ID:

dsi_28779

 Coordinate:

3r:12314084-12314233 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.8 -16.7 -16.6 -16.5

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
(ATG)nSimple_repeatSimple_repeat+

Sense Strand Reads

GATATATACTCGTACACTACTCTGTTGTTGTGGTTGTCGTCGTGTGCGTGGTTCTCCCAGCTCAATAGTCCGTGTTTGTTGCTAGTTAGTCGTAGTTGAGTGTTTTGGCTAGGCTAGGGGGGCTTCTGCTCATCATCATCATTATCATCATCTCGAGCGCGCTGTACCGAGTTGCTAATCCTTGACCATCTTGCTTTTAGCCTCTGAGTGCGCCCGACCCTAATAATCATCTGTCATCGAGCATAAAAAC
***********************************************************************************************.((......(((((...(((.((..(((...(((((.......................))))).)))...)).))).)))))...................))*************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 SRR902009
testis
 M025
embryo
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
...................................................................................................................................................................................................TTTAGCCTCTGAGTGCGCCCG.................................. 21 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CTTTTAGCCTCTGAGTGCGCC.................................... 21 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTTTAGCCTCTGAGTGCGCCC................................... 21 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0
......TACTCGTACACTACTCTGTTG............................................................................................................................................................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GACCCTAATAATCATCTGTCATCGAGC........ 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TTAGCCTCTGAGTGCGCCCG.................................. 20 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................GCTAATCCTTGACCATCTTGCTTTTA................................................... 26 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.ATATATACTCGTACACTACTCT................................................................................................................................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.....................CTGTTGTTGTGGTTGTCGTC................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................CGTAGTTGAGTGTTTTGGCGC........................................................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CTTTTAGCCTCTGAGTGCGAC.................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...ATATACTCGTACACTACTCTG.................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................TTGAGTGTTTTGGCTAGGCTA...................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................CGTAGTTGAGTGTTTTGGCTA........................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................AATCGCCTCTGAGTGCGCCCGACC............................... 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................CCAGCTCAATAGTCCGTGTTC............................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................TTAGCCTCTGAGTGCGCCCGG................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................TCAATAGTCCGTGTTTGTTGCT....................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATAATCATCTGTCATCGAGC........ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................AATCATCTGTCATCG........... 15 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................TTAGCCTCTGAGTGCGCCCGA................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................CATCTCGAGCGCGCTGTACCGA................................................................................ 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...................CTCTGGTGTTCGGGTTGTCGT.................................................................................................................................................................................................................. 21 3 3 0.33 1 0 0 0 0 0 0 0 1 0 0
............................TGTGTTTGTCGTCGTGTGTGT......................................................................................................................................................................................................... 21 2 4 0.25 1 0 0 0 0 0 0 1 0 0 0
...........................................................................................................GCTGGGCTAGGGGGGC............................................................................................................................... 16 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0
.................................................................................................................CTCGGGGGGCTTCTTCTC....................................................................................................................... 18 2 8 0.13 1 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................TCATCATCATTATCATCATC.................................................................................................. 20 0 10 0.10 1 0 0 0 0 0 1 0 0 0 0
......................................................................CGGGTTTGTTGCTAGG.................................................................................................................................................................... 16 2 20 0.10 2 0 0 0 0 0 2 0 0 0 0
..................................................................................................ACTGTTTTGGCTAGG......................................................................................................................................... 15 1 11 0.09 1 0 0 0 0 0 0 0 0 1 0
............................................................................................................CTACGGTAGGGGCGCTTC............................................................................................................................ 18 3 13 0.08 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CGGTCATCGAGCGTAAAG.. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0
..................ACTCTGTTGTTATGGC........................................................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1
.........................................................................................................TGTTTCGGCTAGGGGGGC............................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................TCATCATCATCATTATCA....................................................................................................... 18 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................TTCTGCCCATCATCACCA............................................................................................................. 18 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

CTATATATGAGCATGTGATGAGACAACAACACCAACAGCAGCACACGCACCAAGAGGGTCGAGTTATCAGGCACAAACAACGATCAATCAGCATCAACTCACAAAACCGATCCGATCCCCCCGAAGACGAGTAGTAGTAGTAATAGTAGTAGAGCTCGCGCGACATGGCTCAACGATTAGGAACTGGTAGAACGAAAATCGGAGACTCACGCGGGCTGGGATTATTAGTAGACAGTAGCTCGTATTTTTG
***************************************************.((......(((((...(((.((..(((...(((((.......................))))).)))...)).))).)))))...................))*********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR902009
testis
 M053
female body
 M024
male body		 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR1275487
Male larvae		 SRR1275483
Male prepupae		 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR1275485
Male prepupae
..................................................................................................................................................................................................................GCTGGCAGGGATAATTAGTA.................... 20 3 1 5.00 5 0 1 3 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CTGGGATTATTAGTAGACAGT.............. 21 0 1 4.00 4 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CTCGCGCGACGTGGCTCAACG........................................................................... 21 1 1 3.00 3 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CTGGCAGGGATAATTAGTA.................... 19 3 8 2.38 19 0 1 5 10 0 0 0 0 0 0 2 0 1 0 0
