ID:

dsi_28858

 Coordinate:

3l:17872735-17872884 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.4 -17.1 -17.1

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
PROTOP_BDNAP-
PROTOP_BDNAP-
mature
  1. 2l:11194300-11194315 -
  2. 2l:21434352-21434367 +
  3. dsi_28858  3l:17872829-17872844 -
  4. 3r:12650860-12650875 -
  5. node_54236:510-525 +
  6. node_74203:71-86 +
  7. node_38116:1057-1072 -
  8. node_54231:387-402 +
star

Sense Strand Reads

GTGAAACAAATACCAGAAGTAGCAACATTGCCGAGATTCCACAAAATAATGTATGTTCAAGTATATACATATTACCAAAGACACTAGAATAACAAGATGCGTAACTTTATACGATTTTTGTTCACAAATTTGACAAATTAAGCCCTTTACCTTATAAGTTCTTGGACTTTAAATCTATTTTATTTGTTATAAATTAAAATAGTTTTCCAATCATTTGTTTTACATTTTTTAACATTGTTTAACGTTAAGG
**************************************************((((((......))))))...........((((.(((((((((((((..((((......))))..))))))......((((((....(((((..(((........)))..)))))...)))))).)))))))..))))............************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 GSM343915
embryo
..........................................................................................AACAAGATGCGTAACT................................................................................................................................................ 16 0 8 14.00 112 112 0 0 0 0 0 0 0 0
......................................................................................GAATAACAAGATGCGTAACT................................................................................................................................................ 20 0 6 7.00 42 2 40 0 0 0 0 0 0 0
..........................................................................................AACAAGATGCGTAACTTTATACGATT...................................................................................................................................... 26 0 1 5.00 5 5 0 0 0 0 0 0 0 0
.........................................................................................TAACAAGATGCGTAACT................................................................................................................................................ 17 0 8 2.25 18 18 0 0 0 0 0 0 0 0
.........................................................................................TAACAAGATGCGTAACTTTATACGA........................................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.............................................................................................AAGATGCGTAACTTTATACGATT...................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................AACAAGATGCGTAACTTTATACGAT....................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........TACCAGAAGTAGCAACATTGCCGAGATT.................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0
..........TACCAGAAGTAGCAACATTGCCGAGA...................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................TTAAGCCAGTTACCTTCTAAGT........................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0
...........ACCAGAAGTAGCAACATTGCCGAGA...................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................TAACAAGATGCGTAACTT............................................................................................................................................... 18 0 2 0.50 1 0 1 0 0 0 0 0 0 0
....................................................................ATATTACCAAAGACACTAGAATAACAA........................................................................................................................................................... 27 0 2 0.50 1 0 0 0 1 0 0 0 0 0
....................................................................ATATTACCAAAGACACTAGA.................................................................................................................................................................. 20 0 2 0.50 1 0 0 0 1 0 0 0 0 0
....................................................................ATATTACCAAAGACACTAGAATT............................................................................................................................................................... 23 1 4 0.50 2 0 0 0 0 2 0 0 0 0
......................................................................................GAATAACAAGATGCGTAACTT............................................................................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0 0
....................................................................ATATTACCAAAGACACTAGAATAACA............................................................................................................................................................ 26 0 2 0.50 1 0 0 0 1 0 0 0 0 0
.....................................................................TATTACCAAAGACACTAGAA................................................................................................................................................................. 20 0 7 0.43 3 0 0 1 1 0 0 1 0 0
......................................................................................GAATAACAAGATGCGTAACTTCATACGA........................................................................................................................................ 28 1 4 0.25 1 0 0 0 1 0 0 0 0 0
.........................................................................................TAACAAGATGCGTAACTTCATACGA........................................................................................................................................ 25 1 4 0.25 1 0 0 0 1 0 0 0 0 0
.........................................................................................TAATAAGATGCGTAACTTCATACGA........................................................................................................................................ 25 2 4 0.25 1 0 0 0 0 0 0 1 0 0
..........................................................................................AACAAGATGCGTAACTCTATACGAT....................................................................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0
......................................................................................GAATAACAAGATGCGTAACATT.............................................................................................................................................. 22 1 5 0.20 1 1 0 0 0 0 0 0 0 0
........................................................................TACCAAAGACACTAGAATAACAAGAT........................................................................................................................................................ 26 0 20 0.20 4 0 0 2 0 2 0 0 0 0
.....................................................................TATTACCAAAGACACTAGAATAACA............................................................................................................................................................ 25 0 5 0.20 1 0 0 0 0 0 0 0 1 0
..........................................................................................AACAAGATGCGTCACTTCATACGA........................................................................................................................................ 24 2 5 0.20 1 0 0 0 0 1 0 0 0 0
.......................................................................TTACCAAAGACACTAGAATAACAAGA......................................................................................................................................................... 26 0 20 0.10 2 0 0 0 1 0 0 1 0 0
.............................................................................................................................................................................TCTATTTCAGTTGTTATA........................................................... 18 2 20 0.10 2 0 0 0 0 2 0 0 0 0
........................................................................TACCAAAGACACTAGAA................................................................................................................................................................. 17 0 20 0.10 2 0 0 0 0 0 0 2 0 0
.....................................................................TATTACCAAAGACACTAGAATAAAAAT.......................................................................................................................................................... 27 2 10 0.10 1 0 0 0 0 0 0 1 0 0
.........................................................................ACCAAAGACACTAGA.................................................................................................................................................................. 15 0 20 0.10 2 0 0 0 0 2 0 0 0 0
......................................................................................GAATAACAAGATGCGTA................................................................................................................................................... 17 0 20 0.10 2 0 0 0 2 0 0 0 0 0
..........................................................................................AACTAGATGCGTAACT................................................................................................................................................ 16 1 12 0.08 1 1 0 0 0 0 0 0 0 0
..........................................................................................AACAAGATGCGTAACTTCATACGTT....................................................................................................................................... 25 2 12 0.08 1 1 0 0 0 0 0 0 0 0
.....................................................................TATTACCAAAGACACTAGAACACTA............................................................................................................................................................ 25 3 14 0.07 1 0 0 0 1 0 0 0 0 0
..........................................................................................AACAGGATGCGTAACT................................................................................................................................................ 16 1 16 0.06 1 1 0 0 0 0 0 0 0 0
..........................................................................................AACAAGATGCGTAACCT............................................................................................................................................... 17 1 19 0.05 1 1 0 0 0 0 0 0 0 0
..................................................................................................GCGTAACTTTATAGGAA....................................................................................................................................... 17 2 20 0.05 1 0 0 1 0 0 0 0 0 0
............................................................................AAAGACACTAGAATAACAAGAT........................................................................................................................................................ 22 0 20 0.05 1 0 0 1 0 0 0 0 0 0
........................................................................TACCAAAGACACTAGA.................................................................................................................................................................. 16 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................GACACTAGAATAACAAGATGCGT.................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................TACCAAAGACACTAGAATAACAAGA......................................................................................................................................................... 25 0 20 0.05 1 0 0 1 0 0 0 0 0 0
.........................................................................ACCAAAGACACTAGAATAACAAGA......................................................................................................................................................... 24 0 20 0.05 1 0 0 0 0 0 0 0 0 1
............................................................................AAAGACACTAGAATAATAAGAT........................................................................................................................................................ 22 1 20 0.05 1 0 0 0 0 0 1 0 0 0
.........................................................................ACCAAAGACACTAGAATAACAAGATGCG..................................................................................................................................................... 28 0 20 0.05 1 0 0 1 0 0 0 0 0 0
