ID:

dsi_28778

 Coordinate:

x:9732844-9732993 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.4 -15.4 -15.2 -15.2

Flybase annnotation

CDS [x_9732994_9733081_-]; exon [x_9732994_9733183_-]; intron [x_9727257_9732993_-]

Repeatable elements

NameClassFamilyStrand
(CA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GATCCTTTTGGCTATCGCTTGCAGTGCATCGGAACTTGCGTCGGCCGTGTGTAAGTGAACTCGACAATTGGTGCTTCGCAGTTATTTGCCTAATTCTCCATCTCTTTTGTTTTACCCATCTCTGTCTTAATCCACCTTGTTGGTGTTGTGTGTGTGCGATTGTCTCTTTGCGTACGTGTGTGTGTGTGTGTGTCTCTCTGTCAATGTGCTTTTGTTTGTGTGTGTGTGCGTGTTGGCTGTAAATCTGGTT
**************************************************......((....(((((........(((((.......(((((((............................................))))).))........))))))))))))************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M025
embryo
 M024
male body		 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
...................TGCAGTGCATCGGAACTTGCGTCGGC............................................................................................................................................................................................................. 26 0 1 3.00 3 0 1 1 0 0 0 0 1 0 0
..........................CATCGGAACTTGCGTCGGCCGT.......................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..................................................GTAAGTGAACTCGACAATTGGTG................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TGTGTGTGCGATTGTCTC.................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................TGGTGTTGTGTGTGTGCGATT......................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................AGTGCATCGGAACTTGCGTCGGCC............................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........................................TCGGCCGTGTGTAAGTGAACTCGA.......................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
....................................................AAGTGAACTCGACAATTGGTG................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................GTGCGTGTTGGCTGTAAATC..... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...................TGCAGTGCATCGGAACTTGCGTCAGC............................................................................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................TCTCTTTGCGTACGTGTGTGT................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..............TCGCTTGCAGTGCATCGGAACTCGCGT................................................................................................................................................................................................................. 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.............................CGGAACTTGCGTCGGCCGT.......................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
...................TGCAGTGCATCGGAACTTGCGTCGGCC............................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................ATCGGAACTTGCGTCGGCC............................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................GTGCGATTGTCTCTTTGCGTA............................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................TGGGTGAACTCGACAATTGGT.................................................................................................................................................................................. 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......TTGGCTATCGCTTGCAGTGCATCGGAACT...................................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................GCATCGGAACTTGCGTCGGC............................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.....................................................TGTGAACTCGACAATTGGTACT............................................................................................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0
........................................TCGGCCGTGTGTAAGGGAACTCGA.......................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.................CTTGCAGTGCATCGGAACTTG.................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1
......................................................GTGAACTCGACAATTGGTGC................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................CAGTGCATCGGAACT...................................................................................................................................................................................................................... 15 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0
................................AACTCGCGTCGGTCGTGTA....................................................................................................................................................................................................... 19 3 12 0.17 2 0 0 0 2 0 0 0 0 0 0
.............................................................................................................................................................................................................................CTGTGTGCGTGTTGGCTG........... 18 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GTGTGTGCGTGTTGGC............. 16 0 7 0.14 1 0 0 0 1 0 0 0 0 0 0
........................TGCATCGGAACGTGC................................................................................................................................................................................................................... 15 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0
.................................ACTTGCGTCGGCCGTGTTGC..................................................................................................................................................................................................... 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CTGTGTGCGTGTTGGCTC........... 18 2 14 0.07 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TCAATGTGCTTATGT................................... 15 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

CTAGGAAAACCGATAGCGAACGTCACGTAGCCTTGAACGCAGCCGGCACACATTCACTTGAGCTGTTAACCACGAAGCGTCAATAAACGGATTAAGAGGTAGAGAAAACAAAATGGGTAGAGACAGAATTAGGTGGAACAACCACAACACACACACGCTAACAGAGAAACGCATGCACACACACACACACACAGAGAGACAGTTACACGAAAACAAACACACACACACGCACAACCGACATTTAGACCAA
************************************************************************************......((....(((((........(((((.......(((((((............................................))))).))........))))))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 M023
head
 O001
Testis
....GAAAACCGATAGCGAACGTCACG............................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0
.....................................CGCAGCCGGCACACAA..................................................................................................................................................................................................... 16 1 1 1.00 1 0 0 1 0 0 0 0 0
......................................................CACTTGAGCTGTTAACCATGAT.............................................................................................................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................................................TAAAGATTTAGGTGGAACAAC............................................................................................................ 21 3 3 0.67 2 0 2 0 0 0 0 0 0
.......................................................ACTTGAGCAGTTAACCATGAT.............................................................................................................................................................................. 21 3 2 0.50 1 1 0 0 0 0 0 0 0
