ID:

dsi_28615

 Coordinate:

x:14952719-14952892 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

five_prime_UTR [x_14952893_14953076_-]; exon [x_14952893_14953076_-]; five_prime_UTR [x_14952649_14952718_-]; exon [x_14952288_14952718_-]; intron [x_14952719_14952892_-]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTGATCAGAGGAATATGAAAATAATCGAATCGAGACGGCACGTCTAAAAGGTGAGCTAATAAACTTTGGAATTTACATTGCAATTACATATGTACATATATTTTGGTCCATTACCAATGCGCTTACATATATTTACCCCTTTTTCGGAATACCAAACCGCTTTTTTACATAAAATCCGATCACGAAACGCATATTTATTAAATGACAGTATACACAATTCGCAGGTTGATGTACAATATTGTAACATTCAGTGCATAGCAACATCCAGTGCAGC
**************************************************(((((..........(((..(((((...(((..........(((.((((((...(((.((((...)))).)))...)))))).))).......(((((..........................))))).........))).......)))))..))).........)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M053
female body
 SRR902009
testis
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
.......................ATCGAATCGAGACGGCAC......................................................................................................................................................................................................................................... 18 0 1 3.00 3 1 0 0 2 0 0 0 0
.................AAAATAATCGAATCGAGACGGCACGT....................................................................................................................................................................................................................................... 26 0 1 2.00 2 1 0 0 0 1 0 0 0
...................AATAATCGAATCGAGACGGCAC......................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0
..................AAATAATCGAATCGAGACGGC........................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0
........................TCGAATCGAGACGGCACGT....................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
TTGATCAGAGGAATATGAAAATAATCGA...................................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................................................................AATATTGTAACATTCAGTGC.................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0
....TCAGAGGAATATGAAAATAATCGAATC................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0
.................AAAATAATCGAATCGAGACGGCACGG....................................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0
....................ATAATCGAATCGAGACGGCACGT....................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
................GAAAATAATCGAATCGAGACGGCACGT....................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0
..GATCAGAGGAATATGAAAATAATCGA...................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0
............ATATGAAAATAATCGAATCGAGA............................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0
..............ATGAAAATAATCGAATCGAGACGGCAC......................................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
.................AAAGTGATCGAATCGAGACGG............................................................................................................................................................................................................................................ 21 2 1 1.00 1 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................CATATTTATTGAATGACAGTA................................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0 0
...........AATATGAAAATAATCGAATCGAGAC.............................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................GTGCATAGCAACATCCAGT..... 19 0 1 1.00 1 0 0 0 0 0 0 1 0
......................AATCGAATCGAGACGGC........................................................................................................................................................................................................................................... 17 0 1 1.00 1 0 0 0 0 1 0 0 0
.............TAAGAAAATAGTCGAATAGAGA............................................................................................................................................................................................................................................... 22 3 2 0.50 1 0 0 0 0 0 0 0 1
...............................................AAGGTGAGCTAGTGAACT................................................................................................................................................................................................................. 18 2 11 0.18 2 0 0 0 2 0 0 0 0
.........GGAAGATGAAAATGATCGAGT.................................................................................................................................................................................................................................................... 21 3 7 0.14 1 0 0 0 0 0 1 0 0
..............AAGAAAATAGTCGAATAGAG................................................................................................................................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

AACTAGTCTCCTTATACTTTTATTAGCTTAGCTCTGCCGTGCAGATTTTCCACTCGATTATTTGAAACCTTAAATGTAACGTTAATGTATACATGTATATAAAACCAGGTAATGGTTACGCGAATGTATATAAATGGGGAAAAAGCCTTATGGTTTGGCGAAAAAATGTATTTTAGGCTAGTGCTTTGCGTATAAATAATTTACTGTCATATGTGTTAAGCGTCCAACTACATGTTATAACATTGTAAGTCACGTATCGTTGTAGGTCACGTCG
**************************************************(((((..........(((..(((((...(((..........(((.((((((...(((.((((...)))).)))...)))))).))).......(((((..........................))))).........))).......)))))..))).........)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M024
male body		 M025
embryo
 M053
female body
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