.......................................................................TTACCAAAGACACTAGAATAACAAGATG....................................................................................................................................................... 28 0 20 0.05 1 0 0 0 0 1 0 0 0 0
..........................................................................CCAAAGACACTAGAATAACAAGATGCG..................................................................................................................................................... 27 0 20 0.05 1 0 0 0 0 1 0 0 0 0
................................................................................ACACTAGAATAACAAGATGCG..................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.............................................................................................AAGATGCGTAACTTC.............................................................................................................................................. 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................TTACCAAAGACACTAGAATAACAAGATGC...................................................................................................................................................... 29 0 20 0.05 1 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

CACTTTGTTTATGGTCTTCATCGTTGTAACGGCTCTAAGGTGTTTTATTACATACAAGTTCATATATGTATAATGGTTTCTGTGATCTTATTGTTCTACGCATTGAAATATGCTAAAAACAAGTGTTTAAACTGTTTAATTCGGGAAATGGAATATTCAAGAACCTGAAATTTAGATAAAATAAACAATATTTAATTTTATCAAAAGGTTAGTAAACAAAATGTAAAAAATTGTAACAAATTGCAATTCC
**************************************************((((((......))))))...........((((.(((((((((((((..((((......))))..))))))......((((((....(((((..(((........)))..)))))...)))))).)))))))..))))............************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 O002
Head
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 O001
Testis
 SRR553488
RT_0-2 hours eggs
 M053
female body
 M025
embryo
 M024
male body
............................................................................TTTCTGTGATCTTATTGTTCTAC....................................................................................................................................................... 23 0 20 13.25 265 0 0 265 0 0 0 0 0 0 0 0 0
.......................................................................AATGGTTTCTGTGATCTTATTGTTC.......................................................................................................................................................... 25 0 20 8.15 163 24 47 0 31 6 1 40 0 13 1 0 0
.........................................................................TGGTTTCTGTGATCTTATTGTTCTAC....................................................................................................................................................... 26 0 20 7.80 156 156 0 0 0 0 0 0 0 0 0 0 0
..........................................................................GGTTTCTGTGATCTTATTGTTC.......................................................................................................................................................... 22 0 20 5.55 111 0 0 0 35 0 70 6 0 0 0 0 0
........................................................................ATGGTTTCTGTGATCTTATTGTTC.......................................................................................................................................................... 24 0 20 5.20 104 16 0 0 67 0 16 0 0 0 5 0 0
........................................................................ATGGTTTCTGTGATCTTATTGTTCTAC....................................................................................................................................................... 27 0 20 4.85 97 41 51 0 0 3 0 0 0 0 1 0 1
..........................................................................GGTTTCTGTGATCTTATTGTTCTAC....................................................................................................................................................... 25 0 20 3.90 78 0 78 0 0 0 0 0 0 0 0 0 0
.............................................................................................................ATGCTAAAAACAAGTGTTTAAACTGTTT................................................................................................................. 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.....................CGTTGTAACGGCTCTAAGGTGTT.............................................................................................................................................................................................................. 23 0 1 2.00 2 0 0 0 1 1 0 0 0 0 0 0 0
.............................................................................................................................................CGGGAAATGGAATATTCAAGAAC...................................................................................... 23 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................ATGCTAAAAACAAGTGTTTAAACTGT................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................TAATGGTTTCTGTGATCTTATTGTTC.......................................................................................................................................................... 26 0 5 1.00 5 1 1 0 2 0 0 0 0 1 0 0 0
...............CTTCATCGTTGTAACGGCTCTAAGGTG................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............CTTCATCGTTGTAACGGCTCTAAGGT................................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TGGAATATTCAAGAACC..................................................................................... 17 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................AGTTCATATATGTATAATGGTTTCTGT....................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TATCAAAAGGTTAGTAAACAAAATGT.......................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................TGAAATTTAGATAAAATAAACAATAT........................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................TCATATATGTATAATGGTTTCTGTGAT.................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................ATAATGGTTTCTGTGATCTTATTGT............................................................................................................................................................ 25 0 5 1.00 5 0 0 0 0 1 0 2 0 2 0 0 0
.............................................................................CGCTGTGATCTTATTGTTCTACGC..................................................................................................................................................... 24 2 20 0.75 15 0 0 0 0 0 0 0 15 0 0 0 0
............................................................................TATCTGTGATCTTATTGTTCTACG...................................................................................................................................................... 24 1 20 0.60 12 0 0 0 0 0 0 0 12 0 0 0 0
.......................................................................AATGGTTTCTGTGATCTTATTGTTCTAC....................................................................................................................................................... 28 0 20 0.50 10 6 0 0 0 0 0 2 0 2 0 0 0
.....................................................................TTAATGGTTTCTGTGATCTTATTGTT........................................................................................................................................................... 26 1 7 0.43 3 0 0 0 3 0 0 0 0 0 0 0 0
.............................................................................ATCTGTGATCTTATTGTTC.......................................................................................................................................................... 19 1 20 0.35 7 0 0 0 0 0 0 0 7 0 0 0 0
.........................................................................TGGTTTCTGTGATCTTATTGTTCT......................................................................................................................................................... 24 0 20 0.35 7 0 0 0 0 4 0 3 0 0 0 0 0
............................................................................TATCTGTGATCTTATTGTTC.......................................................................................................................................................... 20 1 20 0.30 6 0 0 0 0 0 0 0 6 0 0 0 0
........................................................................AGGGTTTCTGTGATCTTATTGTTC.......................................................................................................................................................... 24 1 20 0.30 6 0 6 0 0 0 0 0 0 0 0 0 0
.........................................................................TGGTTTCTGTGATCTTATTGTT........................................................................................................................................................... 22 0 20 0.30 6 0 0 0 0 6 0 0 0 0 0 0 0
.........................................................................TGGTTTCTGTGATCTTATTGTACTAC....................................................................................................................................................... 26 1 20 0.25 5 4 0 0 0 0 0 1 0 0 0 0 0
..............................................ATTACATACCAGTTCCTA.......................................................................................................................................................................................... 18 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................CTTCTGTGATCTTATTGTTCTACG...................................................................................................................................................... 24 1 20 0.25 5 0 0 0 0 0 0 0 5 0 0 0 0
.........................................................................TGGTTTCTGTGATCTTATTGATCTAC....................................................................................................................................................... 26 1 20 0.20 4 0 4 0 0 0 0 0 0 0 0 0 0
.....................................................................ATAATGGTTTCTGTGATCTTATTGTTCT......................................................................................................................................................... 28 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................TAATGGTTTCTGTGGTCTTATTGTTC.......................................................................................................................................................... 26 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................CTAATGGTTTCTGTGATCTTATTGTTC.......................................................................................................................................................... 27 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................TTGGGAAATGGAATCTTCAAGAACC..................................................................................... 25 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................AATGGTTTCTGTGATCTTATTGTTG.......................................................................................................................................................... 25 1 20 0.15 3 0 0 0 0 0 0 3 0 0 0 0 0
..........................................................................GGTTTCTGTGATCTTATTGTT........................................................................................................................................................... 21 0 20 0.15 3 0 0 0 1 2 0 0 0 0 0 0 0
.........................................................................TGGTTTCTGTGATCTTATTGTAC.......................................................................................................................................................... 23 1 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0
...........................................................................GTTTCTGTGATCTTATTGTTCTA........................................................................................................................................................ 23 0 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0
......................................................................TAGTGGTTTCTGTGATCTTATTGTTC.......................................................................................................................................................... 26 1 20 0.10 2 0 0 0 1 0 0 0 0 0 1 0 0