...........................................CGGCAGACATTCACGTGA............................................................................................................................................................................................. 18 2 2 0.50 1 1 0 0 0 0 0 0 0
........................AGGTAGCGTTGATCGCAGC............................................................................................................................................................................................................... 19 3 10 0.10 1 1 0 0 0 0 0 0 0
.......................................................................................GGGATTAAGAGGCAG.................................................................................................................................................... 15 2 20 0.10 2 0 2 0 0 0 0 0 0
.................................................................................AAAAAACGGTTTAAGAGGTAT.................................................................................................................................................... 21 3 13 0.08 1 0 0 0 0 0 1 0 0
..................................................................................................GTGGAGAAAAGAAAATGAGT.................................................................................................................................... 20 3 17 0.06 1 0 0 1 0 0 0 0 0
................................................................................CAATAAACGGATGTAGAGTT...................................................................................................................................................... 20 3 18 0.06 1 0 1 0 0 0 0 0 0
..................................GATCGCTGCCGCCACACA...................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 1 0
...........................................................................AGCGTCAATAAGCAGA............................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 1 0 0 0
.......................................................................ACCATGCGTCAATAAAC.................................................................................................................................................................. 17 2 20 0.05 1 0 0 0 1 0 0 0 0
............................................................................................TAAGATGTAAAGAAGACAAAA......................................................................................................................................... 21 3 20 0.05 1 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................CACACAGAGCGTCAGTT.............................................. 17 2 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................................................................................ATAAGGTGGAACAAC............................................................................................................ 15 1 20 0.05 1 0 0 0 1 0 0 0 0
..........................................................................................................................................................................GCATGCATACACACACACAC............................................................ 20 1 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:9732794-9733043 - dsi_28778 GATCCT------TTTGGCTATCGCTT---GCAGTGCATCGGAACTTGCGTCGGCCGTGTGTAAGTGAACTCGAC-----AATTG-------------------------GTGCTTCGCAG----------------TTATTTG------------CCTAAT----TCTCC------------------------------------------------------------------ATCTCT------------------------TTTGTTT---------------------------TAC--------C-----CATCTC--TGTCTTAA----TCCACCTTGTTGGTG----TTGTG------------TGTGTGCGATTGTCTCTTTGCGTAC--GT--GTGTGTGTGTGTGTGTC-------------------------------------------------TCTCTGT-CAATGT-----------GCTTTTGTT----T--GTGTG--------TGTGTGCG-TGTTGGCTGTAA------------------ATCTGGTT
droSec2 scaffold_15:957204-957445 - GATCCT------TTTGGCTATCGCTT---GCAGTGCATCGGAACTTGCGTCGGCCGTGTGTAAGTGAACTCGAC-----AATTG-------------------------GTGCTTCGCAG----------------TTATTTG------------CCTATT----TCTCC------------------------------------------------------------------ATCTCT------------------------TTTGTTT---------------------------TAC--------C-----CATCTC--TGTCTTAA----TCCACCTTGTTGGTG----TTGTG------------TGTGTGCGATTCTCTCTTTGCGTAC--GT--GTGTGTGT--------C-------------------------------------------------TCTCTGT-CAATGT-----------GCTTTTGTT----T--GTGTG--------TGTGTGCG-TGTTGACTGTAA------------------ATCTGGTT
dm3 chrX:10259953-10260206 - GATCCT------TTTGGCCATCACTT---GCAGTGCATCGGAACTTGCGTCGGCCGTGTGTAAGTGAACTCGAC-----AATGG-------------------------GTGCTTCGCAG----------------TTATTTG------------CTTATT----TCTCC------------------------------------------------------------------ATCTCT------------------------TTTGTTT---------------------------TAC--------C-----CATCTC--TGTCTTAA----TCCACCTTGTTGGTG----TTGTGTG------TGTGTGTGTGCGATTGTCTCTTTGCGTAC--GT--GTGTGTGTGT------G------------------------------------------------T-CTCTGT-CAATGT-----------GCTTTTGCTTGTAT--GCGTG--------TGTGTGTG-TGTTGGCTGTAA------------------ATCTGGTT
droEre2 scaffold_4690:4875728-4875948 + GATCCT------TTTAGCCATCGCTT---GCAGTGCATCGGAATTCGTGTCGGCCGTGTGTAAGTGAACTTGAA-----TATTG-------------------------GTGCTTCGCAG----------------TTATTTG------------CCTATT----TCTCA------------------------------------------------------------------ATCTCT------------------------TTTGTTT---------------------------TAT--------C-----CATCTC--TGTCTTCA----TCCACCTTGATGGTGTACG-TCTG--------------C-----------TTTTTGTCCCT--GT--GTGCATGTGT------G------------------------------------------------T-CTCTTT-CAATGT-----------GCTGTTGTT----T--GTGTG--------TG--------------TGTAA------------------ATCTGGTT
droYak3 X:18833697-18833947 - GATCCT------TTTGGCCGTCATTT---GCAGTGCATCGGAATTCGTGTCGGCCGTGTGTAAGTGAACTTGAT-----AATTG-------------------------GTGCTTCGCAG----------------TTATTTG------------CCTACT----TCTCT------------------------------------------------------------------ATCTCT------------------------TTTGTTT---------------------------TAC--------C-----CATCTC--TGTCTTTA----TCCACCTTTCTGGTGTG-----TGTG------TGTTTGCGTGCGTGTGTCTGTTTGCGCCC--GT--GTGCATGTGT----T-G------------------------------------------------TCTTCTGT-CAATGT-----------GCTTTTGTT----T--GTGTG--------CGTGTGTG-TGTTGGCTGTAA------------------ATCTGGTT
droEug1 scf7180000409230:55180-55373 + GGTCCTTGTGATTTTGGCGATATTTT---GCAGTGC------------ATCAGCCGAGTGTAAGTGTAA--------CCAATTA-------------------------GTGTATCTCAG----TTAG-----ACAATA----------------CTTTTT----CAACT------------------------------------------------------------------ATCTCT------------------------TTTGTTT---------------------------TAC--------C-----TATCTCATTGTCTTCA----TCCAACTCGTTGGTG-----------------------------------------------------------------------------------------------------------------------------------T--GCTTTGTGTGCGTATG--T--GT--GAGTG--------AGTGTGAG-TGTTGGCTGTAA------------------ATCTGGTT
droBia1 scf7180000302126:3097344-3097557 - GATCCT------TCTGGCCGTGCTCT---GCGGCGC------------CTCGGGCCTGTGTAAGTGCATCCGTG--GACGG-----------------------------CGAC-TGGA----------------AACACC-----TCGTCCTCGCCACCT----CCGCC------------------------------------------------------------------ATCTCT------------------------TTTGTTT---------------------------TAT--------C--CCACCTGCC--TGCCGTGG----TCTCCGCTGC----------------------------------------TCTCTGTGTGC--GTGTGTGTGTGTGT-----------------------------------------------------------GTGT-GTGTGT-----------GCGAGCG--A--GT--GCGGC--------TGTGTGCG-TGTTGGCTGTAA------------------ATCTGGTT
