ID:

dsi_28393

 Coordinate:

2r:2033027-2033176 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.2 -7.2 -7.1 -7.0

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTTGTCCAATTTTTGTATACTGCTTTATAAATGGAATTTGGTAAAAAAAGGTAAATTTTATTCAAGTTTATGGCCAATTTAAGTAATAAATGCTCCACATACTTTTTGTGTTTTGACAAAAGTTTAAAATATGTAAATATGTACGAAATGTTTTATAATATTAACCAGTTTATCTGTATTATTGTTTAAAGGTAATGTAAAGTACATGGAATGTAGAAGTGTCTTCAACGCGAATGCACATATGCATATA
**********************************************************************************************************((..(((((((((.....(((.(((.((((((..((....((((((....)))))).))..)))))).))).)))))))).))))....))***************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M023
head
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 GSM343915
embryo
.........................................................................................................................................................................................................GTACATGGAATGTAGAAG............................... 18 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
...............TATACTGCTTTATAAATGGAATTTGG................................................................................................................................................................................................................. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
............TTGTATACTGCTTTATAAATGGAATT.................................................................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TGTAAAGTACATGGAATGTAGAAGTGTC........................... 28 0 1 2.00 2 0 0 0 1 0 0 0 0 1 0
..............GTATACTGCTTTATAAATGGA....................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................TAGTGTTTTGACAAAAGTAGAAA.......................................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................TGTGTTTTGACAAAAGTTTA............................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................CTGTATTATTGTTTAAAGGTAATG..................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................TATAAATGGAATTTGGTAAAAAAAGGT...................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............TGTATACTGCTTTATAAATGGAATT.................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TGTAAAGTACATGGAATGTAGAAGT.............................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.............TGTATACTGCTTTATAAATGGAATTTGG................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............TTGTATACTGCTTTATAAATGGAATTTGG................................................................................................................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........TTTTGTATACTGCTTTATAAATGGAATT.................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................TAAAGTGCATGGAATGTAGAA................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0
........................................................................................................................................................................................................AGCAGATGCAATGTAGAAGTGT............................ 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................TGTGTTTTGACAAAAGTAGAAAT......................................................................................................................... 23 3 5 0.60 3 0 3 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TGTAGTATTGTTTAAAGGAAA....................................................... 21 2 3 0.33 1 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................................................................TATTGTTTAATGGTAA....................................................... 16 1 16 0.19 3 0 3 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGTGTCATCAACGCG.................. 15 1 10 0.10 1 0 0 0 0 1 0 0 0 0 0
...............................................................................................CGCATATATTTTGTGTTTTG....................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0
......................................................................................................TTTTTGTGTTTTGAAAA................................................................................................................................... 17 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................TGGAATGTAGAAGTATG........................... 17 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0
..TGTCCATTCTTTGTATA....................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

AAACAGGTTAAAAACATATGACGAAATATTTACCTTAAACCATTTTTTTCCATTTAAAATAAGTTCAAATACCGGTTAAATTCATTATTTACGAGGTGTATGAAAAACACAAAACTGTTTTCAAATTTTATACATTTATACATGCTTTACAAAATATTATAATTGGTCAAATAGACATAATAACAAATTTCCATTACATTTCATGTACCTTACATCTTCACAGAAGTTGCGCTTACGTGTATACGTATAT
*****************************************************((..(((((((((.....(((.(((.((((((..((....((((((....)))))).))..)))))).))).)))))))).))))....))********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR1275487
Male larvae
.AACAGGCAAAAAACAAATGAC.................................................................................................................................................................................................................................... 21 3 19 0.63 12 8 0 4 0 0 0 0 0 0
...........................................................................................................................................................................................................................ACAGAAGTTGGGCCTA............... 16 2 20 0.30 6 0 0 0 0 4 0 1 0 1
.................................................................................................................................................................ATAGGTCCAATAGTCATAATA.................................................................... 21 3 4 0.25 1 0 1 0 0 0 0 0 0 0
