ID:dsi_28808 |
Coordinate:3l:7368867-7368930 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3l_7368642_7368866_+]; CDS [3l_7368642_7368866_+]; CDS [3l_7368931_7369281_+]; exon [3l_7368931_7370122_+]; intron [3l_7368867_7368930_+]
No Repeatable elements found
| ##################################################----------------------------------------------------------------################################################## CCAATGATTGGTTGCCTGTGATAACGCGCGACCTACAGACCCAGTCAGAGGTAGGTTATTCCGTAAAACTTTTCGAATCACACTAAACTATGTCCCAATCTATGTATCCTGCAGCAGAGTAATCGTCCCCAGCCGCCTTTCTCGGACGCCTATATCTCGGGCAT **************************************************(((((.(((............................................))).)))))..************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
M024 male body |
SRR902008 ovaries |
SRR553488 RT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
SRR553487 NRT_0-2 hours eggs |
O001 Testis |
M023 head |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................AGCAGAGTAATCGTCCCCAGCCGCCC.......................... | 26 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................................................................GGATGCCTATATCTCGGG... | 18 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................AACGCGCGACCTACAGACC........................................................................................................................... | 19 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................TGTGATAACGCGCGA..................................................................................................................................... | 15 | 0 | 2 | 0.50 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ................TGTGATACCGCGAGACCCACA............................................................................................................................... | 21 | 3 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................................................GTCCCAACATATGTATCC....................................................... | 18 | 2 | 5 | 0.20 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ..................................................................AACTTTTCGAATCGC................................................................................... | 15 | 1 | 20 | 0.20 | 4 | 0 | 0 | 0 | 2 | 0 | 1 | 0 | 0 | 1 |
| .............................................................CGTGGAACTTTTCGAATC..................................................................................... | 18 | 2 | 8 | 0.13 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ......................................ACTCAGTCGGAGGTAGG............................................................................................................. | 17 | 2 | 8 | 0.13 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ......................AGCGCGCGACCTACAC.............................................................................................................................. | 16 | 2 | 16 | 0.06 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................................................AACTTTTCGAATCGCA.................................................................................. | 16 | 1 | 18 | 0.06 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ......................................ACTCAGTCGGAGGTAG.............................................................................................................. | 16 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................ATAACTTTTCGAATC..................................................................................... | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
|
GGTTACTAACCAACGGACACTATTGCGCGCTGGATGTCTGGGTCAGTCTCCATCCAATAAGGCATTTTGAAAAGCTTAGTGTGATTTGATACAGGGTTAGATACATAGGACGTCGTCTCATTAGCAGGGGTCGGCGGAAAGAGCCTGCGGATATAGAGCCCGTA
**************************************************(((((.(((............................................))).)))))..************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M025 embryo |
SRR553486 Makindu_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................TCTCGTCTCATTAGCAGGGGTCGG.............................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..........AAACGGACACTAGTGCGGGCT..................................................................................................................................... | 21 | 3 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 |
| .............................................................................AGGGTGAATTGATACAG...................................................................... | 17 | 2 | 9 | 0.11 | 1 | 0 | 0 | 1 | 0 |
| ...........................................................................................................GGAAGTCGTCTCAATAG........................................ | 17 | 2 | 13 | 0.08 | 1 | 0 | 0 | 1 | 0 |
| .........................CGTGCTCGATGTCTGGG.......................................................................................................................... | 17 | 2 | 16 | 0.06 | 1 | 0 | 0 | 1 | 0 |
| ....................................................TCCGATAAGGCATCTT................................................................................................ | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 |
Generated: 04/24/2015 at 06:23 AM