droTak1 scf7180000415394:24660-24868 - GGTCCT------TTTGGCCATATTCT---GCACTGC------------ATCGGCCCTGTGTAAGTGCAATTGAC--CACGA---AGCGGAGTAA----------TCAGA---------------AGAG-----AAAAAAAA-----T----------TATC----CACAT------------------------------------------------------------------ATCTCT------------------------TTTGTTT---------------------------TAC--------------CATCTC--TGTCTTTG----CCCACCTCGCTGGTG----GTGTG------------CGTGTGT------------------------------GCCTGTGTGTGAG------------------------------------------------------------T-----------GAGTGAC--T--GT--GTGCG--------TGTGTGTG-TGTTGGCTGTAA------------------ATCTGGTT
droEle1 scf7180000491272:1422401-1422598 - GATCCT------TTTGGCCTTG---TGCCATGTGGCTATTCCTGGCATATCGGCCTGGTGTAAGTGAAA--------CCTA----------------------------GTGAAATCCTGTAGACTAA-----ACAGT--AGCT------------------------------------------------------------------------------------------------CCCATTGCGCCAGATTTTCCATCCCTTTTACCT---------------------------T----------C-----TTTCTC--TGTCTTTATCCATCCACCTCGCTGGTG-----------------------------------------------------------------------------------------------------------------------------------T-----------GC----------GT--GTGTG--------AGTGTGTG-TGTTGGCTGTAA------------------ATCTGGTT
droRho1 scf7180000763833:6818-7000 - TATCCT------TTTAGCCATATTTC---ACATGGCCATCCCCAGCACTTTGGCCGATTGTAAGTGAAA--------CAAA----------------------------GTGAATCCGAG-----TAA-----ACCAAA---------------------------CATT------------------------------------------------------------------ATCTCT------------------------TTTCTTT---------------------------CA--------------------C--TGTCTTAA-----CCACATT--TGGTG-----------------------------------------------------------------------------------------------------------------------------------T-----------GCGTGT------AT--ATGTG--------TGTGTGTG-TGTTGGCTGTAAATTTTTTTTTTTTTGTGTTTGCGC-G
droFic1 scf7180000453872:611832-612055 + GATCAT------TTTGGCCATA---T---GCAGTGCGCTGCCCAGCACATCGGCATGGTGTAAGTGAATCCG--------ATTA-------------------------GAAAGCCGCAA---AAAGAACGGGAAAGGCGA-----G------------------AACCC------------------------------------------------------------------AACGCT------------------------TTTATTT---------------------------AGC--------A-----TTT------------C----CCCGATTCGCTCGTGTC-----TGTGTATGCGTGTGCGTGCGTGAGCGTCCGCCTGCGTGA--GT--GTATGTGTGT-----------------------------------------------------------------------------------------------TTTTTTT--------CCTCTTTTGGTGTGTGCCTTT------------------TTTTTTGT
droKik1 scf7180000302698:907262-907463 + GGTCCT------TTTAGCCGTA---T---GCAGTTCGCTACACGGCGCGACGGCCAGGTGTAAGTGTCCTTCAGGAGCTAATTG-------------------------GGGAAACGC----------------------------TAACCCACATCCATT----CCGCT------------------------------------------------------------------GTCCTT--------------TTCT------CTTCCCC---------------------------TTG--------C-----CCTCTC--TGTCTT-A----TCCACCTCGGT---G-----------------------------------------------------------------------------------------------------------------------------------TGCGTGTTGTGTATATATA--T--GT--GTGTG--------TGTGTGTG-TGTTGACTGTAA------------------ATCTGGTT
droAna3 scaffold_13335:2474483-2474739 + GATCCT------ATTAGCGGTG---T---GCGGTGCGTTCCAGAGTACGGCGGCCTGGTGTAAGTGTCA--------CTAA-------ACCGGAGTGTCCGTCTTCGT-----ATCCGGA----------------AAAGAACTCCTAATCCGTGC----CTCTTC----TCCCACACTC------------TTTTTTTTGTCGTT-TTTTTTCCT------------------------------------------------AT----CTCTCACTCTTTCTCTCTGCCTGGTCTTGTCTCTTTTTTACCTTT----------TGACTT-A----TCCACCTCGCTTGTT----------------------------------------------------------------------------------------------------------------------------------GT-----------GTC------T--GT--GTGTG--------TGTGTGTG-TGTTGGCTGTAA------------------ATCTGGTT
droBip1 scf7180000396683:101234-101518 - GATCCT------ATTAGCGGTG---T---GCGGTGCGCTCCAAAGTGCGGCGGCCTTGTGTAAGTGTCA--------CCAA-------AACGGAATA-TA---TCCGTG---------------TCCG-----GGAATATAACTTCTAATTCGTGT----TTCTTC----TCCTACACACACACTTCTTTTTTTTTTTTTTTCTTTATTTTTTCCT------------------------------------------------AT----CTCTTACTCTTTCTCACTGATACGTCTTGTCTCTT-TTTACCTTT----------TGTCTT-A----TCCACCTCGGTGGTT----GTGCC------------TGTGTGT----------------------------GTTT-----------------------------------------------------------------------------------GTGTGT------GTGTGTGTG--------AGTGTGTGTGTTTGGCTGTAA------------------ATCTGGTT
dp5 XL_group1a:6901627-6901883 + dps_2556 AATTCT------CCTTGCGATA---T---TCGGTGCAATTGAGATAACGTCGGCCAGGTGTAAGTTGGTGTGCA--TACGA---TTAAAATTGAATT-CT---GCCATA---------------TGAA-----ACAAAAGACGTCCC-------------------------------------------------------------------------------------AAATA------------------TTTG--------------------------------------------------------------------------------AACTTCTATGGTGCA-----TGTG------------TGT------------------------------GTGAGTGTGTGTACGTTTTCATCTTCCACTCTGTCCCTCCTCTGTCTATTTCTCTAGCACTCTCTATATCTAATGT-----------GATTGT------GTGCGTGTG--------TGTGTGTAATTTTGGCTGTAA------------------ATCTGGTT
droPer2 scaffold_25:387845-388104 - dpe_1253 AATTCT------CCTTGCGATA---T---TCGGTGCAATTGAGATAACGTCGGCCAGGTGTAAGTTGGTGTGCA--CACGA---TTAAAATTGAATT-CT---GCCATA---------------TGAA-----ACAAAAGACGTCCC-------------------------------------------------------------------------------------AAATA------------------TTTA-------------------------------------------------------------------------A----ATAACTTCTATGGTGCA-----TGTG------------TGT------------------------------GTGAGTGTGTGTACGTTTTCCTCTTCCACTCTGTCCCTTCTCTGTCTATTTCTCTAGCACTCTCTATATCTAATGT-----------GATTGT------GTGCGTGTG--------TGTGTGTAATTTTGGCTGTAA------------------ATCTGGTT
droWil2 scf2_1100000004902:9510912-9511120 - CGTGTG------TGTGTGTAC----------------------------------------------------------------------------------------GTGCGTTGGGG----------------ATATTTGTTTTTAGAGG----TGAC----TTTCCACTTCTGCTG------------TTTCTGCTGTTGCT-GCTGCTGCTGCTCCTTGGAGGCTACAAGTA------------------TCTGTAT-----CTGTTT--------------------------------------------------------------------------------------------------------TGCGATTGCCTCTGTCTATAT--AT--ATGTGT---------------------------------------------------------------GTGT-CGGTGT-----------GTCTCTGTCTGTGTGTGTGTGTGTGTGAAAGCGTTGG-TGTCGTGTGCAA------------------A------T
droVir3 scaffold_11522:268-431 - TGTCTG------TCTGTCTCTC---T------------------------------------------------------------------------------------------------------------------------------------GTC----TCTCT------------------------------------------------------------------GTCTCT------------------------CTGTCTC---------------------------TCT--------G-----TCTCTC--TGTCTGTA----T--------------------GTCTG------TGTGTCTGTGTGTCTGTGTGTCTGTGTGTCTGT--GTGTCTGTCT----G-------------------------------------------------TCTGTCTGT-CTGTGT-----------GTCTGTGT----GT--CTGTG--------TGTCTGTG-TGCTGTCTGTCT------------------GTCTGTGT
droMoj3 scaffold_6680:20040764-20041005 - GGTCCG------CTTC--TGTTGTGT---GTACCGC-TTGAGACTTAAATTTACATCAAATATACGAGCTGGAC-----GCTTT-------------------------TTACTCTGGAG----------------TAGTTCT------------CCTGAA----ACTTT------------------------------------------------------------------AGCTCC----------------------C-TTTATGA---------TACTTTGGTGCATTTTGTCATTA-TTTAAATTA----------TGA----------CAGCTTGGCT-GTGGATG-TGTG--------------T------------GTGTGTGTGT--GTGTGTGTGTGTGT-----------------------------------------------------------GTGT-GTGTGT-----------GTGTGTG--T--GT--GTGTG--------TGTGTGTG-TGTTTGGTGTGA------------------GTTTAG--
