ID:

dsi_28512

 Coordinate:

2r:15675011-15675160 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.8 -23.4 -23.2

Flybase annnotation

five_prime_UTR [2r_15674953_15675010_-]; exon [2r_15674860_15675010_-]; intron [2r_15675011_15681860_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTAGTTATTTCAGTGGAGTTCAGTTTCAGAATTAACTATTCTTTGTACGGCTGTAATTACTGCCTCTTTTTTTAATAAATTTCCTTTCCGATATATCGCACCGGCTTTTTACGACTACCATCACTAATCAGCAATCGGTGTCGTAGAAACAGTGTGACCAGACATCCGCCCATATAGTTTGTTTTTTTTTCACCTAGCAGAGAAACAAAAGAATTGACAATTTAGCCGCAGATCAGACGACGCAAATCCC
**************************************************.........((((................................((((((....((((((((((.(((((..((....))..)).)))))))))))))..)))))).(((((.............)))))...............))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR902009
testis
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
...............................................................................................................................................................................................................................AGCCGCAGATCAGACGAC......... 18 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GACAATTTAGCCGCAGATCAGACGA.......... 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GCAGATCGGACGACGC....... 16 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTTAGCCGCAGATCAGACGACGCAAA.... 26 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
..............................................................................................................................................................................................................................TAGCCGCAGATCAGACGAC......... 19 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................AGCCGCAGATCAGACGACGC....... 20 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CCTCAGATCAGACGA.......... 15 1 2 1.50 3 0 0 0 0 2 0 0 0 1 0
.......................................................................................................................................................................................................................GACAATTTAGCCGCAGATCAGACGAC......... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TAGCCGCAGATCAGACGA.......... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................GACAATTTAGCCGCAGATCAGAC............ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TAGCCGCAGATCAGACGACG........ 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................ACAATTTAGCCGCAGATCAGACGA.......... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................ACCTAGCAGAGAAACAAAAGAATTGAC................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTTAGCCGCAGATCAGAC............ 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TAGCCGCAGATCAGACGG.......... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................ATATAGTTTGTTTTTTTTTCACCTAGCAG.................................................. 29 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................TTTAGCCGCAGATCAGACGACGCAAAT... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CCTCAGATCAGACGAG......... 16 2 20 0.55 11 0 0 0 0 8 0 0 0 3 0
......ATTTCAGTGGAGTGAAGTT................................................................................................................................................................................................................................. 19 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0
..........CAGAGGGGTTCAGCTTCAGA............................................................................................................................................................................................................................ 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................TGACCAGAAGACCGCCCATA............................................................................ 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 1
................................................................................................................................................................................................................................ACCTCAGATCAGACGA.......... 16 2 20 0.10 2 0 0 0 0 2 0 0 0 0 0