..CTAGTCTCATTATACTGTT............................................................................................................................................................................................................................................................. 19 2 1 2.00 2 0 0 2 0 0 0 0 0 0
...........................................................................................................................................................................TTTAGGCTAGTGCTTTGCGT................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TGTGTTAAGCGTCCAACTACATGTTATA................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0
........................................................................................................CCAGGTAATGGTTACGCGAAT..................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................GTGGTTTGGCGAAAAAATGTAT....................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTTTTAGGCTAGTGCTTTG...................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................TCGATTAGTTGAAACCTAAACT....................................................................................................................................................................................................... 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................CGATAAAATGTACTTTAGGC................................................................................................ 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................AAAGCCTTATGGTTT...................................................................................................................... 15 0 2 0.50 1 0 0 0 0 0 1 0 0 0
............................................................................................................GTAATGCTTACGCGA....................................................................................................................................................... 15 1 11 0.18 2 0 0 0 0 0 1 0 1 0
.................................................................................................................................................................AAAAATTTATTTTAGGCTAT............................................................................................. 20 2 7 0.14 1 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................AAATGTATTTGAGGCTAGAGG.......................................................................................... 21 3 10 0.10 1 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................................CGGGGATATGTGTTAAGC..................................................... 18 3 20 0.10 2 0 2 0 0 0 0 0 0 0
............................................................................................................................................AGAAGCCTTATGGTT....................................................................................................................... 15 1 12 0.08 1 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................AAAAAAGTATTTTAGGCCGG............................................................................................. 20 3 12 0.08 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................AATTTATTTTCGGCTAGT............................................................................................ 18 2 14 0.07 1 0 0 0 0 0 1 0 0 0
..........................CTTGGCTCTGACGTGC........................................................................................................................................................................................................................................ 16 2 19 0.05 1 0 0 0 0 0 0 0 0 1
..............................................................................................................................................................................................................................................AACTTTGTCAGTCGCGTAT................. 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:14952669-14952942 - dsi_28615 TTGATCAGAGGAATATGAAAATAATCGAATCGAGACGGCACGTCTAA----AAGGTGAGCTAATAAACTTTGGAATTTACATTGCAATTACATATGTA--------------CATATATTT-----TGGTCCATTACCAATGCGCTTA----CATATATTTACC--CCTTTTTCGGAATACCAAACCGCTTTT------------------------TT----------------ACATAAA-ATCCGATCA-----------CGAAACGCATATTTATTAAATGACAGTATACACAA---TTCGCAGGTTGATGTACAATATTGTAACATTCAG------TGCATAGCAACAT-CCAGTGCAGC
droSec2 scaffold_37:360491-360764 - TTGATCAGAGGAATATGAAAATAATCGAACCGAGACGGCACGTCTAA----AAGGTAAGCTAATAAACTTTGGAATTTACATTGCAATTACATATGTA--------------CATATATTT-----TGGTCCATTACCAATGCGCTTA----CATATATTTACC--AATTTTTCGGAATACCAAACCGATTTT------------------------TT----------------ACATAAA-ATCCGATCA-----------CGAAACGCATATTTATTAAATGACAGTATACACAA---TTCGCAGGTTGATGTACAATATTGTAACATTCAG------TGCATAGCAACAT-CCAGTGCAGC
dm3 chrX:15783716-15783991 - TTGATCAGAGGAATATGAAAATAATCGAATCGAGACGGCACGTCTAA----AAGGTGAGCTAATAAACTTTGGAATTTACATTGCAATTACATATGTA--------------CATATATTT-----TGGTCCATTACCATTGCGCTTA----CATATATTTACCACTTTTTTTCGGAATACCGAACCGCTTTT------------------------TT----------------ACATAAA-ATCCGAACA-----------CGAAACGCATATTTATTAAATGGCAGTATACACAA---TTCACAGGTTGATGTACAATATTGTAACATTCAG------TGCATAGCGACAT-CCAGTGCAGC
droEre2 scaffold_4690:11263716-11263979 + TTGAACACAGGAATATGAAAATAATCGAATCGAAACGGCACGTCTAA----AAGGTGAGCTAATAAACTTTGGAATTTACATTGCAATTACATATGTA--------------CATATATTT-----TGGTCCATTACCAATGCGCTCA----CATATATTCACA--CTTTTTTCGGAATACCGAAAAGGTTTT------------------------TT--TTTTACATTACATTACATTAAAA-----------------------------------CAAATGACGGTATACAC-A---TTCGCAGGTTGATGTACAATATTGTAACACTCAG------TGCATAGCGGCAT-CCAGTGCAGT
