ID:

dsi_28505

 Coordinate:

2l:12276475-12276711 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

three_prime_UTR [2l_12276712_12277674_+]; exon [2l_12276712_12277674_+]; three_prime_UTR [2l_12276378_12276474_+]; exon [2l_12274747_12276474_+]; intron [2l_12276475_12276711_+]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAAGACAGTGCAATGTGCGGGAGAAATCGAAGGAAGCTTAGCAACAGCAGGTGTGTACTCCTTTAAAAGATATATTTATAAATAGATACATTTATTACTATAAAACAAATGGATAAAAACGTAATTGTTTTGACAATATTCCGTTTATTTCTTAAATATTTCGTATGTTTCTTAAAGTTGATAATATCTTGAAAATTGAACAAATTTTTATTTTATTTTTAAGATTAGATATTTGTTAATGACTATCCCAACTAACGTTATCTTTTACTCTGCTTATTATCTTGCAGGTTCAAAGTCGCAAACACATCAAATACTAGCATAATTCTGTACTACGGAT
**************************************************.............(((((((((((((((.((((((((.....((((....(((((((((((........)))..))))))))..))))....))))))))..))))))(((((.(((((((........)).)))))..)))))....(((((((.(((((((((....))))).)))).))))))).....................)))))))))..((((..........))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 M024
male body
..................................................................................................................................................................................................................................................................................................CAAAGTCGCAAACACATCAAATACTAGC................... 28 0 1 1.00 1 1 0 0 0 0 0 0
.........................ATCGAAGGAAGCTTAGCAACAGCAGGTTC........................................................................................................................................................................................................................................................................................... 29 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................ATACGTGATTGTTTTGAC........................................................................................................................................................................................................... 18 2 4 0.50 2 0 1 1 0 0 0 0
.....................................................................................................................................................................................................................................TATTTATTAGTGACTATCC......................................................................................... 19 2 5 0.20 1 0 0 0 1 0 0 0
.......................................AGCACAAGCAGGTGTGGACT...................................................................................................................................................................................................................................................................................... 20 3 6 0.17 1 0 1 0 0 0 0 0
...................................................................................................................AATACGTGATTGTTTTGACG.......................................................................................................................................................................................................... 20 3 9 0.11 1 0 0 0 0 1 0 0
................................................................................................................................................................................................................TGTTTTAATTTTAAGATTAGG............................................................................................................ 21 3 15 0.07 1 0 0 0 0 0 1 0
............................................................................................................................................................................................................................................................................................CAGGTTCAAATTCGCAAA................................... 18 1 18 0.06 1 0 0 0 0 1 0 0
............................................................................................................................................................................................................................AAGATTAGATAGTTGGTGA.................................................................................................. 19 3 20 0.05 1 0 1 0 0 0 0 0
............................GAAGGAAACTTAGAAAAAGC................................................................................................................................................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 1

Anti-sense strand reads

TTTCTGTCACGTTACACGCCCTCTTTAGCTTCCTTCGAATCGTTGTCGTCCACACATGAGGAAATTTTCTATATAAATATTTATCTATGTAAATAATGATATTTTGTTTACCTATTTTTGCATTAACAAAACTGTTATAAGGCAAATAAAGAATTTATAAAGCATACAAAGAATTTCAACTATTATAGAACTTTTAACTTGTTTAAAAATAAAATAAAAATTCTAATCTATAAACAATTACTGATAGGGTTGATTGCAATAGAAAATGAGACGAATAATAGAACGTCCAAGTTTCAGCGTTTGTGTAGTTTATGATCGTATTAAGACATGATGCCTA
**************************************************.............(((((((((((((((.((((((((.....((((....(((((((((((........)))..))))))))..))))....))))))))..))))))(((((.(((((((........)).)))))..)))))....(((((((.(((((((((....))))).)))).))))))).....................)))))))))..((((..........))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
................................................................................................................................................................................................................................................................CCAAAGAAAATGAGGCGAATAA........................................................... 22 3 4 1.25 5 3 2 0 0 0 0
................................................................................................................................................................................................................................................................CCAAAGAAAATGAGGCGAATA............................................................ 21 3 7 0.57 4 2 2 0 0 0 0
.....................................................................................................................................................................................................................................................................GAAAATGAGGCGAATAA........................................................... 17 1 3 0.33 1 0 0 1 0 0 0