.......................................................................................................................................................................................................................CTGGGATTATTAGTAGACATT.............. 21 1 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
...................................CAGCAGCACACGCACCAAGAGGGTCGA............................................................................................................................................................................................ 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TCGAGTTATCAGGCACAAACAACGATCA.................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AGACTCACGCGGGCTGGGA............................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TTCGCGCGACATGGCTCAACGA.......................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TAGGAACTGGTAGAACGAAAA.................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CTTATTAGTAGACAGGAACTC......... 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CAACCGACAAAACCGATCCAAT...................................................................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................AGTTATCAGGCACAAACAACGAT...................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TAGACAGTAGCTCGTA...... 16 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CTGGGATTGTTAGTAGACAGT.............. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................GACAACAACACCAACAGCAGC................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CGGGGGCTGGGATAATTAG...................... 19 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TGGGATTATTAGTAGACAGTAGCTCGT....... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................TAGTAGAAATAGTAGTAGAGGT.............................................................................................. 22 2 4 0.50 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0
............................................................................................................................AGGCGAGTAGTAGTAGTAGTAGTAGTAG.................................................................................................. 28 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................AGAAGAGTAGTAGTAGTAGTAGTAGT.................................................................................................... 26 2 12 0.42 5 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GGCAGGGATAATTAGTAA................... 18 3 20 0.40 8 1 0 0 0 0 0 0 1 0 0 3 2 0 0 1
...............................................................................................................................CGAGTAGTAGTAGTA............................................................................................................ 15 0 15 0.40 6 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GCTGGCAGGGATAATTAG...................... 18 3 18 0.39 7 0 0 3 1 1 0 0 0 0 0 1 1 0 0 0
............................................................................................................................AGACGAGTAGTAGTAGTAGTAGTAGT.................................................................................................... 26 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................ACCGATCCGATCCAC.................................................................................................................................. 15 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................CGAGTAGTAGTAGTACTA......................................................................................................... 18 1 11 0.18 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GGCAGGGATAATTAGTA.................... 17 2 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................GGGCAGGGATAATTAGTAA................... 19 3 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GCTGGCAGGGATAATTAGT..................... 19 3 7 0.14 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................AGGCGAGTAGTAGTAGTAGTAGTAGT.................................................................................................... 26 2 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................AGAAGAGTAGTAGTAGTAGTAGTAGTTG.................................................................................................. 28 3 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................AGGCGAGTAGTAGTAGTAGTAGTAG..................................................................................................... 25 2 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GGCAGGGATAATTAGT..................... 16 2 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0
..................................................................................................................................GTAGTAGTAGTAATAGTAGT.................................................................................................... 20 0 12 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................AGTAACTCGTATTTTT. 16 1 13 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......ATGAGCAGGTGCAGAGACAA................................................................................................................................................................................................................................ 20 3 13 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................AGGCGAGTAGTAGTAGTAGTAGTA...................................................................................................... 24 2 13 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................GTAGAGCTCGCACGAGATT................................................................................... 19 3 14 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................AGGCGAGTAGTAGTAGTAGTAGT....................................................................................................... 23 2 17 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................AGAGGGTAGAGTTAGCATG................................................................................................................................................................................... 19 3 19 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GCAGGGATAATTAGTA.................... 16 2 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................................AGGCGAGTAGTAGTAGTAGTAG........................................................................................................ 22 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AGTAGTAATAGTAGT.................................................................................................... 15 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:12314034-12314283 - dsi_28779 GAT---------ATATACTCGTACACTA-CTCTGTTGTTGTGGTT--------------------GTCG-TCGTGTGC-GTGGTTCTCCCAGCTCAATAGTCCGTGTTTG---TTGC----------------------------T---------------------------AGTTAG-------------------TCG--------------TAGTT-GAGT-GTT-TTGG---CTAGGCTAGGGGGGCT--TCTGCTCA--------TC-------ATC-------------------------ATCATTATC--ATCATCTCGAGC-----------------GCGCTGT-ACCGA--------------G-TTGCTAATCCT----------------------TGAC-----CA-TCTTGC-TTTTAGCCTCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAAC
droSec2 scaffold_0:13145472-13145718 - GAT---------ATATACTCGTACACTA-CTCTGTTG---TGGTT--------------------GTCG-TCGTGTGC-GTGGTTCTCCCAGCTCAATAGTCCGTGTTTG---TTGC----------------------------T---------------------------AGTTGG-------------------TCG--------------TAGTT-GAGT-GTT-TTGG---CTAGGCTAGGGGGGCT--TCTGCTCA--------TC-------ATC-------------------------ATCATTATC--ATCATCTCGAGC-----------------GCGCTGT-ACCGA--------------G-TTGCTAATCCT----------------------TGAC-----CA-TCTTGC-TTTTAGCCTCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAAC
