ID:

dsi_28683

 Coordinate:

3r:12312842-12313088 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.2 -29.0 -29.0

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
(CTATA)nSimple_repeatSimple_repeat+

Sense Strand Reads

AGTACATTTATTTGAGTCAGTTGCAAACAAAGGCTCGTTCGCTTCGGGTGGTAAGTTAGTTCTATTCTAAATGCTACATAACACCACGTACGGATTAGCAAACCTACGCAGCTACAAGATACATTTACAGATTGATTTTAGGTTTTTAGTTCGCTTGCTACTCGCACTTTTAAAACATGTTTACGTTTACAACGCTCAGATATAGTATATAGTATATATAGTATAGTATAGTTAGTAAAGTACTTGTAGGGTTGGTATGTTTCGGTTTTCGTTTTGTAAAATTCCTCTTTTTTCTAGCATTATAACACATTTCTGCAGAGTACTAGCTAACGTTTGGATTTTCGCTA
****************************************************************************((((.((((.((((.((.........))))))...(((((((.(((.(((((.(((((.....((((...((((......))))...)).))...............((((...))))......((((.((((((...)))))).))))...))))).))))))))))))))))).)).))))**************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR618934
dsim w501 ovaries
 M024
male body		 M053
female body
 O001
Testis
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
.................................................................................................................................................................................................................................................................TGTTTCGGATTTGGTTTTGTAAG................................................................... 23 3 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................AGTACTTGTAGGGTTGGTATG........................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................CATAACACCACGTACGGATTA.......................................................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 1 0 0 0 0 1 0 0 0 0
.........................................................................CTACATAACACCACGTACGGA............................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GTTGGTAAAGTACTTGTAGGG................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................GTAGGGTTGGTATGTTTCGGT................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................TTTCTGCAGAGTACTAGGCTA................. 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................CTACTCGCACTTTTAAAACAT......................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................TACTTGTAGGGTTGGTATGTT...................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................TACAAGATACATTTACAGAT....................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................ACATAACACCACGTACGGATT........................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TTAGTTCGCTTGCTACTCGCA..................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................AAAGTACTTGTAGGGTTGGTA.......................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
................................GCTCGTTCGCTTAGGG........................................................................................................................................................................................................................................................................................................... 16 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................TGCAAACAAAGGCTCGTTCG.................................................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................GTTCGCTTGCTACTCGCACTT.................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................CGCAGCTACAAGATACATTTAC........................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AAAACATGTTTACGTTTACAAAA......................................................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................GTACTTGTAGGGTTGGTATG........................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................................AAGTACTTGTAGGGTTGGTA.......................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............GTCAGTTGCAAACAAAGGCTC....................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................TTGGTATGTTTCGGTTTTCG............................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................CATTTACAGATTGATTTTCGG............................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................ACGTACGGATTAGCAAACCT.................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................................................TGCTTGTAGGGTTGGTATG........................................................................................ 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TATAGTATATATGGTATAGTA....................................................................................................................... 21 1 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0
.........ATTTGAGTGAGTTGCGAAC............................................................................................................................................................................................................................................................................................................................... 19 2 3 0.67 2 0 0 0 0 0 0 0 2 0 0 0 0
.................................................................................................................................GATTGATTTTCGGTTTTTAG...................................................................................................................................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................TTCTGCAGAGTACTAGGCTA................. 20 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................TGTTTTGGATTTGGTTTTGTAAA................................................................... 23 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................AAGGCTCGTCCGCTCAGGG........................................................................................................................................................................................................................................................................................................... 19 3 11 0.18 2 0 0 0 2 0 0 0 0 0 0 0 0
.............................AAGGCTCGTTCGCTC............................................................................................................................................................................................................................................................................................................... 15 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TAGTATATAGTGTAGATAGCA............................................................................................................................ 21 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................................................................TTTATGTTCACAACGCTCGG.................................................................................................................................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0 0
.........ATTTGAGTGAGTTGCGAACT.............................................................................................................................................................................................................................................................................................................................. 20 3 12 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................................................................TGTCGGTGTTCGTTTTGGAA.................................................................... 20 3 17 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

TCATGTAAATAAACTCAGTCAACGTTTGTTTCCGAGCAAGCGAAGCCCACCATTCAATCAAGATAAGATTTACGATGTATTGTGGTGCATGCCTAATCGTTTGGATGCGTCGATGTTCTATGTAAATGTCTAACTAAAATCCAAAAATCAAGCGAACGATGAGCGTGAAAATTTTGTACAAATGCAAATGTTGCGAGTCTATATCATATATCATATATATCATATCATATCAATCATTTCATGAACATCCCAACCATACAAAGCCAAAAGCAAAACATTTTAAGGAGAAAAAAGATCGTAATATTGTGTAAAGACGTCTCATGATCGATTGCAAACCTAAAAGCGAT
****************************************************************************************((((.((((.((((.((.........))))))...(((((((.(((.(((((.(((((.....((((...((((......))))...)).))...............((((...))))......((((.((((((...)))))).))))...))))).))))))))))))))))).)).))))**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 M023
head
 M025
embryo
 M053
female body
 M024
male body		 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 O002
Head
 O001
Testis
 GSM343915
embryo
.....................................................................................................................................................................................ATGCAAATGTTGCGAGTCTATATCAT............................................................................................................................................ 26 0 1 25.00 25 14 10 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................TTACGATGTATTGTGGTGCATGCCT............................................................................................................................................................................................................................................................. 25 0 1 24.00 24 16 7 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................ATGCAAATGTTGCGAGTCTATATCATAT.......................................................................................................................................... 28 0 1 20.00 20 8 10 0 0 0 0 0 1 0 1 0 0 0 0
.....................................................TCAATCAAGATAAGATTTACGATGTAT........................................................................................................................................................................................................................................................................... 27 0 1 15.00 15 10 3 1 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................AGACGTCTCATGATCGATTGCAAACCT......... 27 0 1 12.00 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................AGAAAAAAGATCGTAATATTGTGTAA.................................... 26 0 1 9.00 9 4 5 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................ATGCAAATGTTGCGAGTCTATATCATATAT........................................................................................................................................ 30 0 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................GACGTCTCATGATCGATTGCAAACCT......... 26 0 1 7.00 7 6 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................CATTTCATGAACATCCCAACCATACAA...................................................................................... 27 0 1 7.00 7 0 0 7 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................AATATTGTGTAAAGACGTCTCATGAT...................... 26 0 1 6.00 6 0 1 4 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................TTGTGTAAAGACGTCTCATGATCCGA.................. 26 3 1 6.00 6 0 1 2 0 3 0 0 0 0 0 0 0 0 0
.....................................................................TTACGATGTATTGTGGTGCATGCCTAAT.......................................................................................................................................................................................................................................................... 28 0 1 6.00 6 3 3 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................TTGTGTAAAGACGTCTCATGATCGAT.................. 26 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TGCGAGTCTATATCATATATCATATAT................................................................................................................................. 27 0 1 4.00 4 0 0 3 0 0 0 0 0 0 0 1 0 0 0
..........................................................CAAGATAAGATTTACGATGTATTGTGGT..................................................................................................................................................................................................................................................................... 28 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................TGTGTAAAGACGTCTCATGATCCGAT................. 26 3 1 4.00 4 0 3 1 0 0 0 0 0 0 0 0 0 0 0
...........................................AGCCCACCATTCAATCAAGATAAGAT...................................................................................................................................................................................................................................................................................... 26 0 1 4.00 4 2 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................TGTGTAAAGACGTCTCATGATCGAT.................. 25 0 1 4.00 4 3 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................TCAATCAAGATAAGATTTACGATGT............................................................................................................................................................................................................................................................................. 25 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................TTGTGTAAAGACGTCTCATGATCCGAT................. 27 3 1 3.00 3 0 2 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................TTTAAGGAGAAAAAAGATCGTAATAT........................................... 26 0 1 3.00 3 0 0 1 2 0 0 0 0 0 0 0 0 0 0