....................................................................................................................................................................................................................................................................AGAAAAGGAGGCGAATCAT.......................................................... 19 3 20 0.15 3 0 0 0 3 0 0
................................................................TTTTCTAAATAAATATATATCAAT......................................................................................................................................................................................................................................................... 24 3 10 0.10 1 0 0 1 0 0 0
......................................................................................................................................................................................................................................AAAACAATTACTGCTAGCGT....................................................................................... 20 3 13 0.08 1 0 0 0 0 1 0
.................................................................................................................................................................................................................................................................CAAAGAAAATGAGGCGAATAA........................................................... 21 3 13 0.08 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................................GAAAATGAGGCGAAT............................................................. 15 1 14 0.07 1 0 0 0 1 0 0
................................................................................................................................................................................................................................................................CCAAAGAAAATGAGGCGAAT............................................................. 20 3 16 0.06 1 1 0 0 0 0 0
....................................................................................................................................................................................................................................................TAGGGTCGATTGCAAG............................................................................. 16 2 20 0.05 1 0 0 0 0 0 1
...................................................................................................................................................................................................................................................................AAGAAAATGAGGCGAAT............................................................. 17 2 20 0.05 1 0 0 1 0 0 0
.....................................................................................................................................................................................................................................................................GAAAAGGAGGCGAATAAT.......................................................... 18 2 20 0.05 1 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:12276425-12276761 + dsi_28505 AAA------GACAGTGCAATGTGCGG------GA---------------GAAATCGAAGGAA-GCTTAGCAAC------AGCAGGTGTGTACTCCTTTAAAAGATATATT----TATAAATA-----------------------------------------------------GATAC------------ATT------------------------TATTACTATAAAACAAA---------------------T--------------------G----------------------------------------------------------GA-----------------T---------------AAA-AACGTAATTGTT-TTG----------------ACAATA--------------------------------------------------------------------------TTCCG--------T-------------T-------------------------------T-ATTTCTTAAATA---T--TT---------CGTATGTTT------C-TTAAAGTTGATAA-TATCTTGAAAATTGA---ACAAATTTTTATTTT------------------------------------------------------------------------------------------------------ATTTTTAAGATTAGATATTTGTTAATGACT---------------------------------------------------------------------------------------ATCCCAACTAACG--TTATC--TTTTACTCTGCTTATT-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTACTACGGAT
droSec2 scaffold_16:811739-812075 + AAA------GACAGTGCAATGTGCGG------GA---------------GAAATCGAAGGAA-GCTTAGCAAC------AGCAGGTGTGTACTCCTCTAAAAGATATATT----TATAAATA-----------------------------------------------------TAAAC------------ATT------------------------TATTACTATAAAACCAA---------------------T--------------------G----------------------------------------------------------GA-----------------T---------------AAA-AACGTAATTGTT-TGG----------------AAAATA--------------------------------------------------------------------------TTCCG--------T-------------T-------------------------------T-ATTTCTTAAATA---T--TT---------CGTATGCTT------T-TCCAAGTTGATAA-TGTCCTGAAAATTTA---ACAAATTTTTATTTC------------------------------------------------------------------------------------------------------ATTTTTAAGATTAGATATTTGTTAATGGCT---------------------------------------------------------------------------------------ATCTCAACTAACG--TTATC--TTTTACTCTGCTTATT-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTACTACGGAT
dm3 chr2L:12627134-12627473 + AAA------GACAGTGCAATGTGCGG------GA---------------TAAATCGAAGGAA-GCTTAGCAAC------AGCAGGTGTGTACTCCTCTAAAAGATATATT----TATAAATA-----------------------------------------------------GATAC------------ATT------------------------TATTGCTTTAAATCCAA---------------------T--------------------G----------------------------------------------------------GT-----------------T---------------AAATAACGTAATTGTTTTTG----------------ACAATA--------------------------------------------------------------------------TTCCG--------T-------------T-------------------------------TCATTTCTTAAATA---T--TT---------CATATATTT------T-TCAAAGTTGATAA-TGGCTTGAAAATTTA---ACTAATTTTTATTTT------------------------------------------------------------------------------------------------------ATTTTCAAGATTAGATATTTCTTAATGATT---------------------------------------------------------------------------------------ATCTCAACTAACG--TTATC--TATTTCTTTGCTTATT-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTACTACGGAT
droEre2 scaffold_4929:12796877-12797255 - AAC------GACAGTGCAATGTGTGG------GA---------------AAAATCGAAGGAA-GCTTAGCAAC------AGCAGGTGTGTACTCCTCTAAAACATATAAC----TACAACTA-----------------------------------------------------GATAC------------ATT------------------------TA---------AACCAGTATCTGTAGATACAATAAATAG--------------------G-------------ATTTATA-TTCGGT-TCACTGT---------------------------AAAT-TAA-TTTCCGT---------------AA-TAACGTAATTGTT-TTG----------------ATATCA--------------------------------------------------------------------------TTCCG--------C-------------T-------------------------------TAATTATCTAAATA---T--TT-ATGAATGCCGTAT--T-------TTGC-AAATTGATAA-CGACTTGAAAACGTA---ACAAATTATTATTAT------------------------------------------------------------------------------------------------------ATTTTTAGTAAAAGATAC------ATGATT---------------------------------------------------------------------------------------ATCTTAACTAACG--TTATC--GCCTTCTCTGCTCTT--TTTTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTACTACGGAT
droYak3 2L:9063328-9063706 + AAA------GACAGTGCAATGTGCGG------GA---------------GAAAGCGAAGGAA-GCTTAGCAAC------AGCAGGTGTGTACTCCTCTAAAC-AAATAGT----TATAAAAA-----------------------------------------------------AAAAG------------ATT--T---------------------TATTAT--------------------ATGAAATATTCAT--------------------G-------------TTTAATA-GTCGGTTTTACTTT---------------------------GAAT-GAA-TTTTAGT---------------TA-TCACGTAATTGTG-TTT----------------AAAATA--------------------------------------------------------------------------TTCCG--------C-------------T-------------------------------TCAGTGCATTAATA---TATTT---------TCTATT-T-------TTGTTAACTGGTTTA-TGTTTAAAAAAAGTA---ACCAATTCTTTTTTT------------------------------------------------------------------------------------------------------ATTTTTAAGATTATATATGTGTTAATGAAT---------------------------------------------------------------------------------------ATCTCAACTAACG--TTATC--TCCCTCTCTGCTCATT-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAACACTAGCATAATTCTGAATTCTGTACTACGGAT
droEug1 scf7180000409122:1013928-1014169 + AAA------GACAGTGCAATGAGAAA-GAAGGAA---------------AAAATCTAAGGAA-GCTTAGCAAC------AGCAGGTGTGTAAACTT---------------TCTT---TGAT-----------------------------------------------------GATAC------------TTT------------------------TCAAGTATAGATGTTCC---------------------TTCT---------------------------------------------------------------------------GAACT-AAAG-TC-TTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCACTTAATTTATTTTT------ATAGTTTTTAT---------------------ATTATTTACTAACC--TTATC--TCTCCGTTTTCTTATC-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTACTATGGAT
droBia1 scf7180000302422:323902-324209 - GAA------GGCAGTGCAATGTGCGG------AA---------------GAAATCTAGGGAA-GCTTAGCAAC------AGCAGGTGTGTATTTCTT-----------------------------------------------------------------------ATTGAACAATACTTTTAAATATAA---AGTAA-T--GTAAG----CCATTTCATT--CTTAAATTTAA---------------------TT--------------------------------------------------A---------------------------AACTAAAT-TAA-ATTT-------------------------------------G----------------GTTAAATTCTACTTTTAC-------------------------------------------------------------------------------------------------------------------------------------TGATTT-------------------------------C---------------------------TAACTTTA----------------AAGATG-----C-----------------------------------------------------------------------------------------------TTTACATTTTTTACTGGTT----------------------------ATTTCACAAT--------TATC--------------------------------AATACAACTTTACTAATA--CCATC--TCTTAATTTGCTTGTT-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTA-TACAGAT
droTak1 scf7180000415871:688001-688304 + AAA------GACAGTGCAATGTGCCG------GA---------------GAAATCTAAGGAA-GCTTAGCAAC------AGCAGGTGTGTAAATTG---------------TCTA---TGAT-----------------------------------------------------AAT----------------------------------------------------------------------------------------------------------A-ATATTAATTAAAA-TTCATT-TTAAATT---------------------------AAAT-AAA-ATTTACT---------------TT-TGACATAATTATT------------------------------------------------------------------------------------------------------------------------------TTTATTAAAAAAATTGTCCATTAAATAT-----------TTTT-------------------------------------------------------------------AAAATATA----------------AAAATA-----C------------------------------------------------------------------------------------------------------------------------------CCTTATTATTATAAACATTTCACAAC--------TATT--------------------------------ACTTTAACTTAACTAACC--TTATC--TCTTTCTTTGCTTATT-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTACTTCGGAT
droEle1 scf7180000491028:2472567-2472997 - AAA------GACAGTGCAATGTGCCG------GA---------------GAAATCAAAGGAA-GCTTAGCAACACTATGAGCAGGTGTGTATTTCTCTTTAA-AAATACT----TAAAACTT-----------------------------------------------------TATAT----------T----AGGAACTATTT--------------------TTTGTTC------------------------ATATATATTTACAAGCAGTTAGGATAGCTAATT--GGAAAGGTAGGCGT-AAAGGGTTTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTA-------------CAACGAAGCCCAATTT-AATTCTTAT-G-A-----------------------CT--------------------------------------------------ATATTAATTTCAAGATG--TGGCTTAACTGTTAAAGCTAATATTTCATAATTATTTTAGTTGCAATACAATTAAATAGCTGGG------------GTTTTCTTTGTT----------------------------------------AGTCTTATTAATCTA-TTATTTTATAAA--------ATATAAGTA---------A---------------------ACCTTTTACTAACG--TTATC--TTGTCCTTTGCTTTCT-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTACTACGGAC
droRho1 scf7180000780043:528589-528807 + TTTAT---------------------------------------------------------------------------------------TTGTCAAA-------------------------------------------------------------------------------------------------------------------------------CCAAGCATT---------------------TCAT---------------------------------------------------------------------------GTACC-TAAA-AGCATTT---T------------------------------------------------------------------------------------------------TTTACAAATTA------ATGTGAA-------------------------ATAGTTTTATTTTTAATTTAGAGATTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------------------AGCCTGATTAAGAGAGTTATTTTAAAAA--------TGTT--CTA-------------------------------TACCTTTACTAACG--TTATC--TCTTCCTTTGCTTATT-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTACTACGGAT
droFic1 scf7180000449159:363-768 + AAA------GACAGTGCAATGTGCCG------GA---------------GAAATCAAAGGAA-GCTTAGCAACACTATGAGCAGGTGTGTATTTCTCTAT--------------TATAAAAA-----------------------------------------------------A-------------------AGTAACTATATGAGATTT-----TTACATTATCTA-CCATC---------------------ACTC---------------------AAA-GAATAATTTTATA-ATAATT-AACAATTAA--TAATAATTTTAATAATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCAACAAATACC--TTT-ATTTCTTGC-G-A-----------------------CT------T-TCAAACTCGCAAA-TATTGTCAAGATTT-ATAATAAA----------------AAATTACT--GC--------------------------------------------------------CCAAAATATAATATACATTATTATTTTT----------------------------------------AAATTTA--TAGATT------------------------T--CTA---------TTAACATAACAAATTTTTACCACAAATTTACTAACG--TTATC--TCTACCTTTGCTTATT-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTACTACGGAT
droKik1 scf7180000302472:1016324-1016638 + AAA------GACAGTGCAATGTGCGGAG----AA---------------GGAATCAGAGGAATGCTAAGCAACACTATGTGCAGGTAAATATAA------------TTTT----A---AATATTTTACGGG-----------------------------------------------------------------------------------------ATTATTTTTGCACTTT---------------------TTAA---------------------------------------------------------------------------ATAGT-TA----------------------------------------------------------------------------------------------------CAAGTTCTTTTACCT------------TTTTGGG-------------------------ATATATTTT-ATT-------------------------------------------G-ATTT--TCCTTTAG---------TTTTATTTAT-------TTGAATG-AGATC------------------TTAATAT--T------------------------------------------------------------------------------------------------------ATATTTAAGTAAATATAT------ATATTTT-----------------------------------------------TT--------------------------------ATAGAAATCTTACTTATC--CCTT---CATTCCTTTGCTTATT-TCCTTGCAGGTTCAA-AGACGCAA-ACACATCAAATACTAGCTTAATTC-------TGTCCTAAAGTT
droAna3 scaffold_12916:12776867-12777121 - AAA------CACAGTGCAATGTGCGA------GATACAGGCAGTGGTTAAAAATCAAAGGAA-GCTTAGCAACACTATTAGCAGGTGTGTAAAA--------ATTATGTT----A---TTT---TTAAGGGCTTATTAAACATTTAATATTGCTAATATTGCTTTCTTATTGAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT-TG------------------------------------------A-T-GCCT--TT---------TGTATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCTTATTAACCTCAAATC--CCTTCTTTTGCTTATG-TCCTTTCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGAATAATTC-------AAAACTA-----
droBip1 scf7180000396580:750215-750370 + TTTATTTTTTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCGTAATTTGT-TTG----------------GCAATA--------------------------------------------------------------------------TCCTAATAAATGGCTAACCTCTTT-AG--------------------------------------------TGATTT----------------------------------------------------------------------TTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTTTTTAACC---CAAA--TCTTTTTTTGCTTGTG-TCCTTTTAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGAATAATTC-------AAAACCA-----
dp5 4_group3:3365261-3365347 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACG--ATGGA--CTTTCCTCTGCTCTCTGTTCTTCCAGGTTCAA-AGTCGCAA-ACACATCAAATATTAGCATAATTC-------TTGACTACGATT
droPer2 scaffold_1:4842329-4842557 + AAA------CAGAGTGCAATGTGCGC------AG---------------GACACACGAGGAG-GCA-----ACACGAAGAGCAGGTAAA--------------ATATTTGATCTT---TGAT-----------------------------------------------------------------------------------------CT-----TTCCATTCTCCATGCATT---------------------TCCC---------------------------------------------------------------------------ATATT-TAAA-CC-ACCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCTCCTTTTTCTTTGGC--CAA-------------------------------AACCTCCTCTAACG--ATGGA--CTTTCCTCTGCTCTCTGTTCTTCCAGGTTCAA-AGTCGCAA-ACACATCAAATATTAGCCTAATTC-------TTGACTACGATT
droWil2 scf2_1100000004521:10467048-10467130 + A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATG--AAATA--CCTTTATTTGCTTCTC-TCATTCCAGGTTCAA-AGACGCAA-ACACATCAAATATTAGCTTAATTA-----------ACACACAC
droVir3 scaffold_13246:1915894-1916151 + TAT-------ACAAT-CAATTAATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-AAATAATTTAAAA-ATAATT-TTATATTAT--TAAAA---TATATATTTTGTATT-CAAA-TA-ATTTTTTT------------------------------------------------------------------------------------------------TTTGT------------ATTTGAA-------------------------ATAGTTTTC-ATT-------------------------------T-AATTTTTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTTTTTTT----------------------------------------AAATTTACCTAAATA-CTTCTTCACATA--------TTTTACATA---------T--------------------TTTTTCTAACTAAAT--TTTCC--CTTATCTTTGCTCTT---CTTTGCAGGTTCAA-AGTCGCAAAACACATCAAATATTAGCATAAATT-------TTAACTATGATT
droMoj3 scaffold_6500:4035477-4035752 - TAT-----------------------------------------------------------------------------------------TTATCTAAAAATTATTTT----T---TATT-----------------------------------------------------TATTC------------TTT------------------------TATTGCTTTAAAATTAT---------------------TTTA---------------------------------------------------------------------------AAACT-TAAA-AA-ATTTTTTT---------------T----------------------------------------TTCTATTTTTAC---------------------------------------------------------------------------------------ATTTAA-------------CAAATAATGCCACATT-AA---------------------------------TTT----------------------TGTAAAG-----------ACAAATTATTATTAT------------------------------------------------------------------------------------------------------TAATTTAATTTTTTATTC------ATAATTTCGTGTATACAGTGTC-------------------------------ATT--------------------------------AAAAAATCTTTACTAAAT--ATTT---CCTTCTTCTGCTCTT--TTTTTGCAGGATCAA-TGTCGCAAAACACATCAAATATTAGCATAATTC-------TTCACTATGATT