dm3 chr3R:8850914-8851160 + GAT---------AT--ACTCGTACACTA-CTCTGTTGTTGTGGTT--------------------GTCG-TCGTGTGC-GTGGTTCTCCCAGCTCAATAGTCCGTGTTCG---TTGC----------------------------T---------------------------AGTTAG-------------------TCG--------------TAGTT-GAGT-GTTTTTGG---CTAGGCTAGGGGGGCTT-TCTGCTCA--------TC-------ATC-------------------------ATCA---TC--ATCGTCTCGAGC-----------------GCGCTGT-ACCGA--------------G-TTGCTAATCCT----------------------TGAC-----CA-TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAAC
droEre2 scaffold_4770:12797822-12798032 - GAT---------A----------C---A-CTCTGTTGTTGTGGTTG------------------------TCGTGTGC-GTGGTTCTCCCAGCTCTATAGTCCATGTTTG---TTGC----------------------------T---------------------------AGTTAG-------------------TCG--------------TAGTT-GAGT-GT---TGG---ATAGGCTAGG---GCT--TTTGCTCA--------TC------------------------------------------------------GAGC-----------------GCGCTGT-ACCGA--------------G-TTGCTAATCCT----------------------TGACC--A-CC-TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAAC
droYak3 3R:13145937-13146145 + GAT---------A----------C---A-CTCTGTTGTTGTGGTTG------------------------TCGTGTGC-GTGGTTCTCCCAGCTCTATAGTCCGTGTTTG---TTGC----------------------------T---------------------------AGTTAG-------------------TCG--------------TAGTT-GAGT-GT---TGG---CTAGGCTAGG---GCT--TTTGCTCA--------TT------------------------------------------------------GAGC-----------------GCGCTGT-ACCGA--------------G-TTGCTAATCCT----------------------TGAC-----CC-TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAAC
droEug1 scf7180000409802:1176407-1176627 - GAT---------A----------C---ACCTCTGTTGTTGTGGTAA------------------------TCGTGTAC-GTGGTTCTGCCAGCTC--TAGTCCGTGTTTGTTGTTGC----------------------------T---------------------------AGTTAG-------------------TTG--------------TAGTT-GAGT-GTG-TTGG---CTAGGCTAGG---ACA--TTTGCTCA--------CT------------------------------------------------------GTATGTGCTCCCA------------TA-AAACGA--------------G-TTGCTAATCCT----------------------TGACC--A-CC-TCTTGCTTTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAAC
droBia1 scf7180000299102:1103010-1103236 - TAT---------GAGA-GT----C---A-CTCTGTTGTTGTGGTAAT------------------AT--ATCGTGTGC-GTGGTTCTCCCAGCTC--TAGTCCGTGTTT--TGTTGC----------------------------T---------------------------AGTTAG-------------------TCG--------------TAGTT-GAGT-GT---TGG---CTAGGCTAGG---GCT--TTTGCTCA--------CC------------------------------------------------------GAGTGTTC----------GGTTCGCTGC-TCCGA--------------G-TTGCTAATCCC----------------------TGACC--ATCC-TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAAC
droTak1 scf7180000415653:12074-12289 - ----------------------------------TTGTTGTGGTAA------------------------TAGTGTGC-GTGGTTCTCCCAGCTC--TAGTCCGTGTTTG-TGTTGC----------------------------T---------------------------AGTTAGTC-----------------TCG--------------TAGTT-GAGT-GT---TGG---CTAGGCTAGG---GCTTTTTTGCTCA--------CC------------------------------------------------------CTGTGTGC--CCACTAATGGT---CTA-ATCCCA--------------G-TTGCTAATCCT----------------------TGACC--C-CC-TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAAC
droEle1 scf7180000486474:148761-148998 + GAG---------ACAA----G-ACACTC-CTCTGT---TGTGGTAA------------------------TCGTGTGC-GTGGTTCTCCCAGCTC--TAGTCCGTGTTTG---TTGC----------------------------TAGTTGCT------------------------AGTTTG--CTAGTTAGTCTAGTCG--------------TAGTT-GAGT-GT---TGG---CTAGGCTAGG---GCTA-TTTGCTCA--------TC------------------------------------------------------GAGC-----------------TCGCTGGAGACG--------ATGC---GTTTGCTAATCCT----------------------TGAA-----CC-TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAAC
droRho1 scf7180000778053:62215-62418 + GAC------------------------A-CTCTGT---TGTGGTAA------------------------TCGTGTGC-GTGGTTCTCCCAGCTC--TAGTCCGTGTTTG---TTGC----------------------------T---------------------------AGTTAG-------------------TCG--------------TAGTT-GAGT-GT---TGG---CTAGGCTAGG---GCT--TTTGCTCA--------TC------------------------------------------------------GAGT-----------------TCGCTGG-ACA---------ATGC---G-TTGCTAATCCA----------------------TGAC-----CC-TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAAC
droFic1 scf7180000453800:1314144-1314354 + GAG---------A----------------ATCTGTTG-TGTGGTAA------------------------TCGTGTGC-GTGGTTCTCCCAGCTC--TAGTCCGTGTTTG---TTGC----------------------------T---------------------------AGTTAG-------------------TCG--------------TAGTT-CAGT-GT---TGG---CTAGGCTAGG---GCT--TTTGCTCA--------TC-----CGATCTGGCT---------------------------------------GCTTGTGC-----------------TA--ATC----------------G-TTGCTAATCCA----------------------TGAT-----CC-TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCGT---CGAGCATAAAAAC
droKik1 scf7180000302634:820804-821062 + GGC---------ATATACT----------CTC------TGTGGTAAA-CGTGTGTTGTGTGTGTTGTTG-TGTTGTGT-GTGGCTC-CCCAGT----TAGTCCGTGTTCG---TTGCTGTTAT--------------------------CGTT---------AGTCACTGGTTGGTTAG-------------------TCG--------------TAGTT-GAGT-GT---TGG-CTATAGGCTAGG---GCT----TGCTTA--------CT------------------------------------------------------GAG--------------------------ACCGAGTTGGACATGC---C-TTGCTAATCCT----------------TATCCTTGCCC--T-CC-TCTTGCTTTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCACCTGTCATCGTCGAGCATTAAAGC
droAna3 scaffold_13340:9329246-9329486 - GATAATGATAATAA------GA-----A-CTCTGCT-CTGTGGTAATCCGTGT---------GTTATCGATC--GTGT-GTGGGCCT--------------TCATGTTTG---TCGC----------------------------T---------------------------AGTTAGTCTATTCTATCTATTCT--------------ATATGTAGTT-GAGT-GT---TCT---CTAGGCTAGG---GAT--TTT--TCA--------TA------------------------------------------------------GATC-----------------T-GCCGG-ATCT---------------T-TTGCTAATCTC----------------------TGACATGA-CCTTCTGTG-TTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCGTCGTCGAACATAAAAAC
droBip1 scf7180000396712:2950499-2950739 - AAT---------AAGA-----------A-CTCTGCT-CTGTGGTAATCCGTGT---------GTTATCGATC--GTGT-GTGGGCCT--------------TCATGTTTG---TCGC----------------------------T---------------------------AGTTAGTCTG--TTAATCTATCT--------------ATCTGTAGTT-GAGT-GTG-TTCT---CTAGGCTAGG---GAA--T--ACATATATATTGGAAAGATCTGAT---------------------------------------------------------------------CCGG-ATCCT--------------G-TTGCTAATCTC----------------------TGACATGC-CA-TTTTGCCTTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCGT---CGAGCATAAAAAC
dp5 2:11317306-11317367 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAGTAATCATGTGTTAT---CGAGCATAAAAGC
droPer2 scaffold_0:9198290-9198580 + GAT---------A----------------GTTTGTT--TGTTGTGT------------------------TGTTGTTG-CTGTTGCTCCCGTT----TATCCTGT---------TGT------CTGGCGGCCAAAAGCCAGTAGCCAGTAGCCAGTATCTCCAGTATCTCCAGTGTTGG-------------------TCGTAGTCACATATATGTAGTTTTCGTGGT---TGG---CTAGGCTAGG---GCT-----ACTAA--------CA------------------------------------------------------GAATGTG----------------------ATTGAGCTGCAGACGCGCTGCCCCCCAGTCGAAGACCGATGATTCTAATATCCACTTCC----AC-TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAGTAATCATGTGTTAT---CGAGCATAAAAGC
droWil2 scf2_1100000004902:11588165-11588441 + GAT---------ATCCGGTT-------A-TTCAGT-GCTGTGGTTAGTCGAGT---------ATGTGTATGC--GTGCAGTGGGCCA-GCATATT--TAGTTTATGTTTA---TTGTTATTGT--------------------------T------------------------GTTAC-------------------TGC--------------TGTTT-TTGT-GT---AGGCCTATAGGCTAGG---GTC--CTTACTAA--------CC-----AGAAGTAGTTGATACTTATGTAAAGACTTG--CA---T-AGCTTGTCAAGAGC-----------------TTGGAGT-AATAT--------------GTTTCCTAATCGA----------------------ATGG-----CA-TCTTAT-TTACAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAAC
droVir3 scaffold_12855:3964638-3964701 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-TCTTGC-TTTTAGCACCTGAGTGCGCCCGACCCTAATAACCATCTGTCAT---CGAGCATTAAATC
droMoj3 scaffold_6540:8271584-8271647 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-TCTTGC-TTTTAGCACCTGAGTGCGCCCGACCCTAATAACCATCTGTCAT---CGAGCATTAAATC