................................................................AAGATTTACGATGTATTGTGGTGCATGCCT............................................................................................................................................................................................................................................................. 30 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................AAAGACGTCTCATGATCGATTGCAAACCT......... 29 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................TTCATGAACATCCCAACCATACAA...................................................................................... 24 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
.....................................................TCAATCAAGATAAGATTTACGATGTA............................................................................................................................................................................................................................................................................ 26 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AAGATTTACGATGTATTGTGGTGCAT................................................................................................................................................................................................................................................................. 26 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AAAAGCCAAAAATCAAGCGAACGATGAGC....................................................................................................................................................................................... 29 1 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................ATGTTGCGAGTCTATATCATATATCATAT................................................................................................................................... 29 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................ATATTGTGTAAAGACGTCTCATGAT...................... 25 0 1 3.00 3 2 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................AATCATTTCATGAACATCCCAACCATAC........................................................................................ 28 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................ATTGTGTAAAGACGTCTCATGATCGAT.................. 27 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................AGCCCACCATTCAATCAAGATAAGATT..................................................................................................................................................................................................................................................................................... 27 0 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................ACAAATGCAAATGTTGCGAGTCTATAT............................................................................................................................................... 27 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................GCAAATGTTGCGAGTCTATATCATATATCAT..................................................................................................................................... 31 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................CGTAATATTGTGTAAAGACGTCTCATGAT...................... 29 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................CATCCCAACCATACAAAGCCAAAAGC............................................................................ 26 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................ATGCAAATGTTGCGAGTCTAT................................................................................................................................................. 21 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................AGAAAAAAGATCGTAATATTGTGTAAAGA................................. 29 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TTACGATGTATTGTGGTGCATGCCTA............................................................................................................................................................................................................................................................ 26 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................AGCCCACCATTCAATCAAGAT........................................................................................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................ATTGTGTAAAGACGTCTCATGATCCGAT................. 28 3 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................TTAAGGAGAAAAAAGATCGTAATAT........................................... 25 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................AGGAGAAAAAAGATCGTAATATTGTGT...................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................ACGTAATATTGTGTAAAGACGTCTCAT......................... 27 1 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................AAATGTCTAACTAAAATCCAAAAAT....................................................................................................................................................................................................... 25 0 1 2.00 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................AGCCCACCATTCAATCAAGATAAGATTT.................................................................................................................................................................................................................................................................................... 28 0 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................AGCCAAAAATCAAGCGAACGATGAGC....................................................................................................................................................................................... 26 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AAATGTTGCGAGTCTATATCATATAT........................................................................................................................................ 26 0 1 2.00 2 0 0 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................CATTTCATGAACATCCCAACCATACA....................................................................................... 26 0 1 2.00 2 0 0 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................TTGGATGCGTCGATGTTCTATGTAAATGT.......................................................................................................................................................................................................................... 29 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................CGTAATATTGTGTAAAGACGTCTCAT......................... 26 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................GTGTAAAGACGTCTCATGATCGAT.................. 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................ATGTAAATGTCTAACTAAAATCCAAAAAT....................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................AAATATTGTGTAAAGACGTCTCATGAT...................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................CAAGCGAAGCCCACCATTCAATCAAGATA.......................................................................................................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................GAGTCTATATCATATATCATA.................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................CAAGCGAACGATGAGCGTGAAAATTTTGT.......................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................GATTTACGATGTATTGTGGTGCATGCCT............................................................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................GTAAATGTCTGACTAAAACCCAAAAAT....................................................................................................................................................................................................... 27 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................................AATCATTTCATGAACATCCCAACCAT.......................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................CCAACCATACAAAGCCAAAAGCAAAACAT..................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................CAAGATAAGATTTACGATGTATTGTGGTGC................................................................................................................................................................................................................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................ACATCCCAACCATACAAAGCCAAAAGC............................................................................ 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................AACATTTTAAGGAGAAAAAAGATCGT................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GGATGCGTCGATGTTCTATGTAAATGT.......................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CAATCAAGATAAGATTTACGATGTATT.......................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TGCAAATGTTGCGAGTCTATATCATATAT........................................................................................................................................ 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................ATGCAAGTGTTGCGAGTCTATATCAT............................................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................AAGGAGAAAAAAGATCGTAATATTGT........................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................AAGATAAGATTTACGATGTATTGTGGTGC................................................................................................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TCAAGATAAGATTTACGATGTATTGTGGT..................................................................................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ATCATATCAATCATTTCATGAACAT................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................GCAAGCGAAGCCCACCATTCAATCAAGAT........................................................................................................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................AATATTGTTTAAAGACGTCTCATGATCGAT.................. 30 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................CATTTCATGAACATCCCAACCATA......................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................GTCAACGTTTGTTTCCGAG....................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................AAAAGCCAAAAATCAAGCGAACGA............................................................................................................................................................................................ 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................TTTAAGGAGAAAAAAGATCGGAATAT........................................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................TCAAGATAAGATTTACGATGTATTGT........................................................................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................TCTCATGATCGATTGCAAACC.......... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................TCAATCAAGATAAGATTTACGATGTATT.......................................................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................TAAAAGCCAAAAATCAAGCGAACGATGAGC....................................................................................................................................................................................... 30 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................TAAGGAGAAAAAAGATCGTAATAT........................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................AATTTCATGAACATCCCAACCATA......................................................................................... 24 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................ATCAAGATAAGATTTACGATGTAT........................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................TGTGTAAAGACGTCTCATGATCGATT................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CAATCATTTCATGAACATCCCAACCAT.......................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................AGCCCACCATTCAATCAAGATA.......................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................AAGACGTCTCATGATCGATTGCAAA............ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................................AATGAACATCCCAACCATACAAAGCCA................................................................................. 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................TTTCATGAACATCCCAACCATACAA...................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........TAAACTCAGTCAACGTTTGT.............................................................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................TGCGTCGATGTTCTATGTAA.............................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................CCATTCAATCAAGATAAGATT..................