droGri2 scaffold_15252:15347988-15348445 - ACAACATA-TGCCGTGCAATGTGCGC------AA---------------AGCA-----GCAG-GCTTAACTA-ACTAAAAGCAGGTGTGTAAAATC--AAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATAGATAAATAAGTAAAAACACAAAT-ATATGGTAT--TATTT---TAAAAAAAATAAACA-CAAA-TA-ATATTTTATGAAATGAACTAATT-G-AAAGCAATAGTT-TAAAATCAATAATTCAACTATTTGATTCCACTTTTAGTTTTATCTAAAAGAATTATATGTTTTTTAATCT------AAAGTACTTTGAGTACAGAAATTTCTAGATAATTCTCAAAATATTTT-AG------------------------------------------C-G-ACTT--TTTATCTGTTACTTAT--A-------TTTC-TAATTAATAAACTATTCCAAAACTGA---A-------------------------------------------------------------------------------------AGCTGAA------------ATTC------------------TCAGATA----------------------------------------------------------------------------------------------------TATTTTACTAACT--TTCTTAGTGTTTGTTTACTCTTTTTCGTTTCAGGTTCAAAAGTCGCAAAACACATCAAATATTAGCATAATTC-------TTCACTATGATT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAA------GACAGTGCAATGTGCGG------GA---------------GAAATCGAAGGAA-GCTTAGCAAC------AGCAGGTGTGTACTCCTTTAAAAGATATATT----TATAAATA-----------------------------------------------------GATAC------------ATT------------------------TATTACTATAAAACAAA---------------------T--------------------G----------------------------------------------------------GA-----------------T---------------AAA-AACGTAATTGTT-TTG----------------ACAATA--------------------------------------------------------------------------TTCCG--------T-------------T-------------------------------T-ATTTCTTAAATA---T--TT---------CGTATGTTT------C-TTAAAGTTGATAA-TATCTTGAAAATTGA---ACAAATTTTTATTTT------------------------------------------------------------------------------------------------------ATTTTTAAGATTAGATATTTGTTAATGACT---------------------------------------------------------------------------------------ATCCCAACTAACG--TTATC--TTTTACTCTGCTTATT-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTACTACGGATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA-AGTCGCAA-ACACATCAAATACTAGC..........................2811.00100010000000000000
....................................................ATCGAAGGAA-GCTTAGCAAC------AGCAGGTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100010000000000000
droSec2
AAA------GACAGTGCAATGTGCGG------GA---------------GAAATCGAAGGAA-GCTTAGCAAC------AGCAGGTGTGTACTCCTCTAAAAGATATATT----TATAAATA-----------------------------------------------------TAAAC------------ATT------------------------TATTACTATAAAACCAA---------------------T--------------------G----------------------------------------------------------GA-----------------T---------------AAA-AACGTAATTGTT-TGG----------------AAAATA--------------------------------------------------------------------------TTCCG--------T-------------T-------------------------------T-ATTTCTTAAATA---T--TT---------CGTATGCTT------T-TCCAAGTTGATAA-TGTCCTGAAAATTTA---ACAAATTTTTATTTC------------------------------------------------------------------------------------------------------ATTTTTAAGATTAGATATTTGTTAATGGCT---------------------------------------------------------------------------------------ATCTCAACTAACG--TTATC--TTTTACTCTGCTTATT-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTACTACGGATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................CGAAGGAA-GCTTAGCAAC------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...........................................................GAA-GCTTAGCAAC------AGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................AATTGTT-TGG----------------AAAATA--------------------------------------------------------------------------TTCCG--------T-------------T-------------------------------T-...................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
dm3
AAA------GACAGTGCAATGTGCGG------GA---------------TAAATCGAAGGAA-GCTTAGCAAC------AGCAGGTGTGTACTCCTCTAAAAGATATATT----TATAAATA-----------------------------------------------------GATAC------------ATT------------------------TATTGCTTTAAATCCAA---------------------T--------------------G----------------------------------------------------------GT-----------------T---------------AAATAACGTAATTGTTTTTG----------------ACAATA--------------------------------------------------------------------------TTCCG--------T-------------T-------------------------------TCATTTCTTAAATA---T--TT---------CATATATTT------T-TCAAAGTTGATAA-TGGCTTGAAAATTTA---ACTAATTTTTATTTT------------------------------------------------------------------------------------------------------ATTTTCAAGATTAGATATTTCTTAATGATT---------------------------------------------------------------------------------------ATCTCAACTAACG--TTATC--TATTTCTTTGCTTATT-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTACTACGGATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................TCGAAGGAA-GCTTAGCAAC------A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000
..A------GACAGTGCAATGTGCGG------GA---------------TAAATCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
................................GA---------------TAAATCGAAGGAA-GCTTAGCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAA------GACAGTGCAATGTGCGG------GA---------------TAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATGTGCGG------GA---------------TAAATCGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................TCGAAGGAA-GCTTAGCAAC------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTGCTTATT-ATCTT...............................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................GTGCGG------GA---------------TAAATCGAAGGAA-G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--TATTTCTTTGCTTATT-ATCTTG..............................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACG--TTATC--TATTTCTTTGCTT........................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................ATCGAAGGAA-GCTTAGCAAC------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AA------GACAGTGCAATGTGCGG------GA---------------TAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGTTCAA-AGTCGCAA-ACA........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AGTGCAATGTGCGG------GA---------------TAAATCGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................A---------------TAAATCGAAGGAA-GCTTAGCAAC------AGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AAC------GACAGTGCAATGTGTGG------GA---------------AAAATCGAAGGAA-GCTTAGCAAC------AGCAGGTGTGTACTCCTCTAAAACATATAAC----TACAACTA-----------------------------------------------------GATAC------------ATT------------------------TA---------AACCAGTATCTGTAGATACAATAAATAG--------------------G-------------ATTTATA-TTCGGT-TCACTGT---------------------------AAAT-TAA-TTTCCGT---------------AA-TAACGTAATTGTT-TTG----------------ATATCA--------------------------------------------------------------------------TTCCG--------C-------------T-------------------------------TAATTATCTAAATA---T--TT-ATGAATGCCGTAT--T-------TTGC-AAATTGATAA-CGACTTGAAAACGTA---ACAAATTATTATTAT------------------------------------------------------------------------------------------------------ATTTTTAGTAAAAGATAC------ATGATT---------------------------------------------------------------------------------------ATCTTAACTAACG--TTATC--GCCTTCTCTGCTCTT--TTTTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTACTACGGATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA---T--TT-ATGAATGCCGTAT--T-------.......................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