.AACAGGCAAAAAACAAATGACG................................................................................................................................................................................................................................... 22 3 5 0.20 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................AAAAATTTTCATTGCATTTCAT.............................................. 22 3 6 0.17 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TTACAGAAGTTGGGCTTA............... 18 2 10 0.10 1 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................ATAGGAGCTGCGCTTACGT............ 19 3 20 0.10 2 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GAAGCTGCGCTTACGT............ 16 1 10 0.10 1 0 0 0 0 0 0 0 1 0
..............................................................................................................................................................................................................ACCTGACATCTTGATAGAA......................... 19 3 15 0.07 1 0 0 1 0 0 0 0 0 0
............................................................................................................................................................TTATAATTGGCCAAA............................................................................... 15 1 18 0.06 1 0 1 0 0 0 0 0 0 0
.......................ACATATTTACCTTAAA................................................................................................................................................................................................................... 16 1 20 0.05 1 0 0 0 1 0 0 0 0 0
.............................................................................................AGGTGTATGGAACACA............................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0
...............................................................................ATTGATTATTTACGA............................................................................................................................................................ 15 1 20 0.05 1 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:2032977-2033226 - dsi_28393 TTTGTCCA------------ATTTTT-GTATACTGC--TTTATAAATGGAATTTGGTAAAAAAAGGTAAATTTTATTCAAGTTTATGGCCAATTTAAGT---------------------------------------------------------------------AATAAATGCTCCACATACTT------TTTGTGTTTTGACAAAAGTTTAAAATATGTAAATATGT---------------------------------------------------------A-----------------------CG------A-A-----ATGTT--TTATAATATTAACC-AGTTTAT-------------------CTGTATTATTGTTTAAAG---------------------------------------------------------------------------GTAATGTAAAGTACATGGAATGTAGAAGTGT-----------------------------------------------CTT-CAAC------------------------GCGAA-TGCACATATGCA-----TATA
droSec2 scaffold_42:252035-252284 + TTTGTCCA------------ATTTTT-GTATACTGC--TTTATAAATGGAATTTGGTAAAAAAAGGTAAATTTTATTCAAGTTTATGGCCAATTTAAGT---------------------------------------------------------------------AATAAATGCTCCACATACTT------TTTGTGTTTTGACAAAAGTTTAAAATATGTAAATATGT---------------------------------------------------------A-----------------------CG------A-A-----ATGTT--TTATAATATTAACC-AGTTTAT-------------------CTGTATTATTGTTTAAAG---------------------------------------------------------------------------GTAATGTAAAGTACATGGAATGTAGAAGTGT-----------------------------------------------CTT-CAAC------------------------GCGAA-TGCACATATGCA-----TATA
dm3 chr2R:1009287-1009537 - TTTGTCCA------------ATTTTT-ATATACTGC--TTTATAAATGGAATTTGGTAAAAAAAGGTAAATTTTGTTCAAGTTTATGGCCAATTTAAGA---------------------------------------------------------------------ATTAAATGCTCCACATACTT-----TTTTGTGTTTTGACAAAAGTTTAAAATATGTAAATATGT---------------------------------------------------------A-----------------------CA------A-A-----ATGTT--TTATAATATTAACC-AGTTTAT-------------------CTGTATTATTGTTTAAAG---------------------------------------------------------------------------GTAATGTAAAGTACATGGAATGTAGAAGTGT-----------------------------------------------CTT-CAAC------------------------GCGAA-TGCACATATGCA-----TATA
droEre2 scaffold_4929:21887369-21887612 - TTTGTACA------------ACATTTTATATACTGC--TTTATAAATGGAATTTGGTAAAAAAAGGTAAATTTTGTT-------ATGGCCAATTTAAGT---------------------------------------------------------------------AATAAATATTGAATATATTTC----TTATGTGTTTTGCTAAAAGTTTACAATATGTAAATATGT---------------------------------------------------------T-----------------------CA------A-A-----ATGTT--TTAAAATATTAACCAAGTTT-----------------------GTATTATTGTTTAAAG---------------------------------------------------------------------------GTAATGTAAAGTACATGGAATGTAGAAGTGT-----------------------------------------------CTT-CAAC-----------------------TGCGAA-TGCACATATGCA-----TATA
droYak3 v2_chr2L_random_028:805978-806223 + TTTGTAAA------------ACTTTTTATACACTC---CTTATAAATGGAATTTGGTAAAAAAAGGTAAATTTTTTTGAAGTCTATTGCCAATTTAAGT---------------------------------------------------------------------AGTAAATATTGAATATATTTTG----TATGTGTTTTGCTAAATGTTTAAAATATG--------T---------------------------------------------------------A-----------------------CA------A-A-----ATGTT--TTAAAGTATTAACCAAGTTTGT-------------------CTGCATTATTGTTTAAAG---------------------------------------------------------------------------GTAATGTAAAGTACATGGAATGTAGAAGTGT-----------------------------------------------CTT-TAAC-----------------------TGCGAA-TGCACATATGCA-----TATA
droEug1 scf7180000409360:212-377 - TAAT--CA------------ATCAAATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------TT------TATATGGTA-------------------------------TTTTTAACACATA--------------------------TAA-CATAAATATATA-TATATATGTATGTAA---------------------------------A--------------------TACATATTTACATATATA--------------------CATAT--------------------------ATACATATATACATATATATATATA------------------------------TACA------------------------------------TATATACATA----------TATACATATATAC------------------------ATATA-TACATATATACA-----TATA