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................CGAAGCCCACCATTCAATCAAGATAAGAT...................................................................................................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................CCAAAAATCAAGCGAACGATGAGCGT..................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................CAAGCGAACGATGAGCGTGAAAATTT............................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................GGCAAGCGAACGATGAGCGTGAAAA................................................................................................................................................................................ 25 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................TTACCATGTATTGTGGTGCATGCCT............................................................................................................................................................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TTGTACAAATGCAAATGTTGCGAGT..................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................................ATTGTGTAAAGACGTCTCATGATCGT................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................AAAACGTCTCATGATCGATTGCAAACCT......... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................GCCTAATCGTTTGGATGCGT............................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................AATTGTGTAAAGACGTCTCAAGATC..................... 25 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................TTCCGAGCAAGCGAAGCCCACCATTCAAT................................................................................................................................................................................................................................................................................................. 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................AAGACGTCTCATGATCGATTGCAAACCT......... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................AAAAGCCCACCATTCAATCAAGATAAGAT...................................................................................................................................................................................................................................................................................... 29 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TTGCGATGTATTGTGGTGCATGCCT............................................................................................................................................................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................AGAAAAAAGATCGTAATATTGTGT...................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................ATGTTGCGAGTCTATATCATATATCAT..................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................GCGAAGCCCACCATTCAATCAAGATAAGAT...................................................................................................................................................................................................................................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................GCGAAGCCCACCATTCAATCA............................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................GAACATCCCAACCATACAAAGCCAAAAGC............................................................................ 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................CGAAGCCCACCATTCAATCAAGATA.......................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....GTAAATGAACTCAGTCGGCGTTT................................................................................................................................................................................................................................................................................................................................ 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................GTGTAAAGACGTCTCATGATCCGAT................. 25 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................AATCCAAAAATCAAGCGAAC.............................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..........AAACTCAGTCAACGTTTGTTTCCGAGCA..................................................................................................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................TCTCATGAGCGAGTGCAATCC.......... 21 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................ACGTCTCATGATCGATTGCAA............. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................CGTTTGGATGCGTCGATGT....................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................ATGCGTCGATGTTCTATGTAAATGTCT........................................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................GCAAATGTTGCGAGTCTATATCATATAT........................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................ATCAAGCGAACGATGAGCG...................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................ATTGTGTAAAGACGTCTCATGATCCGA.................. 27 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................CAAATGTTGCGAGTCCAT................................................................................................................................................. 18 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................ATCGTTTGGATGCGTCGATGTTCTATG................................................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................AGGAGAAAAAAGATCGTAATAT........................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................GTTCTATGTAAATGTCTAACTAAAAT............................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................AAAAGATCGTAATAT........................................... 15 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................ATGCAAATGTTGCGAGTCTATATCATATA......................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................TTGTGTAAAGACGTCTCATGATCGA................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................AGATAAGATTTACGATGTATTGTGGT..................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................TTTAAGGAGAAAAAAGATCGTAATA............................................ 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........ATAAACTCAGTCAACGTTTGTTTCCGA........................................................................................................................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................TGTGGTGCATGCCTAATCGTTTGGAT................................................................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TTACGATGTATTGTGGTGCATGCCG............................................................................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TTACGATGTAGTGTGGTGCATGCCT............................................................................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............CTCAGTCAACGTTTGTTTCC.......................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................TGAGCGTGAAAATTTTGTACAAATG................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................CAAGCGAACGATGAGCGTGAAAATT.............................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................CAAAAGCAAAACATTTTAAGGAGAAAA........................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................ATTGTGTAAAGACGTCTCATGATCGATT................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TTGCGAGTCTATATCATATAT........................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................TCAACGTTTGTTTCCGAGCAA.................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................AGCCAAAAGCAAAACATTTTAAGGAGA........................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................ACAAATGCAAATGTTGCGAGTCTAT................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................CGTCTCATGATCGATTGCAAA............ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................................ACGATGTATTGTGGTGCATGCCTAAT.......................................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................GTTGCGAGTCTATATCATATATCAT..................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TGTTGCGAGTCTATATCATATATCAT..................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................TGTAAAGACGTCTCATGATC..................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................GCGTCGATGTTCTATGTAAATGTCT........................................................................................................................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................TTTAAGGAGAAAAAAGATCGTAAT............................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................AATCATTTCATGAACATCCCAACCATA......................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................AAGATTTACGATGTATTGTGGTGC................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................CGTCGATGTTCTATGTAAA............................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................TGTGGTGCATGCCTAATCGT....................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...................................................ATTCAATCAAGATAAGATTTACGAT............................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GAACGATGAGCGTGAAAATT.............................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...................................................................................................................................................................................................................................................................................................................GTAAAGACGTCTCATGATCGATTGCAAAC........... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................AGTCAACGTTTGTTTCCGAGC...................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................AGACGTCTCATGATCGATTGCAAACCTA........ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................AGATTTACGATGTATTGTGGTGCAT................................................................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................TTGTGTAAAGACGTCTCATGATCGATT................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................AATCAAGCGGACGATGAGCGT..................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................AAGATAAGATTTACGATGTATTGTGGT..................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AAGATTTACGATGTATTGTGGTGCATGC............................................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................AACATCCCAACCATACAAAGCCA................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................AGATGTCTCATGATCGATTGCAAACCT......... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................AAGGAGAAAAAAGATCG................................................. 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................GAAGCCCACCATTCAATCAAGATAAGAT...................................................................................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................ACAAATGCAAATGTTGCGAGTCTATATC.............................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................TTTACGATGTATTGTGGTGCATGCCT............................................................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................CGTTTGGATGCGTCGATGTTCTAT.................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................CGTCTCATGATCGATTGCAAACCT......... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........ATAAACTCAGTCAACGTTTGTT............................................................................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................GTTGCGAGTCTATATCATATA......................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................CCTAATCGGTTGGAAGC............................................................................................................................................................................................................................................... 17 2 7 0.71 5 0 0 0 5 0 0 0 0 0 0 0 0 0 0
...............................................CACCATACAATCGAGATCAGA....................................................................................................................................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