droYak3 X:9975166-9975430 - TTGAACACAGGAATATGAGAATAATCGAATCGAAACGGCACGTCTAA----AAGGTGAGCTAATAAACTTTGGAATTTACATTGCAATTACATATGTA--------------CATATATTT-----TGATCCATTACCAATGCGCTCA----CATACACTTACC--TATT-TTCGGAATACCGAACCGCTCTT------------------------TT----------------ACATAAA-ATCCGATAA-----------CGAA--------TAATCCAATGACAGTATACACAA---TTCGCAGGTTGATGTACAATATTGTAACATTCAG------TGCATAGCGACAT-CCAGTGAAGT
droEug1 scf7180000409765:134037-134306 - TTCAATATATGAATATGAAAATAAACGATTTGAGAAGACACTGATAA----AAGGTGAGCCGATAAACTTTGGAATTTACATTGCAATTATATATGTA--------------CATATTTTC-----TCGTTCCTTACTGATGCGCTTA----CATATATTTACC--TTCCTTTTGG-GTACAAAAC-GAATGT------------------------GTATATACAAAC------------------GATCATGTATTTATTGCGAAATGT------TTCAATTGACAAT--------------ATAGGTTGAAGTAAAATATTGTTATATCCAG-TTCAAAAAATAACACCAT-AAGGAGAAAA
droBia1 scf7180000302126:1236184-1236471 + CCAGATACATGAATATGAAAATAAACTTGTTGAAAAGGCACGGATAAGGGTAAGAGAAGCGAATAAACTTTGGAATTTACATTGCCATTACATATGCA--------------CATACATTGCGGTCCGGTCCATTACTGATGCGCTTGCACATATATATTTACC--TCCTTTTTGGCCTGCCAACCGGATTGT------------------------GTGTATTTAAAT------------------GATCATCCGTTCGTGACGGAATGCCCACTCCCCACCC-CCCATGA---CGG---CACACAGGTTGATGTACAGCATTGTAATAGTCAG------CGCATAACAACAT-C----GCAG-
droTak1 scf7180000415210:226602-226860 - TCACGCACGTGAATATGAAAATAAACGCCCTGAAAAGACACGGATAA----AGGGTAAGCGAGTAAACTTTGGAATTAACATTGCAATTACATATGTA--------------CATATATTG-----CGGTCCATTACTGATGCGCCTA----CATATATTTACC--TTCCTGTTGG-ATACCGCCC-GAATGT------------------------GTATATCTAAAT------------------GATCGTCTATTCATG--------------------------ATGG---CGA---TTTGCAGGTTGATGTACAATATTGCAATATTCAGACTCAGCGCATAACAACATCACAGTG-AGA
droEle1 scf7180000490751:123309-123601 + TTGAACATATGAATATGAAAATAAACGCTCTCGCAAGATACGGATAA----AAGGTAAGCCGATAAA-------ATTTACATTGCAATCAAATATATGTATACATACATTTATATATATAT-----TGGTTCATTACTTATGCGTTTA--------TATTTACC--TTCTTTTTGG-ATACTAACC-AAATGCGACTACATACATTTATGTACTTGTATATGTACGGAT------------------GATCATGTACTTACGGCAAAATGTACCTTCTTCAAATGATGATGA---AAA---AGCGTAGGTGGATGTGCAATATAT---AAATCCG------CGTACAAC-----------ATAAC
droRho1 scf7180000779623:115888-116186 + TTAAATATATGAATATGAAAGTAAACGTTTTAACAAGAGACGGATAA----AAGGTAAGCCGATAAA-------ATGTACATTGCAGTCAAATATATGTATACATACA----TATATATTT-----TGGTTCATTACTGATGCGTTTA--------TATTTACC--TTCTTTTTGG-ATACCAACC-AAATGCGAATACATACATTTATATACATATGCATGTATAAAT------------------GATCATGTACTTACGGAAAAATGCACGTTCTTCAAATGATGATGA---AAA---AGCGTAGATTGATGTGTAATAATATATTAAAAAG------CGTATAACATCAC-ACGG---AGA
droFic1 scf7180000454038:1051607-1051901 - TTCATCGAAGTCTTATAAAAATAAACATTTTTCAAAGTCACGACTGA----AAGGTAAGCCGATAAACTTCGGAATTTACATTGCATTTACATATGTG--------------AAT-TATTT-----TGGTCCATTTCTGATGCGTTTT--------TTTTTTTC--TTCTTTTTGG-ATGCTCACC-AAATGCATGTACATAA--------ACGTGGGTTTGTACGTAT------------------GACCACGTATTTACAACTAAATGTAAATTCTTGAAATGGCAATGACCAAAACCGTACATAGGTTGATGTATTATATTACAATATCCAG------CGCATAACATCAC-TAGGAG-GGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTGATCAGAGGAATATGAAAATAATCGAATCGAGACGGCACGTCTAA----AAGGTGAGCTAATAAACTTTGGAATTTACATTGCAATTACATATGTA--------------CATATATTT-----TGGTCCATTACCAATGCGCTTA----CATATATTTACC--CCTTTTTCGGAATACCAAACCGCTTTT------------------------TT----------------ACATAAA-ATCCGATCA-----------CGAAACGCATATTTATTAAATGACAGTATACACAA---TTCGCAGGTTGATGTACAATATTGTAACATTCAG------TGCATAGCAACAT-CCAGTGCAGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................ATCGAATCGAGACGGCAC....................................................................................................................................................................................................................................................................................................................................1813.00302100000000000000
.................AAAATAATCGAATCGAGACGGCACGT..................................................................................................................................................................................................................................................................................................................................2612.00200100010000000000
...................AATAATCGAATCGAGACGGCAC....................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
..................AAATAATCGAATCGAGACGGC......................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
........................TCGAATCGAGACGGCACGT..................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
TTGATCAGAGGAATATGAAAATAATCGA.................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................AATATTGTAACATTCAG------TGC.....................2011.00100010000000000000
....TCAGAGGAATATGAAAATAATCGAATC..............................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.................AAAATAATCGAATCGAGACGGCACGG..................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
....................ATAATCGAATCGAGACGGCACGT..................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
................GAAAATAATCGAATCGAGACGGCACGT..................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
..GATCAGAGGAATATGAAAATAATCGA.................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
............ATATGAAAATAATCGAATCGAGA..........................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
..............ATGAAAATAATCGAATCGAGACGGCAC....................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
...........AATATGAAAATAATCGAATCGAGAC.........................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................G------TGCATAGCAACAT-CCAGT.....1911.00100000000000100000
......................AATCGAATCGAGACGGC......................................................................................................................................................................................................................................................................................................................................1711.00100000010000000000