.................AATGTGTGG------GA---------------AAAATCGAAGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAA-CGACTTGAAAACGT.........................................................................................................................................................................................................................................................................................................................................................1911.0010000100
......................................................CGAAGGAA-GCTTAGCAAC------AGCAGGTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-CGACTTGAAAACGTA---ACAAATTATT...........................................................................................................................................................................................................................................................................................................................................2711.0010100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATAA-CGACTTGAAAACGT.........................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.................................................AAAATCGAAGGAA-GCTTAGCAAC------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGAAAACGTA---ACAAATTATTATT........................................................................................................................................................................................................................................................................................................................................2711.0010100000
..........ACAGTGCAATGTGTGG------GA---------------AAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
........................GG------GA---------------AAAATCGAAGGAA-GCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.AC------GACAGTGCAATGTGTGG------G.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
droYak3
AAA------GACAGTGCAATGTGCGG------GA---------------GAAAGCGAAGGAA-GCTTAGCAAC------AGCAGGTGTGTACTCCTCTAAAC-AAATAGT----TATAAAAA-----------------------------------------------------AAAAG------------ATT--T---------------------TATTAT--------------------ATGAAATATTCAT--------------------G-------------TTTAATA-GTCGGTTTTACTTT---------------------------GAAT-GAA-TTTTAGT---------------TA-TCACGTAATTGTG-TTT----------------AAAATA--------------------------------------------------------------------------TTCCG--------C-------------T-------------------------------TCAGTGCATTAATA---TATTT---------TCTATT-T-------TTGTTAACTGGTTTA-TGTTTAAAAAAAGTA---ACCAATTCTTTTTTT------------------------------------------------------------------------------------------------------ATTTTTAAGATTATATATGTGTTAATGAAT---------------------------------------------------------------------------------------ATCTCAACTAACG--TTATC--TCCCTCTCTGCTCATT-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAACACTAGCATAATTCTGAATTCTGTACTACGGATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................AATGTGCGG------GA---------------GAAAGCGAAGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.............................................................A-GCTTAGCAAC------AGCAGGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
AAA------GACAGTGCAATGTGCGG------GA---------------GAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.................AATGTGCGG------GA---------------GAAAGCGAAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAA-ACACATCAAACACTAGC..........................2211.00101000000000
.AA------GACAGTGCAATGTGCGG------GA---------------GAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
...................TGTGCGG------GA---------------GAAAGCGAAGGAA-GCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.AA------GACAGTGCAATGTGCGG------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAACTAACG--TTATC--TCCCTCTCT............................................................................2511.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTCTCTGCTCATT-ATCTTGC.............................................................2311.00101000000000
.AA------GACAGTGCAATGTGCGG------GA---------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATA--------------------------------------------------------------------------TTCCG--------C-------------T-------------------------------TCAGTGCATTAAT........................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-AGTCGCAA-ACACATCAAACACTAGC..........................2711.00101000000000
...............GCAATGTGCGG------GA---------------GAAAGCGAAGGAA-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000
...............GCAATGTGCGG------GA---------------GAAAGCGAAGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.........GACAGTGCAATGTGCGG------GA---------------GAAAGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
droEug1
AAA------GACAGTGCAATGAGAAA-GAAGGAA---------------AAAATCTAAGGAA-GCTTAGCAAC------AGCAGGTGTGTAAACTT---------------TCTT---TGAT-----------------------------------------------------GATAC------------TTT------------------------TCAAGTATAGATGTTCC---------------------TTCT---------------------------------------------------------------------------GAACT-AAAG-TC-TTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCACTTAATTTATTTTT------ATAGTTTTTAT---------------------ATTATTTACTAACC--TTATC--TCTCCGTTTTCTTATC-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTACTATGGATSizeHit CountTotal NormTotal
No Reads
droBia1