........................................................................................................ATGGGTCGATGTTCGAAGT................................................................................................................................................................................................................................ 19 3 20 0.25 5 0 5 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................ATGTTGGGAGTTTACATCA............................................................................................................................................. 19 3 17 0.18 3 0 0 1 0 0 1 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................CGAGTCTAGATCTTATAT........................................................................................................................................ 18 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................TTCGTTTCCGATAAAGCGAA............................................................................................................................................................................................................................................................................................................... 20 3 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................ATAAGATCTACGATG.............................................................................................................................................................................................................................................................................. 15 1 9 0.11 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................TGAAAATTTTGAACACATG................................................................................................................................................................... 19 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................................................................ATGTTGGGAGTCTGTAT............................................................................................................................................... 17 2 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................CGAAGCGCAACATTCAA.................................................................................................................................................................................................................................................................................................. 17 2 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:12312792-12313138 - dsi_28683 AGTACATTTAT--TTGAGTCAGTTGCA--------AACAAAG---GCT--C----GTTCG-------CTTCGGGTGGT----------AAGTTA--GTTCTATTCTAAATGCTACAT--AACACCACG-TACGGATTAGCA-AACCTACGCAGCTA-------------CAAGATACATTTACAGATTGATTTTAGGTTTTTAGTT--------CGCTT-------GC-----TACTCGCACTTTTAAAACAT-G--------T-TTACGTTTACAACGCTCAGATATA---GTA-----TATAGTATATATAGTATAGTAT----AGTTAGT------------AAAGTACTTGTA---------GGGTTGGTAT------GTTT-----CGGTTTTCGTTT-------------------------------------TGTAAAATTCCTCTTTTT--T------CTAGC--------A----------------------TTATAACACAT----------------------------------------------------------T--TCTGCAG-AGTACTAG-CTAAC-G------------T--------TTGGAT---TTTC-GCTA
droSec2 scaffold_0:13144231-13144571 - AGTACATTTAT--TTGAGTCAGTTGCA--------AACAAAG---GCT--C----GTTCG-------CTTCGGGTGGT----------AAGTTA--GTTCTATTCAAAATGCTACAT--AACACCACG-TACGGATTAGCA-AACCTACGCAGCTA-------------CAAGATACATTTACAGATTGATTTTGGGGTTTTAGTT--------CGCTT-------GC-----TACTTGCACTTTTAAAACAT-G--------T-TTACGTTTACAACGCTCAGATATA---GTA-----TATAGTATATA-----TAGTAT----AGTTAGT------------AAAGTACTTGTG---------G-GTTGGTAT------GTTT-----CGGTTTTCGTTT-------------------------------------TGTAAAATTCCTCTTTTT--T------CTAGC--------A----------------------TTATAACACAT----------------------------------------------------------T--TCTTCAG-AGTACTAT-CTAAC-G------------T--------TTGGAT---TTTC-GCTA
dm3 chr3R:8852055-8852409 + AGTACATTTAT--TTGAGTCAGTTGCA--------AACAAAG---GAT--C----GTTCG-------CTTCGGGTGGT----------AAGTTA--GTTCTATTCTAAATGCTACAT--AACACCACG-TACGGATTAGCA-AACCTACGCA-----------TGCGT-CATGATACATTTACAGACTGATTTTGGGTTTTTAGTT--------CGCTT-------GC-----TACTCGCACTTTTAAAACAT-G--------T-TTACGTTTACAACGCTCAGATATA---GTATA---TATAGT---------ATAGTAT----AGTTAGT------------AAAGTACTTGTA---------GGTTTGGTAT------GTTT-----CGCTTTTCGTTT-------------------------------------TGTAAAATTCCTCTTTTTT-T---------------------CTAGCTTTAGTT---ATACACTTATAACACA----------------------------------------------------------AT--TCTGCAG-AGTACTAG-CTAAC-G-----------AC--------TTGGAA---TTTC-GCTG
droEre2 scaffold_4770:12796605-12796966 - AGTACATTTAT--TTGAGTCAGTTGCA--------AACAAAG---GAT--C----GTTTG-------CTTCGGGTGGT----------AAG------TTCTATTCTAAATGCTACAT--AACACCATG-TACGGATTAGCA-AGCCTACGCAGCTACTAATCATGCGT-CAAGATACATTTACAGACTGAT--------TTTAGTT--------CGCTTGCTT---GC-----TTTTCGCACTTTTAAAACAT-G--------T-TTACGTTTACAACGCTCAGATATA-------------TAG--------------TAT----AGGTAAT------------AAAGTACTTATA---------GGGTTGGTAT------GTTT-----CGGTTTTCGCTT-------------------------------------TGTAAAATTCCTCTTTT----------CTAGCATTATC--ATTTCGCATTAGTT---ATGCACTTATAACACACG------------------------------------------TA----CTGCCCCAGC--TCCGAAA-AATACTA-----AT-A------------T--------TTGGAT----TTC-GCTA
droYak3 3R:13147011-13147369 + AGTACATTTAT--TTGAGTCAGTTGCA--------AACAGAG---GCT--T----GTTTG-------CTTCGGGTGGT----------AAG------TTCTATTCTAAATGCTACAT--AACACCATG-TACGGATTAGCA-AACCTACGCAATTACTAATCATGCGT-CAAGATACAT--------------------TTTAGTA--------CGCTTGCTT---GC-----TATTCGCACTTTTAAAACAT-G--------T-TTACGTTTACAACGCTCAGATATATAGGTA-----TATAG--------------TAT----AGGTAAT------------AAAGTACTTGTA---------GGGTTGGTAT------GTTT-----CGGTTTTCGCTT-------------------------------------TGTAAAATTGCTCTTTTT----------TAGCATTACC--ATTTCGCATTAGTT---ATGCACTTATAACACACG------------------------------------------TA----CTGCCTCAAT--TCTGAAG-TGTACTA-----AC-A------------T--------TTGGAT---TTTC-GCTA
droEug1 scf7180000409802:1175107-1175503 - AGTACATTTAT--TTGAGTCGGTTACA--------AACAAAG---GCT--C----GTTTG-------CTTCGGGTGGT----------AAG------TTCTATTCTAAATGCTACATATAACACCATTTTACGGATCAGCA-AATCTACGCAGCTAATAATCATGCGTCCAAGTTGCAAATACAGACTGCT--------TGTAGTT--------CGCTT-------GG-----TATTCGTATTTGTTAAACATTTCTT-----T-GTACGTTTACAACGTTCAGATATA---GTA-----TATAG--------------TAT----ATGTAAT------------AAAGTACATGTA---------GGGTTGGTAT------GTTT-----CGGTTTTCGTTT-------------------------------------TTTAAAATTCCTCTTTG---------TTTAGC--------ATT------TAGTT---ATGTATTTGTAACACACGG----CCAT--------------TGGAAGG---TCCATCACGTA----TTCCCTTATT--TTTCAAC-ACTACTAG-CTAAG-T-TATTTTTTTGTT--------TTAGAT---TTTC-TCTA
droBia1 scf7180000299102:1101718-1102111 - AGTACATTTAT--TGGAGACAGTTACA--------AACAAAG---GTT--C----GTTTA-------CTTCGGGTGGT----------AGG------TTCTATTCTAAATGCTACAT--AACACCATT-TACGGATTAGCA-AATCTACGCAGCTAATAATCATGCGT-CAAGATACA--TACAGACCGCT--------TATAGTT--------CGCCT-------GG-----TATTCGTATTTCTAAAACATTTC-CTTTTGTGTTACGTTTACAACGCTCAGATATA---GTATAGTATATGG--------------TAT----AGGTAAT------------AAAGTACATATT---------GGGTTGGTAT------GTTT-----CGGTTTTCGATT-------------------------------------TGTAAAATTCCTCTTTG---------TTTAGC--------ATTTAGCATTAGTT---ATACATTTGTAACACACGG----CCAT--------------TGGAAGG---TCCATCACGTA----TTCCCTCTAC--TCAGAAC-AGTACTAG-CTAG---------------T--------TTGGAT---TTTC-GCTA
droTak1 scf7180000415653:10885-11240 - AGTACATTTAT--TTGAGTCAGTTACA--------AACAGAG---GCT--C----GTTTG-------CTTCGGGTGGT----------AAG------TTCTATTCTAAATGCTACAT--AACACCATT-TACGGATTAGCA-AA------------------------------------TACAGACTGCC--------TAAAGTT--------CGCTT-------GG-----TATTCGTATTTCTAAAACATTAT-T-----T-TTACGTTTACAACGCTCAGATATA---GTA-------TAGT-------------TAT----AGGTAAT------------AAAGTACATGTA---------GGGTTGGTAT------GTTT-----CTGTTTTCGTTT-------------------------------------TGTAAAATTCCTCTTTTTT-T----GTTTAGC--------ATTTTGCATTAGTT---ATACATTTATAACACACGG----CCAT--------------TGGAAGG---TCCATCACGAA----TTCCCTCTAT--TCTGAAC-AGTACTAG-CTAAC-T-----------TT--------TTGGAT---TTTC-TCTA
droEle1 scf7180000486474:149965-150366 + AGTACATTTAT--TTGAGACGCTCACAAACAAACAAACAAAG---GCT--C----GTTTGCTT-TTGCTTCGGGTGGT----------AGG------TTCTATTCTAAATGCTACAT--AACTCCACT-TACGGAATAGCA-AATCTACGCAGCTAATAATCATGCGT-CAAGATACA--TACAGACTGCT--------TATAGTT--------CGCTA-------GG-----TAATCGTATTTCTAAAACATTT--------G-TTACGTTTACAACGCTCAGATATA---GAA-----TATAG--------------TAT----AG---AT------------AAAGTACATGTA---------G-GTTGGTAT------GTTT-----CGGTTTTTGTTT-------------------------------------TGTAAAATTCCTCATTTTTTTTTTTTTTTAGC--------ATTTAGCTTTAGTT---ATACATTTATAACACACGG----CCAT--------------TGGAAGG---TCCATCACGTA----TTACCACAAT--TCTGAAC-AGTACTAG-CTAAC-T------------T--------TTAGAT---TTTC-GCTA
droRho1 scf7180000778053:63273-63647 + AGTACATTTAT--TTGAGTCGGTTACA--------AACAAAG---GCT--C----GTTTG-------CTTCGGGTGGT----------AGG------TTCTATTCTAAATGCTACAT--AACACCATT-TACGGAATAGCA-AGTCTACGCAGCTAATAATCATGCGC-CAAGATACA--TACAGACTGCT--------TATAGTT--------CGCTT-------GG-----TAATCGTATTTCTAAAACATTA--------T-TTACGTTTACAACGCTCAGATATA---G--------------------------TAT----AGATAAT------------AAAGTACATGTA---------G-GTTGGTAT------GTTT-----CGGTTTTCGTTT-------------------------------------TGTAAAATTCCTCTTTG---------TTTATC--------ATTTAGCATTAGTT---ATACATTTATAACACACGG----CCAT--------------TGGAAGG---TCCATCACGTA----TTCCCTCAAT--TTTGAAC-AGTACTAG-CTAAC-T------------T--------TTAGAT---TTTT-GCTA
droFic1 scf7180000453800:1315241-1315620 + AGTACATTTAT--TTGAGTCAGTTACA--------AACAATA---GCT--C----GTTTGC------TTTTGGGTGGT----------AAG------TTCTATTCTAAATGCTACAT--AACACCATT-TACGGATT-GCA-AATCTACGCAGCTAATAATCATGCGTCCAAGATACA--TACAGACTGCT--------TATAGTT--------CGCTC-------GG-----TATTCGTATTTCTAAAACAT-T--------T-TTACGTTTACAACGCTCAGATATA---GTA-----TATAG--------------TAT----ATGTAAT------------AAAGTACTTGTA---------G-GTTGGTAT------GTTT-----CGGTTTTCGTTT-------------------------------------TGTAAAATTCCTCATTG---------TTTAGC--------ATTTAGCTTTAGTT---ATACA-TTATAACACACGG----CCAT--------------TGG-AGG---TCCATCACGTA----TTCCCCCAAT--TCTGAAC-AGTACTAG-CTAAC-T------------T--------TTAGAT---TTTC-GCTA
droKik1 scf7180000302634:822744-823129 + AGTACATTTAT--TTGAGTCAGTTACG--------AACAAAG---GCT--T----GTTTGT---CGGCTTCTGGTGGT----------AAGTTACATATATATTCTAAATGCTACAC--AACACTATT-TACGGAA--------------------------------------------TACATACTGCT--------TATAGTTGCTGTTTTTGTT---TTTTTTG-----T--ATGCACTTTAAAAGCAT-G--------TTTTACGTTTACAACGCTCAGATGTA---GTA-----TA-----------------TAT----AGGTAAT------------AAAGTACATGTACATATGTATGGTTTTGTAT------GTTT-----CGGCTTTCGTTT-------------------------------------TGTAAAATTCCCCCCATCGTTAC--------T--ACTAATA---TGTATTAGCTCTAATAAATTTATCAAACAC-------------------------TGAAGGGTTCCCATCACGTTAGTAGTCCCTTAAATATATGAAC-AGTAATAA-CTTTT-T-----TGT----T---TTTGTTTAGAT---TTCT-GCTA
droAna3 scaffold_13340:9328064-9328393 - AGTACACTTAA--TTGAGTTTATTT-------------------------------------------CTCGGGTGGT----------TGGTGG--TTTCTACTCTAAATGCTACAT--AACTCCATT-AATGGAGTTTCA-AATCTATTGGGGT--------------------------------------------------T--------CCT----T-T--GATTCAATAATCGT--------AACAC-T--------T-TTACGTTTACAACGTTCAGATATA----TA-----TATAG--------------T-------GTAAGT------------AAAGTACATGTA---------G-GTTGGTAT------GTTT-----CGTTTTTCGTTTTTA----------------------------G-TTTTCATAAAATTCCTCTGTT----------------------------------------TCGCATTTATAACACTCGGGGGCCTAT--------------TAGAAGG---TCCATCACGATTT----CGATCTAT--TTTAAAC-TGTACTAGGCTAGACATTATATGTATCTTTTTTTAA-TC---A---TTTT-TCTA
droBip1 scf7180000396712:2949457-2949781 - AGTACACTTAT--TTGAGTCGGTT--------------------------TGT--TGATT-------TTTCGGGTGGT----------TGGT-----TTCTACTCTAAATGCTACAT----------------------CA-AATCTACACTGAT------------T-CC-----------CACACGGGT--------TTT-------------GTTT--T-T--GATTCTAGAATCGTATTTCTAACACT--T--------T-TTACGTTTACAACGTTCAGATATATATATA-----TATAG--------------TATGTATA---AGT------------AAAGTACTTGTA---------G-GTTGGTAT------GTTT-----CGTTTTTC------------------------------------------ATAAAATTCCTCTGTT----------------------------------------TTGCATTTATAACACTCGG----CCAT--------------GAGAAGG---GCCATCACGATTT----CGGTCTAT--ATTCAAC-GGTACTAG-CTAGACTTTATATATATCTC--------TTTGAT---TTTCATCTA
dp5 2:11316025-11316379 - -------TTAT--TTGATTCTGTTATA--------CACAAGG---AATT-TTC--GGGTT-------TTTCGGGTGGGGGGAGGAGGTAAA------CTCTATACTAAATGCTACAT--AACACCATT-TATG-ATTGGCT-AACCTAAGCAGATAATA-------------GATGTGT--------------------T----TT--------TGCC---TT---GT-----CTTTTGTATTTCTAAAACAGTTT-T-----C-ACACGTTTACAACGCTCAGATATA---GTA-----T------------------TAT----AGTTAGT------------AAAGTACATTTA---------G-GTTGGTAT------GCTT-----CGGTTG--GT--TTG----------------------------G-TTTTTGTAAAATTCCTTTCTCTTTTCT----T------TCTC--ATT-------------------TTTATAACACACGG----CCAT--------------CGGAAGA---TCCATCACGTTTA-----TATTAAT--TATGAAC-TGTACTAT-CTATG-G------------T---CTGA-TCTG-T---TTAT-GCTA
droPer2 scaffold_0:9199507-9199861 + -------TTAT--TTGAGTCTGTTATA--------CACAAGG---GATT-TTC--GGGTT-------TTTCGGGTGGGGGGAGGAGGTAAA------TTCTATACTAAATGCTACAT--AACACCATT-TATG-ATTGGCT-AACCTAAGCAGATAATA-------------GATGTGT--------------------T----TT--------TGCC---TT---GT-----CTTTTGTATTTCTAAAACAGTTT-T-----C-ACACGTTTACAACGCTCAGATATA---GTA-----T------------------TAT----AGTTAGT------------AAAGTACATTTA---------G-GTTGGTAT------GCTT-----CGGTTG--GT--TTG----------------------------G-TTTTTGTAAAATTCCTTTCTCTTTTCT----T------TCTC--ATT-------------------TTTATAACACACGG----CCAT--------------CGGAAGA---TCCATCACGTTTA-----TATTAAT--TATGAAC-TGTACTAT-CTATG-G------------T---CTGA-TCTG-T---TTTT-GCTA
droWil2 scf2_1100000004902:11589708-11590082 + A---CATTTATTTTTGAGTTTGTTATA--------CACAG-----GATTTT-GTCTTTTGTTTTTTTTTTCTGGTGGT----------T--------TACTATTTTAAATGCTACAT--CA--------------TGAGCC-AAACTACACAGCTATTAGAT-------AGAAATACATTTATCAAT----------------------------------------T-----TTTATGTATTTCTAAAACAGTTT-------T-TGACGTTTCAAACGTACAGATG-------------------------------ATAT----TGTTAATAAAGACATACATAATGTATGTGTA---------G-GTTGGTAT------GTTTTGTTTCGGTTT--------GG-----------------TTTTTTT-TAGTTTTTTGTAAAATTTCGATTTTCTTTTG--------T--TTTAATA---TGTA-----------TAA--TGTAACACACGG----TTAT--------------TGGAAGG---TCCATCACTTTTG----CACTCAAT--TATGAATAAATTCTAT-CTAAA-A------AAA--GT--------TCAGAGA--TTTT-AATA