.............................................................................................................................................CGTACAATCAGTGTGAGCA.......................................................................................... 19 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TTTTGTTCAACTAGCAGA................................................. 18 2 15 0.07 1 0 0 0 0 0 0 0 0 1 0
.TAGTTATTCCCGTGGA......................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

AATCAATAAAGTCACCTCAAGTCAAAGTCTTAATTGATAAGAAACATGCCGACATTAATGACGGAGAAAAAAATTATTTAAAGGAAAGGCTATATAGCGTGGCCGAAAAATGCTGATGGTAGTGATTAGTCGTTAGCCACAGCATCTTTGTCACACTGGTCTGTAGGCGGGTATATCAAACAAAAAAAAAGTGGATCGTCTCTTTGTTTTCTTAACTGTTAAATCGGCGTCTAGTCTGCTGCGTTTAGGG
**************************************************.........((((................................((((((....((((((((((.(((((..((....))..)).)))))))))))))..)))))).(((((.............)))))...............))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
.......................................................................................................................................................................................AAAAAAAGTGGCTCGTCT................................................. 18 1 1 1.00 1 0 1 0 0 0
........................................................................................................................................................................................................................TGTTAAATCGGCGTCTAGTCT............. 21 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................TTTAAATCGGCGTCTAGTCTGC........... 22 1 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................ATAAAAAAAAAGTGGATCG.................................................... 19 1 2 0.50 1 0 0 1 0 0
......................................................................................AGGCTATAGAGCGCGGCCGA................................................................................................................................................ 20 2 4 0.25 1 0 0 0 1 0
..............................................................GGAGAAAATAATTATT............................................................................................................................................................................ 16 1 9 0.11 1 0 0 0 0 1
...................................................................................................TGGCCGAAAACTGCT........................................................................................................................................ 15 1 12 0.08 1 0 0 1 0 0
..........................................................................................................................................AGAGCACCTTTGTCACA............................................................................................... 17 2 12 0.08 1 0 1 0 0 0
...........................................................................................................................................................................................AAATTGGATCGTCACT............................................... 16 2 20 0.05 1 0 1 0 0 0
......................................................................................................................................................................................AAAAAAAAGTTGATCGTT.................................................. 18 2 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:15674961-15675210 - dsi_28512 TTAGT---------------TAT---------------------------------TTCAGTGGAGTTCAGTTTCAGAATTAACT-ATTCTTTGTAC------GGCTGT-------AATTACTGCCTCTTTTTTTAATAAATTTC-----------------------------------------------------------------------------------------C--------------------------------------------------------------------------------------------------TTTCCGATATA-----TCG--CACCG--GCTTTT-TACGACTACCATCACTAATCAGCAATCGGTGTCGTAGAAACAGTGTGACCAGACATCCGCCC-ATATAGTTTGTTTTTTT--TT--CACCTAGCAGAGAAACAAAAGAATT-GACAATTTA------------GCCG----------CAGATCAGAC-------GACGCAAATCCC------