droGri2 scaffold_15203:3902031-3902185 + GCTGCA------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTATTTTGCCACATTTTCGCATTATTTTCCCA---------------------------A----------C-----TTTATG--TGTGTATATGT---------GTGTGTGTG---TGTG--TGTGTGTGTGTGTGTGT--------GTGTGTGTGT--GT--GTGTGTGT----------------------------------------------------------------------GT-----------GTG------TGTGTGTGTGTG--------TGTGTGTTCGTGTGTGTGTGT------------------GTGTGTGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GATCCT------TTTGGCTATCGCTT---GCAGTGCATCGGAACTTGCGTCGGCCGTGTGTAAGTGAACTCGAC-----AATTG-------------------------GTGCTTCGCAG----------------TTATTTG------------CCTAAT----TCTCC------------------------------------------------------------------ATCTCT------------------------TTTGTTT---------------------------TAC--------C-----CATCTC--TGTCTTAA----TCCACCTTGTTGGTG----TTGTG------------TGTGTGCGATTGTCTCTTTGCGTAC--GT--GTGTGTGTGTGTGTGTC-------------------------------------------------TCTCTGT-CAATGT-----------GCTTTTGTT----T--GTGTG--------TGTGTGCG-TGTTGGCTGTAA------------------ATCTGGTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................T---GCAGTGCATCGGAACTTGCGTCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300000011010000000
...................................CATCGGAACTTGCGTCGGCCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
...........................................................GTAAGTGAACTCGAC-----AATTG-------------------------GTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TG------------TGTGTGCGATTGTCTC......................................................................................................................................................................................1811.00100000000010000000
...........................................................................................................................................................................................................................................................................................................................................................TGGTG----TTGTG------------TGTGTGCGATT...........................................................................................................................................................................................2111.00100000000001000000
...............................AGTGCATCGGAACTTGCGTCGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
.................................................TCGGCCGTGTGTAAGTGAACTCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.............................................................AAGTGAACTCGAC-----AATTG-------------------------GTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCG-TGTTGGCTGTAA------------------ATC.....2011.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCTCTTTGCGTAC--GT--GTGTGT.................................................................................................................................................................2111.00100000000001000000
......................................CGGAACTTGCGTCGGCCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
.........................T---GCAGTGCATCGGAACTTGCGTCGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000000000000000
....................................ATCGGAACTTGCGTCGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GTGCGATTGTCTCTTTGCGTA..............................................................................................................................................................................2111.00110000000000000000
.............TTGGCTATCGCTT---GCAGTGCATCGGAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
..................................GCATCGGAACTTGCGTCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.......................CTT---GCAGTGCATCGGAACTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000010000
...............................................................GTGAACTCGAC-----AATTG-------------------------GTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
..............................CAGTGCATCGGAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------TGTGTGCG-TGTTGGC...............................1670.14100000000001000000
..........................................ACTTGCGTCGGCCGTGTTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.13110000000000000000
droSec2
GATCCT------TTTGGCTATCGCTT---GCAGTGCATCGGAACTTGCGTCGGCCGTGTGTAAGTGAACTCGAC-----AATTG-------------------------GTGCTTCGCAG----------------TTATTTG------------CCTATT----TCTCC------------------------------------------------------------------ATCTCT------------------------TTTGTTT---------------------------TAC--------C-----CATCTC--TGTCTTAA----TCCACCTTGTTGGTG----TTGTG------------TGTGTGCGATTCTCTCTTTGCGTAC--GT--GTGTGTGT--------C-------------------------------------------------TCTCTGT-CAATGT-----------GCTTTTGTT----T--GTGTG--------TGTGTGCG-TGTTGACTGTAA------------------ATCTGGTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTGTT----T--GTGTG--------TGTGTGC........................................2111.0010010
........................TT---GCAGTGCATCGGAACTTGCGTCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
..TCCT------TTTGGCTATCGCTT---GCAGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
............TTTGGCTATCGCTT---GCAGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
....CT------TTTGGCTATCGCTT---GCAGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
GATCCT------TTTGGCTATCGCTT---GCAGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
.......................................GGAACTTGCGTCGGCCGTGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
..............TGGCTATCGCTT---GCAGTGCATCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
........................................GAACTTGCGTCGGCCGTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
dm3
GATCCT------TTTGGCCATCACTT---GCAGTGCATCGGAACTTGCGTCGGCCGTGTGTAAGTGAACTCGAC-----AATGG-------------------------GTGCTTCGCAG----------------TTATTTG------------CTTATT----TCTCC------------------------------------------------------------------ATCTCT------------------------TTTGTTT---------------------------TAC--------C-----CATCTC--TGTCTTAA----TCCACCTTGTTGGTG----TTGTGTG------TGTGTGTGTGCGATTGTCTCTTTGCGTAC--GT--GTGTGTGTGT------G------------------------------------------------T-CTCTGT-CAATGT-----------GCTTTTGCTTGTAT--GCGTG--------TGTGTGTG-TGTTGGCTGTAA------------------ATCTGGTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................T---GCAGTGCATCGGAACTTGCGTCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2618.0080000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010500000
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...............................AGTGCATCGGAACTTGCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..................................................................................................................................................................................................................................................................................................................................................................................................CTCTTTGCGTAC--GT--GTGTGTGT...............................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CAGTGCATCGGAACTTGCGTCGGCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................GATTGTCTCTTTGCGTAC--GT--G......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CATCGGAACTTGCGTCGGCCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................GTGTGTGTGCGATTGTCTCTTT...................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AGTGCATCGGAACTTGCGTCGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................GATTGTCTCTTTGCGTAC--GT--T......