droVir3 scaffold_12855:3962585-3962934 - A---CTTTTAT--TTAAGTCAATTATA--------CACAAAG---GTT--TAA--AGTTT-------TTTCGGGTGGT----------A--------TACTATTTATAATGCTACTT--AACACCAGT-TCTAAATGAGCACAATCTACGCAGC------------GT-AA-AAAACAA------------------------TTT--------GGC-------------------TTGTATTTGTAATACCATT--------T-TTACGAT-ACA--GTTGAAATGTG-------------TGG------------GATAT----TGTTAAT------------AAAGTATTTCTA---------G-GTAGGTTTT-----CTTT-----TAATTT--------AT-----------------TTTATTTTTTTTTTATTGTAAAAGTCTTCAATA-------------------TAATA---TGCA-----------ACA--TTTAACACACGG----TTAT----ACTTCCAATATCGAAGG---TCCATCACGTTTA----CACTTAAT--ATTAAGC-GTTACCAT-CTAAA-T-----------TT--------TCAGAGT--TTTT-ACTA
droMoj3 scaffold_6540:8269577-8269959 - A---CTTTTAT--TTGAGTCAATTATA--------CACAAAGTGGGATGTT-GA-GTGTT-------TTTCGGGTGGT----------TC--------ACTATTTTAAATGCTAAAT--AACACCAGT-ACTAAATTAGCACAAACTACGCAGC------------GT-CAAAA-ACA------------------------AGTT--------GGCT-------------------TGTATTTGTAATACCATTT-T-----T-TCACGAT-AC--AGTTCAAATATGTT--TT-----TGTAGT----------TATTGT----TGTTAAT------------AAAGTACATCTA---------G-GTAGGTTCTTTTTTGTTT-----TGTTTTTAGTTT--AGATTTTTTGTTTTTTGTTTTTAT---TTTTTTATTGTAAAATTCCTCAATA-------------------TAATA---TGCA-----------ACA--TTTAACACACGG----CCATACATACTTCCAATATCGAAGG---TCCATCACGTTTC----CACTTAGT----------------GT-CTAAA-A-----------TT--------TCAGAGTTTTTCT-ACTA
droGri2 scaffold_14906:6584315-6584662 - A---CTTTTAT--TTGAGTCAATTATA--------CACAGTG---GTT--TT---ATTTC-------TGTCGGGTGGT----------A--------TACTATTTTAAATGCTACAT--AACACCAGT-TCTAAATTAGCACAAACTACGTAGC------------GT-CAAAACA--------------------------AGTT--------TGCT-------------------TGTATTTGTAATACAATTT-TT----G-TTACGAT-ACA--GTTAAAA--------TG-----TGTAGT-------------AAT----GTTTAAT------------AAAGTATTTGTA---------G-GTCGATTTT-----GTTT----TCGATTTTTATTT-------------------------------TTGTATTGTAAAATTTCTCAATA-------------------TAATA---TGCA-----------ACA--TTTAACACACGG----CCAT----TCTTTCAATATCGAAGG---TCCATCACGTTTC----CACTTAAT--TTTAATC-GGTACTAG-CTAAA-T------------T---CAGAATCAGAG---TTTG-AATG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGTACATTTAT--TTGAGTCAGTTGCA--------AACAAAG---GCT--C----GTTCG-------CTTCGGGTGGT----------AAGTTA--GTTCTATTCTAAATGCTACAT--AACACCACG-TACGGATTAGCA-AACCTACGCAGCTA-------------CAAGATACATTTACAGATTGATTTTAGGTTTTTAGTT--------CGCTT-------GC-----TACTCGCACTTTTAAAACAT-G--------T-TTACGTTTACAACGCTCAGATATA---GTA-----TATAGTATATATAGTATAGTAT----AGTTAGT------------AAAGTACTTGTA---------GGGTTGGTAT------GTTT-----CGGTTTTCGTTT-------------------------------------TGTAAAATTCCTCTTTTT--T------CTAGC--------A----------------------TTATAACACAT----------------------------------------------------------T--TCTGCAG-AGTACTAG-CTAAC-G------------T--------TTGGAT---TTTC-GCTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................AGTACTTGTA---------GGGTTGGTAT------G...............................................................................................................................................................................................................................................................2112.00200000000000002000
..................................................................................................................CAT--AACACCACG-TACGGATTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00201000100000000000
...............................................................................................................CTACAT--AACACCACG-TACGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
..................................................................................................................................................................................................................................................................................................................................................................GTA---------GGGTTGGTAT------GTTT-----CGGT...................................................................................................................................................................................................................................................2111.00110000000000000000
...................................................................................................................................................................................................................................C-----TACTCGCACTTTTAAAACAT-................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................TACTTGTA---------GGGTTGGTAT------GTT.............................................................................................................................................................................................................................................................2111.00100000000000001000
..........................................................................................................................................................TA-------------CAAGATACATTTACAGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000100000000000
.................................................................................................................ACAT--AACACCACG-TACGGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
........................................................................................................................................................................................................TTAGTT--------CGCTT-------GC-----TACTCGCA.............................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................AAAGTACTTGTA---------GGGTTGGTA.......................................................................................................................................................................................................................................................................2111.00100000000010000000
.......................TGCA--------AACAAAG---GCT--C----GTTCG-------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
...........................................................................................................................................................................................................GTT--------CGCTT-------GC-----TACTCGCACTT..........................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
....................................................................................................................................................CGCAGCTA-------------CAAGATACATTTAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000100000000000
......................................................................................................................................................................................................................................................AAAACAT-G--------T-TTACGTTTACAAAA.......................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000001000
............................................................................................................................................................................................................................................................................................................................................................GTACTTGTA---------GGGTTGGTAT------G...............................................................................................................................................................................................................................................................2011.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................AAGTACTTGTA---------GGGTTGGTA.......................................................................................................................................................................................................................................................................2011.00100000000000001000
.................GTCAGTTGCA--------AACAAAG---GCT--C----.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TTGGTAT------GTTT-----CGGTTTTCG..............................................................................................................................................................................................................................................2011.00100010000000000000
.............................................................................................................................ACG-TACGGATTAGCA-AACCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001000000000000
.......................................AAG---GCT--C----GTTCG-------CTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1560.17100000010000000000
droSec2
AGTACATTTAT--TTGAGTCAGTTGCA--------AACAAAG---GCT--C----GTTCG-------CTTCGGGTGGT----------AAGTTA--GTTCTATTCAAAATGCTACAT--AACACCACG-TACGGATTAGCA-AACCTACGCAGCTA-------------CAAGATACATTTACAGATTGATTTTGGGGTTTTAGTT--------CGCTT-------GC-----TACTTGCACTTTTAAAACAT-G--------T-TTACGTTTACAACGCTCAGATATA---GTA-----TATAGTATATA-----TAGTAT----AGTTAGT------------AAAGTACTTGTG---------G-GTTGGTAT------GTTT-----CGGTTTTCGTTT-------------------------------------TGTAAAATTCCTCTTTTT--T------CTAGC--------A----------------------TTATAACACAT----------------------------------------------------------T--TCTTCAG-AGTACTAT-CTAAC-G------------T--------TTGGAT---TTTC-GCTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................TTACAGATTGATTTTGGGGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020101
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----------------------------------------------------------T--TCTTCAG-AGTACTAT-CTA...........................................2112.0022000
.......................................................................................................................................................................................................................................................................................................................................GTTAGT------------AAAGTACTTGTG---------G-GT............................................................................................................................................................................................................................................................................2111.0011000
................................................................................................................................................................................................TTGGGGTTTTAGTT--------CGCTT-------GC-----.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAC-G------------T--------TTGGAT---TTTC-GCTA2111.0011000
........................................................TTCG-------CTTCGGGTGGT----------AAGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
......TTTAT--TTGAGTCAGTTGCA--------AA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.............................................................................................................................................................................ATACATTTACAGATTGATTTTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
..................TCAGTTGCA--------AACAAAG---GCT--............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCTCTTTTT--T------CTAGC--------A----------------------TT.....................................................................................................................................2111.0010100
..............................................CT--C----GTTCG-------CTTCGGGTGGT----------A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
dm3
AGTACATTTAT--TTGAGTCAGTTGCA--------AACAAAG---GAT--C----GTTCG-------CTTCGGGTGGT----------AAGTTA--GTTCTATTCTAAATGCTACAT--AACACCACG-TACGGATTAGCA-AACCTACGCA-----------TGCGT-CATGATACATTTACAGACTGATTTTGGGTTTTTAGTT--------CGCTT-------GC-----TACTCGCACTTTTAAAACAT-G--------T-TTACGTTTACAACGCTCAGATATA---GTATA---TATAGT---------ATAGTAT----AGTTAGT------------AAAGTACTTGTA---------GGTTTGGTAT------GTTT-----CGCTTTTCGTTT-------------------------------------TGTAAAATTCCTCTTTTTT-T---------------------CTAGCTTTAGTT---ATACACTTATAACACA----------------------------------------------------------AT--TCTGCAG-AGTACTAG-CTAAC-G-----------AC--------TTGGAA---TTTC-GCTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................TTTAGTT--------CGCTT-------GC-----TACTCGC..............................................................................................................................................................................................................................................................................................................................................................................................................21113.001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................TAGCA-AACCTACGCA-----------TGCGT-C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AAG---GAT--C----GTTCG-------CTTCGGGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................AAAG---GAT--C----GTTCG-------CTTCGGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CAAAG---GAT--C----GTTCG-------CTTCGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...ACATTTAT--TTGAGTCAGTTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