droSec2 scaffold_1:12537598-12537852 - TTAGT---------------TAT---------------------------------TTCAGTCAAGTTAAGTTTTAGAATTAACC-ATTCTTTGTAC------GGCTAT-------AATTACTAGTTCT-TTTTTAATAAATTTC-----------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------TTTCCGATATATCATATCG--CACCG--GCTTTT-TACGACTACCATCACTAATCATCAATCAGTGTCGTAGAAACAGTGTGACCAGACATCCGCCC-ATATAGTTTGTTTTTTT-TTT--CACCTAGCAGAGAAACAAAAGAATT-GACAATTTA------------GCCG----------CAGATCAGAC-------GACGCAAATCCC------
dm3 chr2R:15024557-15024803 - TTAGT---------------TAT---------------------------------TTCAGTTGAGTTCAGTTTTAGAATTAGCT-ATTATTTGTAC------GGCTAT-------AATTACTAGCTCGTTTTTTAATAAATT-C-----------------------------------------------------------------------------------------C--------------------------------------------------------------------------------------------------CTGACGATATA-----TCG--TACCG--GCTTTT-TACGACTACCATCACTAATCAGCAATCGGTGTCGTAGAAATGGTGTGACCAGACCTCCGCTC-ATAAAGTTTGTTTTT----TT--CACCTAGCAGAGAAACAAAAGAATT-GACAATTTA------------GCCG----------CAGATCAGAC-------GACGCAAATCCC------
droEre2 scaffold_4845:9224238-9224480 - CAAAT---------------TAG---------------------------------TTCAATACATTTCAGTTTTATAATTAACC-A----------GCTTAAACTTGT-------AATCAACTAAAC--TTTCGAATTAATT-T-----------------------------------------------------------------------------------------C--------------------------------------------------------------------------------------------------CAGACGATATA-----TCG--TACCG--GCTTTT-TACGATTACCATCACTAACCAGCAATCGGTGTCGTACGAACAGTGTGACCAGACCTCCGCAC-ATACAGTTTGTTTTTTT--TT--CACACAGCACAGAAACAAAAGAATC-GGCAATTTA------------GCCG----------CAGATCAGAC-------GGCGCAAATCCC------
droYak3 2R:14155561-14155803 + TAAAT---------------CCA---------------------------------TTCA---------AGCTATATAATTAAATAA----------ACATAAACTTGTTATCTATAATTAAATAAAC--TTATGAATTAAAT-C-----------------------------------------------------------------------------------------C--------------------------------------------------------------------------------------------------CTGACGATATA-----TTG--TGCCG--GCTTTT-TACGCTTCCCATCTCTAACCAGGAATCGGTGTAGTACAAACAGTGTGACCAGACCTCCACCC-ATACAGTTTGTTTTTTT-TTT--CACACAGCACAGAAACAAAAGAATC-GGCAATTTA------------GCCG----------CAGATCAGAC-------GGCGCAAATCCC------
droEug1 scf7180000409663:285557-285727 + C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--------------------------------------------------------------------------------------------------CTAACAATAT-------TGCTTACCG--GCATTT-CACGACTACCACCACTAATACGCTATCGATGGGTCGCATACAGTGTTACCAGACTTCCGCCCCTTAGAGTTTGTATTTTTTATT--TGGGAAGCTCAGAAACAAAAGAAAT-TGCAATTTA------------GCCG----------CACAGCAGAC-------GGCGCAAATCCA------
droBia1 scf7180000302292:1319039-1319286 + TTGGT----------------AT---------------------------------TACATT-------AGTTTT----TCAACT-GTTCTTAATATGCT-------------------------------------TAATTTTTCCCAACTG----------------------------------------------------T----GACAATAGACAATGGTA---ATCGC--------------------------------------------------------------------------------------------------CAACCGATAAC-----TCGCTTGCCG--GCGTTT-TACGTTTGCCATCACTAGGCCTCTATCGATGGGCCGC-CGCAGTGTGACCAGACCTCCGCCCCATCGAGTTTGTTTTTTT--TTCACACGGAGCCCAGAAACAAAAGAAAT-CGCCATTTA------------GCCG----------CAGAGCAGAC-------GGCGCAAACCGA------
droTak1 scf7180000415991:538219-538553 - TTTAAATTTACTTTAAATGTTTGTTTATTTAATTTCCGATTTTTAATTATTTTAAATACATT-------AGTTT-----TCAACC---------------------------------------TAA-------------GA----GCATACTTTTAAAATTAAATAATGCCTCATTTATAAATTTATACTTTAAAATAAAAATTTGAACATCCATAAAATATCGTTATTTTCAC--------------------------------------------------------------------------------------------------TTAACAATATA-----TCGCTCGCCG--GCGTTT-CACGTCTACCACCTCTAGTCGTCTATCGATGGCCCGCTCGCAGTGTGACCAGACTTCCGCCCCTTAGAGTTTGTTTTTT---TC--CACGGAGCCCAGAAACAAAAGAAAT-TGCCATTTA------------GCCG----------AAGAGCAGAC-------GGCGCAGATCCA------
droEle1 scf7180000491152:87770-87933 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATA-----TCG--CTTCACTACTT-A-TTCGACTACCCCTACTAATCGGTTATCGATGGCCCGCAAACAGTGTGGCCAGACTTTCGCCCCGCGCAGTTTGTTTTTTT--TT--CGCGGAGCTCAGTAACAAAAGAAAT-TGCAATTTA------------GCCG----------CAGAGCAGAC-------GGTGCAGATCCA------
droRho1 scf7180000780106:238165-238367 + TAA-------------------------------------------------------------------------------------------------------------------TTACTTCTTAATTTTTTTATAATTCTTC----------------------------------------------------------------------------------------C------------------------------------------------------------------------------------------------CACCGACGATATA-----TCG--CTTCA--TCTCTTAACCGACTACCTCTACTAATCGGACATCGATAGCCCGCAGACAGTGTGGCCAGACTTCCATCCCTTGAAGTTTGTTTTTTT-TTT--CACGGAGCTCAGAAACAAAAGAATT-TGCAATTTA------------GCCG----------AAGAGCAGAC-------GGTGCAGATCCA------