........................................................................ATGGTTTCTGTGATCTCATTGTTCTAC....................................................................................................................................................... 27 1 20 0.10 2 0 0 0 0 0 0 0 0 2 0 0 0
........................................................................ATGGTTTCTGTGATCTTAATGTTCTAC....................................................................................................................................................... 27 1 20 0.10 2 0 0 0 0 0 0 1 0 1 0 0 0
..........................................................................GGTTTCTGTGATCTTATTGT............................................................................................................................................................ 20 0 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0
........................................................................ATGGTTTCTGTGATCTTATTGTTCT......................................................................................................................................................... 25 0 20 0.10 2 0 0 0 0 0 0 1 0 1 0 0 0
....................................................................TATACTGGTTTCTGCGATCTTATTGTTC.......................................................................................................................................................... 28 2 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................ATTAATGGTTTCTGTGATCTTATTGTTC.......................................................................................................................................................... 28 2 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................AAGTGTGTGAACTGTTTA................................................................................................................ 18 2 16 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................GGTTTCTGTGATCTTATTGTTCTACG...................................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................AATGGTTTCTGTGATCTTATTGTTCTA........................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TCTGTGATCTTATTGTTCTAC....................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................ATGGTTTCCGTGATGTTATTGTTCTAC....................................................................................................................................................... 27 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................ATGGTTTCTGTGATCTTATTGTTGT......................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................CTGTGATCTTATTGTTCTA........................................................................................................................................................ 19 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................TCTGTGATCTTATTATTCTAC....................................................................................................................................................... 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
........................................................................ATGGTTTCTGTGATCTTATTGTTCTAG....................................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................AATGGTTTCTGTCATCTTATTGTTC.......................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................ATGGTTTGTGTGATCTTATTGTTC.......................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................TGGTTTCTGTGATCTTATTGCTCTAC....................................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................AATGGTTTTTGTGTTCTTATTGTTC.......................................................................................................................................................... 25 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
...................................TAAGGTGTTTCATTA........................................................................................................................................................................................................ 15 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................TTTCTGTGATCTTATTGTTCT......................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................AAAGGTTTCTGTGATCTTATTGTTCTAC....................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................ATGGTTTCTGTGATCTTATTGTGC.......................................................................................................................................................... 24 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................ATGGTTTCTGTGATC................................................................................................................................................................... 15 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................TGGTTTCTGTGATCTTA................................................................................................................................................................ 17 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................AATGGTTTCTGTGATCTTATTGTAC.......................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................TGGTATCTGTGATCTTATTGTTC.......................................................................................................................................................... 23 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................GCTGTGATCTTATTGTTCTACG...................................................................................................................................................... 22 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................................AATGGTTTCTGTGATCTTATTGGTC.......................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................ATGGTTTCTGTGATCTTAATGTTCT......................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................ATGGTGTCTGTGATCTTATTGTTC.......................................................................................................................................................... 24 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................AATGGTTTCTGTGATCTTATTGTTCT......................................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................GGTTTCTGTGATCTTATTGGTC.......................................................................................................................................................... 22 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................AATGGTTTTTGTGATCTTATTGTTC.......................................................................................................................................................... 25 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................GGCTTCTGTGATCTTATTGTTCTAC....................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................ATGGTTTCTGGGATCTTATTGTTC.......................................................................................................................................................... 24 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:17872685-17872934 - dsi_28858 GT--------GAAACAAATACCAGAAGTAGCAACATTGCCGAGATTCCACAAAATAATGTATGTTCA-------AGTATATAC-ATATTACCAAAGACACTAGAATAACAAGATGCGTAACTTTATACGATTTTTGTTCAC----------------------------------------------------------------------------------------AAATTTGACAAATTAAGCCCTTTACCTTATAAGTTCTTGGACTTTAAATCTATTTTATTTGTTATAAATTAAAATAGTTTTCCAATC-------------------------------ATTTGTTTTACATTTT-TTAACATTGTTTAACGTTAAG------------G
droSec2 scaffold_30:123081-123330 + GT--------GATACAAATACCAGAAGTAGCAACATTGCCGAGATTCAACAAAATAATGTATGTTCA-------AGTATATAC-ATATTACCAAAGACACTAGAATAACCAGATGCGTAACTTTATACGATTTTTGTTCAC----------------------------------------------------------------------------------------AAATTTGACAAATTAAGCCCTTTACTTTATAAGTTTTTGGTCTTTAAATCTATTTTATTTGTTATAAATTAAAATAGTTTTTCAATC-------------------------------ATTTGTTTTACATTGT-TTAACATTGTTTAACGTTAAG------------G
dm3 chrUextra:3293194-3293401 + AG--------CAACGTTCTTCCAAAAA-GGCA---------------------ATAAAGTGCGTTTA-------AATTTACGC-ATACAGT----GATAGCA-GACAGCTGTATGTGTGCACACGTATGCTCATGCATTGT----------------------------------------------------------------------------------------AAATTTGACAAAATATGCCCTTCACCTTAGAAGTTCTTTGACTTTAAATCTATATTATTTTTGATCAATTGGCACCATGCGAAAAAT-------------------------------TCTTGCTTTGCATTGCCTTAACG----------------------------
droEre2 scaffold_4845:2280940-2281197 - AT--------TCCACAAAGAA------------------------------------TTCAT----A-------AATGTATACTCTTGAACCAAAGACAATAGAATAACAAGATCCGTAACGGCATACGATTTTTT----------------GTGCTGGCTCTAGAGCTGGCTCCCAGGCTCTCTCTT----TTGTCCGAGCCAGCAGCTCTACATATGCATGTATTGTAAATTTAACAAAAT-TGCCTTTCA-CTTACAAGTTAATGTACTTTAAATCAATATTATTTTTGATCAATAGCCACCATGTG----AC-------------------------------TCTAATTTTGCATTGCCTTAACA----------------------------
droYak3 v2_chrUn_265:7245-7403 + AG--------TATACCCTTT--------------------------------------------------------------------TACCAAAGACATTAGAATAACAAGATGCGTAACGCCATACGATTTTTTTGCACACGATT-------------------------------------------------------------------------------------------------------TTTTCGTGGAAGTTCTTAGACTTTAAATCTATATTATTTTTTATAAATGGACACCACTT-AAAAAC-------------------------------TCTAGTCTTGCATTGCCTTAACA----------------------------
droEug1 scf7180000408984:780375-780450 - GT--------GAGATTCAGATCAGGAGTAACAATGTTGGTGATAATCAACAAACCAATGTATGTCCCATTTTTAAGTATTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------A
droBia1 scf7180000301495:168886-168957 + TT--------GAAACACATACCAAAATTAACAACGTTACTGAGAATC---AATCCAATGTAAGTCTATCT-----------AC-ATAGTATCTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
droTak1 scf7180000415786:128174-128253 + TT--------GAAGCACATCCCAGAAGTAGCAACGTTGCTGAGAATCAACAACCCAATGTACGACAAACT-------TTATA----GTAACTATAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------A
droEle1 scf7180000491238:978622-978694 - TC--------GAGACACAACCCAGAAGTAGCAACTTTGCTGAAACTCACCACAGCAATGTATGTCCAACT-------GTTT------TTACCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
droRho1 scf7180000768107:3140-3345 + TA--------GTACCAAAGACCAATATAATC------TCT---------------------------------------------------------------------AAGATGCGTAACGCCATACGATTTTTTTTCACACGAATTTTTTGTGCTGGCTTTTCAACTGGCTTTTTG-CTCTCTTTCCCAAACGCCAGAGAG--------------------------AGAGCTGTCGAAATATACTCTTTATTTTAAAATTCT----------------------------------AACATTA--TTAATAAT-------------------------------ACTTATATTGTATTGCCTTTATA---------------TTTACTTTATTTA
droFic1 scf7180000454042:51564-51690 - GT--------GAAACGCACTCCAGAAGTAACAATGTCGCTGAAATTCGACAAAACAATGTAAGTCAC-------AGCATA-AC-ATACTA-------------------------------------------------------------------------------------------------------------------------------------------------TACAA--------------------------------------------------------------ATAACTTCCTAAGCACAAAAATTAAATTGATAATTATTATGCAACTT-------------------T----------------------------T
droKik1 scf7180000301867:2756-2820 + AAATTTGTTGGAAGGAAGTCCCAAGAAGAGCAG---TGCTGATAATTCACAAAACCAGGCAAGTTTA-------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 Unknown_group_1:60082-60134 + GT--------GGCACACAGCT-AGCAAATGCAA--TTACTGACAATTCCCAAACCAATGTTTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_42:181440-181492 + GT--------GGCACACAGCT-AGCAAATGCAA--TTACTGACAATTCCCAAACCAATGTTTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GT--------GAAACAAATACCAGAAGTAGCAACATTGCCGAGATTCCACAAAATAATGTATGTTCA-------AGTATATAC-ATATTACCAAAGACACTAGAATAACAAGATGCGTAACTTTATACGATTTTTGTTCAC----------------------------------------------------------------------------------------AAATTTGACAAATTAAGCCCTTTACCTTATAAGTTCTTGGACTTTAAATCTATTTTATTTGTTATAAATTAAAATAGTTTTCCAATC-------------------------------ATTTGTTTTACATTTT-TTAACATTGTTTAACGTTAAG------------GSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................AACAAGATGCGTAACT....................................................................................................................................................................................................................................................................................16814.001120000000000112000000