droGri2 scaffold_14906:6585732-6585794 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-TCTTGC-TTTTAGCACCTGAGTGCGCCCGACCCTAATAACCATCTGACAT---CGAGCATTAAATC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAT---------ATATACTCGTACACTA-CTCTGTTGTTGTGGTT--------------------GTCG-TCGTGTGC-GTGGTTCTCCCAGCTCAATAGTCCGTGTTTG---TTGC----------------------------T---------------------------AGTTAG-------------------TCG--------------TAGTT-GAGT-GTT-TTGG---CTAGGCTAGGGGGGCT--TCTGCTCA--------TC-------ATC-------------------------ATCATTATC--ATCATCTCGAGC-----------------GCGCTGT-ACCGA--------------G-TTGCTAATCCT----------------------TGAC-----CA-TCTTGC-TTTTAGCCTCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGCCTCTGAGTGCGCCCG.....................................2114.00440000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................C-TTTTAGCCTCTGAGTGCGCC.......................................2113.00312000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAGCCTCTGAGTGCGCCC......................................2113.00321000000000000000
...............TACTCGTACACTA-CTCTGTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00330000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCTAATAATCATCTGTCAT---CGAGC........2712.00202000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCCTCTGAGTGCGCCCG.....................................2012.00201100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GCTAATCCT----------------------TGAC-----CA-TCTTGC-TTTTA......................................................2612.00200000000000002000
.AT---------ATATACTCGTACACTA-CTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00220000000000000000
...............................CTGTTGTTGTGGTT--------------------GTCG-TC................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000010000
.......................................................................................................................................................................................................CG--------------TAGTT-GAGT-GTT-TTGG---CGC........................................................................................................................................................................................................................................................2111.00101000000000000000
............ATATACTCGTACACTA-CTCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
..........................................................................................................................................................................................................................TT-GAGT-GTT-TTGG---CTAGGCTA...................................................................................................................................................................................................................................................2111.00100000000000010000
.......................................................................................................................................................................................................CG--------------TAGTT-GAGT-GTT-TTGG---CTA........................................................................................................................................................................................................................................................2111.00101000000000000000
........................................................................................CCAGCTCAATAGTCCGTGTTC...........................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCCTCTGAGTGCGCCCGG....................................2111.00101000000000000000
.............................................................................................TCAATAGTCCGTGTTTG---TTGC----------------------------T---------------------------...........................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATCATCTGTCAT---CGAGC........2011.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCATCTGTCAT---CG...........1511.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCCTCTGAGTGCGCCCGA....................................2111.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................CATCTCGAGC-----------------GCGCTGT-ACCGA--------------.................................................................................................................2211.00100100000000000000
...............................................................................................................................................................................................................................................................................TC-------ATC-------------------------ATCATTATC--ATCATC...................................................................................................................................................................20100.10100000000001000000
....................................................................................................................................................................................................................................................................TCA--------TC-------ATC-------------------------ATCATTATC--A........................................................................................................................................................................18200.05100000000001000000
droSec2
GAT---------ATATACTCGTACACTA-CTCTGTTG---TGGTT--------------------GTCG-TCGTGTGC-GTGGTTCTCCCAGCTCAATAGTCCGTGTTTG---TTGC----------------------------T---------------------------AGTTGG-------------------TCG--------------TAGTT-GAGT-GTT-TTGG---CTAGGCTAGGGGGGCT--TCTGCTCA--------TC-------ATC-------------------------ATCATTATC--ATCATCTCGAGC-----------------GCGCTGT-ACCGA--------------G-TTGCTAATCCT----------------------TGAC-----CA-TCTTGC-TTTTAGCCTCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................TTGG---CTAGGCTAGGGGGGC............................................................................................................................................................................................................................................1912.0021001
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGAC-----CA-TCTTGC-TTTTAGCCT..................................................2111.0011000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAATCATCTGTCAT---CGAG.........2011.0010010
.............................................................................................................................................................................................................................GAGT-GTT-TTGG---CTAGGCTAGG.................................................................................................................................................................................................................................................2111.0010100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAATCATCTGTCAT---CGAGC........2111.0010100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCATCTGTCAT---CGAGCATA.....2211.0011000
..................................................................................................................................................................................................................................GTT-TTGG---CTAGGCTAGGGGG..............................................................................................................................................................................................................................................2011.0010010
...................................................................................................................GC----------------------------T---------------------------AGTTGG-------------------TCG--------------TAGTT-GAGT-......................................................................................................................................................................................................................................................................2111.0010100
