ID:dsi_28935 |
Coordinate:3l:8146378-8146436 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3l_8146190_8146377_+]; CDS [3l_8146190_8146377_+]; CDS [3l_8146437_8147533_+]; exon [3l_8146437_8147533_+]; intron [3l_8146378_8146436_+]
No Repeatable elements found
| ##################################################-----------------------------------------------------------################################################## GTGCCATGTGTTTCGGTGCCATATTCCCGAAGCGGTTAATCAAGTCAGCGGTGAGTCAGATCATACAGTGATTTCATCCCCCCGATTTATTCAAAATCTTCGCCCGCAGCCTGCTTCCAGAAGGCATTCCAGACTTATCCGCCCAGCATGAGTTGCAGC **************************************************((((((((((((((...))))))).........)))))))...................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
M053 female body |
GSM343915 embryo |
SRR553487 NRT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| ....................ATATTCCCGAACCGG............................................................................................................................ | 15 | 1 | 2 | 2.50 | 5 | 4 | 0 | 0 | 1 | 0 |
| ................................................................................................................GCTTCCAGAAGGCATTCC............................. | 18 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...............................GCGGTTACTCAAGTCAGAGGT........................................................................................................... | 21 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...................................................................................................................................GACTTATCCGCCCAGCATGA........ | 20 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| ....................ATATTCCCGAACCGGG........................................................................................................................... | 16 | 2 | 20 | 0.30 | 6 | 6 | 0 | 0 | 0 | 0 |
| ........................................................................................GTTACAAATCTTCGCCCGCA................................................... | 20 | 3 | 11 | 0.09 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..........TTTGGGTGCGAGATTCCCG.................................................................................................................................. | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
| .................GCCATAGTCCCCAAGCAGT........................................................................................................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
|
CACGGTACACAAAGCCACGGTATAAGGGCTTCGCCAATTAGTTCAGTCGCCACTCAGTCTAGTATGTCACTAAAGTAGGGGGGCTAAATAAGTTTTAGAAGCGGGCGTCGGACGAAGGTCTTCCGTAAGGTCTGAATAGGCGGGTCGTACTCAACGTCG
**************************************************((((((((((((((...))))))).........)))))))...................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| ................ACGGTATGAGGGATTCG.............................................................................................................................. | 17 | 2 | 6 | 0.33 | 2 | 2 | 0 | 0 | 0 | 0 |
| ...............................................................................GGGGCTACATATGTTTTA.............................................................. | 18 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 | 0 |
| ................................................................................................................................GGTCTGACTAGGTGGGGCGT........... | 20 | 3 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...................................................................................................................AGGTGTTCCGTAGGGTCTTA........................ | 20 | 3 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 |
| ................................................................................................................................GGTCTGACGAGGTGGGTCGT........... | 20 | 3 | 11 | 0.09 | 1 | 0 | 0 | 1 | 0 | 0 |
| .............ACCACGGTTAAAGGGCTTCG.............................................................................................................................. | 20 | 3 | 14 | 0.07 | 1 | 0 | 0 | 0 | 1 | 0 |
| ...........................................................................................................................CGTAAGGTCTGTATAGT................... | 17 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
Generated: 04/24/2015 at 10:43 AM