GAA------GGCAGTGCAATGTGCGG------AA---------------GAAATCTAGGGAA-GCTTAGCAAC------AGCAGGTGTGTATTTCTT-----------------------------------------------------------------------ATTGAACAATACTTTTAAATATAA---AGTAA-T--GTAAG----CCATTTCATT--CTTAAATTTAA---------------------TT--------------------------------------------------A---------------------------AACTAAAT-TAA-ATTT-------------------------------------G----------------GTTAAATTCTACTTTTAC-------------------------------------------------------------------------------------------------------------------------------------TGATTT-------------------------------C---------------------------TAACTTTA----------------AAGATG-----C-----------------------------------------------------------------------------------------------TTTACATTTTTTACTGGTT----------------------------ATTTCACAAT--------TATC--------------------------------AATACAACTTTACTAATA--CCATC--TCTTAATTTGCTTGTT-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTA-TACAGATSizeHit CountTotal NormTotal
No Reads
droTak1
AAA------GACAGTGCAATGTGCCG------GA---------------GAAATCTAAGGAA-GCTTAGCAAC------AGCAGGTGTGTAAATTG---------------TCTA---TGAT-----------------------------------------------------AAT----------------------------------------------------------------------------------------------------------A-ATATTAATTAAAA-TTCATT-TTAAATT---------------------------AAAT-AAA-ATTTACT---------------TT-TGACATAATTATT------------------------------------------------------------------------------------------------------------------------------TTTATTAAAAAAATTGTCCATTAAATAT-----------TTTT-------------------------------------------------------------------AAAATATA----------------AAAATA-----C------------------------------------------------------------------------------------------------------------------------------CCTTATTATTATAAACATTTCACAAC--------TATT--------------------------------ACTTTAACTTAACTAACC--TTATC--TCTTTCTTTGCTTATT-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTACTTCGGATSizeHit CountTotal NormTotal
No Reads
droEle1
AAA------GACAGTGCAATGTGCCG------GA---------------GAAATCAAAGGAA-GCTTAGCAACACTATGAGCAGGTGTGTATTTCTCTTTAA-AAATACT----TAAAACTT-----------------------------------------------------TATAT----------T----AGGAACTATTT--------------------TTTGTTC------------------------ATATATATTTACAAGCAGTTAGGATAGCTAATT--GGAAAGGTAGGCGT-AAAGGGTTTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTA-------------CAACGAAGCCCAATTT-AATTCTTAT-G-A-----------------------CT--------------------------------------------------ATATTAATTTCAAGATG--TGGCTTAACTGTTAAAGCTAATATTTCATAATTATTTTAGTTGCAATACAATTAAATAGCTGGG------------GTTTTCTTTGTT----------------------------------------AGTCTTATTAATCTA-TTATTTTATAAA--------ATATAAGTA---------A---------------------ACCTTTTACTAACG--TTATC--TTGTCCTTTGCTTTCT-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTACTACGGACSizeHit CountTotal NormTotal
No Reads
droRho1
TTTAT---------------------------------------------------------------------------------------TTGTCAAA-------------------------------------------------------------------------------------------------------------------------------CCAAGCATT---------------------TCAT---------------------------------------------------------------------------GTACC-TAAA-AGCATTT---T------------------------------------------------------------------------------------------------TTTACAAATTA------ATGTGAA-------------------------ATAGTTTTATTTTTAATTTAGAGATTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------------------AGCCTGATTAAGAGAGTTATTTTAAAAA--------TGTT--CTA-------------------------------TACCTTTACTAACG--TTATC--TCTTCCTTTGCTTATT-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTACTACGGATSizeHit CountTotal NormTotal
No Reads
droFic1
AAA------GACAGTGCAATGTGCCG------GA---------------GAAATCAAAGGAA-GCTTAGCAACACTATGAGCAGGTGTGTATTTCTCTAT--------------TATAAAAA-----------------------------------------------------A-------------------AGTAACTATATGAGATTT-----TTACATTATCTA-CCATC---------------------ACTC---------------------AAA-GAATAATTTTATA-ATAATT-AACAATTAA--TAATAATTTTAATAATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCAACAAATACC--TTT-ATTTCTTGC-G-A-----------------------CT------T-TCAAACTCGCAAA-TATTGTCAAGATTT-ATAATAAA----------------AAATTACT--GC--------------------------------------------------------CCAAAATATAATATACATTATTATTTTT----------------------------------------AAATTTA--TAGATT------------------------T--CTA---------TTAACATAACAAATTTTTACCACAAATTTACTAACG--TTATC--TCTACCTTTGCTTATT-ATCTTGCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGCATAATTC-------TGTACTACGGATSizeHit CountTotal NormTotal
No Reads
droKik1
AAA------GACAGTGCAATGTGCGGAG----AA---------------GGAATCAGAGGAATGCTAAGCAACACTATGTGCAGGTAAATATAA------------TTTT----A---AATATTTTACGGG-----------------------------------------------------------------------------------------ATTATTTTTGCACTTT---------------------TTAA---------------------------------------------------------------------------ATAGT-TA----------------------------------------------------------------------------------------------------CAAGTTCTTTTACCT------------TTTTGGG-------------------------ATATATTTT-ATT-------------------------------------------G-ATTT--TCCTTTAG---------TTTTATTTAT-------TTGAATG-AGATC------------------TTAATAT--T------------------------------------------------------------------------------------------------------ATATTTAAGTAAATATAT------ATATTTT-----------------------------------------------TT--------------------------------ATAGAAATCTTACTTATC--CCTT---CATTCCTTTGCTTATT-TCCTTGCAGGTTCAA-AGACGCAA-ACACATCAAATACTAGCTTAATTC-------TGTCCTAAAGTTSizeHit CountTotal NormTotal
No Reads
droAna3
AAA------CACAGTGCAATGTGCGA------GATACAGGCAGTGGTTAAAAATCAAAGGAA-GCTTAGCAACACTATTAGCAGGTGTGTAAAA--------ATTATGTT----A---TTT---TTAAGGGCTTATTAAACATTTAATATTGCTAATATTGCTTTCTTATTGAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT-TG------------------------------------------A-T-GCCT--TT---------TGTATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCTTATTAACCTCAAATC--CCTTCTTTTGCTTATG-TCCTTTCAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGAATAATTC-------AAAACTA-----SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................ATCAAAGGAA-GCTTAGCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