......................................................................................................GAATAACAAGATGCGTAACT....................................................................................................................................................................................................................................................................................2067.0042000040000002000000
..........................................................................................................AACAAGATGCGTAACTTTATACGATT..........................................................................................................................................................................................................................................................................2615.00500000000005000000
.........................................................................................................TAACAAGATGCGTAACT....................................................................................................................................................................................................................................................................................1782.2518000000000018000000
.........................................................................................................TAACAAGATGCGTAACTTTATACGA............................................................................................................................................................................................................................................................................2511.00100000010000000000
.............................................................................................................AAGATGCGTAACTTTATACGATT..........................................................................................................................................................................................................................................................................2311.00100000000001000000
..........................................................................................................AACAAGATGCGTAACTTTATACGAT...........................................................................................................................................................................................................................................................................2511.00100000000001000000
..................TACCAGAAGTAGCAACATTGCCGAGATT................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000001000
..................TACCAGAAGTAGCAACATTGCCGAGA..................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
...................ACCAGAAGTAGCAACATTGCCGAGA..................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
.........................................................................................................TAACAAGATGCGTAACTT...................................................................................................................................................................................................................................................................................1820.50100001000000000000
....................................................................................ATATTACCAAAGACACTAGAATAACAA...............................................................................................................................................................................................................................................................................................2720.50100000000010000000
....................................................................................ATATTACCAAAGACACTAGA......................................................................................................................................................................................................................................................................................................2020.50100000000010000000
....................................................................................ATATTACCAAAGACACTAGAATT...................................................................................................................................................................................................................................................................................................2340.50200000002000000000
......................................................................................................GAATAACAAGATGCGTAACTT...................................................................................................................................................................................................................................................................................2120.50100001000000000000
....................................................................................ATATTACCAAAGACACTAGAATAACA................................................................................................................................................................................................................................................................................................2620.50100000000010000000
.....................................................................................TATTACCAAAGACACTAGAA.....................................................................................................................................................................................................................................................................................................2070.43300000010110000000
........................................................................................TACCAAAGACACTAGAATAACAAGAT............................................................................................................................................................................................................................................................................................26200.20400000022000000000
.....................................................................................TATTACCAAAGACACTAGAATAACA................................................................................................................................................................................................................................................................................................2550.20100000000000010000
.......................................................................................TTACCAAAGACACTAGAATAACAAGA.............................................................................................................................................................................................................................................................................................26200.10200000000110000000
........................................................................................TACCAAAGACACTAGAA.....................................................................................................................................................................................................................................................................................................17200.10200000000200000000
.........................................................................................ACCAAAGACACTAGA......................................................................................................................................................................................................................................................................................................15200.10200000002000000000
......................................................................................................GAATAACAAGATGCGTA.......................................................................................................................................................................................................................................................................................17200.10200000000020000000
............................................................................................AAAGACACTAGAATAACAAGAT............................................................................................................................................................................................................................................................................................22200.05100000010000000000
........................................................................................TACCAAAGACACTAGA......................................................................................................................................................................................................................................................................................................16200.05100000000001000000
...............................................................................................GACACTAGAATAACAAGATGCGT........................................................................................................................................................................................................................................................................................23200.05100000000001000000
........................................................................................TACCAAAGACACTAGAATAACAAGA.............................................................................................................................................................................................................................................................................................25200.05100000010000000000
.........................................................................................ACCAAAGACACTAGAATAACAAGA.............................................................................................................................................................................................................................................................................................24200.05100000000000100000
.........................................................................................ACCAAAGACACTAGAATAACAAGATGCG.........................................................................................................................................................................................................................................................................................28200.05100000010000000000
.......................................................................................TTACCAAAGACACTAGAATAACAAGATG...........................................................................................................................................................................................................................................................................................28200.05100000001000000000
..........................................................................................CCAAAGACACTAGAATAACAAGATGCG.........................................................................................................................................................................................................................................................................................27200.05100000001000000000
................................................................................................ACACTAGAATAACAAGATGCG.........................................................................................................................................................................................................................................................................................21200.05100000000001000000
.............................................................................................................AAGATGCGTAACTTC..................................................................................................................................................................................................................................................................................15200.05100000000001000000
