA-----AT-GCGTGA-GTG-T--GT----------------------------GTGTGTGGGTGCTATTACGC--AGG-------TCCCCT----TACCC-A-GCCCATT------------------A-----------C-----CAACCC-------ATTCCCCTCCCCCC--------AAAAATGGAG--ACCACTCCA------CACACAGGCAAACACTCAATSizeHit CountTotal NormTotal
No Reads
droEle1
CGCCGCAAGTACCGCCTGATGATGTCCGACGTCCTGGAGATTACCAACAAGTGAGTA--C------CC-------------------------------GA------------------------------------------------------------TG--GTACGC---GCCCAAGCGTTCGTCTATTGATTTT-CCCGCAA--T----------GC-------------CGCCCACAAACACGCACTCACTGCACT-----------TGCGTTATGCAGT------GGG-------------------TGAG---CCTC-----A-----TCTTCTGGGTGGCACTACGC--AGG-------TCTCCTCTTGCCCCT-----------------------AAAAAACCT-----CCACGT------C-T-------CTCGCCCTTACCCC------CAAAT--TCAAG------------------------TTGACCCTATGATSizeHit CountTotal NormTotal
No Reads
droRho1
CGCCGCAAGTACCGCCTGATGATGTCCGACGTCCTGGAGATCACCAACAAGTGAGTA--G------CGG----------------CAGCTGGCAGTGGGGGTGCATTTTCGAATGGACCCACAGATG--------------------------------------------------------TATATCTATTGATTTT-CCCGCGG--C----------GC-------------CACCCACA--TACGCACCCACTGCACT-----------TGCGTTATGCAGT------G--------------------GTGGG---CC-------------ACGTCTGGGTGGCACTACGC--AGG-------TCCCC-----CTCCCAAAACTCCTTATCT---------------------------------------------TTCGCCCTTCCCCG--------AAA--TCAGC------------------------TTCACTCAATGATSizeHit CountTotal NormTotal
No Reads
droFic1
CGCCGCAAGTACCGCCTGATGATGTCCGACGTCCTGGAGATCACCAACAAGTGAGTA--GGA---------------------------------------------------------------TGC-----------------------------------------ATTCGGCAG-----GATGCCTATTGATTTTACCCGCAGTCT----------GC-------------CGCCCACACACACGCACCCACTGCACT-----------TGCGTTATGCAGTTGAT-GGG-------------------GTGGC---ACTCTGGCAATCTGGCAATCTGGGTGGCGTTACGC--AGC-------CCC-----CACTCCCAAAACCGATTCGGT---------------------------------------------TCTGCCCTTCCCCG----------------------------------------------CAAAACGATSizeHit CountTotal NormTotal
No Reads
droKik1
CGCCGGAAGTATCGCCTAATGATGTCCGATGTGCTGGAGATCACCAACAAGTGAGTG--TTTCTT-T-TGGATTTTTATAAAGAGGAGGTGGCTTCGCTGA------------------------------------------------------------TG--ATGCAC---GCAC-----CATATCTATTGATTTT-CTCTCAG--C----------GC-------------CGCCCACACACACGCACTCAGTGCCCACTGCACTCAATTGCCATGTGCTGCT--------------G-GCTGT--GGGGAGGAGGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
AGGAGCAAGTACCGCCTGATGATGTCCGATGTCCTGGAGATTACCAACAAGTGAGTG--G------CTG----------------------------C-----------CCAAG-GACCCAAGGATGCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............CGCCTGATGATGTCCGATGTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
........GTACCGCCTGATGATGTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
........GTACCGCCTGATGATGTCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
....................GATGTCCGATGTCCTGGAGATTACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.....................ATGTCCGATGTCCTGGAGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100
...............CTGATGATGTCCGATGTCCTGGAGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
droBip1
CGTCGCAAGTATCGCCTCATGATGTCCGATGTCCTGGAGATTACCAACAAGTGAGTG--C------CTGCCACAAAAAAAAAAAGGACG--------------------------------TGGATGCGTGTGGATGCAGTGGCGTGTGTGTGGGCGGTATTGTCGTGGG---------------TGCTTATTGATTTT-CGCTCTG--CGGCAAGTGCAGC-------------CACCCACA--CAGGCAC--ACTGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
CGACGCAAGTATCGCCTCATGATGTCCGATGTCCTGGAAATTACCAACAAGTGAGTG--TGTGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.GACGCAAGTATCGCCTCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020200000000
...............CTCATGATGTCCGATGTCCTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020200000000
....................GATGTCCGATGTCCTGGAAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000000
......AAGTATCGCCTCATGATGTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.............GCCTCATGATGTCCGATGTCCTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.....................ATGTCCGATGTCCTGGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...................TGATGTCCGATGTCCTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
CGACGCAAGTATCGCCTCATGATGTCCGATGTCCTGGAAATTACCAACAAGTGAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
CGACGCAAGTATCGCCTCATGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.................CATGATGTCCGATGTCCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..........................CGATGTCCTGGAAATTACCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
....................GATGTCCGATGTCCTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
..................ATGATGTCCGATGTCCTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
................TCATGATGTCCGATGTCCTGGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
........GTATCGCCTCATGATGTCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
droWil2
AGACGCAAGTATCGCCTCATGATGTCTGATGTTCTGGAAATAACAAATAAGTGAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................GTCTGATGTTCTGGAAATAACAAATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
..................ATGATGTCTGATGTTCTGGAAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
...CGCAAGTATCGCCTCATGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.........................CTGATGTTCTGGAAATAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...................TGATGTCTGATGTTCTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...................TGATGTCTGATGTTCTGGAAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..........................TGATGTTCTGGAAATAACAAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001
...CGCAAGTATCGCCTCATGATGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.................CATGATGTCTGATGTTCTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
....................GATGTCTGATGTTCTGGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
....................GATGTCTGATGTTCTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
............CGCCTCATGATGTCTGATGTTCTGGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
.................CATGATGTCTGATGTTCTGGAAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
droVir3
CGTAACAAGTATCGCCTAATGATATCCGATGTCCTGGAAATAACCAACAAGTGAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........TCGCCTAATGATATCCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
..............................GTCCTGGAAATAACCAACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
............CGCCTAATGATATCCGATGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
....................GATATCCGATGTCCTGGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
............CGCCTAATGATATCCGATGTCCTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000001000000000000000000000000000000000000000000000000
...................TGATATCCGATGTCCTGGAAATAACCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
CGCAACAAATATCGCCTAATGATATCCGATGTCCTCGAAATAACCAACAAGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................ATATCCGATGTCCTCGAAATAACCAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.............GCCTAATGATATCCGATGTCCTCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
............CGCCTAATGATATCCGATGTCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
droGri2
CGATACAAGTATCGGCTCATGATATCCGATGTCCTCGAAATAACCAACAAGTGAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................ATATCCGATGTCCTCGAAATAACCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110

Generated: 05/18/2015 at 09:44 AM