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................TCACTT---GCAGTGCATCGGAACTTGCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTG-TGTTGGCTGTAA------------------ATCTGG..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTAT--GCGTG--------TGTGTGTG-T.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GCCGTGTGTAAGTGAACTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................TG------------CTTATT----TCTCC------------------------------------------------------------------ATCTCT------------------------TT...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GTTGGTG----TTGTGTG------TGTGT.....................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................TGTTGGTG----TTGTGTG------TGTGT.....................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................GCAGTGCATCGGAACTTGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................C--------C-----CATCTC--TGTCTTAA----TCCAC.....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................AACTTGCGTCGGCCGTGTGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................GAACTTGCGTCGGCCGTGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................ATCACTT---GCAGTGCATCGGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GATCCT------TTTGGCCATCAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ATCACTT---GCAGTGCATCGGAACTTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................CATCACTT---GCAGTGCATCGGAACTTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............TTGGCCATCACTT---GCAGTGCATCGGAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GCGATTGTCTCTTTGCGTAC--GT--GT.....................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CATCACTT---GCAGTGCATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GCAGTGCATCGGAACTTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CCATCACTT---GCAGTGCATCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGTGT------G------------------------------------------------T-CTCTGT-CAATGT-----------GC..........................................................................2111.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................G----TTGTGTG------TGTGTGTGTGCGATTGTC........................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TGTGTGCGATTGTCTCTTTGC.................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ATCACTT---GCAGTGCATCGGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTG-TGTTGGCTGTAA------------------ATCT....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TG------TGTGTGTGTGCGATTGTCT.......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GTGCGATTGTCTCTTTGCGT...............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................GAACTTGCGTCGGCCGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCTCTTTGCGTAC--GT--GTGTG..................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................T---GCAGTGCATCGGAACTTGCGTCGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-TGTTGGCTGTAA------------------ATCTGG..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................CTTATT----TCTCC------------------------------------------------------------------ATCTCT------------------------TTTG.............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................G------TGTGTGTGTGCGATTGTCTCC.....................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................CGATTGTCTCTTTGCGTAC--GT--.......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG--------TGTGTGTG-TGTTGGCTGTAA------------------........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CTT---GCAGTGCATCGGAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TGTTGGTG----TTGTGTG------TGT.......................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................CATCGGAACTTGCGTCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................C------------------------------------------------------------------ATCTCT------------------------TTTGTTT---------------------------TAC--------C-----CAT...........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTTGCTTGTAT--GCGTG--------TG.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CTCGAC-----AATGG-------------------------GTGCTTCGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGCGATTGTC........................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TGTAAGTGAACTCGAC-----AATGG-------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTAT--GCGTG--------TGTGTGTG-......................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..........................................ACTTGCGTCGGCCGTGTGTAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............GGCCATCACTT---GCAGTGCATCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................ATTGTCTCTTTGCGTAC--GT--GAA....................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CACTT---GCAGTGCATCGGAACTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TT---GCAGTGCATCGGAACTTGCGTCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TGGTG----TTGTGTG------TGTGTG....................................................................................................................................................................................................1831.0030000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
.....T------TTTGGCCATCACTT---GCAGTGCATCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGT-----------GCTTTTGCTTGTAT--GC..........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TTGTTT---------------------------TAC--------C-----CATCTC--TGTCT.................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ACTT---GCAGTGCATCGGAACTTGCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................T---------------------------TAC--------C-----CATCTC--TGTCTTAA----TC........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTTTGCGTAC--GT--GTGT...................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
........................................GAACTTGCGTCGGCCGTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGCGATTGTCTCTTTG..................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................AGTGCATCGGAACTTGCGTCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GTTGGTG----TTGTGTG------TGTGTGT...................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GCAGTGCATCGGAACTTGCGTCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGTGT------G------------------------------------------------T-CTCTGT-CAATGT-----------............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TTGTCTCTTTGCGTAC--GT--GTGTG..................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTTTGCGTAC--GT--GTGTGTG................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