.......................................................................................TTACCAAAGACACTAGAATAACAAGATGC..........................................................................................................................................................................................................................................................................................29200.05100000000000001000
droSec2
GT--------GATACAAATACCAGAAGTAGCAACATTGCCGAGATTCAACAAAATAATGTATGTTCA-------AGTATATAC-ATATTACCAAAGACACTAGAATAACCAGATGCGTAACTTTATACGATTTTTGTTCAC----------------------------------------------------------------------------------------AAATTTGACAAATTAAGCCCTTTACTTTATAAGTTTTTGGTCTTTAAATCTATTTTATTTGTTATAAATTAAAATAGTTTTTCAATC-------------------------------ATTTGTTTTACATTGT-TTAACATTGTTTAACGTTAAG------------GSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............TACAAATACCAGAAGTAGCAACATTGCA......................................................................................................................................................................................................................................................................................................................................................................2811.0010010
..........................................................................................................AACCAGATGCGTAACTTTATACGA............................................................................................................................................................................................................................................................................2411.0010100
dm3
AG--------CAACGTTCTTCCAAAAA-GGCA---------------------ATAAAGTGCGTTTA-------AATTTACGC-ATACAGT----GATAGCA-GACAGCTGTATGTGTGCACACGTATGCTCATGCATTGT----------------------------------------------------------------------------------------AAATTTGACAAAATATGCCCTTCACCTTAGAAGTTCTTTGACTTTAAATCTATATTATTTTTGATCAATTGGCACCATGCGAAAAAT-------------------------------TCTTGCTTTGCATTGCCTTAACG----------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................................................TTTTTGATCAATTGGCACCATGC.........................................................................................232036.4572900000000000000000000000000000000020000000000006600001650000000000000000000000000000000000000000000000000000000000000001000000000000000000000003400003340000107000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........................................................................................T----GATAGCA-GACAGCTGTATGTGT........................................................................................................................................................................................................................................................................................232035.307060000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000020000200002000000000000000000010000000000000000000000000000000000000000000000000000000004000001310517500000120000000000000004000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000130000000000
........................................................................................................................................................................................................................................TTTGACAAAATATGCCCTTCACCTTA............................................................................................................................................262030.006000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001700000000000000000000100000000000020000090000000000000000000000000000000000091000000000000000000000000000005460000000000000000000000000000000000000000000000000000000000000000000000000000000000900000000000000005000000000
..............................................................................................................................................................................................................................................................................................TTTTTGATCAATTGGCACCATGCG........................................................................................242022.70454000000000000000000000000000000000000000000420220000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000016640000000000000000000000000000000000000000000000019800000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000104000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TTTTTGATCAATTGGCACCATGCGA.......................................................................................252014.7529500000000000000000000000000000000020000000000000004100000000000000000000000000000000000020000000000000000000000000000000000000000000000000000720000000000000017800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TTTTTGATCAATTGGCACCATGCGAA......................................................................................262013.1026200000000000000000000000000000000001000000000000000012000000000000000000000000000000000000000000000000000100000000000000000000001000000000000000000212000000000000000000000000000000000000000000000000000000000000035000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TTTGACAAAATATGCCCTTCACCTT.............................................................................................................................................252010.25205000000000000000000000001000000500000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000700000000060000097086000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TTTGACAAAATATGCCCTTCACC...............................................................................................................................................23209.00180000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TTTTGATCAATTGGCACCATGCGA.......................................................................................24207.151430000000000000000000000000000000000000000000850000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000004700000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000030000000
...............................................................................................................................................................................................................................................................................................TTTTGATCAATTGGCACCATGCG........................................................................................23206.85137000000000000000000000000000000000000000000000000000400000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000003000910000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TTTTGATCAATTGGCACCATGC.........................................................................................22206.40128000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000990000000000000000000000000270000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
..........................................................................................T----GATAGCA-GACAGCTGTATGTGTGCA.....................................................................................................................................................................................................................................................................................26205.451090000000000000000000000000000042000000000000000000200000000000000000000000000000000000000000000001000000200025000000000000000000000000000000000000000000000003000000000000000000000000000000000000000002500000000000000000000000004000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000010000000000
.........................................................................................................CAGCTGTATGTGTGCACACGTATG.............................................................................................................................................................................................................................................................................24205.201040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000200000011521600000000000059000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000
..........................................................................................T----GATAGCA-GACAGCTGTATGTGTGC......................................................................................................................................................................................................................................................................................25204.85970000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000100000000000000000000000000001000000017004040000000000000000000000020005290000000000000000000000000000000000000000100008001200000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000170000000000
.......................................................................................................GACAGCTGTATGTGTGCACACGT................................................................................................................................................................................................................................................................................23204.25850000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300380000140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TTTTTGATCAATTGGCACCATG..........................................................................................22203.857700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000001000000000000000000001000000000000000000000000000000000000000000073000000000000000000000000000000000000
..........................................................................................T----GATAGCA-GACAGCTGTATGTGTG.......................................................................................................................................................................................................................................................................................24203.707400000000000020000000001000000000000000001000000000100000000000000000000000000000000000000000010100000060000003100000000000000000000000000000000000000100000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000051000000000000000000000000000000000000000000000001000000000000000000000003000000000000
........................................................................................................................................................................................................................................TTTGACAAAATATGCCCTTCACCTTAG...........................................................................................................................................27203.657300000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000000000000000000000000000069000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................................................................................TTTGACAAAATATGCCCTTCACCT..............................................................................................................................................24203.507000002000000000000000000070000000000000000000010000070400000000000000000000000000000029000000000000000000000000000000000000000000100000000000000060000071050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TTTTGATCAATTGGCACCATGCGAA......................................................................................25203.356700000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CCCTTCACCTTAGAAGTTCTTTGACT..............................................................................................................................26203.2064000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000421900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TACGC-ATACAGT----GATAGCA-GA.....................................................................................................................................................................................................................................................................................................21203.106200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000001000000000000000000000000000000000060000
