ID:dsi_28936 |
Coordinate:3l:7377029-7377178 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
CDS [3l_7377179_7378187_+]; exon [3l_7377179_7378187_+]; intron [3l_7372799_7377178_+]
No Repeatable elements found
| --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## GTATACTTCCCCTTAGATTAAATTTAGTACAAAACAATCCTTTGATTAGGAATGGATTGCCACACTTTTTGGAGTTCACTTTTTTGCTGAAATGTATCCGAATAATTCTACTGGCTTTTTGGCCGTGTGTCCAATATACGGCTCCCTCCGTCTAATAATACGAAATTGTAATGGATTTGTTTTGTTGCCGCTATTTATAGATCGCTGCCCGAGGTGCCGTTCCGCGGGTTATCGAATGTCACCTACCTAA **************************************************.(((((..((((.....((((((...((.(((......))).))..)))))).........)))).....((((((((((...))))))))))...))))).((((((.((.(((((......))))))).)))))).............************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
GSM343915 embryo |
M023 head |
SRR618934 dsim w501 ovaries |
SRR553486 Makindu_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................TCCTTTGATTAGGAA...................................................................................................................................................................................................... | 15 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................................................................................................................GTTCCGCGGGTTATCGAATGTCAC........ | 24 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................................................................................................GCTCCCTTCGTCTAGT.............................................................................................. | 16 | 2 | 20 | 0.30 | 6 | 0 | 0 | 0 | 0 | 3 | 2 | 1 |
| ................................................................................................................................................CCTCCGTCTCATTATACGCA...................................................................................... | 20 | 3 | 4 | 0.25 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................................................ATTATAGGAAATTGTAATGGC........................................................................... | 21 | 3 | 9 | 0.11 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................................................................................................................................................................GCCGAGGAGCCGTACCGCG........................ | 19 | 3 | 18 | 0.06 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
|
CATATGAAGGGGAATCTAATTTAAATCATGTTTTGTTAGGAAACTAATCCTTACCTAACGGTGTGAAAAACCTCAAGTGAAAAAACGACTTTACATAGGCTTATTAAGATGACCGAAAAACCGGCACACAGGTTATATGCCGAGGGAGGCAGATTATTATGCTTTAACATTACCTAAACAAAACAACGGCGATAAATATCTAGCGACGGGCTCCACGGCAAGGCGCCCAATAGCTTACAGTGGATGGATT
**************************************************.(((((..((((.....((((((...((.(((......))).))..)))))).........)))).....((((((((((...))))))))))...))))).((((((.((.(((((......))))))).)))))).............************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM343915 embryo |
SRR553487 NRT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|
| ...........................ATGTTTTGTTAGGGAACT............................................................................................................................................................................................................. | 18 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................AGGAAACTAGTTCTTACCT.................................................................................................................................................................................................. | 19 | 2 | 2 | 0.50 | 1 | 0 | 1 | 0 |
| ....................................................................................ACCACTGTACATAGGCT..................................................................................................................................................... | 17 | 2 | 7 | 0.14 | 1 | 0 | 1 | 0 |
| .......................................................................................................................................................................................................................CGGAATGGCGCCCAATTG................. | 18 | 3 | 13 | 0.08 | 1 | 0 | 0 | 1 |
| ..........................................................................................................................................TCCGAGGGAGGTAGATTC.............................................................................................. | 18 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 |
Generated: 04/24/2015 at 06:43 AM