................CAATGTGCGA------GATACAGGCAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
..................ATGTGCGA------GATACAGGCAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
...................................................AATCAAAGGAA-GCTTAGCAACACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
...............GCAATGTGCGA------GATACAGGCAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...................................................AATCAAAGGAA-GCTTAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
droBip1
TTTATTTTTTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCGTAATTTGT-TTG----------------GCAATA--------------------------------------------------------------------------TCCTAATAAATGGCTAACCTCTTT-AG--------------------------------------------TGATTT----------------------------------------------------------------------TTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTTTTTAACC---CAAA--TCTTTTTTTGCTTGTG-TCCTTTTAGGTTCAA-AGTCGCAA-ACACATCAAATACTAGAATAATTC-------AAAACCA-----SizeHit CountTotal NormTotal
No Reads
dp5
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACG--ATGGA--CTTTCCTCTGCTCTCTGTTCTTCCAGGTTCAA-AGTCGCAA-ACACATCAAATATTAGCATAATTC-------TTGACTACGATTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-AGTCGCAA-ACACATCAA..................................1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCATAATTC-------TTGACTACG...2111.0010100000000
droPer2
AAA------CAGAGTGCAATGTGCGC------AG---------------GACACACGAGGAG-GCA-----ACACGAAGAGCAGGTAAA--------------ATATTTGATCTT---TGAT-----------------------------------------------------------------------------------------CT-----TTCCATTCTCCATGCATT---------------------TCCC---------------------------------------------------------------------------ATATT-TAAA-CC-ACCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCTCCTTTTTCTTTGGC--CAA-------------------------------AACCTCCTCTAACG--ATGGA--CTTTCCTCTGCTCTCTGTTCTTCCAGGTTCAA-AGTCGCAA-ACACATCAAATATTAGCCTAATTC-------TTGACTACGATTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCTCTGCTCTCTGTTCTTCCAG...........................................................2512.002200000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCTCTGCTCTCTGTTCTTCCAC...........................................................2511.001100000
droWil2
A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATG--AAATA--CCTTTATTTGCTTCTC-TCATTCCAGGTTCAA-AGACGCAA-ACACATCAAATATTAGCTTAATTA-----------ACACACACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TAT-------ACAAT-CAATTAATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-AAATAATTTAAAA-ATAATT-TTATATTAT--TAAAA---TATATATTTTGTATT-CAAA-TA-ATTTTTTT------------------------------------------------------------------------------------------------TTTGT------------ATTTGAA-------------------------ATAGTTTTC-ATT-------------------------------T-AATTTTTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTTTTTTT----------------------------------------AAATTTACCTAAATA-CTTCTTCACATA--------TTTTACATA---------T--------------------TTTTTCTAACTAAAT--TTTCC--CTTATCTTTGCTCTT---CTTTGCAGGTTCAA-AGTCGCAAAACACATCAAATATTAGCATAAATT-------TTAACTATGATTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA-AGTCGCAAAACACATCAAATATTAGC..........................2911.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATTAGCATAAATT-------TTAACTATGAT.2711.001000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAA-AGTCGCAAAACACATCAAAT................................2611.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACATCAAATATTAGCAT........................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGTTCAA-AGTCGCAAA...........................................1911.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAAACACATCAAATATTAGC..........................2311.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA-AGTCGCAAAACACATCA...................................2011.001000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTTTGCTCTT---CTTTGCAG...........................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA-AGTCGCAAAACACATCAAAT................................2311.001000000000000000100000000000000000000000000000000000000000000000
droMoj3
TAT-----------------------------------------------------------------------------------------TTATCTAAAAATTATTTT----T---TATT-----------------------------------------------------TATTC------------TTT------------------------TATTGCTTTAAAATTAT---------------------TTTA---------------------------------------------------------------------------AAACT-TAAA-AA-ATTTTTTT---------------T----------------------------------------TTCTATTTTTAC---------------------------------------------------------------------------------------ATTTAA-------------CAAATAATGCCACATT-AA---------------------------------TTT----------------------TGTAAAG-----------ACAAATTATTATTAT------------------------------------------------------------------------------------------------------TAATTTAATTTTTTATTC------ATAATTTCGTGTATACAGTGTC-------------------------------ATT--------------------------------AAAAAATCTTTACTAAAT--ATTT---CCTTCTTCTGCTCTT--TTTTTGCAGGATCAA-TGTCGCAAAACACATCAAATATTAGCATAATTC-------TTCACTATGATTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTAGCATAATTC-------TTCACT......2111.001100000
droGri2
ACAACATA-TGCCGTGCAATGTGCGC------AA---------------AGCA-----GCAG-GCTTAACTA-ACTAAAAGCAGGTGTGTAAAATC--AAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATAGATAAATAAGTAAAAACACAAAT-ATATGGTAT--TATTT---TAAAAAAAATAAACA-CAAA-TA-ATATTTTATGAAATGAACTAATT-G-AAAGCAATAGTT-TAAAATCAATAATTCAACTATTTGATTCCACTTTTAGTTTTATCTAAAAGAATTATATGTTTTTTAATCT------AAAGTACTTTGAGTACAGAAATTTCTAGATAATTCTCAAAATATTTT-AG------------------------------------------C-G-ACTT--TTTATCTGTTACTTAT--A-------TTTC-TAATTAATAAACTATTCCAAAACTGA---A-------------------------------------------------------------------------------------AGCTGAA------------ATTC------------------TCAGATA----------------------------------------------------------------------------------------------------TATTTTACTAACT--TTCTTAGTGTTTGTTTACTCTTTTTCGTTTCAGGTTCAAAAGTCGCAAAACACATCAAATATTAGCATAATTC-------TTCACTATGATTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACATCAAATATTAGCAT........................2011.00110

Generated: 05/18/2015 at 08:42 PM