ID:

dsi_28822

 Coordinate:

x:7946497-7946734 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.5 -11.5 -11.5

Flybase annnotation

five_prime_UTR [x_7946375_7946451_+]; CDS [x_7946452_7946496_+]; exon [x_7946735_7947848_+]; CDS [x_7946735_7947610_+]; exon [x_7946375_7946496_+]; intron [x_7946497_7946734_+]; Antisense to intron [x_7926594_7948141_-]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACAAGATGACGAGATCGACCTACATTTGGGCGCTGGCCGCCTGCCTGATCGTAAGTGTTCAAGCTCGAAATCTTAGGATTAATCCCAAGAAAACCAAGTCTTTCAATTCTGGCTGCTTTCGTTTGTGCCATGTAAATCGTACATGAAAAGCAACTTGACTTTCCTTTAAATTACTTGAAACGAAATCAAGCTATCTATCGATCTTAGACAAAAGATCATTTTCGATCTTAAGAAATGGTATATGTCGATCCAATTCTAATCCATTTTCCCCACCTTATTTACTTTTAGGCCTGTGCGAGCGCCAACTACGGCAGTTCCCAGGGCTATGGACCCGAGTC
**********************************************************************************************************.((.((.((((((....(((((.((....)).)))))...)))))).)).))..********************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 M023
head
 M053
female body
 O001
Testis
 O002
Head
....GATGACGAGATCGACCTA............................................................................................................................................................................................................................................................................................................................ 18 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TACATGAAAAGCAACTTGACT.................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..AAGATGACGAGATCGACCTACATTTGGGC................................................................................................................................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................TTCTGGCTGCTTTCGTTTGTGC.................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................AGTTCCCAGGGCTATGGA........ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................GGCCGCCTGCCTGATCGC.............................................................................................................................................................................................................................................................................................. 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................GGCCGCCTGCCTGATCG............................................................................................................................................................................................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................GCCTGTGCGAGCGCCAACTACG............................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................TATGTCGTTGCAATTCTACTCC............................................................................ 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................GCCTGTGCGAGCGCCAA................................. 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....GATGACGAGATCGACCTC............................................................................................................................................................................................................................................................................................................................ 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................ACCTACATTTGGGCGCTG............................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................GTGCGAGCGCCAACTACGGCA......................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......GACGAGATCGACCTA............................................................................................................................................................................................................................................................................................................................ 15 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................GGCCGCCTGCCTGATCGT.............................................................................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................ACGGCAGTTCCCAGGGC.............. 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................AGCGCCAACTACGGCAGTTCCCAGGGA.............. 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...AGATGACGAGATCGA................................................................................................................................................................................................................................................................................................................................ 15 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..AAGATGACGAGATCGACCTACA.......................................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................TTTAGGCCTGTGCGAGCGCCA.................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................ATTTTCCCCACCTTATTTACTTTTAG.................................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................CGAAACCAGGCTATCTATCCA......................................................................................................................................... 21 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....GATGACGAGATCGACCTACA.......................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TACATGAAAAGCAACTTGACTT................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................GCAGTTCCCAGGGCTATG.......... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TGCTTTCGTTTGTGCCAT............................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........CGAGATCGACCTACATTTGGG.................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
ACAAGATGACGAGATCGACCTACA.......................................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......TGACGAGATCGACCTA............................................................................................................................................................................................................................................................................................................................ 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................AAGTCTTTCAATTCTGGCTGCTT............................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................ATTCTGGCTGCTTTCGTTTGTGC.................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................CGCCTGCCTGATCGTAAGTGT........................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GTCGATCCTAAGAGATGG.................................................................................................... 18 3 20 0.85 17 1 1 0 0 0 10 1 1 1 1 1
ACAAGATGACGAGAT................................................................................................................................................................................................................................................................................................................................... 15 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................ATGAAAAGCAAATTGACT.................................................................................................................................................................................. 18 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