............................................................................................................................CACG-TACGGATTAGCA-AACCTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000000000000000
..............TGAGTCAGTTGCA--------AACAAAG---G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAACACA----------------------------------------------------------AT--TCTGCAG-AGT....................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GTTGCA--------AACAAAG---GAT--C----GTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................ATTCTAAATGCTACAT--AACAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AGTTGCA--------AACAAAG---GAT--C----GTTCG-------CT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000
..........T--TTGAGTCAGTTGCA--------AACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AACAAAG---GAT--C----GTTCG-------CTTCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAACACA----------------------------------------------------------AT--TCTGCAG-AG.....................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................A---------GGTTTGGTAT------GTTT-----CGCT...................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
................................................................................................................................................................................CATTTACAGACTGATTTTGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CTCGCACTTTTAAAACAT-G--------T-.....................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAG-AGTACTAG-CTAAC-G-----------AC--------..................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAC-G-----------AC--------TTGGAA---TTTC-GCTG2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAG-AGTACTAG-CTAAC-G-----------AC--------TTGG..............2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAACACA----------------------------------------------------------AT--TCTGCAG-AGT....................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CAGTTGCA--------AACAAAG---GAT--C----GTTCG-------CT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
....................................ACAAAG---GAT--C----GTTCG-------CTTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................AGCA-AACCTACGCA-----------TGCGT-CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TTTTAGTT--------CGCTT-------GC-----TACTCG...............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA----------------------------------------------------------AT--TCTGCAG-AGTACTAG-C.............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TACTTGTA---------GGTTTGGTAT------GTTT-----CGC....................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAACACA----------------------------------------------------------AT--TCTGCAG-AG.....................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................GTTCG-------CTTCGGGTGGT----------AAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................TTGTA---------GGTTTGGTAT------GTTT-----CG.....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTT-----CGCTTTTCGTTT-------------------------------------TGTAAA................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-CTAAC-G-----------AC--------TTGGAA---TTTC-G...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTAG-CTAAC-G-----------AC--------TTGGAA---TTTC-GC..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................CAGTTGCA--------AACAAAG---GAT--C----GTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................GAT--C----GTTCG-------CTTCGGGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................C----GTTCG-------CTTCGGGTGGT----------AAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................CTACAT--AACACCACG-TACGGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................ACTTGTA---------GGTTTGGTAT------G...............................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................ATTTACAGACTGATTTTGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TGAGTCAGTTGCA--------AACAAAG---GAT--C----GTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................TTTTGGGTTTTTAGTT--------CGCTT-------............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................A--------AACAAAG---GAT--C----GTTCG-------CTTCGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTTATAACACA----------------------------------------------------------AT--TCT............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TACTTGTA---------GGTTTGGTAT------GTT.............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AT--C----GTTCG-------CTTCGGGTGGT----------A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................CA--------AACAAAG---GAT--C----GTTCG-------CTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.................................................................................................................................................................................................TGGGTTTTTAGTT--------CGCTA-------............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AGTACTTGTA---------GGTTTGGTAT------GT..............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....CATTTAT--TTGAGTCAGTTGCA--------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................CGCTTTTCGTTT-------------------------------------TGTAAAATTA............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................A--------AACAAAG---GAT--C----GTTCG-------CTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................TTTACAACGCTCAGATATA---GT........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTTAT--TTGAGTCAGTTGCA--------AACAAAG---GA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-CTAAC-G-----------AC--------TTGGAA---TTTC-GC..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTGAGTCAGTTGCA--------AACAAAG---.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....................................................................................................................................................................................ACAGACTGATTTTGGGTTTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................AG---GAT--C----GTTCG-------CTTCGGGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................T--C----GTTCG-------CTTCGGGTGGT----------AAGTTA--GT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TT-------------------------------------TGTAAAATTCCTCTTTTTT-..................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACA----------------------------------------------------------AT--TCTGCAG-AGTACTAG-CTAAC-........................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AAAGTACTTGTA---------GGTTTGGT........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCAG-AGTACTAG-CTAAC-G-----------AC--------TTGGAA---.........2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TTGCA--------AACAAAG---GAT--C----GTTCG-------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTACAACGCTCAGATATA---GT........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.............................................GAT--C----GTTCG-------CTTCGGGTGGT----------A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................C-----TACTCGCACTTTTAAAACAT-G--------.......................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................AT--C----GTTCG-------CTTCGGGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GTACATTTAT--TTGAGTCAGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TTACAGACTGATTTTGGGTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................ACTCGCACTTTTAAAACAT-G--------T-.....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................GTAT----AGTTAGT------------AAAGTACTTG...........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAC-G-----------AC--------TTGGAA---TTTC-GCT.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................CTTCGGGTGGT----------AAGTTA--GTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................T--AACACCACG-TACGGATTAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................AG---GAT--C----GTTCG-------CTTCGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TACAT--AACACCACG-TACGGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................CACCACG-TACGGATTAGCA-AA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
............................................................................................................ATGCTACAT--AACACCACG-.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TTTACAACGCTCAGATATA---GTATC---..................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TACGGATTAGCA-AACCTACGCC-----------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................AAG---GAT--C----GTTCG-------CTTCGGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................T-TTACGTTTACAACGCTCAGA.................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CTTGTA---------GGTTTGGTAT------GTTT-----C......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................TCG-------CTTCGGGTGGT----------AAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CTTGTA---------GGTTTGGTAT------GTTT-----CGG....................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.................................................................................................................................................................................ATTTACAGACTGATTTTGGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TTGCA--------AACAAAG---GAT--C----GTTCG-------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TACAT--AACACCACG-TACGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TCTGCAG-AGTACTAG-CTAAC-G-----------AC--------TTGG..............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................AATGCTACAT--AACACCACG-TAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTTAT--TTGAGTCAGTTGCA--------AACAAAG---GAT--C----.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................AGTTA--GTTCTATTCTAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................ATATA---GTATA---TATAGT---------ATAGT..............................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
droEre2
AGTACATTTAT--TTGAGTCAGTTGCA--------AACAAAG---GAT--C----GTTTG-------CTTCGGGTGGT----------AAG------TTCTATTCTAAATGCTACAT--AACACCATG-TACGGATTAGCA-AGCCTACGCAGCTACTAATCATGCGT-CAAGATACATTTACAGACTGAT--------TTTAGTT--------CGCTTGCTT---GC-----TTTTCGCACTTTTAAAACAT-G--------T-TTACGTTTACAACGCTCAGATATA-------------TAG--------------TAT----AGGTAAT------------AAAGTACTTATA---------GGGTTGGTAT------GTTT-----CGGTTTTCGCTT-------------------------------------TGTAAAATTCCTCTTTT----------CTAGCATTATC--ATTTCGCATTAGTT---ATGCACTTATAACACACG------------------------------------------TA----CTGCCCCAGC--TCCGAAA-AATACTA-----AT-A------------T--------TTGGAT----TTC-GCTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................TTTAGTT--------CGCTTGCTT---GC-----TTT..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
..........................................................................................................................................................................................................................................................................................AGATATA-------------TAG--------------TAT----AGGTAAT------------.....................................................................................................................................................................................................................................................................................................2011.0010000100
..........................................................................................................................................................................................................................................................................................................................................................AAGTACTTATA---------GGGTTGGTA.......................................................................................................................................................................................................................................................................2011.0011000000
droYak3