droSec2
TTGATCAGAGGAATATGAAAATAATCGAACCGAGACGGCACGTCTAA----AAGGTAAGCTAATAAACTTTGGAATTTACATTGCAATTACATATGTA--------------CATATATTT-----TGGTCCATTACCAATGCGCTTA----CATATATTTACC--AATTTTTCGGAATACCAAACCGATTTT------------------------TT----------------ACATAAA-ATCCGATCA-----------CGAAACGCATATTTATTAAATGACAGTATACACAA---TTCGCAGGTTGATGTACAATATTGTAACATTCAG------TGCATAGCAACAT-CCAGTGCAGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................ATCGAACCGAGACGGCACGTC.................................................................................................................................................................................................................................................................................................................................2111.0010100
.................AAAATAATCGAACCGAGACGG.......................................................................................................................................................................................................................................................................................................................................2111.0010100
........................................................................................................................T-----TGGTCCATTACCAATGCGC............................................................................................................................................................................................................................2011.0010100
..........................................................................................................................................................................................................................................................CA-----------CGAAACGCATATTTATTAA...................................................................................2111.0010010
.....................................................................................................................................................................................................................................................................................................CACAA---TTCGCAGGTTGATGTA................................................2111.0010010
.........................CGAACCGAGACGGCACGTC.................................................................................................................................................................................................................................................................................................................................1911.0010010
..................AAATAATCGAACCGAGACGGCACGTCTA...............................................................................................................................................................................................................................................................................................................................2811.0010001
........................................CGTCTAA----AAGGTAAGCTA...............................................................................................................................................................................................................................................................................................................1811.0011000
...................AATAATCGAACCGAGACGGCACGT..................................................................................................................................................................................................................................................................................................................................2411.0011000
..........GAATATGAAAATAATCGAACCGAGA..........................................................................................................................................................................................................................................................................................................................................2511.0010010
.........................CGAACCGAGACGGCACGT..................................................................................................................................................................................................................................................................................................................................1811.0010010
......................AATCGAACCGAGACGGCA.....................................................................................................................................................................................................................................................................................................................................1811.0010010
............ATATGAAAATAATCGAACCGAG...........................................................................................................................................................................................................................................................................................................................................2211.0010010
......................................CACGTCTAA----AAGGTAAGC.................................................................................................................................................................................................................................................................................................................1811.0010001