...........................GGGCTCTGACCGCGTGCCTG................................................................................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
......................................GCCTAACTGATCGTAAG........................................................................................................................................................................................................................................................................................... 17 2 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................................................................................................GCCTGTTCGAGCGTCATC................................ 18 3 20 0.15 3 0 0 0 2 0 0 1 0 0 0 0
................................................................................................................................................................................................................................................................................................GCCTGTTCGAGCGTC................................... 15 2 20 0.15 3 0 0 0 3 0 0 0 0 0 0 0
.....................................CGCCTGCCTGATCGCCTGTG......................................................................................................................................................................................................................................................................................... 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................GAAATCAGGCGATCTAT............................................................................................................................................ 17 2 16 0.06 1 0 0 0 1 0 0 0 0 0 0 0
..........................TGGGCGCTTGTCGCGTGCC..................................................................................................................................................................................................................................................................................................... 19 3 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TACTTGAACCGAGATCA...................................................................................................................................................... 17 2 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................CTAGCGCAAACTACGG........................... 16 2 18 0.06 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................GCCTGTTCGAGCGTCA.................................. 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................CCTGTTCGAGCGTCAA................................. 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................CTCGAAATCTTTGGATTT................................................................................................................................................................................................................................................................. 18 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

TGTTCTACTGCTCTAGCTGGATGTAAACCCGCGACCGGCGGACGGACTAGCATTCACAAGTTCGAGCTTTAGAATCCTAATTAGGGTTCTTTTGGTTCAGAAAGTTAAGACCGACGAAAGCAAACACGGTACATTTAGCATGTACTTTTCGTTGAACTGAAAGGAAATTTAATGAACTTTGCTTTAGTTCGATAGATAGCTAGAATCTGTTTTCTAGTAAAAGCTAGAATTCTTTACCATATACAGCTAGGTTAAGATTAGGTAAAAGGGGTGGAATAAATGAAAATCCGGACACGCTCGCGGTTGATGCCGTCAAGGGTCCCGATACCTGGGCTCAG
**********************************************************************************************************************************************************************************.((.((.((((((....(((((.((....)).)))))...)))))).)).))..********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR553487
NRT_0-2 hours eggs
........................................................................................................................................................................................................................................................................................................GTCGCGGTTGATGCCATC........................ 18 2 1 1.00 1 0 1 0 0 0 0 0
........................................................................................................................................................................................TAGTTCGGTAGGTAGCTAGAAT.................................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
...TCTACTGCTCTAGCTGGATGTA......................................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0
.................................................................................................................................................TTTTCGTTGAACTGAAAGGAA............................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................ACACACTCGCGGCTGGTGCCG.......................... 21 3 1 1.00 1 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................................................TAGGTTAAGATTAGGT........................................................................... 16 0 2 0.50 1 1 0 0 0 0 0 0
....CTACTGCTCTAGCTTG.............................................................................................................................................................................................................................................................................................................................. 16 1 3 0.33 1 0 0 0 0 1 0 0
..................................................................................................................................ACCTTTAGCATGTGCTTTTCT........................................................................................................................................................................................... 21 3 8 0.13 1 0 0 0 0 0 1 0
...............................................................................................................................................................................................ATAGAGAGCTGGAATCCGT................................................................................................................................ 19 3 11 0.09 1 1 0 0 0 0 0 0
..TTCTACTGCCCTAGC................................................................................................................................................................................................................................................................................................................................. 15 1 11 0.09 1 0 0 0 0 1 0 0
.........................................................................................................................................................................................................AGGATGTGTTTTCTAGT........................................................................................................................ 17 2 13 0.08 1 0 0 0 0 0 0 1