droBia1 scf7180000299946:76069-76309 - TTTGTTCA------------ATTTATATTTTTCTGC-TTTTATAAATGGAATTAGGAAAGAAAAGGTAAGTGTTCGTGAAA-TAGCAGCCGATTTAACGAA----------------A------AACATTATTT------------------------------------------------------------TTAA----TTAAGAGAAGTCTAACGTAAGTTAGAAATTGG-------------------------------------------------------A-----------------------CG------A-C-----ATAGTTTTTAAAATAATAAATAA----------------------------AATAATAAATAAATA---------------------------------------------------------------------------CTTATGAAAACCACCTCCAGCGGAAAGCTAT-------------------------------------------TTATGTGGCACC------------------------CCGTA-TATATTTATGCA-----CATA
droTak1 scf7180000415265:40381-40683 + TTTGTTCG------------ACTGTTAATTTACTGT--TTTATAAATGGAATTAGGA-AAAAAAGGTAAATGTTTCTAAA-TTCAGGGTTAATTTAACA---TTCAATATTTAATAATATTCTATTTTTTAAGTTTAAAGTAAGTAAAAATGTCATCCAATC--------------------------------------------------------------------------------ATTTTAGTATAGTTAACTTTTTCT----------------------------------------------------------------------CTAAAACATATAGA-----------------------------------------------------------------------------------TATATGTATGTATGTATGTATGTATATATGTAAGAAAGTAATGTTGAGTACATGGATTGTTTCT-----TA-ATG----------GTTTATGCTTTAT----TCAGTT-------CAT-GCAC-----------------------TGCCAA-TGCACATACGCGTTTATCATA
droEle1 scf7180000488451:12959-13187 - TTTGTACA------------ATTTTTAATTTACTGC--TCTATAAATGGAATTTGGAAAAAAAAGGTAAACTTTT--AAAAATGAAGCTCAGTTTAAAA--ATTTCGTATTTACTATA------ATTTCTAATT-GAAGTTAAGTAAAG------------------------------------TCTTC----TATTTGTTTTT------------------------------------------------------------------------------------------------------------------------------------CTTAATATTAACA-TATCTGT-------------------ATACATTAT---GTAGA----------------------------------------ACCTACTTGTACGTATGTA----CATACCTTCAAGATTA-----------------------------------------------------------------------------------------------------------ATGT--CTTACATACATA-----CATG
droRho1 scf7180000776638:16615-16855 - AATGTGTTT--------------------GTAAAGC--AATAAAAATTGATTAAGTTAAAAAA-ATAAAATATTGTATAT-ATTATATATTATATATTA---------------------------------------------------------------------------------------------------------------------------------------TTTATAATAT------------------ATACATA-ATATAT-TATATATATATA-TGTATATGTATTTATAATATATATA------T-A-----ATATA--TTA--------------------TATATATATGTATATGTA--------------------TATGT--------------------------ATATGTATATGTATATGTATATGTA------------------------------TATG------------------------------------TATATGTATA----------TGTATATGTATAT------------------------GTATA-TGTATATGTATA-----TGTA
droFic1 scf7180000453161:9746-9974 + TTTGTCGA------------ATTTTAAATTTACTGA--TTTTCAAATGGAATTTGGCAAAAAAAGGTAAATGTTTTTAAA-TAAGGGTTCGATTTTAAT--AATT----------------------------------------------------------------------------------------CGAAGTGTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTTTATAA---GTAATGAAGAGAAAACTGCTTTAGTTCGCA---------------------------------------------TTGAAAATAAGTTACA---------------------GATTAAAAA----CAAATTTACAAAT---CT-------TTA-TGTTTGTGTATGTACATAGTATATTTA-TTGCC-TACATTTATGTG-----CTTA
droKik1 scf7180000302643:32955-33145 + TTTGTGCA------------CTCAAAAATTAAATAA--CTTTTAGATGGAACTTGGTAAAAAAAGGTAATTGTTATTAAC-TTTATTTTAAAATTTAAC---------------------------------------------------------------------CATATATAACCCATA----------------------------------------------------------------------------------------------------------A-----------------------CA------A-A-----ATAAC--TTA----------------------------------------------------------------------------------------------------------------------------------------------------CAATGAATGTTCAGTTATGTGTACAATAAATA----CATACATATACATTAATT-------TAA--AAC------------------T----TGTATA-TGCACATGCATA-----CATA
droAna3 scaffold_13077:102780-102947 + TGTTTTAT----------------------------------------GATTTTGTTAAATAAAGGCAAAATCAG----------GATT--------------------------------------TTTAT------------------------------------TATGAA----------------------------TGAAAAAAAGACTACTC-----------------------------------------------------------------------------------------------------------------GTTATAAAAATGAAAAATAC----------------------------GT----------------------------------------------TAATAAATTT-------------------------------------------------CATTGTATTTATATGTATATGTATA-----------TGTATATGTA----------T----ATG-TAT-------------------ATGTATATGTA-TATGTATATGTA-----TATG
droBip1 scf7180000392928:5487-5620 - GTAT-ATG------------ATATGT-ATATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAT---------------------------------------------------------ATGTATATGTATATG------------------------------------TA-----------------TATGTATATGTATATGTA--------------------TATGT--------------------------ATATGTATATGTATATGTATATGTA------------------------------TATG------------------------------------TATATGTATA----------TGTATATGTATAT------------------------GTATA-TGTATATGTATA-----TGTA
dp5 Unknown_group_200:14370-14615 + TTTGTTCG------------ACTTTAAATTCATTCA--TTTATAGATGGAACTTGGAAAAAAAAGGTAAAAATGAG----------GTA-----------------------------------------------------CACACAGATGATACCTAATCTATAGAAACAATTGTTA--CGT--CTTG---TGGTGTGTATTGATAAAATATTTAGTCTTATA----CAT---------------------------------------------------------A-----------------------AATATTTTTACTTGCATCGCT--T--------TTGT-AAGTTTGTTT----------------TCAGGCTCATAGTCTTATG--------------------------------------------------GTTATGTA------------------------CATACATAT-GTATGT-------------------------------------------------------------AT------------------------GTATG-TACATATATGCA-----TATG
droPer2 scaffold_125:74969-75244 + TTTGTTCG------------ACTTTAAATTCATTCA--TTTATAGATGGAACTTGGAAAAAAAAGGTAAAAATGAG----------GTA-----------------------------------------------------CACACAGATGATACCTAATCTGTAGAAACAATTGTTA--CGT--CTTG---TGGTGTGTATTGATAAAATATTTAGTCTTATA----CAT---------------------------------------------------------A-----------------------CATATTTTTACTTGCATCGCT--T--------TTGT-AAGTTTGTTT----------------TCAGGCTCATAGTCTTATG----GTT--------------------------ATGTACATATGTATGTATGTATGTA------------------------------CATA------------------------------------TATGCATATG----------CAATCATTTATGC------------------------ACGAA-CATATATATGTA-----TGTA