AGTACATTTAT--TTGAGTCAGTTGCA--------AACAGAG---GCT--T----GTTTG-------CTTCGGGTGGT----------AAG------TTCTATTCTAAATGCTACAT--AACACCATG-TACGGATTAGCA-AACCTACGCAATTACTAATCATGCGT-CAAGATACAT--------------------TTTAGTA--------CGCTTGCTT---GC-----TATTCGCACTTTTAAAACAT-G--------T-TTACGTTTACAACGCTCAGATATATAGGTA-----TATAG--------------TAT----AGGTAAT------------AAAGTACTTGTA---------GGGTTGGTAT------GTTT-----CGGTTTTCGCTT-------------------------------------TGTAAAATTGCTCTTTTT----------TAGCATTACC--ATTTCGCATTAGTT---ATGCACTTATAACACACG------------------------------------------TA----CTGCCTCAAT--TCTGAAG-TGTACTA-----AC-A------------T--------TTGGAT---TTTC-GCTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................GCT--T----GTTTG-------CTTCGGGTGGT----------A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.............................................................................................................................................................................................................................................................................GTTTACAACGCTCAGATATAT............................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.......................................................................................................................................................................................................................GCTTGCTT---GC-----TATTCGCACTT..........................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.................................................................................................................ACAT--AACACCATG-TACGGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
droEug1
AGTACATTTAT--TTGAGTCGGTTACA--------AACAAAG---GCT--C----GTTTG-------CTTCGGGTGGT----------AAG------TTCTATTCTAAATGCTACATATAACACCATTTTACGGATCAGCA-AATCTACGCAGCTAATAATCATGCGTCCAAGTTGCAAATACAGACTGCT--------TGTAGTT--------CGCTT-------GG-----TATTCGTATTTGTTAAACATTTCTT-----T-GTACGTTTACAACGTTCAGATATA---GTA-----TATAG--------------TAT----ATGTAAT------------AAAGTACATGTA---------GGGTTGGTAT------GTTT-----CGGTTTTCGTTT-------------------------------------TTTAAAATTCCTCTTTG---------TTTAGC--------ATT------TAGTT---ATGTATTTGTAACACACGG----CCAT--------------TGGAAGG---TCCATCACGTA----TTCCCTTATT--TTTCAAC-ACTACTAG-CTAAG-T-TATTTTTTTGTT--------TTAGAT---TTTC-TCTASizeHit CountTotal NormTotal
No Reads
droBia1
AGTACATTTAT--TGGAGACAGTTACA--------AACAAAG---GTT--C----GTTTA-------CTTCGGGTGGT----------AGG------TTCTATTCTAAATGCTACAT--AACACCATT-TACGGATTAGCA-AATCTACGCAGCTAATAATCATGCGT-CAAGATACA--TACAGACCGCT--------TATAGTT--------CGCCT-------GG-----TATTCGTATTTCTAAAACATTTC-CTTTTGTGTTACGTTTACAACGCTCAGATATA---GTATAGTATATGG--------------TAT----AGGTAAT------------AAAGTACATATT---------GGGTTGGTAT------GTTT-----CGGTTTTCGATT-------------------------------------TGTAAAATTCCTCTTTG---------TTTAGC--------ATTTAGCATTAGTT---ATACATTTGTAACACACGG----CCAT--------------TGGAAGG---TCCATCACGTA----TTCCCTCTAC--TCAGAAC-AGTACTAG-CTAG---------------T--------TTGGAT---TTTC-GCTASizeHit CountTotal NormTotal
No Reads
droTak1
AGTACATTTAT--TTGAGTCAGTTACA--------AACAGAG---GCT--C----GTTTG-------CTTCGGGTGGT----------AAG------TTCTATTCTAAATGCTACAT--AACACCATT-TACGGATTAGCA-AA------------------------------------TACAGACTGCC--------TAAAGTT--------CGCTT-------GG-----TATTCGTATTTCTAAAACATTAT-T-----T-TTACGTTTACAACGCTCAGATATA---GTA-------TAGT-------------TAT----AGGTAAT------------AAAGTACATGTA---------GGGTTGGTAT------GTTT-----CTGTTTTCGTTT-------------------------------------TGTAAAATTCCTCTTTTTT-T----GTTTAGC--------ATTTTGCATTAGTT---ATACATTTATAACACACGG----CCAT--------------TGGAAGG---TCCATCACGAA----TTCCCTCTAT--TCTGAAC-AGTACTAG-CTAAC-T-----------TT--------TTGGAT---TTTC-TCTASizeHit CountTotal NormTotal
No Reads
droEle1
AGTACATTTAT--TTGAGACGCTCACAAACAAACAAACAAAG---GCT--C----GTTTGCTT-TTGCTTCGGGTGGT----------AGG------TTCTATTCTAAATGCTACAT--AACTCCACT-TACGGAATAGCA-AATCTACGCAGCTAATAATCATGCGT-CAAGATACA--TACAGACTGCT--------TATAGTT--------CGCTA-------GG-----TAATCGTATTTCTAAAACATTT--------G-TTACGTTTACAACGCTCAGATATA---GAA-----TATAG--------------TAT----AG---AT------------AAAGTACATGTA---------G-GTTGGTAT------GTTT-----CGGTTTTTGTTT-------------------------------------TGTAAAATTCCTCATTTTTTTTTTTTTTTAGC--------ATTTAGCTTTAGTT---ATACATTTATAACACACGG----CCAT--------------TGGAAGG---TCCATCACGTA----TTACCACAAT--TCTGAAC-AGTACTAG-CTAAC-T------------T--------TTAGAT---TTTC-GCTASizeHit CountTotal NormTotal
No Reads
droRho1
AGTACATTTAT--TTGAGTCGGTTACA--------AACAAAG---GCT--C----GTTTG-------CTTCGGGTGGT----------AGG------TTCTATTCTAAATGCTACAT--AACACCATT-TACGGAATAGCA-AGTCTACGCAGCTAATAATCATGCGC-CAAGATACA--TACAGACTGCT--------TATAGTT--------CGCTT-------GG-----TAATCGTATTTCTAAAACATTA--------T-TTACGTTTACAACGCTCAGATATA---G--------------------------TAT----AGATAAT------------AAAGTACATGTA---------G-GTTGGTAT------GTTT-----CGGTTTTCGTTT-------------------------------------TGTAAAATTCCTCTTTG---------TTTATC--------ATTTAGCATTAGTT---ATACATTTATAACACACGG----CCAT--------------TGGAAGG---TCCATCACGTA----TTCCCTCAAT--TTTGAAC-AGTACTAG-CTAAC-T------------T--------TTAGAT---TTTT-GCTASizeHit CountTotal NormTotal
No Reads
droFic1
AGTACATTTAT--TTGAGTCAGTTACA--------AACAATA---GCT--C----GTTTGC------TTTTGGGTGGT----------AAG------TTCTATTCTAAATGCTACAT--AACACCATT-TACGGATT-GCA-AATCTACGCAGCTAATAATCATGCGTCCAAGATACA--TACAGACTGCT--------TATAGTT--------CGCTC-------GG-----TATTCGTATTTCTAAAACAT-T--------T-TTACGTTTACAACGCTCAGATATA---GTA-----TATAG--------------TAT----ATGTAAT------------AAAGTACTTGTA---------G-GTTGGTAT------GTTT-----CGGTTTTCGTTT-------------------------------------TGTAAAATTCCTCATTG---------TTTAGC--------ATTTAGCTTTAGTT---ATACA-TTATAACACACGG----CCAT--------------TGG-AGG---TCCATCACGTA----TTCCCCCAAT--TCTGAAC-AGTACTAG-CTAAC-T------------T--------TTAGAT---TTTC-GCTASizeHit CountTotal NormTotal
No Reads
droKik1
AGTACATTTAT--TTGAGTCAGTTACG--------AACAAAG---GCT--T----GTTTGT---CGGCTTCTGGTGGT----------AAGTTACATATATATTCTAAATGCTACAC--AACACTATT-TACGGAA--------------------------------------------TACATACTGCT--------TATAGTTGCTGTTTTTGTT---TTTTTTG-----T--ATGCACTTTAAAAGCAT-G--------TTTTACGTTTACAACGCTCAGATGTA---GTA-----TA-----------------TAT----AGGTAAT------------AAAGTACATGTACATATGTATGGTTTTGTAT------GTTT-----CGGCTTTCGTTT-------------------------------------TGTAAAATTCCCCCCATCGTTAC--------T--ACTAATA---TGTATTAGCTCTAATAAATTTATCAAACAC-------------------------TGAAGGGTTCCCATCACGTTAGTAGTCCCTTAAATATATGAAC-AGTAATAA-CTTTT-T-----TGT----T---TTTGTTTAGAT---TTCT-GCTASizeHit CountTotal NormTotal
No Reads
droAna3
AGTACACTTAA--TTGAGTTTATTT-------------------------------------------CTCGGGTGGT----------TGGTGG--TTTCTACTCTAAATGCTACAT--AACTCCATT-AATGGAGTTTCA-AATCTATTGGGGT--------------------------------------------------T--------CCT----T-T--GATTCAATAATCGT--------AACAC-T--------T-TTACGTTTACAACGTTCAGATATA----TA-----TATAG--------------T-------GTAAGT------------AAAGTACATGTA---------G-GTTGGTAT------GTTT-----CGTTTTTCGTTTTTA----------------------------G-TTTTCATAAAATTCCTCTGTT----------------------------------------TCGCATTTATAACACTCGGGGGCCTAT--------------TAGAAGG---TCCATCACGATTT----CGATCTAT--TTTAAAC-TGTACTAGGCTAGACATTATATGTATCTTTTTTTAA-TC---A---TTTT-TCTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................TATTT-------------------------------------------CTCGGGTGGT----------TGGTGG--..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002100001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCTAGACATTATATGTA..............................2012.002200000
.................................................................................................TTCTACTCTAAATGCTACAT--A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................ATTT-------------------------------------------CTCGGGTGGT----------TGGTGG--..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATTTATAACACTCGGGGG.......................................................................................................................2111.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAACACTCGGGGGCCTAT--------------....................................................................................................2111.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCATTTATAACACTCGGGG........................................................................................................................2111.001100000
......................................................................CGGGTGGT----------TGGTGG--TTTCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.................GTTTATTT-------------------------------------------CTCGGGTGGT----------TGGTGG--T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAT--TTTAAAC-TGTACTAGG..............................................2111.001100000
droBip1
AGTACACTTAT--TTGAGTCGGTT--------------------------TGT--TGATT-------TTTCGGGTGGT----------TGGT-----TTCTACTCTAAATGCTACAT----------------------CA-AATCTACACTGAT------------T-CC-----------CACACGGGT--------TTT-------------GTTT--T-T--GATTCTAGAATCGTATTTCTAACACT--T--------T-TTACGTTTACAACGTTCAGATATATATATA-----TATAG--------------TATGTATA---AGT------------AAAGTACTTGTA---------G-GTTGGTAT------GTTT-----CGTTTTTC------------------------------------------ATAAAATTCCTCTGTT----------------------------------------TTGCATTTATAACACTCGG----CCAT--------------GAGAAGG---GCCATCACGATTT----CGGTCTAT--ATTCAAC-GGTACTAG-CTAGACTTTATATATATCTC--------TTTGAT---TTTCATCTASizeHit CountTotal NormTotal
No Reads
dp5
-------TTAT--TTGATTCTGTTATA--------CACAAGG---AATT-TTC--GGGTT-------TTTCGGGTGGGGGGAGGAGGTAAA------CTCTATACTAAATGCTACAT--AACACCATT-TATG-ATTGGCT-AACCTAAGCAGATAATA-------------GATGTGT--------------------T----TT--------TGCC---TT---GT-----CTTTTGTATTTCTAAAACAGTTT-T-----C-ACACGTTTACAACGCTCAGATATA---GTA-----T------------------TAT----AGTTAGT------------AAAGTACATTTA---------G-GTTGGTAT------GCTT-----CGGTTG--GT--TTG----------------------------G-TTTTTGTAAAATTCCTTTCTCTTTTCT----T------TCTC--ATT-------------------TTTATAACACACGG----CCAT--------------CGGAAGA---TCCATCACGTTTA-----TATTAAT--TATGAAC-TGTACTAT-CTATG-G------------T---CTGA-TCTG-T---TTAT-GCTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................AAGG---AATT-TTC--GGGTT-------TTTCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATG-G------------T---CTGA-TCTG-T---TTAT-GCT.2111.0010000001000
..........................A--------CACAAGG---AATT-TTC--GGGTT-------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAAC-TGTACTAT-CTATG-G------------...........................2121.0020000000200
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------------------TTTATAACACACGG----CCAT--------------CGG.................................................................................................2220.5010100000000
.............................................................................................................................................................................................................................................................................................................................................................TACATTTA---------G-GTTGGTAT------GCTT-----.......................................................................................................................................................................................................................................................2120.5010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTTTTCT----T------TCTC--ATT-------------------TTT.....................................................................................................................................2120.5010100000000
..................................................................................................................................................................................................................................................................................................................................................................TTA---------G-GTTGGTAT------GCTT-----CGGT...................................................................................................................................................................................................................................................2020.5010100000000
....................................................................................................................................................................................................................................................................................................................................................................A---------G-GTTGGTAT------GCTT-----CGGTTG--...............................................................................................................................................................................................................................................2020.5010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--ATT-------------------TTTATAACACACGG----CC....................................................................................................................2020.5010100000000
................................................................................................................................................................................................................................................................................................................................................................................GTTGGTAT------GCTT-----CGGTTG--GT--T..........................................................................................................................................................................................................................................2120.5010100000000
