ID:dsi_28395 |
Coordinate:3l:8124362-8124511 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3l_8124130_8124361_+]; CDS [3l_8124130_8124361_+]; intron [3l_8124362_8124777_+]
No Repeatable elements found
| ##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CGGCGACATCAAGTCGCAGGCCGAGGAGCGCGACGGTGATGTGGTGAAGGGTGAGTTTTCAATGGGCTAATAACCACAAATGATAGGTATAATCTATCCTGAAAGTCTAAATATCCTGAACTTCTCTATAAATCGAAAGACTTAGGCAACGAACTGAAATATATTGACATTGGCACTCAGCGGATTTGCAGAAGGGAACTTTAAACATTATTTTTCTGCTAACAAACGAAAGACTTAGGCAACGAACTTA **************************************************...(((((((..(((........))).....(((((((...)))))))(((.((((((......(((((.(((.((........)))))..))))).......((((....((.......))....)))).)))))).)))..)))))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M053 female body |
SRR902008 ovaries |
SRR618934 dsim w501 ovaries |
SRR553486 Makindu_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
M025 embryo |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................ATGGGCTAATAACTAGAAGTGAT...................................................................................................................................................................... | 23 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................ATCCTGGAAGTCTAAATA......................................................................................................................................... | 18 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................CGTGAGTTTTCAGTGGGCTGA.................................................................................................................................................................................... | 21 | 3 | 3 | 0.33 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...................................................................................................................................................................................................................TTTTCTGATGACAAACCAAAGA................. | 22 | 3 | 5 | 0.20 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..............................................................................................................................................................................................................................CAAACGAAAGACTTAGGC.......... | 18 | 0 | 15 | 0.07 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ........................................................................................................................................................................................TTTTCGGATGGGAACTTTAA.............................................. | 20 | 3 | 15 | 0.07 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| .......................TGGAGCGCGACGATGAT.................................................................................................................................................................................................................. | 17 | 2 | 18 | 0.06 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................GAGCGCGACGATGATC................................................................................................................................................................................................................. | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................................................................................................................TTTGCAGAGGGCAACTTTG............................................... | 19 | 3 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................................................................................TGCAGAAGGGAAGTTA................................................ | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .....................................................................................................................................................CGAACTGAAACATCTTG.................................................................................... | 17 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
|
GCCGCTGTAGTTCAGCGTCCGGCTCCTCGCGCTGCCACTACACCACTTCCCACTCAAAAGTTACCCGATTATTGGTGTTTACTATCCATATTAGATAGGACTTTCAGATTTATAGGACTTGAAGAGATATTTAGCTTTCTGAATCCGTTGCTTGACTTTATATAACTGTAACCGTGAGTCGCCTAAACGTCTTCCCTTGAAATTTGTAATAAAAAGACGATTGTTTGCTTTCTGAATCCGTTGCTTGAAT
**************************************************...(((((((..(((........))).....(((((((...)))))))(((.((((((......(((((.(((.((........)))))..))))).......((((....((.......))....)))).)))))).)))..)))))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM343915 embryo |
M024 male body |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|
| ...................................................................ATTATTGGTGTTTACCTTCC................................................................................................................................................................... | 20 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................................................................................................CAGATTTCGTTGCTTGACTT............................................................................................ | 20 | 3 | 5 | 0.40 | 2 | 0 | 2 | 0 |
| ...............................................................................................................................................................ATATAGCTGTAACCGT........................................................................... | 16 | 1 | 5 | 0.20 | 1 | 0 | 0 | 1 |
| ......................................................CAAGAGTTGCCCTATTATTG................................................................................................................................................................................ | 20 | 3 | 8 | 0.13 | 1 | 0 | 1 | 0 |
| ...........................................................................................................................................AGATTTCGTTGCTTGACTT............................................................................................ | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 |
Generated: 04/24/2015 at 10:42 AM