droWil2 scf2_1100000004521:4900048-4900293 - TTTGTCGTTGTGTTTT-TTAACTCCCAATTTAATAAGTTTTGTAGATGGAACTTGGCAAAAAAAGGTAAAAATGGTTAAG-T-G-------ATTTGTTAAA----------------A------ACTATAGTTT------------------------------------------------------------TTTGTGTA----T---------AAAAATGTAGAAACAT---------------------------------------------------------A-----------------------CA------A-A-----A------------AATTAATT--GTGTGT-------------------CTGTTGGATAAAAAAAGGGAAATAT--------------------------CAATAGGATCCGATATACATACATA------------------------------CATG-----CATATGTAT-------------------------------C----------TCTGTACGTACAT------------------------ACATATAATGTGCGTGCA-----TATG
droVir3 scaffold_13246:485840-486090 + TTTGATGC------------ACTTTTAG-TTAGTGC--CTGGCAAGTGGG--TTGGTAATAAA-GTCAGGGGTG----------------------AG-----------------------------------------------------------------------------------TATGTTTT------GTAT-----------------------------------------ATATGTATGTATGCATGAATATATGTATAAATGTATATATGTATATATA-TATATATATATATATA-------TGTATATATGTATGTACTAA--------------------------TGTATGTAAGTATGTATA--------------------TATGT--------------------------ATGTACTAATGTATGTAAGTATGTA------------------------------TATA------------------------------------TGTATAAATG----------TATATATGTATGT------------------------AAGTA-TGTATGTATGTA-----TGTA
droMoj3 scaffold_6500:30120173-30120378 + TTTGTATTTACATATTTGGAACACCCAGTTGAAGTA--ATTGTAAATGGAACTTGGGAAAAAAAGGTAACATTTGTTTATATATAT----ATATTAAGC---------------------------------------------------------------------A--------------TACATA-CATATATGTGTATAGGCTGATAATTAAATTAAACTTATAGGC---------------------------------------------------------T-----------------------CG------C-A-----TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-TTC----------CTGTAGACTTGAA----TGAGTTTGTTTTTTC------------------------------GTGGT-TGTGTATATGAAATG--AACG
droGri2 scaffold_14624:2197515-2197674 + TAAATT------------------------------------------------------------------TTTTGCTAGACAATGGTCTTTTGAACT---------------------------------------------------------------------GTGAGACACTGTACATATGT-----ATATGTA--TCAA---------------------------------------------------------------------------------------------------------------------------------------------------------TCTATGTATGTACATATG--------------------TATGT--------------------------ATGTACATATGTATGTATGTATGTA------------------------------CATA------------------------------------TGTATGTATG----------TACATATGTATGT------------------------ATGTA-CATATGTATGTA-----TGTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTTGTCCA------------ATTTTT-GTATACTGC--TTTATAAATGGAATTTGGTAAAAAAAGGTAAATTTTATTCAAGTTTATGGCCAATTTAAGT---------------------------------------------------------------------AATAAATGCTCCACATACTT------TTTGTGTTTTGACAAAAGTTTAAAATATGTAAATATGT---------------------------------------------------------A-----------------------CG------A-A-----ATGTT--TTATAATATTAACC-AGTTTAT-------------------CTGTATTATTGTTTAAAG---------------------------------------------------------------------------GTAATGTAAAGTACATGGAATGTAGAAGTGT-----------------------------------------------CTT-CAAC------------------------GCGAA-TGCACATATGCA-----TATASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACATGGAATGTAGAAG.............................................................................................................1812.00220000000000000000
............................TATACTGC--TTTATAAATGGAATTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000002000000000
........................TT-GTATACTGC--TTTATAAATGGAATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000002000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAAGTACATGGAATGTAGAAGTGT-----------------------------------------------C..........................................................2812.00200010000000010000
...........................GTATACTGC--TTTATAAATGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
....................................................................................................................................................................................................TGTGTTTTGACAAAAGTTTA.......................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................CTGTATTATTGTTTAAAG---------------------------------------------------------------------------GTAATG...................................................................................................................................2411.00110000000000000000
........................................TATAAATGGAATTTGGTAAAAAAAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
.........................T-GTATACTGC--TTTATAAATGGAATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAAGTACATGGAATGTAGAAGT............................................................................................................2511.00100010000000000000
.........................T-GTATACTGC--TTTATAAATGGAATTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
........................TT-GTATACTGC--TTTATAAATGGAATTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000000100000000
......................TTTT-GTATACTGC--TTTATAAATGGAATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000010000000
droSec2
TTTGTCCA------------ATTTTT-GTATACTGC--TTTATAAATGGAATTTGGTAAAAAAAGGTAAATTTTATTCAAGTTTATGGCCAATTTAAGT---------------------------------------------------------------------AATAAATGCTCCACATACTT------TTTGTGTTTTGACAAAAGTTTAAAATATGTAAATATGT---------------------------------------------------------A-----------------------CG------A-A-----ATGTT--TTATAATATTAACC-AGTTTAT-------------------CTGTATTATTGTTTAAAG---------------------------------------------------------------------------GTAATGTAAAGTACATGGAATGTAGAAGTGT-----------------------------------------------CTT-CAAC------------------------GCGAA-TGCACATATGCA-----TATASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................................................................................................................................................................................................................GTTTAT-------------------CTGTATTATTGTTTAAAG---------------------------------------------------------------------------GT.......................................................................................................................................2611.0010010