.........................................................................................................................................................................................................................................................................................................A---TTCGCAGGTTGATGTAC...............................................1811.0010010
...................AATAATCGAACCGAGACGGCA.....................................................................................................................................................................................................................................................................................................................................2111.0010010
....................ATAATCGAACCGAGACGGCACGT..................................................................................................................................................................................................................................................................................................................................2311.0010010
dm3
TTGATCAGAGGAATATGAAAATAATCGAATCGAGACGGCACGTCTAA----AAGGTGAGCTAATAAACTTTGGAATTTACATTGCAATTACATATGTA--------------CATATATTT-----TGGTCCATTACCATTGCGCTTA----CATATATTTACCACTTTTTTTCGGAATACCGAACCGCTTTT------------------------TT----------------ACATAAA-ATCCGAACA-----------CGAAACGCATATTTATTAAATGGCAGTATACACAA---TTCACAGGTTGATGTACAATATTGTAACATTCAG------TGCATAGCGACAT-CCAGTGCAGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................AATCGAATCGAGACGGCACGTCT................................................................................................................................................................................................................................................................................................................................23111.00110000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......................ATCGAATCGAGACGGCACGTCT................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GGAATATGAAAATAATCGAATCG.............................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATGAAAATAATCGAATCGAGA..........................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CACGTCTAA----AAGGTGAGC.................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AAATAATCGAATCGAGACGGCACG...................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........AATATGAAAATAATCGAATCGAGA..........................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................ATTCAG------TGCATAGCGACAT-CC........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...............TGAAAATAATCGAATCGAGA..........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGAGGAATATGAAAATAATCGAATCGA............................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................GCATAGCGACAT-CCAGTGCAG.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CGAATCGAGACGGCACGTCT................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CGGCACGTCTAA----AAGGTGAGC.................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..............ATGAAAATAATCGAATCGAGACGGC......................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................AACATTCAG------TGCATAGCGAC.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATAATCGAATCGAGACGGCACGTCTAA----..........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................AATCGAATCGAGACGGCACGTCTAA----AA........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................ACAATATTGTAACATTCAG------TGC.....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CGGCACGTCTAA----AAGGTTGA..................................................................................................................................................................................................................................................................................................................2021.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........AGGAATATGAAAATAATCGAAT...............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GAAAATAATCGAATCGAG...........................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AATAATCGAATCGAGACGGCACGTCT................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GAATCGAGACGGCACGTCTAA----A.........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CGAGACGGCACGTCTAA----AAG.......................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CGAATCGAGACGGCACGTCTAA----A.........................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AG------TGCATAGCGACAT-CCA.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATGAAAATAATCGAATCGA............................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GACGGCACGTCTAA----AAGGTGAG..................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.......................................................................................................................................................................................................................................................................................................................................ACATTCAG------TGCATAGCGACC............2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AATAATCGAATCGAGACGGCACGTCTAA----A.........................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CGTCTAA----AAGGTGAGCTAAT.............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................TCGAATCGAGACGGCACGTCTAA----AA........................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................ATTCAG------TGCATAGCGACAT-CCA.