................................................................................................................................................................................................................................................................................C-------ATC-------------------------ATCATTATC--ATCATC...................................................................................................................................................................19190.0510010
........................................................................................................................................................................................................................................................................................ATC-------------------------ATCATTATC--ATCATC...................................................................................................................................................................18200.0510010
dm3
GAT---------AT--ACTCGTACACTA-CTCTGTTGTTGTGGTT--------------------GTCG-TCGTGTGC-GTGGTTCTCCCAGCTCAATAGTCCGTGTTCG---TTGC----------------------------T---------------------------AGTTAG-------------------TCG--------------TAGTT-GAGT-GTTTTTGG---CTAGGCTAGGGGGGCTT-TCTGCTCA--------TC-------ATC-------------------------ATCA---TC--ATCGTCTCGAGC-----------------GCGCTGT-ACCGA--------------G-TTGCTAATCCT----------------------TGAC-----CA-TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................GTTTTTGG---CTAGGCTAGGGG...............................................................................................................................................................................................................................................20110.001000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAGTGCGCCCGACCCTAC..............................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TT-TCTGCTCA--------TC-------ATC-------------------------ATCA---TC--.........................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100032000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TCG-TCGTGTGC-GTGGTTCTCC...............................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................C-------ATC-------------------------ATCA---TC--ATCGTCTCGAC..............................................................................................................................................................2124.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCATCTGTCAT---CGAGCATAAAAAC2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TA-CTCTGTTGTTGTGGTT--------------------GTC....................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACCCTAATAATCATCTGTCAT---CG...........2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGC-TTTTAGCCCCTGAGTGC..........................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................T-GTTTTTGG---CTAGGCTAGGGG...............................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000020000000000000000000000000000
..............................................................................................CAATAGTCCGTGTTCG---TTGC----------------------------T---------------------------...........................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................TT--------------------GTCG-TCGTGTGC-GTGGTTC..................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CT----------------------TGAC-----CA-TCTTGC-TTTTAGCC...................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................G--------------TAGTT-GAGT-GTTTTTGG---CTA........................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATAATCATCTGTCAT---CGAGCATA.....2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................CTGTTGTTGTGGTT--------------------GTCG-TCG...............................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
..............................TCTGTTGTTGTGGTT--------------------GTCG-TC................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000000000000000000000000000
............................................................................................CTCAATAGTCCGTGTTCG---TTG....................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.......................................GTGGTT--------------------GTCG-TCGTGTGC-GTG......................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TAATCCT----------------------TGAC-----CA-TCTTGC-TTTTAG.....................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GGTT--------------------GTCG-TCGTGTGC-GTGGT....................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................T-ACCGA--------------G-TTGCTAATCCT----------------------TGAC-----CA-TCT...............................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCAT---CGAGCATAAAAAC2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CGAGC-----------------GCGCTGT-ACCGA--------------G-TTG............................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GCTAATCCT----------------------TGAC-----CA-TCTTGC-...........................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................TTCTCCCAGCTCAATAGTCCG................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................ATAGTCCGTGTTCG---TTGC----------------------------T---------------------------AGT........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCTGTTGTTGTGGTT--------------------GTCG-TCGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTAATAATCATCTGTCAT---CGAGCA.......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TT-GAGT-GTTTTTGG---CTAGGCT....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.....................................................................................................CCGTGTTCG---TTGC----------------------------T---------------------------AGTTAG-------------------T.................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................CGA--------------G-TTGCTAATCCT----------------------TGAC-----CA-..................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CTT-TCTGCTCA--------TC-------ATC-------------------------ATCA---TC--.........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCATCTGTCAT---CGAGCA.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................ATCA---TC--ATCGTCTCGAGC-----------------GCG.........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................ATC-------------------------ATCA---TC--ATCGTCTCGAGC-----------------............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................G--------------TAGTT-GAGT-GTTTTTGG---CT.........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................TGGTT--------------------GTCG-TCGTGTGC-GT.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................T---------------------------AGTTAG-------------------TCG--------------TAGTT-GAGT-G.....................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...................................................................................................................................................................................................................................................................................................................................TCTCGAGC-----------------GCGCTGT-ACCGA--------------G-...............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................CG--------------TAGTT-GAGT-GTTTTTGG---C..........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................CTAGGCTAGGGGGGCTT-TCTG.....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