droFic1 scf7180000454044:835078-835382 - TTAGC---------------GCA------------------------------------A---------AGC--------------------------------------------AATTAAATGAAG--T------TTAAGT-C-----------------------------------------------------------------------------------------ACTGCTGTTAGAAGAAAGTTCCGTTAAATTGTTCTTATTTATTTGAATTTAAGTTATTTGGTCAGAAATTTTTGTTTTTGTAAATTTGCAAAGCGCCC-TTCGAGTTGTA-----TCGACTTCCT--ACTTTT-TACGAATTCCGCCAATAAAAAGTCATCGATAACCTTCATTCAGTGTGACCAGACTTCCACCC-TTA-GGTTTGTTTTTTTTTCT--CACGGAGCACAGAAACAAAAGAATT-AGCAATTTA------------GCCG----------CAGAGCAGAC-------GGAGCAGATCCATTTTCC
droKik1 scf7180000302682:822705-822840 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAATCGGCTATTAGTA------------------TAAACGTCCACCCCTTGAAGTTTGTTTTTTT--TT--C-----GCTGAGAAACAAAAGATTTTCGCAAATTACTAGAAGACAGCCCAGCAGATTAGATTAGCTCGGCAGGCAGCAGCAGCAAGCAGC------
droAna3 scaffold_13266:12753996-12754054 + AGGA----------------------------------------------------------------------------------------------------------------------------------------------GC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATTGAGAATA-TACGATCCA------------GATC----------TAGATCGGAGGGCCGC--GAGCGGACAGC------
droBip1 scf7180000396372:234175-234246 + TTTTT---------------TCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--ATT--GGCGAAGCGGTGCAGCAACAAAAAT-TGCAATTTA------------GGAG----------CAAAATAGAA-------AATATAAGTATC------
droWil2 scf2_1100000004822:1705092-1705103 - G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-------GACATAGT---C------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTAGT---------------TAT---------------------------------TTCAGTGGAGTTCAGTTTCAGAATTAACT-ATTCTTTGTAC------GGCTGT-------AATTACTGCCTCTTTTTTTAATAAATTTC-----------------------------------------------------------------------------------------C--------------------------------------------------------------------------------------------------TTTCCGATATA-----TCG--CACCG--GCTTTT-TACGACTACCATCACTAATCAGCAATCGGTGTCGTAGAAACAGTGTGACCAGACATCCGCCC-ATATAGTTTGTTTTTTT--TT--CACCTAGCAGAGAAACAAAAGAATT-GACAATTTA------------GCCG----------CAGATCAGAC-------GACGCAAATCCC------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------GCCG----------CAGATCAGAC-------GAC...............1814.00440000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATTTA------------GCCG----------CAGATCAGAC-------GA................2513.00330000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTA------------GCCG----------CAGATCAGAC-------GACGCAAA..........2612.00200000020000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------------GCCG----------CAGATCAGAC-------GAC...............1912.00211000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------GCCG----------CAGATCAGAC-------GACGC.............2012.00210000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATTTA------------GCCG----------CAGATCAGAC-------GAC...............2611.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------------GCCG----------CAGATCAGAC-------GA................1811.00100000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATTTA------------GCCG----------CAGATCAGAC-------..................2311.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------------GCCG----------CAGATCAGAC-------GACG..............2011.00100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATTTA------------GCCG----------CAGATCAGAC-------GA................2411.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTAGCAGAGAAACAAAAGAATT-GAC...................................................................2711.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTA------------GCCG----------CAGATCAGAC-------..................1811.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------------GCCG----------CAGATCAGAC-------GG................1811.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAGTTTGTTTTTTT--TT--CACCTAGCAG......................................................................................2911.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTA------------GCCG----------CAGATCAGAC-------GACGCAAAT.........2711.00101000000000000000