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AG------TGCATAGCGACAT-CCAGT.....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................ATACACAA---TTCACAGGTTGAT...................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................AACATTCAG------TGCATAGCGACAT-CC........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................G------TGCATAGCGACAT-CCAGT.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................CACAGGTTGATGTACAATATTGT.......................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGAGGAATATGAAAATAATCGAATC..............................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................T----------------ACATAAA-ATCCGAACA-----------CGAAA.................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................ATAATCGAATCGAGACGG.......................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................AATAATCGAATCGAGACGGC......................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AAATAATCGAATCGAGACGGCAC....................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................AA---TTCACAGGTTGATGTA................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CGAATCGAGACGGCACGTCTAA----AAGG......................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..........................................................................................................................................................................................................................................................................................................................................TTCAG------TGCATAGCGACAT-CCAGTGCAG.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CAA---TTCACAGGTTGATGTACAATATTGT.......................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TAGCGACAT-CCAGTGCAGC1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CGGCACGTCTAA----AAGGTT....................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AATCGAATCGAGACGGCACGTC.................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TATTGTAACATTCAG------TGCATAGCGACA............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TATACACAA---TTCACAGGTTGATG..................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................CAG------TGCATAGCGACAT-CCAGT.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................TCGAGACGGCACGTCTAA----AAGGTTGA..................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................ATTTATTAAATGGCAGTA..........................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.........GGAATATGAAAATAATCGAATCGAGAC.........................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................CATTCAG------TGCATAGCGAC.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TAAATGGCAGTATACACAA---TTCA............................................................2311.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCAGAGGAATATGAAAATAATCGAATCG.............................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATAATCGAATCGAGACGGCA.....................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........GGAATATGAAAATAATCGAATCGAGA..........................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GGAATATGAAAATAATCGA.................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AAAATAATCGAATCGAGA..........................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....CAGAGGAATATGAAAATAATCGAATCG.............................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TGGTCCATTACCATTGCGCTT..........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................AATGGCAGTATACACAA---TTCACAG.........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TACCACTTTTTTTCGGAATACCG......................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.................AAAATAATCGAATCGAGACGGT......................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.......................ATCGAATCGAGACGGCAC....................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GAATATGAAAATAATCGAATCGAGA..........................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................ATATTGTAACATTCAG------TGGTA...................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droEre2
TTGAACACAGGAATATGAAAATAATCGAATCGAAACGGCACGTCTAA----AAGGTGAGCTAATAAACTTTGGAATTTACATTGCAATTACATATGTA--------------CATATATTT-----TGGTCCATTACCAATGCGCTCA----CATATATTCACA--CTTTTTTCGGAATACCGAAAAGGTTTT------------------------TT--TTTTACATTACATTACATTAAAA-----------------------------------CAAATGACGGTATACAC-A---TTCGCAGGTTGATGTACAATATTGTAACACTCAG------TGCATAGCGGCAT-CCAGTGCAGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................GTAACACTCAG------TGCATAGCGGC.............2213.0030000120
......................................................................................................................................................................................................................................................................................................................................AACACTCAG------TGCATAGCGGC.............2012.0020000200
.........................................................................................................................................................................................................................................................................................................................................ACTCAG------TGCATAGCGGCAT-CCAGTGC...2611.0010000010