....................GTACACTA-CTCTGTTGTTGTGGTT--------------------G......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAATCATCTGTCAT---CGAGCA.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAATCATCTGTCAT---CGAG.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
....................................GTTGTGGTT--------------------GTCG-TCGTGTGC-.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCATCTGTCAT---CGAGC........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGCCCGACCCTAATAATC.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCGACCCTAATAATCATCTGTCAT---C............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................T--------------------GTCG-TCGTGTGC-GTGGTTCT.................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
......................................................................................TCCCAGCTCAATAGTCCGTGTTCG---TTGC----------------------------.......................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AATCCT----------------------TGAC-----CA-TCTTGC-TTTTAG.....................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................C-----------------GCGCTGT-ACCGA--------------G-TTGCTAATC......................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GTGGTT--------------------GTCG-TCGTGTGC-GTGGTTC..................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................TTGC----------------------------T---------------------------AGTTAG-------------------TCG--------------TAGTT-GA.........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..........................................................................................................TTCG---TTGC----------------------------T---------------------------AGTTAG-------------------TCG--------------TAGA.............................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCGACCCTAATAATCATCTGTC..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................GTTTTTGG---CTAGGCTAGG.................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAGTGCGCCCGACCCTAATAATC.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................AGCTCAATAGTCCGTGTTCG---T......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..........................................................................GTGC-GTGGTTCTCCCAGCTCA........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCCCTGAGTGCGCCCGAC...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ACTCGTACACTA-CTCTGTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TTTTGG---CTAGGCTAGGGGG..............................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCTGTCAT---CGAGCATA.....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCCCTGAGTGCGCCCGACC..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GCTAATCCT----------------------TGAC-----CA-TCTTGC-TTTTA......................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................A---TC--ATCGTCTCGAGC-----------------GCGC........................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................GTTTTTGG---CTAGGCTAGGG................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATCATCTGTCAT---CGAGCA.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAT---CGAGCATAAAA..1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GTCG-TCGTGTGC-GTGGTTCTC................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................TGTGGTT--------------------GTCG-TCGTGTGC-GTG......................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..T---------AT--ACTCGTACACTA-CTCTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CTCGAGC-----------------GCGCTGT-ACCGA--------------G-T..............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TCTCGAGC-----------------GCGCTGT-ACCGA--------------.................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TTTTGG---CTAGGCTAGGGGGT.............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................TGTTGTGGTT--------------------GTCG-TCGTGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................................................................G---TTGC----------------------------T---------------------------AGTTAG-------------------TCG--------------TAGTT-G..........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.............................................................................................................................................................................AGTTAG-------------------TCG--------------TAGTT-GAGT-GGG...................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCTGTCAT---CGAGCAT......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCTAATAATCATCTGTCA.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................GT-ACCGA--------------G-TTGCTAATCC.....................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TGGTT--------------------GTCG-TCGTGTGC-GTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGAGTGCGCCCGACCCTAAT.............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TTGTGGTT--------------------GTCG-TCGTGTGC-G........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTGTCAT---CGAGCATA.....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................GCTCA--------TC-------ATC-------------------------ATCA---TC--ATCGTCTCGAG..............................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CT----------------------TGAC-----CA-TCTTGC-TTTTAGC....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TCCT----------------------TGAC-----CA-TCTTGC-TTTTA......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................CTCA--------TC-------ATC-------------------------ATCA---TC--ATCGTC...................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................A-CTCTGTTGTTGTGGTT--------------------GTCG-..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................A-TCTTGC-TTTTAGCCCCTGAG.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................................................................................................................................................................................TAG-------------------TCG--------------TAGTT-GAGT-GTTTTTGG---...........................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
..................................................................................GTTCTCCCAGCTCAATAGTCCG................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GC----------------------------T---------------------------AGTTAG-------------------TCG--------------TAGTT-GAGT-......................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TTTGG---CTAGGCTAGGGGGGCT...........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................GGCTAGGGGGGCTT-TCTGC....................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATAATCATCTGTCAT---CGAGCAT......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TCGTCTCGAGC-----------------GCGCTGT-ACC.................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTAATAATCATCTGTCAT---CGAGCA.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGAGTGCGCCCGACCCT................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TTTTGG---CTAGGCTAGGGGGGC............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGACCCTAATAATCATCTGTCAT---CGAG.........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GTCG-TCGTGTGC-GTGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCGCCCGACCCTAATA............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................CCCAGCTCAATAGTCCGTGTTCG---TTGC----------------------------T---------------------------...........................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TGGTT--------------------GTCG-TCGTGTGC-GTGGT....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCTGTCAT---CGAGCATAAAAAC2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................AGT-GTTTTTGG---CTAGGCTAGGGG...............................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCTGAGTGCGCCCGACC..................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...................................................................................................................................................................................................................................................................CTCA--------TC-------ATC-------------------------ATCA---TC--ATC......................................................................................................................................................................18200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GAT---------A----------C---A-CTCTGTTGTTGTGGTTG------------------------TCGTGTGC-GTGGTTCTCCCAGCTCTATAGTCCATGTTTG---TTGC----------------------------T---------------------------AGTTAG-------------------TCG--------------TAGTT-GAGT-GT---TGG---ATAGGCTAGG---GCT--TTTGCTCA--------TC------------------------------------------------------GAGC-----------------GCGCTGT-ACCGA--------------G-TTGCTAATCCT----------------------TGACC--A-CC-TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................CTGTTGTTGTGGTTG------------------------TCGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCTAATAATCATCTGTCAT---CGAGC........2711.0010000010
.........................................................................................................................................................................................................................GTT-GAGT-GT---TGG---ATAGGCTAGG---G.............................................................................................................................................................................................................................................2311.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCTGTCAT---CGAGCATA.....1911.0011000000
droYak3
GAT---------A----------C---A-CTCTGTTGTTGTGGTTG------------------------TCGTGTGC-GTGGTTCTCCCAGCTCTATAGTCCGTGTTTG---TTGC----------------------------T---------------------------AGTTAG-------------------TCG--------------TAGTT-GAGT-GT---TGG---CTAGGCTAGG---GCT--TTTGCTCA--------TT------------------------------------------------------GAGC-----------------GCGCTGT-ACCGA--------------G-TTGCTAATCCT----------------------TGAC-----CC-TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................TAG-------------------TCG--------------TAGTT-GAGT-GT---TGG---...........................................................................................................................................................................................................................................................2011.00101000000000
........................................................................................................................................................................................................................AGTT-GAGT-GT---TGG---CTAGGCTAGG---G.............................................................................................................................................................................................................................................2411.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCATCTGTCAT---CGAGC........1811.00110000000000
droEug1
GAT---------A----------C---ACCTCTGTTGTTGTGGTAA------------------------TCGTGTAC-GTGGTTCTGCCAGCTC--TAGTCCGTGTTTGTTGTTGC----------------------------T---------------------------AGTTAG-------------------TTG--------------TAGTT-GAGT-GTG-TTGG---CTAGGCTAGG---ACA--TTTGCTCA--------CT------------------------------------------------------GTATGTGCTCCCA------------TA-AAACGA--------------G-TTGCTAATCCT----------------------TGACC--A-CC-TCTTGCTTTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAACSizeHit CountTotal NormTotal
No Reads
droBia1
TAT---------GAGA-GT----C---A-CTCTGTTGTTGTGGTAAT------------------AT--ATCGTGTGC-GTGGTTCTCCCAGCTC--TAGTCCGTGTTT--TGTTGC----------------------------T---------------------------AGTTAG-------------------TCG--------------TAGTT-GAGT-GT---TGG---CTAGGCTAGG---GCT--TTTGCTCA--------CC------------------------------------------------------GAGTGTTC----------GGTTCGCTGC-TCCGA--------------G-TTGCTAATCCC----------------------TGACC--ATCC-TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAACSizeHit CountTotal NormTotal
No Reads
droTak1
----------------------------------TTGTTGTGGTAA------------------------TAGTGTGC-GTGGTTCTCCCAGCTC--TAGTCCGTGTTTG-TGTTGC----------------------------T---------------------------AGTTAGTC-----------------TCG--------------TAGTT-GAGT-GT---TGG---CTAGGCTAGG---GCTTTTTTGCTCA--------CC------------------------------------------------------CTGTGTGC--CCACTAATGGT---CTA-ATCCCA--------------G-TTGCTAATCCT----------------------TGACC--C-CC-TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAACSizeHit CountTotal NormTotal
No Reads
droEle1
GAG---------ACAA----G-ACACTC-CTCTGT---TGTGGTAA------------------------TCGTGTGC-GTGGTTCTCCCAGCTC--TAGTCCGTGTTTG---TTGC----------------------------TAGTTGCT------------------------AGTTTG--CTAGTTAGTCTAGTCG--------------TAGTT-GAGT-GT---TGG---CTAGGCTAGG---GCTA-TTTGCTCA--------TC------------------------------------------------------GAGC-----------------TCGCTGGAGACG--------ATGC---GTTTGCTAATCCT----------------------TGAA-----CC-TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAACSizeHit CountTotal NormTotal
No Reads
droRho1
GAC------------------------A-CTCTGT---TGTGGTAA------------------------TCGTGTGC-GTGGTTCTCCCAGCTC--TAGTCCGTGTTTG---TTGC----------------------------T---------------------------AGTTAG-------------------TCG--------------TAGTT-GAGT-GT---TGG---CTAGGCTAGG---GCT--TTTGCTCA--------TC------------------------------------------------------GAGT-----------------TCGCTGG-ACA---------ATGC---G-TTGCTAATCCA----------------------TGAC-----CC-TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAACSizeHit CountTotal NormTotal
No Reads
droFic1
GAG---------A----------------ATCTGTTG-TGTGGTAA------------------------TCGTGTGC-GTGGTTCTCCCAGCTC--TAGTCCGTGTTTG---TTGC----------------------------T---------------------------AGTTAG-------------------TCG--------------TAGTT-CAGT-GT---TGG---CTAGGCTAGG---GCT--TTTGCTCA--------TC-----CGATCTGGCT---------------------------------------GCTTGTGC-----------------TA--ATC----------------G-TTGCTAATCCA----------------------TGAT-----CC-TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCGT---CGAGCATAAAAACSizeHit CountTotal NormTotal
No Reads
droKik1
GGC---------ATATACT----------CTC------TGTGGTAAA-CGTGTGTTGTGTGTGTTGTTG-TGTTGTGT-GTGGCTC-CCCAGT----TAGTCCGTGTTCG---TTGCTGTTAT--------------------------CGTT---------AGTCACTGGTTGGTTAG-------------------TCG--------------TAGTT-GAGT-GT---TGG-CTATAGGCTAGG---GCT----TGCTTA--------CT------------------------------------------------------GAG--------------------------ACCGAGTTGGACATGC---C-TTGCTAATCCT----------------TATCCTTGCCC--T-CC-TCTTGCTTTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCACCTGTCATCGTCGAGCATTAAAGCSizeHit CountTotal NormTotal
No Reads
droAna3
GATAATGATAATAA------GA-----A-CTCTGCT-CTGTGGTAATCCGTGT---------GTTATCGATC--GTGT-GTGGGCCT--------------TCATGTTTG---TCGC----------------------------T---------------------------AGTTAGTCTATTCTATCTATTCT--------------ATATGTAGTT-GAGT-GT---TCT---CTAGGCTAGG---GAT--TTT--TCA--------TA------------------------------------------------------GATC-----------------T-GCCGG-ATCT---------------T-TTGCTAATCTC----------------------TGACATGA-CCTTCTGTG-TTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCGTCGTCGAACATAAAAACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGCCCCTGAGTGCGCCCG.....................................2111.001100000
..............................................................GTTATCGATC--GTGT-GTGGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TG-TTTTAGCCCCTGAGTGCGCC.......................................2211.001100000