................................................................AGCGTTGGAATCCTA................................................................................................................................................................................................................................................................... 15 2 20 0.05 1 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:7946447-7946784 + dsi_28822 ACAAGATGACGAGATCGACCTACATTTGGGCGCTGGCCGCCTGCCTGATCGTAAGTGTTCAAG------------------------CTCGAAATCTTAGGAT--------TAATCCCAAGAAAACCAAGTCTTTCAATTC---TG------------------------------------GCTGCTTTCGTTTGTGCCATGTAAATCGTACATGAAAAGCAACTTGACTTTCCTTTAAATTACT----------------------------------------------------T--GAAACGAAATC-A-----------------AGCT---ATCTATCGATCTTAGACAAAAGATCATTTTCGATCTTAA--------------------GA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT--------------------------------------------GGTATATGTCGATCC------AATTC--TAATCCATTTTCC-----CCACCTTA-TT--TACTTTTAGGCCTGTGCGAGCGCCAAC------TACG---GCAGTTCCCAGGGCTATGG---ACCCG-AG-------------------TC
droSec2 scaffold_35:224798-225135 + ACAAGATGACGAGATCGACCTACATTTGGGCGCTGGCCGCCTGCCTGATCGTAAGTGTTCAAG------------------------CTCGAAATCTTAGGAT--------TAATCCCAAGAAAGCCAAGCCTTTCTATTC---TG------------------------------------GCTGCTTTCGTTTGTGCCATGTAAATCGTACATGAAAAGCAACTAGACTTTCCTTTAAATTACT----------------------------------------------------T--GGAACGGAATC-A-----------------AGCT---ATCTATCGATCTTAGACAAAAGATCATTATGGATCTTAA--------------------AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT--------------------------------------------TGTATATGTCGATCC------AATTC--TAATCCATTTTCC-----CCCCCTTA-TT--TACTTTTAGGCCTGTGCGAGCGCCAAC------TACG---GCAGTTCCCAGGGCTACGG---ACCCG-AG-------------------TC
dm3 chrX:8375942-8376267 + ACAAGATGACGAGATCGACCTACATTTGGGCGCTGGCCGCCTGCCTGATCGTAAGTGTTCAAG------------------------CTCGAAATCTTAGGAT--------TAATCCCAAGAAAACCAAGTCTATCAATTC---TG------------------------------------ACTGCTTTCGTTTGTGCCATGTAAATCGTACATGAAAAGCAAATTGACTTTCCTTTAAATTACT----------------------------------------------------T--GAAACGGAATC-A-----------------AGCT---ATCTATCGATGCTAGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------TATTTTAAGTATATGTATATGTCGATCC------AATTC--TAATCCACCCCCC-----CCCCCTCAATT--TACTTTTAGGCCTGTGCAAGCGCCAAC------TACG---GCAGTTCCCAGGGCTATGG---ACCCG-AG-------------------TC
droEre2 scaffold_4690:6736118-6736456 - TCAAGATGACGAGATCGACCTACATTTGGGCGCTGGCCGCCTGCCTGATCGTAAGTTTTAA-G---------------------CTGCTCGAAATCTTAGGAT--------TAATCCCA-GACAACGAACTGT-TCCATTC---TG------------GA---------ACTCTACAAGTTGGCTGCTTTCGTT-GTCCCATGTAAATCGTAC-----------------TTCCAATTTATTTACT----------------------------------------------------T--GATATAGACTCCC-----------------AGCT---ATAT---GATCTCAAACATCAGCTCACTATAGCACTTGA--------------------ATACCTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGATTAG-----------------------------------------------------------------------------CG------AATTC--TAACCCGTTTCCTCATTTCTCCCTCA-TTTGTTATTTTAGGCCTGTGCGAGCGCCAAC------TACG---GCAGTTCCCAGGGCTATGG---ACCCG-AG-------------------TC
droYak3 X:12938025-12938338 - ACAAGATGACGAGATCGACCTACATTTGGGCGCTGGCCGCCTGCCTGATCGTAAGTGTTACAG------------------------CACCAAATCTTAGGATCTCAATCATAATCCCA-GACAACGAAGTTT-TCCATAC---TG------------GA---------ACTCTACAAGTTGCCTGCTTTGGTT---------------GCACATGACAAATAGCTTGACTTCCCATTTACTCACT----------------------------------------------------T--GAATTGGAATC-A-----------------AGCT---ATAC--AAATCTTAGACATCAGCAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGATTC------AATTC--TGACCAACTTTT-------CCCCTTAATT--CCGTTTTAGGCCTGTGCGAGCGCCAAC------TACG---GCAGTTCCCAGAGCTATGG---ACCCG-AG-------------------TC
droBia1 scf7180000302421:626209-626611 - ACAAGATGACGAGATCGACCTACATTTGGGCGCTGGCCGCCTGCCTGATCGTAAGTGTTAACG------------------------CTCGAAATCTTAGGAT--------TATTTCAAGAAGGGTTCAGTTTGTCAACTCATCTGTCCCAATCTGCGGATTACCTCCAGATTCACGAA-GT---------------------------------------------------------ATTTTTTTTAAAGAACAATCTTTTCCTGGTTTGCAAAGCTTCTTTTCCCCATTCCCTGTTGCAAATCGAAATC-ATTTAAATGTTATTA-------------TTCTTTCCTAAG--ACCAG-T---------------------------------------------------------------------CACTA-------------------------------------------------------AAGTTCTAAA----------CT-----------------------------------GCTCCC---ATAAATTCGATTCCATT----------------------C-CCTAAATATTTGTTT----AAATAAT-----------------------------------------------------------------------------TG------CCCACT-TAACCCATTGTT-------CGCCTT------ATTTTTCAGGCCTGTGCGAGCGCCAAC------TACG---GCGGTTCCCAGGGCTATGG---ACCCG-AA-------------------TC
droEle1 scf7180000490625:2122-2213 - ACAAGATGACGAGATCGACCTACATTTGGGCGCTAGCCGCCTGCCTCATCGTAAGTGTTAACG------------------------CTCGAAATCTTAGGAT--------TATACTCAGAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000763263:494-494 + C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302291:23947-24374 + ACAAGATGACAAGATCGACCTACATTTGGGCGCTAGCCGCCTGCCTGATCGTAAGTGTTTG-------------------------------ATTCGGAGGAT--------TGAATCCGTGAGGTCTCAGAC-------TC---AG------------GG---------AATTCACAGA-GGACTGGCTTGGA-------------------------------------------------------------------------------CCAAACATCTGTCCGCTTTTCACT--T--GA---------------------------------------------CAAAA--ACCAA-T---ATTCAATATTGTAATATATTATATATTACGATATACTTCAGAGTATTTAGGAAAAAGAAAACAGTTCTCTA-------------------------------------------------------AAGTTCTTAAAATATATACACCGATTGGAATTGTTCAATTCGAACAATATAACATACAATCCC---AGAAAGCAGATGCAAAT---------------------------AGGA-----------------------------------------------------------------TTTATATTACTCTGAC-CCCGCAATCTACTAAACT--------------TCTGTTTGCT---------CTCTGTT--CCTTTGCAGGCCTGTGCGAGCGCCAAT------TATG---GCGGACCCCAGGGCTACGGCGGACCCG-TG-------------------TC
droAna3 scaffold_13248:2537983-2538321 - -CAAGATGACAAGATCGAGCTACATTTGGGCGTTGGCCGCCTGCCTGATCGTAAGTATATA--TATTAA--TATATAGCTTATGG------------------------------------------------------------------------------------------------------------------------------------------AGTTGCCTTTCCTTTGATTTTCTTCTAAAAAGAGTCTAATCTTATTTTGAAAATAAT----------------------AATAGAA--G-ATCTAAATGACACTAGATGGCTAAAATATATCAACCAAAGACAAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------GAATCTAAAATAGAAAAGA--------------------TACTAAATTAACCGAGAAATAAATTTAAAAAAATCAC-----------------------------------------------------------------------------TG------AAAAC--TCACCCATTCCCT-----CTGCC----AT--CTCTTCCAGGCATGTGCCAGCGCGAAC------TACG---GCGGTAACCAGGGCTACGGCGGACCAG-TG-------------------TC
droBip1 scf7180000394730:1666-2060 - -CAAGATGACAAGATCGAGCTACATTTGGGCTTTGGCCGCCTGCCTGATCGTAAGTATATA--TATACATCTATATAGCTTATGGAGTTGGATTTCCTTTGAT--------TTCCT----------CAAGACAGTCTACCC---CG------------------------------------ATAGACTCCGAGAATGACTTGAAAATTATTAAAGATCTAAAGATTGA----------AAGAATTTGA-----------------------------------------------------------------------------------------------------AAGATAAAAGATCTCT---------------------------------------------------------------------AAGTTTAAACAAAGCATTCAAGACTTAAAAATATTTAAAAATTAAATCTAAATCTTAAATC----------------T-----------------------------------AAATCTGAAATGGAAAAAA--------------------TGAAAAATTAGCAAAGGAATACTTTTAG--AAA--------------------------------------------------------------------------------TCA------AAGAC--TCACCCATTTCCT-----TTGCC--------ATCTTCCAGGCGTGTGCCAGCGCGAAC------TACG---GCGGTAACCAGGGCTACGGCGGACCAG-TG-------------------TC