......................ACTT---GCAGTGCATCGGAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTG-TGTTGGCTGTAA------------------ATCTG...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TGGTG----TTGTGTG------TGTGTGTGTGC...............................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTTTGCGTAC--GT--GTGTG..................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..................................GCATCGGAACTTGCGTCGGCCGTGTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GTGCATCGGAACTTGCGTCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....T------TTTGGCCATCACTT---GCAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................ACTTGCGTCGGCCGTGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................ACTT---GCAGTGCATCGGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAT--GCGTG--------TGTGTGTG-T.....................................2021.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................TATT----TCTCC------------------------------------------------------------------ATCTCT------------------------TTTGTTT---------------------------T..............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTG-TGTTGGCTGTAA------------------A.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TG------TGTGTGTGTGCGATTGT.........................................................................................................................................................................................1950.8040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000001000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--GCGTG--------TGTGTGTG-TGTTGG................................2130.6720000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTG--------TGTGTGTG-TGTTGGCTGT............................2130.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TGGTG----TTGTGTG------TGTGTGTG..................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TTTGCGTAC--GT--GTGTGTGT...............................................................................................................................................................1920.5010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TTTGCGTAC--GT--GTGTGT.................................................................................................................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAT--GCGTG--------TGTGTGTG-......................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TTGCGTAC--GT--GTGTGTGT...............................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAT--GCGTG--------TGTGTGTG-......................................18200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000100001000000000010000000000000000000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAT--GCGTG--------TGTGTGTG-TGT...................................21120.2530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------TGTGTGTG-TGTTGGCTG.............................1880.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GTG----TTGTGTG------TGTGTGTGTGC...............................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTG-TGTTGGCTGT............................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................G------TGTGTGTGTGCGATTGT.........................................................................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................GTG------TGTGTGTGTGCGATTGT.........................................................................................................................................................................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CGTAC--GT--GTGTGTGTGT------G------------------------------------------------T-....................................................................................................19110.1820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TGCGTAC--GT--GTGTGTGTGT------G------------------------------------------------T-....................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
droEre2
GATCCT------TTTAGCCATCGCTT---GCAGTGCATCGGAATTCGTGTCGGCCGTGTGTAAGTGAACTTGAA-----TATTG-------------------------GTGCTTCGCAG----------------TTATTTG------------CCTATT----TCTCA------------------------------------------------------------------ATCTCT------------------------TTTGTTT---------------------------TAT--------C-----CATCTC--TGTCTTCA----TCCACCTTGATGGTGTACG-TCTG--------------C-----------TTTTTGTCCCT--GT--GTGCATGTGT------G------------------------------------------------T-CTCTTT-CAATGT-----------GCTGTTGTT----T--GTGTG--------TG--------------TGTAA------------------ATCTGGTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................CATCGCTT---GCAGTGCATCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0021000100
.ATCCT------TTTAGCCATCGCTT---GCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
.............TTAGCCATCGCTT---GCAGTGCATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
GATCCT------TTTAGCCATCGCTT---GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................................GTGCATGTGT------G------------------------------------------------T-CTCTTT-CAATGT-----------............................................................................2411.0010001000
......................GCTT---GCAGTGCATCGGAATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
................................GTGCATCGGAATTCGTGTCGGCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGT-----------GCTGTTGTT----T--GTGTG--------TG--------------...............................2311.0010000100
droYak3
GATCCT------TTTGGCCGTCATTT---GCAGTGCATCGGAATTCGTGTCGGCCGTGTGTAAGTGAACTTGAT-----AATTG-------------------------GTGCTTCGCAG----------------TTATTTG------------CCTACT----TCTCT------------------------------------------------------------------ATCTCT------------------------TTTGTTT---------------------------TAC--------C-----CATCTC--TGTCTTTA----TCCACCTTTCTGGTGTG-----TGTG------TGTTTGCGTGCGTGTGTCTGTTTGCGCCC--GT--GTGCATGTGT----T-G------------------------------------------------TCTTCTGT-CAATGT-----------GCTTTTGTT----T--GTGTG--------CGTGTGTG-TGTTGGCTGTAA------------------ATCTGGTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............TTTGGCCGTCATTT---GCAGTGCATCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
............TTTGGCCGTCATTT---GCAGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
................................GTGCATCGGAATTCGTGTCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
......................ATTT---GCAGTGCATCGGAATTCGTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.......................................GGAATTCGTGTCGGCCGTGTTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
.........................T---GCAGTGCATCGGAATTCGTGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
........................TT---GCAGTGCATCGGAATTCGTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
..............................CAGTGCATCGGAATTCGTGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...................................CATCGGAATTCGTGTCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
..................CGTCATTT---GCAGTGCATCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...................GTCATTT---GCAGTGCATCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
GATCCT------TTTGGCCGTCATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
........................................GAATTCGTGTCGGCCGTGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.........................................AATTCGTGTCGGCCGTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................GTGTCTGTTTGCGCCC--GT--GTGCATGTGC----.........................................................................................................................................................2811.00100000010000
.............................GCAGTGCATCGGAATTCGTGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.................................................................GAACTTGAT-----AATTG-------------------------GTGCTTCGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.......................TTT---GCAGTGCATCGGAATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
......................ATTT---GCAGTGCATCGGAATTCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................TTTGCGTGCGTGTGTCTGTTTGCGCC..............................................................................................................................................................................2611.00101000000000