dm3
TTTGTCCA------------ATTTTT-ATATACTGC--TTTATAAATGGAATTTGGTAAAAAAAGGTAAATTTTGTTCAAGTTTATGGCCAATTTAAGA---------------------------------------------------------------------ATTAAATGCTCCACATACTT-----TTTTGTGTTTTGACAAAAGTTTAAAATATGTAAATATGT---------------------------------------------------------A-----------------------CA------A-A-----ATGTT--TTATAATATTAACC-AGTTTAT-------------------CTGTATTATTGTTTAAAG---------------------------------------------------------------------------GTAATGTAAAGTACATGGAATGTAGAAGTGT-----------------------------------------------CTT-CAAC------------------------GCGAA-TGCACATATGCA-----TATASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................TAAATGGAATTTGGTAAAAAAAGGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................ATGGAATTTGGTAAAAAAAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................AAATGGAATTTGGTAAAAAAAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATACTGC--TTTATAAATGGAATTTGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................ATAAATGGAATTTGGTAAAAAAAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTACATGGAATGTAGAAG.............................................................................................................2012.0020000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAAGTACATGGAATGTAGAAG.............................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ATGGAATTTGGTAAAAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
...........................................AAATGGAATTTGGTAAAAAAAGGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................GAATTTGGTAAAAAAAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC------------------------GCGAA-TGCACATATGCA-----T...2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TACTT-----TTTTGTGTTTTGACA...............................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
.........................T-ATATACTGC--TTTATAAATGGAATTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................CTGTATTATTGTTTAAAG---------------------------------------------------------------------------GTA......................................................................................................................................2112.0020000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TATACTGC--TTTATAAATGGAATTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TACTGC--TTTATAAATGGAATTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TATACTGC--TTTATAAATGGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................TTATAAATGGAATTTGGTAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GTTTAT-------------------CTGTATTATTGTTTA.......................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAAGTGT-----------------------------------------------CTT-CAAC------------------------GCGAA-TG...................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ACTGC--TTTATAAATGGAATTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAATGTAGAAGTGT-----------------------------------------------CTT-.......................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGTAAAGTACATGGAA.....................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TTTATAAATGGAATTTGGTAAAAAAAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................C--TTTATAAATGGAATTTGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................TT-ATATACTGC--TTTATAAATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTACATGGAATGTAGAAGT............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TGGAATTTGGTAAAAAAAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................TATACTGC--TTTATAAATGGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGT-----------------------------------------------CTT-CAAC------------------------GCGAA-TGCA.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................AAGTTTATGGCCAATTTAAGA---------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTACATGGAATGTAGAAGTGT-----------------------------------------------CT.........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTT-CAAC------------------------GCGAA-TGCACATATGCA-----TA..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TTATGGCCAATTTAAGA---------------------------------------------------------------------ATTAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTACATGGAATGTAGAAGTG...........................................................................................................2211.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAAAGTACATGGAATGTA.................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TTTGTCCA------------ATTTTT-ATATACTGC--TTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TTTGTCCA------------ATTTTT-ATATACTGC--T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGTAAAGTACATGGAATG...................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TGC--TTTATAAATGGAATTTGGTAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ATATACTGC--TTTATAAATGGAATTTGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................ACC-AGTTTAT-------------------CTGTATTATTGTTTAAAG---------------------------------------------------------------------------.........................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTTTT-ATATACTGC--TTTATA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ACTGC--TTTATAAATGGAATTTGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAAGTACATGGAATGTAGAAGTGT-----------------------------------------------C..........................