dp5 XL_group1e:3437167-3437222 + AAAAGATGACAAGACAGAGCTACATTTGGGCTCTGGCCGCCTGCCTCATCGTACGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_17:374148-374203 + AAAAGATGACAAGACAGAGCTACATTTGGGCTCTGGCCGCCTGCCTCATCGTACGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004515:1101690-1101957 + GGAGCATGACAAGATCGACATATATATGGGCGCTAGCCGCCTGCCTGATTGTACGTACCCCAA------------------------AACCAAATCAAAAGAA--------AAGATTCCAAACGAACAAA----------------------------------CA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACCAAAGACTA---------------------------------------------------------------------------------------------------------------------------------------------AAA----------CC-----------------------------------G------AAAT-----------CATTAACAAAAGTCAGATGA---------------------------------ACGAATCGCATCGCAATGGAT--------------------------------------------TGTG--------CCT------CATAC--TCATCAATATAT------TTCACTTA-TTTTTCATTGCAGGCATGTGCCGCAGCCAATGGCGGCTATGGTAGCGGTCCTCAGGGCTATGG----CCCG-GG-------------------TC
droVir3 scaffold_12970:11016880-11017174 - dvi_13969 AAACGATGAACAGACACAGCTTCATTTGGGCGCTAGCCGCCTGCTTAATTGTACGTAAATA--------------------------------------------------------------------------------ATACGGCCAGATCTGTGGCTAGTCGCCAG----------------------------------------TCGATGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAC----------CC-----------------------------------G------CAGT-----------C------GCAGCACATCTGA---------------------------------GCGAATCTCAACTAAATTCAACGCACAACTTCATTTGCCTTTCTCTCTTTCTTTCTCTCTCTCTCTCTCTCTCTTTTTCTCTTTCTCTCGCTCTCTCCCTTTCTC-------CGT-----TT--CTCTATCAGGCATGCGCCAGCGCTAAC---GGCTACG---GCGGACAACAGGGCTACAG---CTCTGGCG-------------------GC
droMoj3 scaffold_6473:10330507-10330616 + TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--TGCTTCTTTCTCT-----TTCTCTAA-TTCTCTCTCGTAGGCATGTGCCAGCGCTAGC---AGCTACG---GCGTACAACCGAGCTACGG---CTCTGGCGGCAACCAGGAGTCATACGGCC
droGri2 scaffold_15203:3011768-3011828 - ATACGATGAACAGACACAGCTTCATATGGGCGCTAGCCGCCTGCTTAATTGTACGTAACCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACAAGATGACGAGATCGACCTACATTTGGGCGCTGGCCGCCTGCCTGATCGTAAGTGTTCAAG------------------------CTCGAAATCTTAGGAT--------TAATCCCAAGAAAACCAAGTCTTTCAATTC---TG------------------------------------GCTGCTTTCGTTTGTGCCATGTAAATCGTACATGAAAAGCAACTTGACTTTCCTTTAAATTACT----------------------------------------------------T--GAAACGAAATC-A-----------------AGCT---ATCTATCGATCTTAGACAAAAGATCATTTTCGATCTTAA--------------------GA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT--------------------------------------------GGTATATGTCGATCC------AATTC--TAATCCATTTTCC-----CCACCTTA-TT--TACTTTTAGGCCTGTGCGAGCGCCAAC------TACG---GCAGTTCCCAGGGCTATGG---ACCCG-AG-------------------TCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....GATGACGAGATCGACCTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.00400000000004000000
..................................................................................................................................................................................................................TACATGAAAAGCAACTTGACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000000002000000
..AAGATGACGAGATCGACCTACATTTGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
..........................................................................................................................................TTC---TG------------------------------------GCTGCTTTCGTTTGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCCCAGGGCTATGG---A............................1811.00100000000001000000
..................................GGCCGCCTGCCTGATCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000001000000000
..................................GGCCGCCTGCCTGATCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGTGCGAGCGCCAAC------TACG---...................................................2211.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGTGCGAGCGCCAA.................................................................1711.00100000000001000000
....GATGACGAGATCGACCTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
.................ACCTACATTTGGGCGCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGAGCGCCAAC------TACG---GCA................................................2111.00100000000001000000
.......GACGAGATCGACCTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000001000000000
..................................GGCCGCCTGCCTGATCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACG---GCAGTTCCCAGGGC.....................................1711.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCCAAC------TACG---GCAGTTCCCAGGGA.....................................2711.00100000010000000000
...AGATGACGAGATCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000001000000000
..AAGATGACGAGATCGACCTACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGGCCTGTGCGAGCGCCA..................................................................2111.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCC-----CCACCTTA-TT--TACTTTTAG..................................................................................2611.00100000000000010000
....GATGACGAGATCGACCTACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
..................................................................................................................................................................................................................TACATGAAAAGCAACTTGACTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTTCCCAGGGCTATG.................................1811.00100000000001000000
........................................................................................................................................................................................TGCTTTCGTTTGTGCCAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
.........CGAGATCGACCTACATTTGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
ACAAGATGACGAGATCGACCTACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
......TGACGAGATCGACCTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
...............................................................................................................................AAGTCTTTCAATTC---TG------------------------------------GCTGCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
.........................................................................................................................................ATTC---TG------------------------------------GCTGCTTTCGTTTGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
.....................................CGCCTGCCTGATCGTAAGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
ACAAGATGACGAGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000000001000000
droSec2
ACAAGATGACGAGATCGACCTACATTTGGGCGCTGGCCGCCTGCCTGATCGTAAGTGTTCAAG------------------------CTCGAAATCTTAGGAT--------TAATCCCAAGAAAGCCAAGCCTTTCTATTC---TG------------------------------------GCTGCTTTCGTTTGTGCCATGTAAATCGTACATGAAAAGCAACTAGACTTTCCTTTAAATTACT----------------------------------------------------T--GGAACGGAATC-A-----------------AGCT---ATCTATCGATCTTAGACAAAAGATCATTATGGATCTTAA--------------------AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT--------------------------------------------TGTATATGTCGATCC------AATTC--TAATCCATTTTCC-----CCCCCTTA-TT--TACTTTTAGGCCTGTGCGAGCGCCAAC------TACG---GCAGTTCCCAGGGCTACGG---ACCCG-AG-------------------TCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................TACATGAAAAGCAACTAGACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