droSec2
TTAGT---------------TAT---------------------------------TTCAGTCAAGTTAAGTTTTAGAATTAACC-ATTCTTTGTAC------GGCTAT-------AATTACTAGTTCT-TTTTTAATAAATTTC-----------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------TTTCCGATATATCATATCG--CACCG--GCTTTT-TACGACTACCATCACTAATCATCAATCAGTGTCGTAGAAACAGTGTGACCAGACATCCGCCC-ATATAGTTTGTTTTTTT-TTT--CACCTAGCAGAGAAACAAAAGAATT-GACAATTTA------------GCCG----------CAGATCAGAC-------GACGCAAATCCC------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------------GCCG----------CAGATCAGAC-------GA................1811.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTA------------GCCG----------CAGATCAGAC-------GA................2111.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------GCCG----------CAGATCAGAC-------GACGCAAA..........2311.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-GACAATTTA------------GCCG----------CAGATCAGAC-------GA................2611.0011000
dm3
TTAGT---------------TAT---------------------------------TTCAGTTGAGTTCAGTTTTAGAATTAGCT-ATTATTTGTAC------GGCTAT-------AATTACTAGCTCGTTTTTTAATAAATT-C-----------------------------------------------------------------------------------------C--------------------------------------------------------------------------------------------------CTGACGATATA-----TCG--TACCG--GCTTTT-TACGACTACCATCACTAATCAGCAATCGGTGTCGTAGAAATGGTGTGACCAGACCTCCGCTC-ATAAAGTTTGTTTTT----TT--CACCTAGCAGAGAAACAAAAGAATT-GACAATTTA------------GCCG----------CAGATCAGAC-------GACGCAAATCCC------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGAGAAACAAAAGAA.........................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000000100000000000000000000020000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTA------------GCCG----------CAGATCAGAC-------GACGC.............2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCG----------CAGATCAGAC-------GACG..............1813.0030000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATTTA------------GCCG----------CAGAT..............................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTA------------GCCG----------CAGATCAGAC-------GACGCAAA..........2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAACAAAAGAATT-GAC...................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAAACAAAAGAATT-GAC...................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG----------CAGATCAGAC-------GACGCAAA..........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------GCCG----------CAGATCAGAC-------GACGC.............2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTA------------GCCG----------CAGATCAGAC-------GACGC.............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGAGAAACAAAAGAAT........................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------GCCG----------CAGATCAGAC-------GACGCAAATCC.......2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTAGCAGAGAAACAAAAGAA.........................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------GCCG----------CAGATCAGAC-------GACG..............1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA------------GCCG----------CAGATCAGAC-------GACGCAAA..........2511.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------------GCCG----------CAGATCAGAC-------GACGC.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATTTA------------GCCG----------CAGATCAGAC-------GA................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................AATCGGTGTCGTAGAAATGGTG.........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTA------------GCCG----------CAGATCAGAC-------GA................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAAACAAAAGAATT-GA....................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTAGCAGAGAAACAAAAG...........................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................AATCGGTGTCGTAGAAATG............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................CGTAGAAATGGTGTGACCAGACCT..............................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCG----------CAGATCAGAC-------GACGCAA...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGCTC-ATAAAGTTTGT............................