droEug1
GGTCCTTGTGATTTTGGCGATATTTT---GCAGTGC------------ATCAGCCGAGTGTAAGTGTAA--------CCAATTA-------------------------GTGTATCTCAG----TTAG-----ACAATA----------------CTTTTT----CAACT------------------------------------------------------------------ATCTCT------------------------TTTGTTT---------------------------TAC--------C-----TATCTCATTGTCTTCA----TCCAACTCGTTGGTG-----------------------------------------------------------------------------------------------------------------------------------T--GCTTTGTGTGCGTATG--T--GT--GAGTG--------AGTGTGAG-TGTTGGCTGTAA------------------ATCTGGTTSizeHit CountTotal NormTotal
No Reads
droBia1
GATCCT------TCTGGCCGTGCTCT---GCGGCGC------------CTCGGGCCTGTGTAAGTGCATCCGTG--GACGG-----------------------------CGAC-TGGA----------------AACACC-----TCGTCCTCGCCACCT----CCGCC------------------------------------------------------------------ATCTCT------------------------TTTGTTT---------------------------TAT--------C--CCACCTGCC--TGCCGTGG----TCTCCGCTGC----------------------------------------TCTCTGTGTGC--GTGTGTGTGTGTGT-----------------------------------------------------------GTGT-GTGTGT-----------GCGAGCG--A--GT--GCGGC--------TGTGTGCG-TGTTGGCTGTAA------------------ATCTGGTTSizeHit CountTotal NormTotal
No Reads
droTak1
GGTCCT------TTTGGCCATATTCT---GCACTGC------------ATCGGCCCTGTGTAAGTGCAATTGAC--CACGA---AGCGGAGTAA----------TCAGA---------------AGAG-----AAAAAAAA-----T----------TATC----CACAT------------------------------------------------------------------ATCTCT------------------------TTTGTTT---------------------------TAC--------------CATCTC--TGTCTTTG----CCCACCTCGCTGGTG----GTGTG------------CGTGTGT------------------------------GCCTGTGTGTGAG------------------------------------------------------------T-----------GAGTGAC--T--GT--GTGCG--------TGTGTGTG-TGTTGGCTGTAA------------------ATCTGGTTSizeHit CountTotal NormTotal
No Reads
droEle1
GATCCT------TTTGGCCTTG---TGCCATGTGGCTATTCCTGGCATATCGGCCTGGTGTAAGTGAAA--------CCTA----------------------------GTGAAATCCTGTAGACTAA-----ACAGT--AGCT------------------------------------------------------------------------------------------------CCCATTGCGCCAGATTTTCCATCCCTTTTACCT---------------------------T----------C-----TTTCTC--TGTCTTTATCCATCCACCTCGCTGGTG-----------------------------------------------------------------------------------------------------------------------------------T-----------GC----------GT--GTGTG--------AGTGTGTG-TGTTGGCTGTAA------------------ATCTGGTTSizeHit CountTotal NormTotal
No Reads
droRho1
TATCCT------TTTAGCCATATTTC---ACATGGCCATCCCCAGCACTTTGGCCGATTGTAAGTGAAA--------CAAA----------------------------GTGAATCCGAG-----TAA-----ACCAAA---------------------------CATT------------------------------------------------------------------ATCTCT------------------------TTTCTTT---------------------------CA--------------------C--TGTCTTAA-----CCACATT--TGGTG-----------------------------------------------------------------------------------------------------------------------------------T-----------GCGTGT------AT--ATGTG--------TGTGTGTG-TGTTGGCTGTAAATTTTTTTTTTTTTGTGTTTGCGC-GSizeHit CountTotal NormTotal
No Reads
droFic1
GATCAT------TTTGGCCATA---T---GCAGTGCGCTGCCCAGCACATCGGCATGGTGTAAGTGAATCCG--------ATTA-------------------------GAAAGCCGCAA---AAAGAACGGGAAAGGCGA-----G------------------AACCC------------------------------------------------------------------AACGCT------------------------TTTATTT---------------------------AGC--------A-----TTT------------C----CCCGATTCGCTCGTGTC-----TGTGTATGCGTGTGCGTGCGTGAGCGTCCGCCTGCGTGA--GT--GTATGTGTGT-----------------------------------------------------------------------------------------------TTTTTTT--------CCTCTTTTGGTGTGTGCCTTT------------------TTTTTTGTSizeHit CountTotal NormTotal
No Reads
droKik1
GGTCCT------TTTAGCCGTA---T---GCAGTTCGCTACACGGCGCGACGGCCAGGTGTAAGTGTCCTTCAGGAGCTAATTG-------------------------GGGAAACGC----------------------------TAACCCACATCCATT----CCGCT------------------------------------------------------------------GTCCTT--------------TTCT------CTTCCCC---------------------------TTG--------C-----CCTCTC--TGTCTT-A----TCCACCTCGGT---G-----------------------------------------------------------------------------------------------------------------------------------TGCGTGTTGTGTATATATA--T--GT--GTGTG--------TGTGTGTG-TGTTGACTGTAA------------------ATCTGGTTSizeHit CountTotal NormTotal
No Reads
droAna3
GATCCT------ATTAGCGGTG---T---GCGGTGCGTTCCAGAGTACGGCGGCCTGGTGTAAGTGTCA--------CTAA-------ACCGGAGTGTCCGTCTTCGT-----ATCCGGA----------------AAAGAACTCCTAATCCGTGC----CTCTTC----TCCCACACTC------------TTTTTTTTGTCGTT-TTTTTTCCT------------------------------------------------AT----CTCTCACTCTTTCTCTCTGCCTGGTCTTGTCTCTTTTTTACCTTT----------TGACTT-A----TCCACCTCGCTTGTT----------------------------------------------------------------------------------------------------------------------------------GT-----------GTC------T--GT--GTGTG--------TGTGTGTG-TGTTGGCTGTAA------------------ATCTGGTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................GTTCCAGAGTACGGCGGCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002101000
...............AGCGGTG---T---GCGGTGCGTTCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
GATCCT------ATTAGCGGTG---T---GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...CCT------ATTAGCGGTG---T---GCGGTGCGTTCCAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
...CCT------ATTAGCGGTG---T---GCGGTGCGTTCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
..................GGTG---T---GCGGTGCGTTCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..................GGTG---T---GCGGTGCGTTCCAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
................GCGGTG---T---GCGGTGCGTTCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
..................GGTG---T---GCGGTGCGTTCCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
................GCGGTG---T---GCGGTGCGTTCCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTG--------TGTGTGTG-TGTTGG................................19200.102000002
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------T--GT--GTGTG--------TGTGTGTG-TGTT..................................21200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTG--------TGTGTGTG-TGTTGG................................18200.051000001
droBip1
GATCCT------ATTAGCGGTG---T---GCGGTGCGCTCCAAAGTGCGGCGGCCTTGTGTAAGTGTCA--------CCAA-------AACGGAATA-TA---TCCGTG---------------TCCG-----GGAATATAACTTCTAATTCGTGT----TTCTTC----TCCTACACACACACTTCTTTTTTTTTTTTTTTCTTTATTTTTTCCT------------------------------------------------AT----CTCTTACTCTTTCTCACTGATACGTCTTGTCTCTT-TTTACCTTT----------TGTCTT-A----TCCACCTCGGTGGTT----GTGCC------------TGTGTGT----------------------------GTTT-----------------------------------------------------------------------------------GTGTGT------GTGTGTGTG--------AGTGTGTGTGTTTGGCTGTAA------------------ATCTGGTTSizeHit CountTotal NormTotal
No Reads
dp5
AATTCT------CCTTGCGATA---T---TCGGTGCAATTGAGATAACGTCGGCCAGGTGTAAGTTGGTGTGCA--TACGA---TTAAAATTGAATT-CT---GCCATA---------------TGAA-----ACAAAAGACGTCCC-------------------------------------------------------------------------------------AAATA------------------TTTG--------------------------------------------------------------------------------AACTTCTATGGTGCA-----TGTG------------TGT------------------------------GTGAGTGTGTGTACGTTTTCATCTTCCACTCTGTCCCTCCTCTGTCTATTTCTCTAGCACTCTCTATATCTAATGT-----------GATTGT------GTGCGTGTG--------TGTGTGTAATTTTGGCTGTAA------------------ATCTGGTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....T------CCTTGCGATA---T---TCGGTGCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATGT-----------GATTGT------GTGCGTGT........................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................TCTATGGTGCA-----TGTG------------TGT------------------------------GT.................................................................................................................................................................2011.0010000001000