....................................................................................................................................................................................................................................................................................................................AATC-A-----------------AGCT---ATCTATCGATCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.........................................................................................................................................ATTC---TG------------------------------------GCTGCTTTCGTTTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
dm3
ACAAGATGACGAGATCGACCTACATTTGGGCGCTGGCCGCCTGCCTGATCGTAAGTGTTCAAG------------------------CTCGAAATCTTAGGAT--------TAATCCCAAGAAAACCAAGTCTATCAATTC---TG------------------------------------ACTGCTTTCGTTTGTGCCATGTAAATCGTACATGAAAAGCAAATTGACTTTCCTTTAAATTACT----------------------------------------------------T--GAAACGGAATC-A-----------------AGCT---ATCTATCGATGCTAGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------TATTTTAAGTATATGTATATGTCGATCC------AATTC--TAATCCACCCCCC-----CCCCCTCAATT--TACTTTTAGGCCTGTGCAAGCGCCAAC------TACG---GCAGTTCCCAGGGCTATGG---ACCCG-AG-------------------TCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCCCAGGGCTATGG---AC...........................20170.00700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050210000000000000000000000000000000000000000000000000000000000001968181100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.........................TTGGGCGCTGGCCGCCTGCCTGATCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27119.001900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016
..........................TGGGCGCTGGCCGCCTGCCTGATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24118.001800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018
.........CGAGATCGACCTACATTTGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006600112000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCCCAGGGCTATGG---ACCC.........................22116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020012000000000000000000000000000000000000000000000000000000000002042200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGCCAAC------TACG---GCAGTTCCC..........................................23115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000059100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...........................GGGCGCTGGCCGCCTGCCTGATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23114.001400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---GCAGTTCCCAGGGCTATGG---ACC..........................23112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012000000000000000000000000000000000000000000000000000000000003011200000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTTCCCAGGGCTATGG---AC...........................21111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010110000000000000000000000000000000000000000000000000000000000001310300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............................GCTGGCCGCCTGCCTGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18110.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACG---GCAGTTCCCAGGGCT....................................19110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---GCAGTTCCCAGGGCTATGG---AC...........................2219.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCC-----CCCCCTCAATT--TACTTTTAG..................................................................................2319.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GCCTGCCTGATCGTAAGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2019.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000100000000400000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCCCAGGGCTATGG---ACCCG-A......................2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCCCAGGGCTATGG---AC...........................1918.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000212000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GCGCTGGCCGCCTGCCTGATCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2217.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007
...AGATGACGAGATCGACCTAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCTCAATT--TACTTTTAG..................................................................................2016.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----CCCCCTCAATT--TACTTTTAG..................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000030000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CCTGCCTGATCGTAAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1816.0060000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000100000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......GACGAGATCGACCTACATTTGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000
.........CGAGATCGACCTACATTTGGGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC-----CCCCCTCAATT--TACTTTT....................................................................................2015.0050000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CGAGATCGACCTACATTTGGGCGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................GCTGGCCGCCTGCCTGATCGCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---GCAGTTCCCAGGGCTATGG---A............................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CGAGATCGACCTACATTTGGGCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...AGATGACGAGATCGACCTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC-----CCCCCTCAATT--TACTTTTA...................................................................................2115.0050000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................ACT----------------------------------------------------T--GAAACGGAATC-A-----------------AGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000
.......GACGAGATCGACCTACATTTGGGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACG---GCAGTTCCCAGGGCTATG.................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CGAGATCGACCTACATTTGGGCGCTGGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----CCCCCTCAATT--TACTTTTA...................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000002020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CGCTGGCCGCCTGCCTGATCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CCTGCCTGATCGTAAGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACG---GCAGTTCCCAGGGCTATG.................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GACGAGATCGACCTACATTTGGGCGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
..............................CGCTGGCCGCCTGCCTGATCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC-----CCCCCTCAATT--TACTTTTAG..................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATTTGGGCGCTGGCCGCCTGCCTGATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GCCTGCCTGATCGTAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTTCCCAGGGCTATGG---A............................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GCTGGCCGCCTGCCTGATCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
ACAAGATGACGAGATCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCCAGGGCTATGG---ACCC.........................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.............................................................................................................................................................................................................AATCGTACATGAAAAGCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACG---GCAGTTCCCAGGGCTATGG---A............................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------TACG---GCAGTTCCCAGGGCT....................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000
.............ATCGACCTACATTTGGGCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TACATTTGGGCGCTGGCCGCCTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droEre2
TCAAGATGACGAGATCGACCTACATTTGGGCGCTGGCCGCCTGCCTGATCGTAAGTTTTAA-G---------------------CTGCTCGAAATCTTAGGAT--------TAATCCCA-GACAACGAACTGT-TCCATTC---TG------------GA---------ACTCTACAAGTTGGCTGCTTTCGTT-GTCCCATGTAAATCGTAC-----------------TTCCAATTTATTTACT----------------------------------------------------T--GATATAGACTCCC-----------------AGCT---ATAT---GATCTCAAACATCAGCTCACTATAGCACTTGA--------------------ATACCTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGATTAG-----------------------------------------------------------------------------CG------AATTC--TAACCCGTTTCCTCATTTCTCCCTCA-TTTGTTATTTTAGGCCTGTGCGAGCGCCAAC------TACG---GCAGTTCCCAGGGCTATGG---ACCCG-AG-------------------TCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................ATTTGGGCGCTGGCCGCCTGCCTGATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27127.002700000027
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACG---GCAGTTCCCAGGGCTATGG---AC...........................25113.001300000013
.......................ATTTGGGCGCTGGCCGCCTGCCTGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2619.0090000009
..........................................................................................................................................................................CTCTACAAGTTGGCTGCTTTCGTT-GTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2917.0070000007
......................................GCCTGCCTGATCGTAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
droYak3
ACAAGATGACGAGATCGACCTACATTTGGGCGCTGGCCGCCTGCCTGATCGTAAGTGTTACAG------------------------CACCAAATCTTAGGATCTCAATCATAATCCCA-GACAACGAAGTTT-TCCATAC---TG------------GA---------ACTCTACAAGTTGCCTGCTTTGGTT---------------GCACATGACAAATAGCTTGACTTCCCATTTACTCACT----------------------------------------------------T--GAATTGGAATC-A-----------------AGCT---ATAC--AAATCTTAGACATCAGCAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGATTC------AATTC--TGACCAACTTTT-------CCCCTTAATT--CCGTTTTAGGCCTGTGCGAGCGCCAAC------TACG---GCAGTTCCCAGAGCTATGG---ACCCG-AG-------------------TCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------TACG---GCAGTTCCCAGAGCTATGG---AC...........................28118.0018000000000018
......TGACGAGATCGACCTACATTTGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25111.0011000000000011
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCGCCAAC------TACG---GCAGTTCCCAGAGCT....................................30110.0010000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGCGCCAAC------TACG---GCAGTTCCCAGAGC.....................................3016.00600000000006
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCAAC------TACG---GCAGTTCCCAGA.......................................2415.00500000000005
.........CGAGATCGACCTACATTTGGGCGCTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2715.00500000000005
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC------TACG---GCAGTTCCCAGAGCTATG.................................2615.00500000000005
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---GCAGTTCCCAGAGCTATGG---ACCCG-AG-------------------TC2913.00300000000003
.......GACGAGATCGACCTACATTTGGGCGCTGGCCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3311.00100000000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------TACG---GCAGTTCCCAGAGCTAT..................................2411.00100000000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------TACG---GCAGTTCCC..........................................1611.00100000000001
droBia1
ACAAGATGACGAGATCGACCTACATTTGGGCGCTGGCCGCCTGCCTGATCGTAAGTGTTAACG------------------------CTCGAAATCTTAGGAT--------TATTTCAAGAAGGGTTCAGTTTGTCAACTCATCTGTCCCAATCTGCGGATTACCTCCAGATTCACGAA-GT---------------------------------------------------------ATTTTTTTTAAAGAACAATCTTTTCCTGGTTTGCAAAGCTTCTTTTCCCCATTCCCTGTTGCAAATCGAAATC-ATTTAAATGTTATTA-------------TTCTTTCCTAAG--ACCAG-T---------------------------------------------------------------------CACTA-------------------------------------------------------AAGTTCTAAA----------CT-----------------------------------GCTCCC---ATAAATTCGATTCCATT----------------------C-CCTAAATATTTGTTT----AAATAAT-----------------------------------------------------------------------------TG------CCCACT-TAACCCATTGTT-------CGCCTT------ATTTTTCAGGCCTGTGCGAGCGCCAAC------TACG---GCGGTTCCCAGGGCTATGG---ACCCG-AA-------------------TCSizeHit CountTotal NormTotal
No Reads
droEle1
ACAAGATGACGAGATCGACCTACATTTGGGCGCTAGCCGCCTGCCTCATCGTAAGTGTTAACG------------------------CTCGAAATCTTAGGAT--------TATACTCAGAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
ACAAGATGACAAGATCGACCTACATTTGGGCGCTAGCCGCCTGCCTGATCGTAAGTGTTTG-------------------------------ATTCGGAGGAT--------TGAATCCGTGAGGTCTCAGAC-------TC---AG------------GG---------AATTCACAGA-GGACTGGCTTGGA-------------------------------------------------------------------------------CCAAACATCTGTCCGCTTTTCACT--T--GA---------------------------------------------CAAAA--ACCAA-T---ATTCAATATTGTAATATATTATATATTACGATATACTTCAGAGTATTTAGGAAAAAGAAAACAGTTCTCTA-------------------------------------------------------AAGTTCTTAAAATATATACACCGATTGGAATTGTTCAATTCGAACAATATAACATACAATCCC---AGAAAGCAGATGCAAAT---------------------------AGGA-----------------------------------------------------------------TTTATATTACTCTGAC-CCCGCAATCTACTAAACT--------------TCTGTTTGCT---------CTCTGTT--CCTTTGCAGGCCTGTGCGAGCGCCAAT------TATG---GCGGACCCCAGGGCTACGGCGGACCCG-TG-------------------TCSizeHit CountTotal NormTotal
No Reads
droAna3
-CAAGATGACAAGATCGAGCTACATTTGGGCGTTGGCCGCCTGCCTGATCGTAAGTATATA--TATTAA--TATATAGCTTATGG------------------------------------------------------------------------------------------------------------------------------------------AGTTGCCTTTCCTTTGATTTTCTTCTAAAAAGAGTCTAATCTTATTTTGAAAATAAT----------------------AATAGAA--G-ATCTAAATGACACTAGATGGCTAAAATATATCAACCAAAGACAAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------GAATCTAAAATAGAAAAGA--------------------TACTAAATTAACCGAGAAATAAATTTAAAAAAATCAC-----------------------------------------------------------------------------TG------AAAAC--TCACCCATTCCCT-----CTGCC----AT--CTCTTCCAGGCATGTGCCAGCGCGAAC------TACG---GCGGTAACCAGGGCTACGGCGGACCAG-TG-------------------TCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................A--TATTAA--TATATAGCTTATGG------------------------------------------------------------------------------------------------------------------------------------------AGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..........................................................ATA--TATTAA--TATATAGCTTATGG------------------------------------------------------------------------------------------------------------------------------------------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...............................................................................................................................................................................................................................................................................................................................ATGACACTAGATGGCTAAAATATATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...........................................................................................................................................................................................................................................................................................................................CTAAATGACACTAGATGGCTAAAATAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAC------TACG---GCGGTAACCAG........................................1911.