............ATATGAAAATAATCGAATCGAAACGGCAC....................................................................................................................................................................................................................................................................................................................................2911.0010100000
..............................................................................................................................................................................................................................................................................................................................................G------TGCATAGCGGCAT-CCAGTGCA..2211.0010000010
.........................CGAATCGAAACGGCACGTCTAA----AAGGTT....................................................................................................................................................................................................................................................................................................................2811.0010000100
................GAAAATAATCGAATCGAAACGGC......................................................................................................................................................................................................................................................................................................................................2311.0010000100
TTGAACACAGGAATATGAAAATAATC...................................................................................................................................................................................................................................................................................................................................................2611.0010100000
..........................................................................................................................................................................................................................................................................................................................GTACAATATTGTAACACTCAG------TGCATA..................2711.0011000000
.......................................................................................................................................................................................................................................................................................................................................ACACTCAG------TGCATAGCGGCAT-..........2111.0011000000
..................................................................................................................................................................................................................................................................................................................................TTGTAACACTCAG------TGCATAGCGGC.............2411.0010001000
droYak3
TTGAACACAGGAATATGAGAATAATCGAATCGAAACGGCACGTCTAA----AAGGTGAGCTAATAAACTTTGGAATTTACATTGCAATTACATATGTA--------------CATATATTT-----TGATCCATTACCAATGCGCTCA----CATACACTTACC--TATT-TTCGGAATACCGAACCGCTCTT------------------------TT----------------ACATAAA-ATCCGATAA-----------CGAA--------TAATCCAATGACAGTATACACAA---TTCGCAGGTTGATGTACAATATTGTAACATTCAG------TGCATAGCGACAT-CCAGTGAAGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................AATCGAATCGAAACGGCACGT..................................................................................................................................................................................................................................................................................................................................2113.00321000000000
......................................................................................................................................................................................................................................................................................................................................AACATTCAG------TGCATAGCGAC.............2011.00101000000000
.......................ATCGAATCGAAACGGCACGTCTAA----AAG.......................................................................................................................................................................................................................................................................................................................2711.00100000010000
........................................................................................................................................................................................................................................................................................................................................................ATAGCGACAT-CCAGTGAAGT2011.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................TGCATAGCGACAT-CCAGTGAAGT2311.00101000000000
..............ATGAGAATAATCGAATCGAAACGGC......................................................................................................................................................................................................................................................................................................................................2511.00100000010000
..GAACACAGGAATATGAGAA........................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..................................................................................................................................................................................................................................................................................................ATACACAA---TTCGCAGGTTGATGT.................................................2311.00100000010000