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TATAAATGGAATTTGGTAAAAAAAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................ATATACTGC--TTTATAAATGGAATTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TTATAAATGGAATTTGGTAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..............................TACTGC--TTTATAAATGGAATTTGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................T-ATATACTGC--TTTATAAATGGAATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-CAAC------------------------GCGAA-TGCACATA.............1911.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TGGAATTTGGTAAAAAAAGGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAAGTACATGGAATGTAGAAGTGT-----------------------------------------------CT.........................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ACTGC--TTTATAAATGGAATTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................C-AGTTTAT-------------------CTGTATTATTGTTTAAAG---------------------------------------------------------------------------.........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TATAAATGGAATTTGGTAAAAAAAGGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACATGGAATGTAGAAGTG...........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAAGTACATGGAATG...................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-----------------------------------------------CTT-CAAC------------------------GCGAA-TGCACA...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAGAAGTGT-----------------------------------------------CTT-CAAC------------------------GCGAA-TGCAC................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAATGTAGAAGTGT-----------------------------------------------CTT-C......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................T-ATATACTGC--TTTATAAATGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GTCCA------------ATTTTT-ATATACTGC--T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TTTATAAATGGAATTTGGTAAAAAAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................TGGAATTTGGTAAAAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACATGGAATGTAGAAGTGT-----------------------------------------------...........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TTGACAAAAGTTTAAAATATG................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TTATAAATGGAATTTGGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATGGAATGTAGAAGTGT-----------------------------------------------CTT-CA.....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............................TATACTGC--TTTATAAATGGAATTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ATGGAATTTGGTAAAAAAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................ATTTTGTTCAAGTTTATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..................................................ATTTGGTAAAAAAAGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................AAATGGAATTTGGTAATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
droEre2
TTTGTACA------------ACATTTTATATACTGC--TTTATAAATGGAATTTGGTAAAAAAAGGTAAATTTTGTT-------ATGGCCAATTTAAGT---------------------------------------------------------------------AATAAATATTGAATATATTTC----TTATGTGTTTTGCTAAAAGTTTACAATATGTAAATATGT---------------------------------------------------------T-----------------------CA------A-A-----ATGTT--TTAAAATATTAACCAAGTTT-----------------------GTATTATTGTTTAAAG---------------------------------------------------------------------------GTAATGTAAAGTACATGGAATGTAGAAGTGT-----------------------------------------------CTT-CAAC-----------------------TGCGAA-TGCACATATGCA-----TATASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................ATAAATGGAATTTGGTAAAAAAAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
..........................TATATACTGC--TTTATAAATGGAATTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
..................................GC--TTTATAAATGGAATTTGGTAAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.............................ATACTGC--TTTATAAATGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
droYak3
TTTGTAAA------------ACTTTTTATACACTC---CTTATAAATGGAATTTGGTAAAAAAAGGTAAATTTTTTTGAAGTCTATTGCCAATTTAAGT---------------------------------------------------------------------AGTAAATATTGAATATATTTTG----TATGTGTTTTGCTAAATGTTTAAAATATG--------T---------------------------------------------------------A-----------------------CA------A-A-----ATGTT--TTAAAGTATTAACCAAGTTTGT-------------------CTGCATTATTGTTTAAAG---------------------------------------------------------------------------GTAATGTAAAGTACATGGAATGTAGAAGTGT-----------------------------------------------CTT-TAAC-----------------------TGCGAA-TGCACATATGCA-----TATASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
TAAT--CA------------ATCAAATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------TT------TATATGGTA-------------------------------TTTTTAACACATA--------------------------TAA-CATAAATATATA-TATATATGTATGTAA---------------------------------A--------------------TACATATTTACATATATA--------------------CATAT--------------------------ATACATATATACATATATATATATA------------------------------TACA------------------------------------TATATACATA----------TATACATATATAC------------------------ATATA-TACATATATACA-----TATASizeHit CountTotal NormTotal
No Reads
droBia1
TTTGTTCA------------ATTTATATTTTTCTGC-TTTTATAAATGGAATTAGGAAAGAAAAGGTAAGTGTTCGTGAAA-TAGCAGCCGATTTAACGAA----------------A------AACATTATTT------------------------------------------------------------TTAA----TTAAGAGAAGTCTAACGTAAGTTAGAAATTGG-------------------------------------------------------A-----------------------CG------A-C-----ATAGTTTTTAAAATAATAAATAA----------------------------AATAATAAATAAATA---------------------------------------------------------------------------CTTATGAAAACCACCTCCAGCGGAAAGCTAT-------------------------------------------TTATGTGGCACC------------------------CCGTA-TATATTTATGCA-----CATASizeHit CountTotal NormTotal
No Reads
droTak1