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAATCAC-----------------------------------------------------------------------------TG------AAAAC--..........................................................................................................................1820.501010000
droBip1
-CAAGATGACAAGATCGAGCTACATTTGGGCTTTGGCCGCCTGCCTGATCGTAAGTATATA--TATACATCTATATAGCTTATGGAGTTGGATTTCCTTTGAT--------TTCCT----------CAAGACAGTCTACCC---CG------------------------------------ATAGACTCCGAGAATGACTTGAAAATTATTAAAGATCTAAAGATTGA----------AAGAATTTGA-----------------------------------------------------------------------------------------------------AAGATAAAAGATCTCT---------------------------------------------------------------------AAGTTTAAACAAAGCATTCAAGACTTAAAAATATTTAAAAATTAAATCTAAATCTTAAATC----------------T-----------------------------------AAATCTGAAATGGAAAAAA--------------------TGAAAAATTAGCAAAGGAATACTTTTAG--AAA--------------------------------------------------------------------------------TCA------AAGAC--TCACCCATTTCCT-----TTGCC--------ATCTTCCAGGCGTGTGCCAGCGCGAAC------TACG---GCGGTAACCAGGGCTACGGCGGACCAG-TG-------------------TCSizeHit CountTotal NormTotal
No Reads
dp5
AAAAGATGACAAGACAGAGCTACATTTGGGCTCTGGCCGCCTGCCTCATCGTACGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....GATGACAAGACAGAGCTACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
AAAAGATGACAAGACAGAGCTACATTTGGGCTCTGGCCGCCTGCCTCATCGTACGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
GGAGCATGACAAGATCGACATATATATGGGCGCTAGCCGCCTGCCTGATTGTACGTACCCCAA------------------------AACCAAATCAAAAGAA--------AAGATTCCAAACGAACAAA----------------------------------CA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACCAAAGACTA---------------------------------------------------------------------------------------------------------------------------------------------AAA----------CC-----------------------------------G------AAAT-----------CATTAACAAAAGTCAGATGA---------------------------------ACGAATCGCATCGCAATGGAT--------------------------------------------TGTG--------CCT------CATAC--TCATCAATATAT------TTCACTTA-TTTTTCATTGCAGGCATGTGCCGCAGCCAATGGCGGCTATGGTAGCGGTCCTCAGGGCTATGG----CCCG-GG-------------------TCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTATGGTAGCGGTCCTCAGG.......................................2212.00202000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTAGCGGTCCTCAGGGCTATG.................................2411.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAATGGCGGCTATGGTAGCG................................................2311.00101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTA-TTTTTCATTGCAG..................................................................................1911.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGTAGCGGTCCTCAGG.......................................1911.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGGTAGCGGTCCTCAGGG......................................2111.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCGGCTATGGTAGCG................................................1911.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT------TTCACTTA-TTTTTCATTGCAG..................................................................................2411.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTATGGTAGCGGTCCTCAGGG......................................2311.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCGCATCGCAATGGAT--------------------------------------------TGTG--------CC........................................................................................................................................2511.00101000
droVir3
AAACGATGAACAGACACAGCTTCATTTGGGCGCTAGCCGCCTGCTTAATTGTACGTAAATA--------------------------------------------------------------------------------ATACGGCCAGATCTGTGGCTAGTCGCCAG----------------------------------------TCGATGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAC----------CC-----------------------------------G------CAGT-----------C------GCAGCACATCTGA---------------------------------GCGAATCTCAACTAAATTCAACGCACAACTTCATTTGCCTTTCTCTCTTTCTTTCTCTCTCTCTCTCTCTCTCTTTTTCTCTTTCTCTCGCTCTCTCCCTTTCTC-------CGT-----TT--CTCTATCAGGCATGCGCCAGCGCTAAC---GGCTACG---GCGGACAACAGGGCTACAG---CTCTGGCG-------------------GCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................ATTTGGGCGCTAGCCGCCTGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2215.005000000000000000000000000001000000000000000000000000000000000004
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTAAC---GGCTACG---GCGGA..............................................1914.004000000000030000000000000000100000000000000000000000000000000000
.......GAACAGACACAGCTTCATTTGGGCGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.004000000001002000000000000000100000000000000000000000000000000000
.......................ATTTGGGCGCTAGCCGCCTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000003
........................................................................................................................................................................AG----------------------------------------TCGATGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAC----------CC-----------------------------------G------CAGT-----------C------GCAG.................................................................................................................................................................................................................................................................2513.003000000000000000000000000000000000000000000000000000000000000003
......................CATTTGGGCGCTAGCCGCCTGCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.003000000000000000000000000000100000000000000000000000000000000002
..........................................................ATA--------------------------------------------------------------------------------ATACGGCCAGATCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003000000101000000000000000000000000000001000000000000000000000000