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT-GACAATTTA------------GCCG----------CAGATCA............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------------GCCG----------CAGATCAGAC-------GACGCAAAT.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCG----------CAGATCAGAC-------GACGC.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTA------------GCCG----------CAGATCAGAC-------GACGCAAA..........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAATT-GACAATTTA------------GCCG----------CAG................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTAGCAGAGAAACAAAAGAA.........................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAAACAAAAGAATT-GACAATT...............................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTA------------GCCG----------CAGATCAGA..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CAGACCTCCGCTC-ATAAAGTTTGT............................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACCAGACCTCCGCTC-AT.....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................ATCGGTGTCGTAGAAATGGT..........................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCG----------CAGATCAGAC-------GACGC.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAATT-GACAATTTA------------GCCG----------...................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTGTGACCAGACCTCCG...........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................ATCGGTGTCGTAGAAATGGTGT........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------GCCG----------CAGATCAGAC-------GACGCAAATCCC------2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CAAAT---------------TAG---------------------------------TTCAATACATTTCAGTTTTATAATTAACC-A----------GCTTAAACTTGT-------AATCAACTAAAC--TTTCGAATTAATT-T-----------------------------------------------------------------------------------------C--------------------------------------------------------------------------------------------------CAGACGATATA-----TCG--TACCG--GCTTTT-TACGATTACCATCACTAACCAGCAATCGGTGTCGTACGAACAGTGTGACCAGACCTCCGCAC-ATACAGTTTGTTTTTTT--TT--CACACAGCACAGAAACAAAAGAATC-GGCAATTTA------------GCCG----------CAGATCAGAC-------GGCGCAAATCCC------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCACAGAAACAAAAGAA.........................................................................2011.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGAC-------GGCGCAAATCC.......1811.0010100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------CAGATCAGAC-------GGCGCAAATCCC------2311.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG----------CAGATCAGAC-------GGCGCAAATCCC------2411.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTA------------GCCG----------CAGATCAGAC-------GG................2211.0011000000
droYak3
TAAAT---------------CCA---------------------------------TTCA---------AGCTATATAATTAAATAA----------ACATAAACTTGTTATCTATAATTAAATAAAC--TTATGAATTAAAT-C-----------------------------------------------------------------------------------------C--------------------------------------------------------------------------------------------------CTGACGATATA-----TTG--TGCCG--GCTTTT-TACGCTTCCCATCTCTAACCAGGAATCGGTGTAGTACAAACAGTGTGACCAGACCTCCACCC-ATACAGTTTGTTTTTTT-TTT--CACACAGCACAGAAACAAAAGAATC-GGCAATTTA------------GCCG----------CAGATCAGAC-------GGCGCAAATCCC------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCG----------CAGATCAGAC-------GGCG..............1811.00110000000000
droEug1
C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--------------------------------------------------------------------------------------------------CTAACAATAT-------TGCTTACCG--GCATTT-CACGACTACCACCACTAATACGCTATCGATGGGTCGCATACAGTGTTACCAGACTTCCGCCCCTTAGAGTTTGTATTTTTTATT--TGGGAAGCTCAGAAACAAAAGAAAT-TGCAATTTA------------GCCG----------CACAGCAGAC-------GGCGCAAATCCA------SizeHit CountTotal NormTotal
No Reads
droBia1
TTGGT----------------AT---------------------------------TACATT-------AGTTTT----TCAACT-GTTCTTAATATGCT-------------------------------------TAATTTTTCCCAACTG----------------------------------------------------T----GACAATAGACAATGGTA---ATCGC--------------------------------------------------------------------------------------------------CAACCGATAAC-----TCGCTTGCCG--GCGTTT-TACGTTTGCCATCACTAGGCCTCTATCGATGGGCCGC-CGCAGTGTGACCAGACCTCCGCCCCATCGAGTTTGTTTTTTT--TTCACACGGAGCCCAGAAACAAAAGAAAT-CGCCATTTA------------GCCG----------CAGAGCAGAC-------GGCGCAAACCGA------SizeHit CountTotal NormTotal