TTTGTTCG------------ACTGTTAATTTACTGT--TTTATAAATGGAATTAGGA-AAAAAAGGTAAATGTTTCTAAA-TTCAGGGTTAATTTAACA---TTCAATATTTAATAATATTCTATTTTTTAAGTTTAAAGTAAGTAAAAATGTCATCCAATC--------------------------------------------------------------------------------ATTTTAGTATAGTTAACTTTTTCT----------------------------------------------------------------------CTAAAACATATAGA-----------------------------------------------------------------------------------TATATGTATGTATGTATGTATGTATATATGTAAGAAAGTAATGTTGAGTACATGGATTGTTTCT-----TA-ATG----------GTTTATGCTTTAT----TCAGTT-------CAT-GCAC-----------------------TGCCAA-TGCACATACGCGTTTATCATASizeHit CountTotal NormTotal
No Reads
droEle1
TTTGTACA------------ATTTTTAATTTACTGC--TCTATAAATGGAATTTGGAAAAAAAAGGTAAACTTTT--AAAAATGAAGCTCAGTTTAAAA--ATTTCGTATTTACTATA------ATTTCTAATT-GAAGTTAAGTAAAG------------------------------------TCTTC----TATTTGTTTTT------------------------------------------------------------------------------------------------------------------------------------CTTAATATTAACA-TATCTGT-------------------ATACATTAT---GTAGA----------------------------------------ACCTACTTGTACGTATGTA----CATACCTTCAAGATTA-----------------------------------------------------------------------------------------------------------ATGT--CTTACATACATA-----CATGSizeHit CountTotal NormTotal
No Reads
droRho1
AATGTGTTT--------------------GTAAAGC--AATAAAAATTGATTAAGTTAAAAAA-ATAAAATATTGTATAT-ATTATATATTATATATTA---------------------------------------------------------------------------------------------------------------------------------------TTTATAATAT------------------ATACATA-ATATAT-TATATATATATA-TGTATATGTATTTATAATATATATA------T-A-----ATATA--TTA--------------------TATATATATGTATATGTA--------------------TATGT--------------------------ATATGTATATGTATATGTATATGTA------------------------------TATG------------------------------------TATATGTATA----------TGTATATGTATAT------------------------GTATA-TGTATATGTATA-----TGTASizeHit CountTotal NormTotal
No Reads
droFic1
TTTGTCGA------------ATTTTAAATTTACTGA--TTTTCAAATGGAATTTGGCAAAAAAAGGTAAATGTTTTTAAA-TAAGGGTTCGATTTTAAT--AATT----------------------------------------------------------------------------------------CGAAGTGTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTTTATAA---GTAATGAAGAGAAAACTGCTTTAGTTCGCA---------------------------------------------TTGAAAATAAGTTACA---------------------GATTAAAAA----CAAATTTACAAAT---CT-------TTA-TGTTTGTGTATGTACATAGTATATTTA-TTGCC-TACATTTATGTG-----CTTASizeHit CountTotal NormTotal
No Reads
droKik1
TTTGTGCA------------CTCAAAAATTAAATAA--CTTTTAGATGGAACTTGGTAAAAAAAGGTAATTGTTATTAAC-TTTATTTTAAAATTTAAC---------------------------------------------------------------------CATATATAACCCATA----------------------------------------------------------------------------------------------------------A-----------------------CA------A-A-----ATAAC--TTA----------------------------------------------------------------------------------------------------------------------------------------------------CAATGAATGTTCAGTTATGTGTACAATAAATA----CATACATATACATTAATT-------TAA--AAC------------------T----TGTATA-TGCACATGCATA-----CATASizeHit CountTotal NormTotal
No Reads
droAna3
TGTTTTAT----------------------------------------GATTTTGTTAAATAAAGGCAAAATCAG----------GATT--------------------------------------TTTAT------------------------------------TATGAA----------------------------TGAAAAAAAGACTACTC-----------------------------------------------------------------------------------------------------------------GTTATAAAAATGAAAAATAC----------------------------GT----------------------------------------------TAATAAATTT-------------------------------------------------CATTGTATTTATATGTATATGTATA-----------TGTATATGTA----------T----ATG-TAT-------------------ATGTATATGTA-TATGTATATGTA-----TATGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
GTAT-ATG------------ATATGT-ATATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAT---------------------------------------------------------ATGTATATGTATATG------------------------------------TA-----------------TATGTATATGTATATGTA--------------------TATGT--------------------------ATATGTATATGTATATGTATATGTA------------------------------TATG------------------------------------TATATGTATA----------TGTATATGTATAT------------------------GTATA-TGTATATGTATA-----TGTASizeHit CountTotal NormTotal
No Reads
dp5
TTTGTTCG------------ACTTTAAATTCATTCA--TTTATAGATGGAACTTGGAAAAAAAAGGTAAAAATGAG----------GTA-----------------------------------------------------CACACAGATGATACCTAATCTATAGAAACAATTGTTA--CGT--CTTG---TGGTGTGTATTGATAAAATATTTAGTCTTATA----CAT---------------------------------------------------------A-----------------------AATATTTTTACTTGCATCGCT--T--------TTGT-AAGTTTGTTT----------------TCAGGCTCATAGTCTTATG--------------------------------------------------GTTATGTA------------------------CATACATAT-GTATGT-------------------------------------------------------------AT------------------------GTATG-TACATATATGCA-----TATGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................A--TTTATAGATGGAACTTGGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.TTGTTCG------------ACTTTAAATTCATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000010
.........................................ATAGATGGAACTTGGAAAAAAAAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..................................CA--TTTATAGATGGAACTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
......................................TTTATAGATGGAACTTGGAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGTA------------------------CATACATAT-GTATGT-------------------------------------------------------------AT------------------------...........................2511.0010100000000
..............................CATTCA--TTTATAGATGGAACTTGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGTA------------------------CATACATAT-GTATGT-------------------------------------------------------------AT------------------------GTA........................2811.0010100000000
droPer2