.........................................................................................................................................................................G----------------------------------------TCGATGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAC----------CC-----------------------------------G------CAGT-----------............................................................................................................................................................................................................................................................................1912.002000000000000000000000000000000000001000000000000000000000000001
....................TTCATTTGGGCGCTAGCCGCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000002
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACG---GCGGACAACAGGGCT....................................2012.002000000002000000000000000000000000000000000000000000000000000000
...CGATGAACAGACACAGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000001010000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGCCAGCGCTAAC---GGCTAC.......................................................2212.002000000000000000000000000000000000000000000000000000000000000002
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACG---GCGGACAACAGGGC.....................................1811.001000000010000000000000000000000000000000000000000000000000000000
.........................TTGGGCGCTAGCCGCCTGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000001
...............ACAGCTTCATTTGGGCGCTAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................................................................GCCAG----------------------------------------TCGATGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAC----------CC-----------------------------------G------...........................................................................................................................................................................................................................................................................................1911.001000000001000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAC---GGCTACG---GCGGACAAC..........................................2011.001000000000000000000000000000000000000001000000000000000000000000
.........................TTGGGCGCTAGCCGCCTGCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000001
.............ACACAGCTTCATTTGGGCGCTAGCCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
............GACACAGCTTCATTTGGGCGCTAGCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCCAGCGCTAAC---GGCTACG---...................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.AACGATGAACAGACACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000001000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACG---GCGGACAACAGGGCTACA.................................2311.001000000000000100000000000000000000000000000000000000000000000000
........AACAGACACAGCTTCATTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000001000000000000000000000000
................CAGCTTCATTTGGGCGCTAGCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000001000000000000000000000000000000000000000000000000000000
..................GCTTCATTTGGGCGCTAGCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTCTCTCCCTTTCTC-------CGT-----...............................................................................................2111.001000000000000000000000000000000000000000000000000000000000000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGT-----------C------GCAGCACATCTGA---------------------------------G......................................................................................................................................................................................................................1811.001000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAC---GGCTACG---GCGGAC.............................................1911.001000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACG---GCGGACAACAGGGCTAC..................................2211.001000000001000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAC---GGCTACG---GCGGACAACAGGG......................................2411.001000000000001000000000000000000000000000000000000000000000000000
...................CTTCATTTGGGCGCTAGCCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------CC-----------------------------------G------CAGT-----------C------GCAGCACATCTG.........................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
....GATGAACAGACACAGCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCTAAC---GGCTACG---GCGGA..............................................2011.001000000000010000000000000000000000000000000000000000000000000000
............GACACAGCTTCATTTGGGCGCTAGCCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGCGCCAGCGCTAAC---GG...........................................................2011.001000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAC---GGCTACG---GCGGACAACAG........................................2411.001000000000000000000000000000000100000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAC---GGCTACG---GCGGACAAC..........................................2211.001000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................ATGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAC----------CC-----------------------------------G------CAGT-----------C------GCAGC................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........CAGACACAGCTTCATTTGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000100000
............GACACAGCTTCATTTGGGCGCTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------CC-----------------------------------G------CAGT-----------C------GCAGCACATCTGA---------------------------------G......................................................................................................................................................................................................................2311.001000000001000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAATCTCAACTAAATTCAACG................................................................................................................................................................................................2311.001000000000000000000000000001000000000000000000000000000000000000
........AACAGACACAGCTTCATTTGGGCGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCAGCGCTAAC---GGCTAC.......................................................2011.001000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACG---GCGGACAACAGGGCTACAG---.............................2411.001000000001000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG---GCGGACAACAGGGCTACAG---CTCTGGC......................2811.001000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTAAC---GGCTACG---GCGGG..............................................1911.001000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCTTTCTTTCTCTCTCTC........................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTCTTTCTTTCTCTCTCT.........................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--TGCTTCTTTCTCT-----TTCTCTAA-TTCTCTCTCGTAGGCATGTGCCAGCGCTAGC---AGCTACG---GCGTACAACCGAGCTACGG---CTCTGGCGGCAACCAGGAGTCATACGGCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-----TTCTCTAA-TTCTCTCTCGTAG..................................................................................2311.001100000
droGri2
ATACGATGAACAGACACAGCTTCATATGGGCGCTAGCCGCCTGCTTAATTGTACGTAACCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 09:27 AM