..............................................................................TACGC-ATACAGT----GATAGCA-GACAGC.................................................................................................................................................................................................................................................................................................25202.70540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000110000000000000160000000000000000000000000000000000000000000000000000000000000000000000000000025000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CCCTTCACCTTAGAAGTTCTTTGACTT.............................................................................................................................27202.655300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000006044001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TTTTTGATCAATTGGCACCAT...........................................................................................21202.5050000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000020000000000000000000000000310000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TTTTTGATCAATTGGCACCATGCGAAT.....................................................................................27202.304600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000004300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................ATACAGT----GATAGCA-GACAGCT................................................................................................................................................................................................................................................................................................21202.254500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000044000
..............................................................................................................................................................................................................................................................................................TTTTTGATCAATTGGCACCATGCGAAA.....................................................................................27202.004000000000000000000000000000000000000000000000000050000000000100000000000000000000000400000000000000000000000000000001000000000000000000000000500000000230000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................GATAGCA-GACAGCTGTATGTGTGCA.....................................................................................................................................................................................................................................................................................25201.9038000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124000000000000000010000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TATGCCCTTCACCTTAGAAGTTCTT...................................................................................................................................25201.803600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003400000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TTTGATCAATTGGCACCATGC.........................................................................................21201.65330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000003000700000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000900000000000000000003000000002000000000000000000000000000
.......................................................................................................................................................................................................................................................CCTTCACCTTAGAAGTTCTTTGACT..............................................................................................................................25201.553100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000510970000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TTTTTGATCAATTGGCACCATGCGAAAT....................................................................................28201.4028000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................T----GATAGCA-GACAGCTGTATGTG.........................................................................................................................................................................................................................................................................................22201.35270000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000401000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800000080000000000000000000000000000000000000000000000001003000000000000000000000000000000000000001000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TTTTGATCAATTGGCACCATG..........................................................................................21201.3026000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000001200000000000000000
...............................................................................................................................................................................................................................................................................................TTTTGATCAATTGGCACCATGCGT.......................................................................................24201.302600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000260000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TTTGATCAATTGGCACCATGCGAA......................................................................................24201.152300000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................CAGT----GATAGCA-GACAGCTGTATGTG.........................................................................................................................................................................................................................................................................................25201.152300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.........................................................................................................CAGCTGTATGTGTGCACACGTATGC............................................................................................................................................................................................................................................................................25201.1523000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TATGCCCTTCACCTTAGAAGTTCT....................................................................................................................................24201.102200000001000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000002000000000000000000000005011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................................................................................................................................TTTTTGATCAATTGGCACCA............................................................................................20201.052100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000002000000000502000000000000000000000000
..................................................................................................................................................................................................................................................TATGCCCTTCACCTTAGAAGTTCTTT..................................................................................................................................26201.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000010000000000000000000180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................T----GATAGCA-GACAGCTGTATGTGTGCAC....................................................................................................................................................................................................................................................................................27201.00200000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000010070000000000000000010500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................TGCCCTTCACCTTAGAAGTTCTTTGAC...............................................................................................................................27200.951900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
....................................................................................................CA-GACAGCTGTATGTGTGCACACGT................................................................................................................................................................................................................................................................................25200.851700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..........................................................................................T----GATAGCA-GACAGCTGTA.............................................................................................................................................................................................................................................................................................18200.851700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TCAATTGGCACCATGCGAAAAAT-------------------------------TCT................................................26200.851700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CACCTTAGAAGTTCTTTGACT..............................................................................................................................21200.80160000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000
.................................................................................................TAGCA-GACAGCTGTATGTGTGCAC....................................................................................................................................................................................................................................................................................24200.801600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TATGCCCTTCACCTTAGAAGT.......................................................................................................................................21200.80160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000000000000000000000010000000000000100000080000002000000000000000000000
..........................................................................................................................................................................................................................................TGACAAAATATGCCCTTCACCTTAGAA.........................................................................................................................................27200.801600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TTTACGC-ATACAGT----GATAGCA-GA.....................................................................................................................................................................................................................................................................................................2340.7530000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................ATTGT----------------------------------------------------------------------------------------AAATTTGACAAAATATGCCCT....................................................................................................................................................26200.701400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TTGATCAATTGGCACCATGCG........................................................................................21200.70140000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000300000000000050000000000000000000000000200000000