TTTGTTCG------------ACTTTAAATTCATTCA--TTTATAGATGGAACTTGGAAAAAAAAGGTAAAAATGAG----------GTA-----------------------------------------------------CACACAGATGATACCTAATCTGTAGAAACAATTGTTA--CGT--CTTG---TGGTGTGTATTGATAAAATATTTAGTCTTATA----CAT---------------------------------------------------------A-----------------------CATATTTTTACTTGCATCGCT--T--------TTGT-AAGTTTGTTT----------------TCAGGCTCATAGTCTTATG----GTT--------------------------ATGTACATATGTATGTATGTATGTA------------------------------CATA------------------------------------TATGCATATG----------CAATCATTTATGC------------------------ACGAA-CATATATATGTA-----TGTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGC------------------------ACGAA-CATATATATGT..........2215.005020210
........................................................................................A-----------------------------------------------------CACACAGATGATACCTAATCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATGC------------------------ACGAA-CATATATATGT..........2311.001000010
droWil2
TTTGTCGTTGTGTTTT-TTAACTCCCAATTTAATAAGTTTTGTAGATGGAACTTGGCAAAAAAAGGTAAAAATGGTTAAG-T-G-------ATTTGTTAAA----------------A------ACTATAGTTT------------------------------------------------------------TTTGTGTA----T---------AAAAATGTAGAAACAT---------------------------------------------------------A-----------------------CA------A-A-----A------------AATTAATT--GTGTGT-------------------CTGTTGGATAAAAAAAGGGAAATAT--------------------------CAATAGGATCCGATATACATACATA------------------------------CATG-----CATATGTAT-------------------------------C----------TCTGTACGTACAT------------------------ACATATAATGTGCGTGCA-----TATGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................AGGTAAAAATGGTTAAG-T-G-------ATT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
........................CCAATTTAATAAGTTTTGTAGATGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
...........................ATTTAATAAGTTTTGTAGATGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
...................................................................................................................................................................................................................................................................................................................................A-----A------------AATTAATT--GTGTGT-------------------CT....................................................................................................................................................................................................................................1811.00100010
......................................TTTGTAGATGGAACTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
droVir3
TTTGATGC------------ACTTTTAG-TTAGTGC--CTGGCAAGTGGG--TTGGTAATAAA-GTCAGGGGTG----------------------AG-----------------------------------------------------------------------------------TATGTTTT------GTAT-----------------------------------------ATATGTATGTATGCATGAATATATGTATAAATGTATATATGTATATATA-TATATATATATATATA-------TGTATATATGTATGTACTAA--------------------------TGTATGTAAGTATGTATA--------------------TATGT--------------------------ATGTACTAATGTATGTAAGTATGTA------------------------------TATA------------------------------------TGTATAAATG----------TATATATGTATGT------------------------AAGTA-TGTATGTATGTA-----TGTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................GTAATAAA-GTCAGGGGTG----------------------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000100
......................................................GGTAATAAA-GTCAGGGGTG----------------------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...............................AGTGC--CTGGCAAGTGGG--TTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.331000000000000001000000000000000000000000000000000000000000000000
..........................AG-TTAGTGC--CTGGCAAGTGGG--TTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.331000000000000000000000010000000000000000000000000000000000000000
...............................AGTGC--CTGGCAAGTGGG--TTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.331000000010000000000000000000000000000000000000000000000000000000
..................................GC--CTGGCAAGTGGG--TTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331000000010000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGT------------------------AAGTA-TGTATGTAG............20200.051000000000000000000000000100000000000000000000000000000000000000
droMoj3
TTTGTATTTACATATTTGGAACACCCAGTTGAAGTA--ATTGTAAATGGAACTTGGGAAAAAAAGGTAACATTTGTTTATATATAT----ATATTAAGC---------------------------------------------------------------------A--------------TACATA-CATATATGTGTATAGGCTGATAATTAAATTAAACTTATAGGC---------------------------------------------------------T-----------------------CG------C-A-----TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-TTC----------CTGTAGACTTGAA----TGAGTTTGTTTTTTC------------------------------GTGGT-TGTGTATATGAAATG--AACGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...GTATTTACATATTTGGAACACCCAGTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
..............................GAAGTA--ATTGTAAATGGAACTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................................TGTAAATGGAACTTGGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
............TATTTGGAACACCCAGTTGAAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
...............................................GGAACTTGGGAAAAAAAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
droGri2
TAAATT------------------------------------------------------------------TTTTGCTAGACAATGGTCTTTTGAACT---------------------------------------------------------------------GTGAGACACTGTACATATGT-----ATATGTA--TCAA---------------------------------------------------------------------------------------------------------------------------------------------------------TCTATGTATGTACATATG--------------------TATGT--------------------------ATGTACATATGTATGTATGTATGTA------------------------------CATA------------------------------------TGTATGTATG----------TACATATGTATGT------------------------ATGTA-CATATGTATGTA-----TGTASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
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Generated: 05/18/2015 at 05:24 PM