...................................................................................................................................................................................................................................................................................................................................................................TA---------G-GTTGGTAT------GCTT-----CGGTTG--...............................................................................................................................................................................................................................................2120.5010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC--ATT-------------------TTTATAACACACGG----C.....................................................................................................................2120.5010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................CTT-----CGGTTG--GT--TTG----------------------------G-TTTTTG....................................................................................................................................................................................................2120.5010100000000
................................................................................................................................................................................................................................................................................................................................................................ATTTA---------G-GTTGGTAT------GCTT-----CGG....................................................................................................................................................................................................................................................2120.5010100000000
.............................................................................................................................................................................................................T--------TGCC---TT---GT-----CTTTTGTATTTC.........................................................................................................................................................................................................................................................................................................................................................................................................2120.5010100000000
.................................................................................................................................TATG-ATTGGCT-AACCTAAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTG----------------------------G-TTTTTGTAAAATTCCT..........................................................................................................................................................................................2020.5010100000000
..............................................................................................................................................................A-------------GATGTGT--------------------T----TT--------TGCC---TT---GT-----C....................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010100000000
...................................................................................................................................................................................................................................................................................................................................................................................GGTAT------GCTT-----CGGTTG--GT--TTG----------------------------G-..........................................................................................................................................................................................................2120.5010100000000
.........................................................................................................................CACCATT-TATG-ATTGGCT-AA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010100000000
...............................................................................................................................................................................................................................................................................................................................................................CATTTA---------G-GTTGGTAT------GCTT-----CG.....................................................................................................................................................................................................................................................2120.5010100000000
..............................................................................................................................................................................................................................................................................................................................................................ACATTTA---------G-GTTGGTAT------GCTT-----C......................................................................................................................................................................................................................................................2120.5010100000000
droPer2
-------TTAT--TTGAGTCTGTTATA--------CACAAGG---GATT-TTC--GGGTT-------TTTCGGGTGGGGGGAGGAGGTAAA------TTCTATACTAAATGCTACAT--AACACCATT-TATG-ATTGGCT-AACCTAAGCAGATAATA-------------GATGTGT--------------------T----TT--------TGCC---TT---GT-----CTTTTGTATTTCTAAAACAGTTT-T-----C-ACACGTTTACAACGCTCAGATATA---GTA-----T------------------TAT----AGTTAGT------------AAAGTACATTTA---------G-GTTGGTAT------GCTT-----CGGTTG--GT--TTG----------------------------G-TTTTTGTAAAATTCCTTTCTCTTTTCT----T------TCTC--ATT-------------------TTTATAACACACGG----CCAT--------------CGGAAGA---TCCATCACGTTTA-----TATTAAT--TATGAAC-TGTACTAT-CTATG-G------------T---CTGA-TCTG-T---TTTT-GCTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................GAGGAGGTAAA------TTCTATACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....................................................................................................................................................................................................................................................................................................................................................................................GTAT------GCTT-----CGGTTG--GT--TTG----------------------------G-..........................................................................................................................................................................................................2011.001000001
..........................................................................................................................................................................................................................................................................................................................................................AAGTACATTTA---------G-GTTGGTAT------G...............................................................................................................................................................................................................................................................2111.001000010
droWil2
A---CATTTATTTTTGAGTTTGTTATA--------CACAG-----GATTTT-GTCTTTTGTTTTTTTTTTCTGGTGGT----------T--------TACTATTTTAAATGCTACAT--CA--------------TGAGCC-AAACTACACAGCTATTAGAT-------AGAAATACATTTATCAAT----------------------------------------T-----TTTATGTATTTCTAAAACAGTTT-------T-TGACGTTTCAAACGTACAGATG-------------------------------ATAT----TGTTAATAAAGACATACATAATGTATGTGTA---------G-GTTGGTAT------GTTTTGTTTCGGTTT--------GG-----------------TTTTTTT-TAGTTTTTTGTAAAATTTCGATTTTCTTTTG--------T--TTTAATA---TGTA-----------TAA--TGTAACACACGG----TTAT--------------TGGAAGG---TCCATCACTTTTG----CACTCAAT--TATGAATAAATTCTAT-CTAAA-A------AAA--GT--------TCAGAGA--TTTT-AATASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGG----TTAT--------------TGGAAGG---TCCA......................................................................................2111.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACACGG----TTAT--------------TGGAAGG---T.........................................................................................2011.00101000
droVir3
A---CTTTTAT--TTAAGTCAATTATA--------CACAAAG---GTT--TAA--AGTTT-------TTTCGGGTGGT----------A--------TACTATTTATAATGCTACTT--AACACCAGT-TCTAAATGAGCACAATCTACGCAGC------------GT-AA-AAAACAA------------------------TTT--------GGC-------------------TTGTATTTGTAATACCATT--------T-TTACGAT-ACA--GTTGAAATGTG-------------TGG------------GATAT----TGTTAAT------------AAAGTATTTCTA---------G-GTAGGTTTT-----CTTT-----TAATTT--------AT-----------------TTTATTTTTTTTTTATTGTAAAAGTCTTCAATA-------------------TAATA---TGCA-----------ACA--TTTAACACACGG----TTAT----ACTTCCAATATCGAAGG---TCCATCACGTTTA----CACTTAAT--ATTAAGC-GTTACCAT-CTAAA-T-----------TT--------TCAGAGT--TTTT-ACTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................TGAGCACAATCTACGCAGC------------GT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003001000000000000000000001000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................AT-ACA--GTTGAAATGTG-------------TGG------------GA...............................................................................................................................................................................................................................................................................................................................2112.002000000000200000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATATCGAAGG---TCCATCAC..................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTGTAAAAGTCTTCAATA-------------------..................................................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT----ACTTCCAATATCGAAGG---..........................................................................................2011.001000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................AAAACAA------------------------TTT--------GGC-------------------TTGTA.............................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000010000000000000000000000000000000000000
....................................................A--AGTTT-------TTTCGGGTGGT----------A--------TACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................GC-------------------TTGTATTTGTAATACCATT--------.......................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................CTAAATGAGCACAATCTACGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAGC-GTTACCAT-CTAAA-T-----------T...........................2111.001000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................ATGAGCACAATCTACGCAGC------------G.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................................C------------GT-AA-AAAACAA------------------------TTT--------GGC-------------------TTG...............................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
droMoj3
A---CTTTTAT--TTGAGTCAATTATA--------CACAAAGTGGGATGTT-GA-GTGTT-------TTTCGGGTGGT----------TC--------ACTATTTTAAATGCTAAAT--AACACCAGT-ACTAAATTAGCACAAACTACGCAGC------------GT-CAAAA-ACA------------------------AGTT--------GGCT-------------------TGTATTTGTAATACCATTT-T-----T-TCACGAT-AC--AGTTCAAATATGTT--TT-----TGTAGT----------TATTGT----TGTTAAT------------AAAGTACATCTA---------G-GTAGGTTCTTTTTTGTTT-----TGTTTTTAGTTT--AGATTTTTTGTTTTTTGTTTTTAT---TTTTTTATTGTAAAATTCCTCAATA-------------------TAATA---TGCA-----------ACA--TTTAACACACGG----CCATACATACTTCCAATATCGAAGG---TCCATCACGTTTC----CACTTAGT----------------GT-CTAAA-A-----------TT--------TCAGAGTTTTTCT-ACTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAAGG---TCCATCACGTTTC----CAC......................................................................2311.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA---TGCA-----------ACA--TTTAACACACGG----......................................................................................................................2111.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTTTTTTGTTTTTAT---T.............................................................................................................................................................................................................21200.051100000
droGri2
A---CTTTTAT--TTGAGTCAATTATA--------CACAGTG---GTT--TT---ATTTC-------TGTCGGGTGGT----------A--------TACTATTTTAAATGCTACAT--AACACCAGT-TCTAAATTAGCACAAACTACGTAGC------------GT-CAAAACA--------------------------AGTT--------TGCT-------------------TGTATTTGTAATACAATTT-TT----G-TTACGAT-ACA--GTTAAAA--------TG-----TGTAGT-------------AAT----GTTTAAT------------AAAGTATTTGTA---------G-GTCGATTTT-----GTTT----TCGATTTTTATTT-------------------------------TTGTATTGTAAAATTTCTCAATA-------------------TAATA---TGCA-----------ACA--TTTAACACACGG----CCAT----TCTTTCAATATCGAAGG---TCCATCACGTTTC----CACTTAAT--TTTAATC-GGTACTAG-CTAAA-T------------T---CAGAATCAGAG---TTTG-AATGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................TT--TT---ATTTC-------TGTCGGGTGGT----------A--------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110

Generated: 05/18/2015 at 04:32 PM