......................................................................................................................................................................................................................................AATTTGACAAAATATGCCCTTCACCT..............................................................................................................................................26200.701400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................TGTGTGCACACGTATGCTCATGC......................................................................................................................................................................................................................................................................23200.701400000000000000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................CGC-ATACAGT----GATAGCA-GACAGCT................................................................................................................................................................................................................................................................................................24200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000604000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CCCTTCACCTTAGAAGTTCTTTGAC...............................................................................................................................25200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
............................................................................................................................................T----------------------------------------------------------------------------------------AAATTTGACAAAATATGCCCTTCACC...............................................................................................................................................27200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TTTGACAAAATATGCCCTTCACCTTAGAA.........................................................................................................................................29200.651300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GACAGCTGTATGTGTGCACAC..................................................................................................................................................................................................................................................................................21200.651300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000
..........................................................................................................AGCTGTATGTGTGCACACGTATGC............................................................................................................................................................................................................................................................................24200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000006000000000000000000000000000000000000000000000000000000000000000000000000000004000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TGCACACGTATGCTCATGCATTGT----------------------------------------------------------------------------------------.........................................................................................................................................................................24200.60120000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000
..........................................................................................................AGCTGTATGTGTGCACACGTATGCT...........................................................................................................................................................................................................................................................................25200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000900000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................ATCAATTGGCACCATGCGAAA.....................................................................................21200.601200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000010000000000000000000000000000
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........................................................................................................ACAGCTGTATGTGTGCACACG.................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TCTATATTATTTTTGATCAATTGGC................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................ATTTGACAAAATATGCCCTTC..................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................ATTATTTTTGATCAATTGG.................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TTTTGATCAATTGGCACCATGCGAAA.....................................................................................26200.1020000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TATTATTTTTGATCAATTGG.................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
..................TTCCAAAAA-GGCA---------------------ATAAAGTG.................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGACAAAATATGCCCTTCACCTTAGA..........................................................................................................................................26200.1020000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................GC-ATACAGT----GATAGCA-GACAGCTG...............................................................................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGACAAAATATGCCCTTCACCTTA............................................................................................................................................24200.1020000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................C-ATACAGT----GATAGCA-GACAGCTG...............................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TGATCAATTGGCACCATGCGA.......................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
droEre2
AT--------TCCACAAAGAA------------------------------------TTCAT----A-------AATGTATACTCTTGAACCAAAGACAATAGAATAACAAGATCCGTAACGGCATACGATTTTTT----------------GTGCTGGCTCTAGAGCTGGCTCCCAGGCTCTCTCTT----TTGTCCGAGCCAGCAGCTCTACATATGCATGTATTGTAAATTTAACAAAAT-TGCCTTTCA-CTTACAAGTTAATGTACTTTAAATCAATATTATTTTTGATCAATAGCCACCATGTG----AC-------------------------------TCTAATTTTGCATTGCCTTAACA----------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................GGCTCTAGAGCTGGCTCCCAGGCT.........................................................................................................................................................................................................................2411.0011000000
...............................................................................................................................................................CTCTAGAGCTGGCTCCCAGGC..........................................................................................................................................................................................................................2111.0010001000
............................................................................................................................ATACGATTTTTT----------------GTGCTGGCT.............................................................................................................................................................................................................................................2111.0010000010
.......................................................................................................................................T----------------GTGCTGGCTCTAGAGCTGG...................................................................................................................................................................................................................................2060.1710000010
.............................................................................................................................................................................................................................................................................................................................................................TAATTTTGCATTGCCTTAACA----------------------------21200.0511000000
droYak3
AG--------TATACCCTTT--------------------------------------------------------------------TACCAAAGACATTAGAATAACAAGATGCGTAACGCCATACGATTTTTTTGCACACGATT-------------------------------------------------------------------------------------------------------TTTTCGTGGAAGTTCTTAGACTTTAAATCTATATTATTTTTTATAAATGGACACCACTT-AAAAAC-------------------------------TCTAGTCTTGCATTGCCTTAACA----------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................TAACAAGATGCGTAACGCCATACGAT...........................................................................................................................................................................................................................................................................26201.7034031120000000
....................................................................................................TAGAATAACAAGATGCGTAACGCC..................................................................................................................................................................................................................................................................................24200.7515014000100000
....................................................................................................TAGAATAACAAGATGCGTAACGCCA.................................................................................................................................................................................................................................................................................25200.7014000100130000
.....................................................................................................AGAATAACAAGATGCGTAACGCCA.................................................................................................................................................................................................................................................................................24200.7014013100000000
......................................................................................................................................................................................................................................................................................................................AAAAAC-------------------------------TCTAGTCTTGCATTGCCT.................................24200.6012010200000000
......................................................................................................................................................................................................................................................................................................................AAAAAC-------------------------------TCTAGTCTTGCATTGCC..................................23200.40805300000000
....................................................................................................TAGAATAACAAGATGCGTAACGCCAT................................................................................................................................................................................................................................................................................26200.25500320000000
.........................................................................................................TAACAAGATGCGTAACGCCATACG.............................................................................................................................................................................................................................................................................24200.20404000000000
....................................................................................................TAGAATAACAAGATGCGTAACG....................................................................................................................................................................................................................................................................................22200.20401000030000
......................................................................................................................................................................................................................................................................................................................AAAAAC-------------------------------TCTAGTCTTGCATTGCCTT................................25200.15303000000000