.ATTCT------CCTTGCGATA---T---TCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
.ATTCT------CCTTGCGATA---T---TCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...................................CAATTGAGATAACGTCGGCCAGGTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTAATTTTGGCTGTAA------------------AT......2211.0010010000000
....................................AATTGAGATAACGTCGGCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.....T------CCTTGCGATA---T---TCGGTGCAATTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
AATTCT------CCTTGCGATA---T---TCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000001
..................GATA---T---TCGGTGCAATTGAGATAACGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
................................................................TTGGTGTGCA--TACGA---TTAAAATTGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTAATGT-----------GATTGT------GTGCG...........................................................2111.0010100000000
........................................GAGATAACGTCGGCCAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010000000
..................................GCAATTGAGATAACGTCGGCCAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACTCTGTCCCTCCTCC........................................................................................................................1920.5010010000000
................................................................................................................................................................................................................................................................................................................................................................CA-----TGTG------------TGT------------------------------GTGAGTGTGTG........................................................................................................................................................2040.2510000001000
droPer2
AATTCT------CCTTGCGATA---T---TCGGTGCAATTGAGATAACGTCGGCCAGGTGTAAGTTGGTGTGCA--CACGA---TTAAAATTGAATT-CT---GCCATA---------------TGAA-----ACAAAAGACGTCCC-------------------------------------------------------------------------------------AAATA------------------TTTA-------------------------------------------------------------------------A----ATAACTTCTATGGTGCA-----TGTG------------TGT------------------------------GTGAGTGTGTGTACGTTTTCCTCTTCCACTCTGTCCCTTCTCTGTCTATTTCTCTAGCACTCTCTATATCTAATGT-----------GATTGT------GTGCGTGTG--------TGTGTGTAATTTTGGCTGTAA------------------ATCTGGTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................GCAATTGAGATAACGTCGGCCAGGGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.....................A---T---TCGGTGCAATTGAGATAACGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
....................................AATTGAGATAACGTCGGCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
....................................AATTGAGATAACGTCGGCCAGGTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
droWil2
CGTGTG------TGTGTGTAC----------------------------------------------------------------------------------------GTGCGTTGGGG----------------ATATTTGTTTTTAGAGG----TGAC----TTTCCACTTCTGCTG------------TTTCTGCTGTTGCT-GCTGCTGCTGCTCCTTGGAGGCTACAAGTA------------------TCTGTAT-----CTGTTT--------------------------------------------------------------------------------------------------------TGCGATTGCCTCTGTCTATAT--AT--ATGTGT---------------------------------------------------------------GTGT-CGGTGT-----------GTCTCTGTCTGTGTGTGTGTGTGTGTGAAAGCGTTGG-TGTCGTGTGCAA------------------A------TSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................AT-----CTGTTT--------------------------------------------------------------------------------------------------------TGCGATTGCC........................................................................................................................................................................................1811.00100010
droVir3
TGTCTG------TCTGTCTCTC---T------------------------------------------------------------------------------------------------------------------------------------GTC----TCTCT------------------------------------------------------------------GTCTCT------------------------CTGTCTC---------------------------TCT--------G-----TCTCTC--TGTCTGTA----T--------------------GTCTG------TGTGTCTGTGTGTCTGTGTGTCTGTGTGTCTGT--GTGTCTGTCT----G-------------------------------------------------TCTGTCTGT-CTGTGT-----------GTCTGTGT----GT--CTGTG--------TGTCTGTG-TGCTGTCTGTCT------------------GTCTGTGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................CTG------TGTGTCTGTGTGTCTG..........................................................................................................................................................................................19200.102000000200000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TCTG------TGTGTCTGTGTGTCTGTG........................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
GGTCCG------CTTC--TGTTGTGT---GTACCGC-TTGAGACTTAAATTTACATCAAATATACGAGCTGGAC-----GCTTT-------------------------TTACTCTGGAG----------------TAGTTCT------------CCTGAA----ACTTT------------------------------------------------------------------AGCTCC----------------------C-TTTATGA---------TACTTTGGTGCATTTTGTCATTA-TTTAAATTA----------TGA----------CAGCTTGGCT-GTGGATG-TGTG--------------T------------GTGTGTGTGT--GTGTGTGTGTGTGT-----------------------------------------------------------GTGT-GTGTGT-----------GTGTGTG--T--GT--GTGTG--------TGTGTGTG-TGTTTGGTGTGA------------------GTTTAG--SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GCTGCA------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTATTTTGCCACATTTTCGCATTATTTTCCCA---------------------------A----------C-----TTTATG--TGTGTATATGT---------GTGTGTGTG---TGTG--TGTGTGTGTGTGTGTGT--------GTGTGTGTGT--GT--GTGTGTGT----------------------------------------------------------------------GT-----------GTG------TGTGTGTGTGTG--------TGTGTGTTCGTGTGTGTGTGT------------------GTGTGTGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................................................................................................................................................................................................................................................................................................................TATATGT---------GTGTGTGTG---TGTG--T...............................................................................................................................................................................................................21200.05110
............................................................................................................................................................................................................................................................................................................................................................................GTGTGTGTGTGTGTGT--------GTGTG..................................................................................................................................................................................21200.05101

Generated: 05/18/2015 at 09:42 AM