No Reads
droTak1
TTTAAATTTACTTTAAATGTTTGTTTATTTAATTTCCGATTTTTAATTATTTTAAATACATT-------AGTTT-----TCAACC---------------------------------------TAA-------------GA----GCATACTTTTAAAATTAAATAATGCCTCATTTATAAATTTATACTTTAAAATAAAAATTTGAACATCCATAAAATATCGTTATTTTCAC--------------------------------------------------------------------------------------------------TTAACAATATA-----TCGCTCGCCG--GCGTTT-CACGTCTACCACCTCTAGTCGTCTATCGATGGCCCGCTCGCAGTGTGACCAGACTTCCGCCCCTTAGAGTTTGTTTTTT---TC--CACGGAGCCCAGAAACAAAAGAAAT-TGCCATTTA------------GCCG----------AAGAGCAGAC-------GGCGCAGATCCA------SizeHit CountTotal NormTotal
No Reads
droEle1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATATA-----TCG--CTTCACTACTT-A-TTCGACTACCCCTACTAATCGGTTATCGATGGCCCGCAAACAGTGTGGCCAGACTTTCGCCCCGCGCAGTTTGTTTTTTT--TT--CGCGGAGCTCAGTAACAAAAGAAAT-TGCAATTTA------------GCCG----------CAGAGCAGAC-------GGTGCAGATCCA------SizeHit CountTotal NormTotal
No Reads
droRho1
TAA-------------------------------------------------------------------------------------------------------------------TTACTTCTTAATTTTTTTATAATTCTTC----------------------------------------------------------------------------------------C------------------------------------------------------------------------------------------------CACCGACGATATA-----TCG--CTTCA--TCTCTTAACCGACTACCTCTACTAATCGGACATCGATAGCCCGCAGACAGTGTGGCCAGACTTCCATCCCTTGAAGTTTGTTTTTTT-TTT--CACGGAGCTCAGAAACAAAAGAATT-TGCAATTTA------------GCCG----------AAGAGCAGAC-------GGTGCAGATCCA------SizeHit CountTotal NormTotal
No Reads
droFic1
TTAGC---------------GCA------------------------------------A---------AGC--------------------------------------------AATTAAATGAAG--T------TTAAGT-C-----------------------------------------------------------------------------------------ACTGCTGTTAGAAGAAAGTTCCGTTAAATTGTTCTTATTTATTTGAATTTAAGTTATTTGGTCAGAAATTTTTGTTTTTGTAAATTTGCAAAGCGCCC-TTCGAGTTGTA-----TCGACTTCCT--ACTTTT-TACGAATTCCGCCAATAAAAAGTCATCGATAACCTTCATTCAGTGTGACCAGACTTCCACCC-TTA-GGTTTGTTTTTTTTTCT--CACGGAGCACAGAAACAAAAGAATT-AGCAATTTA------------GCCG----------CAGAGCAGAC-------GGAGCAGATCCATTTTCCSizeHit CountTotal NormTotal
No Reads
droKik1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAATCGGCTATTAGTA------------------TAAACGTCCACCCCTTGAAGTTTGTTTTTTT--TT--C-----GCTGAGAAACAAAAGATTTTCGCAAATTACTAGAAGACAGCCCAGCAGATTAGATTAGCTCGGCAGGCAGCAGCAGCAAGCAGC------SizeHit CountTotal NormTotal
No Reads
droAna3
AGGA----------------------------------------------------------------------------------------------------------------------------------------------GC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATTGAGAATA-TACGATCCA------------GATC----------TAGATCGGAGGGCCGC--GAGCGGACAGC------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
AGGA----------------------------------------------------------------------------------------------------------------------------------------------GC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATTGAGAATA-......................................................................1912.002000002
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------GATC----------TAGATCGGAGGGC......................1912.002000002
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-TACGATCCA------------GATC----------TAGAT..............................1911.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-TACGATCCA------------GATC----------TAGATCGGAGGGC......................2711.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCA------------GATC----------TAGATCGGAGGGC......................2011.001000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCGGAGGGCCGC--GAGC.............1911.001010000
droBip1
TTTTT---------------TCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--ATT--GGCGAAGCGGTGCAGCAACAAAAAT-TGCAATTTA------------GGAG----------CAAAATAGAA-------AATATAAGTATC------SizeHit CountTotal NormTotal
No Reads
droWil2
G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-------GACATAGT---C------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads

Generated: 05/18/2015 at 10:46 AM