............................................................................................................TG---TCGC----------------------------T---------------------------AGTTAGTCTATTCT.............................................................................................................................................................................................................................................................................................................2111.001000001
....................................................................................................................................................................................................................................................................................................................................................................ATCT---------------T-TTGCTAATCTC----------------------TGACA.........................................................................2111.001100000
.............A------GA-----A-CTCTGCT-CTGTGGTAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................................................................................................................................................................................................................GAGT-GT---TCT---CTAGGCTAGG---..............................................................................................................................................................................................................................................1911.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATCATCTGTCGTCGTCGA..........2111.001100000
............................................................................................................................................................................................................................................................T--TTT--TCA--------TA------------------------------------------------------GATC-----------------T-GCCGG-AT..................................................................................................................................2111.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCTGTCGTCGTCGAAC........2011.001100000
............................................................................................................................................................................................................................................................T--TTT--TCA--------TA------------------------------------------------------GATC-----------------T-GCCGG-A...................................................................................................................................2011.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTAATAATCATCTGTCGT................2111.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................G-TTTTAGCCCCTGAGTGCGC........................................2011.001100000
droBip1
AAT---------AAGA-----------A-CTCTGCT-CTGTGGTAATCCGTGT---------GTTATCGATC--GTGT-GTGGGCCT--------------TCATGTTTG---TCGC----------------------------T---------------------------AGTTAGTCTG--TTAATCTATCT--------------ATCTGTAGTT-GAGT-GTG-TTCT---CTAGGCTAGG---GAA--T--ACATATATATTGGAAAGATCTGAT---------------------------------------------------------------------CCGG-ATCCT--------------G-TTGCTAATCTC----------------------TGACATGC-CA-TTTTGCCTTTTAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCGT---CGAGCATAAAAACSizeHit CountTotal NormTotal
No Reads
dp5
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAGTAATCATGTGTTAT---CGAGCATAAAAGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACCCTAGTAATCATGTGTTAT---CGAGC........2811.0010010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GC-TTTTAGCCCCTGAGTGCGC........................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATCATGTGTTAT---CGAGCA.......2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGC-TTTTAGCCCCTGAGTGCGCCC......................................2711.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCCCGACCCTAGTAATC.........................2011.0010000010000
droPer2
GAT---------A----------------GTTTGTT--TGTTGTGT------------------------TGTTGTTG-CTGTTGCTCCCGTT----TATCCTGT---------TGT------CTGGCGGCCAAAAGCCAGTAGCCAGTAGCCAGTATCTCCAGTATCTCCAGTGTTGG-------------------TCGTAGTCACATATATGTAGTTTTCGTGGT---TGG---CTAGGCTAGG---GCT-----ACTAA--------CA------------------------------------------------------GAATGTG----------------------ATTGAGCTGCAGACGCGCTGCCCCCCAGTCGAAGACCGATGATTCTAATATCCACTTCC----AC-TCTTGC-TTTTAGCCCCTGAGTGCGCCCGACCCTAGTAATCATGTGTTAT---CGAGCATAAAAGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................CTCCCGTT----TATCCTGT---------TGT------CT...........................................................................................................................................................................................................................................................................................................................................................................2111.001000100
...................................................................................................................................................................................................................................................................CTAA--------CA------------------------------------------------------GAATGTG----------------------ATTGAGCTT...........................................................................................................................2211.001000001
droWil2
GAT---------ATCCGGTT-------A-TTCAGT-GCTGTGGTTAGTCGAGT---------ATGTGTATGC--GTGCAGTGGGCCA-GCATATT--TAGTTTATGTTTA---TTGTTATTGT--------------------------T------------------------GTTAC-------------------TGC--------------TGTTT-TTGT-GT---AGGCCTATAGGCTAGG---GTC--CTTACTAA--------CC-----AGAAGTAGTTGATACTTATGTAAAGACTTG--CA---T-AGCTTGTCAAGAGC-----------------TTGGAGT-AATAT--------------GTTTCCTAATCGA----------------------ATGG-----CA-TCTTAT-TTACAGCCCCTGAGTGCGCCCGACCCTAATAATCATCTGTCAT---CGAGCATAAAAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................TTCAGT-GCTGTGGTTAGTCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACCCTAATAATCATCTGTCAT---CGAG.........2711.00110000
...............................................................................................................................................................................TTAC-------------------TGC--------------TGTTT-TTGT-GT---AGG..............................................................................................................................................................................................................................................................2111.00101000
droVir3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-TCTTGC-TTTTAGCACCTGAGTGCGCCCGACCCTAATAACCATCTGTCAT---CGAGCATTAAATCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAACCATCTGTCAT---CGAGC........2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCTAATAACCATCTGTCAT---CGAGC........2711.001000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................A-TCTTGC-TTTTAGCACCTGAG.............................................2111.001000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCACCTGAGTGCGCCCGA....................................2111.001000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGAGTGCGCCCGACC..................................1911.001000000000000010000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGCGCCCGACCCTAATAA...........................2111.001000000000000000000010000000000000000000000000000000000000000000
droMoj3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-TCTTGC-TTTTAGCACCTGAGTGCGCCCGACCCTAATAACCATCTGTCAT---CGAGCATTAAATCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCAT---CGAGCATTAAATC2011.001100000
droGri2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-TCTTGC-TTTTAGCACCTGAGTGCGCCCGACCCTAATAACCATCTGACAT---CGAGCATTAAATCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 04:33 PM