....................................................................................................TAGAATAACAAGATGCGTAACGCCATA...............................................................................................................................................................................................................................................................................27200.15300300000000
...................................................................................................TTAGAATAACAAGATGCGTAACGCC..................................................................................................................................................................................................................................................................................25200.10200200000000
......................................................................................................................................................................................................................................................................................................................AAAAAC-------------------------------TCTAGTCTTGCATTGCCTTAAC.............................28200.10201100000000
...................................................................................................................................................................................................................................................................................................................TT-AAAAAC-------------------------------TCTAGTCTTGCATTGCCT.................................26200.10201100000000
...............................................................................................................................................................................................................................................................................................................CCACTT-AAAAAC-------------------------------TCTAGTCTTGCAT......................................25200.10202000000000
......................................................................................................................................................................................................................................................................................................................AAAAAC-------------------------------TCTAGTCTTGCATTGCCC.................................24200.10200200000000
.............................................................................................................................TACGATTTTTTTGCACACGATT-------------------------------------------------------------------------------------------------------TT..................................................................................................................................................24200.10200020000000
....................................................................................................................................................................................................................................................................................................................T-AAAAAC-------------------------------TCTAGTCTTGCATTGCCT.................................25200.10200200000000
...................................................................................................................................................................................................................................................................................................................TT-AAAAAC-------------------------------TCTAGTCTTGCATTGCC..................................25200.05100100000000
....................................................................................................TAGAATAACAAGATGCGTAACGCCATAA..............................................................................................................................................................................................................................................................................28200.05101000000000
.....................................................................................................AGAATAACAAGATGCGTAACGCCATAC..............................................................................................................................................................................................................................................................................27200.05101000000000
....................................................................................................TAGAATAACAAGATGCGTAA......................................................................................................................................................................................................................................................................................20200.05100000000001
................................................................................................................................GATTTTTTTGCACACGATT-------------------------------------------------------------------------------------------------------TT..................................................................................................................................................21200.05100100000000
.......................................................................................................................................................................................................................................................................................................................AAAAC-------------------------------TCTAGTCTTGCATTGCCTT................................24200.05101000000000
........................................................................................................ATAACAAGATGCGTAACGCCATA...............................................................................................................................................................................................................................................................................23200.05101000000000
....................................................................................................................................TTTTTGCACACGATT-------------------------------------------------------------------------------------------------------TTT.................................................................................................................................................18200.05101000000000
......................................................................................................................................................................................................................................................................................................................AAAAAC-------------------------------TCTAGTCTTGCATTG....................................21200.05101000000000
...................................................................................................TTAGAATAACAAGATGCGTAACGCCA.................................................................................................................................................................................................................................................................................26200.05101000000000
.............................................................................................................................TACGATTTTTTTGCACACGATT-------------------------------------------------------------------------------------------------------TTTTC...............................................................................................................................................27200.05101000000000
..................................................................................................................................................................................................................................................................................................................CTT-AAAAAC-------------------------------TCTAGTCTTGCATTGCCTT................................28200.05101000000000
.............................................................................................................................TACGATTTTTTTGCACACGATC-------------------------------------------------------------------------------------------------------....................................................................................................................................................22200.05100100000000
..................................................................................................................................................................................................................................................................GAAGTTCTTAGACTTTAAATCT......................................................................................................................22200.05100100000000
....................................................................................................TAGAATAACAAGATGCGTAACGCCAC................................................................................................................................................................................................................................................................................26200.05100100000000
....................................................................................................TAGAATAACAAGATGCGTAACGC...................................................................................................................................................................................................................................................................................23200.05101000000000
..........................................................................................................AACAAGATGCGTAACGCCATACGATT..........................................................................................................................................................................................................................................................................26200.05101000000000
droEug1
GT--------GAGATTCAGATCAGGAGTAACAATGTTGGTGATAATCAACAAACCAATGTATGTCCCATTTTTAAGTATTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------ASizeHit CountTotal NormTotal
No Reads
droBia1
TT--------GAAACACATACCAAAATTAACAACGTTACTGAGAATC---AATCCAATGTAAGTCTATCT-----------AC-ATAGTATCTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droTak1
TT--------GAAGCACATCCCAGAAGTAGCAACGTTGCTGAGAATCAACAACCCAATGTACGACAAACT-------TTATA----GTAACTATAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------ASizeHit CountTotal NormTotal
No Reads
droEle1
TC--------GAGACACAACCCAGAAGTAGCAACTTTGCTGAAACTCACCACAGCAATGTATGTCCAACT-------GTTT------TTACCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droRho1
TA--------GTACCAAAGACCAATATAATC------TCT---------------------------------------------------------------------AAGATGCGTAACGCCATACGATTTTTTTTCACACGAATTTTTTGTGCTGGCTTTTCAACTGGCTTTTTG-CTCTCTTTCCCAAACGCCAGAGAG--------------------------AGAGCTGTCGAAATATACTCTTTATTTTAAAATTCT----------------------------------AACATTA--TTAATAAT-------------------------------ACTTATATTGTATTGCCTTTATA---------------TTTACTTTATTTASizeHit CountTotal NormTotal
No Reads
droFic1
GT--------GAAACGCACTCCAGAAGTAACAATGTCGCTGAAATTCGACAAAACAATGTAAGTCAC-------AGCATA-AC-ATACTA-------------------------------------------------------------------------------------------------------------------------------------------------TACAA--------------------------------------------------------------ATAACTTCCTAAGCACAAAAATTAAATTGATAATTATTATGCAACTT-------------------T----------------------------TSizeHit CountTotal NormTotal
No Reads
droKik1
AAATTTGTTGGAAGGAAGTCCCAAGAAGAGCAG---TGCTGATAATTCACAAAACCAGGCAAGTTTA-------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
GT--------GGCACACAGCT-AGCAAATGCAA--TTACTGACAATTCCCAAACCAATGTTTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
GT--------GGCACACAGCT-AGCAAATGCAA--TTACTGACAATTCCCAAACCAATGTTTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads

Generated: 05/18/2015 at 02:38 PM