.TGAACACAGGAATATGAGAATAATCGAAT...............................................................................................................................................................................................................................................................................................................................................2911.00100000010000
...................................................................................................................................................................................................................................................................................................................................TGTAACATTCAG------TGCATAGCGAC.............2311.00101000000000
.TGAACACAGGAATATGAGA.........................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
......................................................................................................................................................................................................................................................................................................................................................GCATAGCGACAT-CCAGTGAA..2011.00101000000000
...............................GAAACGGCACGTCTAA----AA........................................................................................................................................................................................................................................................................................................................1811.00101000000000
....................................................................................................................................................................................................................................................................................................................................GTAACATTCAG------TGCATAGCGACAT-CC........2611.00101000000000
.........................................................................................................................................................................................................................................................................................................................................ATTCAG------TGCATAGCGACAT-CCAGTGAA..2711.00101000000000
...................................................................................................................................................A----CATACACTTACC--TATT-TTCG..............................................................................................................................................................................................2111.00101000000000
............................................................................................................................................................................................................................................................................................GACAGTATACACAA---TTCGCAG.........................................................2111.00101000000000
droEug1
TTCAATATATGAATATGAAAATAAACGATTTGAGAAGACACTGATAA----AAGGTGAGCCGATAAACTTTGGAATTTACATTGCAATTATATATGTA--------------CATATTTTC-----TCGTTCCTTACTGATGCGCTTA----CATATATTTACC--TTCCTTTTGG-GTACAAAAC-GAATGT------------------------GTATATACAAAC------------------GATCATGTATTTATTGCGAAATGT------TTCAATTGACAAT--------------ATAGGTTGAAGTAAAATATTGTTATATCCAG-TTCAAAAAATAACACCAT-AAGGAGAAAASizeHit CountTotal NormTotal
No Reads
droBia1
CCAGATACATGAATATGAAAATAAACTTGTTGAAAAGGCACGGATAAGGGTAAGAGAAGCGAATAAACTTTGGAATTTACATTGCCATTACATATGCA--------------CATACATTGCGGTCCGGTCCATTACTGATGCGCTTGCACATATATATTTACC--TCCTTTTTGGCCTGCCAACCGGATTGT------------------------GTGTATTTAAAT------------------GATCATCCGTTCGTGACGGAATGCCCACTCCCCACCC-CCCATGA---CGG---CACACAGGTTGATGTACAGCATTGTAATAGTCAG------CGCATAACAACAT-C----GCAG-SizeHit CountTotal NormTotal
No Reads
droTak1
TCACGCACGTGAATATGAAAATAAACGCCCTGAAAAGACACGGATAA----AGGGTAAGCGAGTAAACTTTGGAATTAACATTGCAATTACATATGTA--------------CATATATTG-----CGGTCCATTACTGATGCGCCTA----CATATATTTACC--TTCCTGTTGG-ATACCGCCC-GAATGT------------------------GTATATCTAAAT------------------GATCGTCTATTCATG--------------------------ATGG---CGA---TTTGCAGGTTGATGTACAATATTGCAATATTCAGACTCAGCGCATAACAACATCACAGTG-AGASizeHit CountTotal NormTotal
No Reads
droEle1
TTGAACATATGAATATGAAAATAAACGCTCTCGCAAGATACGGATAA----AAGGTAAGCCGATAAA-------ATTTACATTGCAATCAAATATATGTATACATACATTTATATATATAT-----TGGTTCATTACTTATGCGTTTA--------TATTTACC--TTCTTTTTGG-ATACTAACC-AAATGCGACTACATACATTTATGTACTTGTATATGTACGGAT------------------GATCATGTACTTACGGCAAAATGTACCTTCTTCAAATGATGATGA---AAA---AGCGTAGGTGGATGTGCAATATAT---AAATCCG------CGTACAAC-----------ATAACSizeHit CountTotal NormTotal
No Reads
droRho1
TTAAATATATGAATATGAAAGTAAACGTTTTAACAAGAGACGGATAA----AAGGTAAGCCGATAAA-------ATGTACATTGCAGTCAAATATATGTATACATACA----TATATATTT-----TGGTTCATTACTGATGCGTTTA--------TATTTACC--TTCTTTTTGG-ATACCAACC-AAATGCGAATACATACATTTATATACATATGCATGTATAAAT------------------GATCATGTACTTACGGAAAAATGCACGTTCTTCAAATGATGATGA---AAA---AGCGTAGATTGATGTGTAATAATATATTAAAAAG------CGTATAACATCAC-ACGG---AGASizeHit CountTotal NormTotal
No Reads
droFic1
TTCATCGAAGTCTTATAAAAATAAACATTTTTCAAAGTCACGACTGA----AAGGTAAGCCGATAAACTTCGGAATTTACATTGCATTTACATATGTG--------------AAT-TATTT-----TGGTCCATTTCTGATGCGTTTT--------TTTTTTTC--TTCTTTTTGG-ATGCTCACC-AAATGCATGTACATAA--------ACGTGGGTTTGTACGTAT------------------GACCACGTATTTACAACTAAATGTAAATTCTTGAAATGGCAATGACCAAAACCGTACATAGGTTGATGTATTATATTACAATATCCAG------CGCATAACATCAC-TAGGAG-GGASizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 07:48 PM