ID:

dsi_28335

 Coordinate:

3l:4148754-4149311 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-59.2 -59.1 -59.0

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
(TCG)nSimple_repeatSimple_repeat+

Sense Strand Reads

TGTCGCCGTCGTCGTTGTCGTCGCCGTCGTAGTTGTCGTTGTCGTTGTTGGTCTGTCTCTGTATTGTTGCCACTAAAGAAAGGCAAGAGGAACCGAAAATGCCACGAAAGAAAATGTGGAGCGTGAATGTGACAATTGTTCAGCGTTAGCAACTTTTGACCCCGTGCGCAATCAGGTCACCATTGTTCCATGGTAAACAGTGGTAGCCCAAAGAACAGCGAATGTGTGCTGCTGATTTGTGATTGAAAATGCGTAATCCTCGTTCCGTTGTCATCGTGTTCACCGCGTAACCTGAACCTTGAGTAAACACACACAGGCGCAACTCGGACACTTACAAACACATACACGCTCACAAACGGGAGCACGCAACTCTACGTCACAAGAACTGGAAAGAGGTGTGGGGCGGTGGGGGGAGAGGCTTAGAAGTGAAGAGGCCCCAACCGAAATACCTGAAAATTGTAACTCAACTACATTTAATTGATCTCCAAGAGAAGGTGGGGGGAAGGGTCCCAGCAAGGTGGTTCTTATAAATCTTTTTATATGGTGCCTCCTAAAAAATCGTTTCGTGCTAGGCACAAGAAGTTGGCTCTGCTCTAGCCCACTCACTCACTCCTTTGGGAGGTCCTTTGCCGCATAATTTCGATTGGAGCTGGCACTC
**************************************************************************************************************************************************.....((((((..((.(((.........(((.(((((((((........))))))))).))).........)))..((((((((.(((.(((((((.((...(((.((.......((((.(((((...((((.....))))...((((.....((......))....)))).)))))..))))........)).)))...)).)))))))))).))))))))..(((........)))...))..)))))).******************************************************************************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 O001
Testis
 M023
head
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 M053
female body
....................................................................................................................................................................................................................................................................................................................................................................................TACGTCACAAGAACTGGAAAGAGGTG.................................................................................................................................................................................................................................................................... 26 0 1 2.00 2 0 0 1 0 0 0 0 0 1 0 0 0
..................................................................................................................................................TAGCAACTTTTGACCCCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 19 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAGAAGTGAGGATGCC.............................................................................................................................................................................................................................. 18 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................TTCCGTTGTCATCGTGTTCACCGC.................................................................................................................................................................................................................................................................................................................................................................................... 24 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATCGTTTCGTGCTAGGC.................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................................................GTGGGGCGGTGGGGGGAGAGGCT.............................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCATAATTTCGATTG............ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................CAGGCGCAACTCGGACACTTAA................................................................................................................................................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGTTGGCTCTGCTCTTT............................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................................................CACAAGAACTGGAAAGAGGTGTA.................................................................................................................................................................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................................TCTACGTCACAAGAACTGGAAAGAGGTGT................................................................................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................GTTAGCAACTTTTGACCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCTTTGAAGTGA..................................................................................................................................................................................................................................... 15 1 10 0.50 5 0 0 0 0 0 0 5 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGGAGGCTTAGAAGTG...................................................................................................................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCTTTGAAGTGAGGACGC............................................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................GCGGATTTGTGATTGAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................... 18 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................................................................................AGGCTTAGAAGTGTGGACGCC.............................................................................................................................................................................................................................. 21 3 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................................................................GGAAATAGGTGTGGAGCGGGGG......................................................................................................................................................................................................................................................... 22 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0
...........TCGCTGTCGTCGCCTTCGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 20 2 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................................................................................................................................................................................................GCTGGGATGAGGTGTGGGG............................................................................................................................................................................................................................................................... 19 3 20 0.30 6 0 3 0 0 0 2 0 0 0 0 0 1
................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTTAGAAGTGAGAATGCC.............................................................................................................................................................................................................................. 20 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................CGGGCGCTATCATGTCACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 19 3 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGGCTTTGAAGTGA..................................................................................................................................................................................................................................... 17 2 11 0.18 2 0 0 0 0 0 0 2 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCTTTGAAGTGAGGA.................................................................................................................................................................................................................................. 18 2 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTTAGAAGTGAAAATGCC.............................................................................................................................................................................................................................. 20 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................GTCATCGTGTGAACCGC.................................................................................................................................................................................................................................................................................................................................................................................... 17 2 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................TAAAGACAGCCAAGAGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 18 2 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................AGAACAAGTGGAGCGTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................................................................................................................................................................................................................AGGCTTTGAAGTGAGGA.................................................................................................................................................................................................................................. 17 2 12 0.08 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGCCCCAAGGGAAA.................................................................................................................................................................................................................... 17 2 14 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTTTGAAGTGAGGACGC............................................................................................................................................................................................................................... 19 3 15 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGTTTCGTGCTTGACT................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
..........GTCGTTGTCGCCGCCCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................GAGCAACTTTTGACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
...............................................TTGGTTCGTCTCTGTATAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................ATTGTAAGCAGTAGTAGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................................ACTCGGCGTCACAAGA.................................................................................................................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

ACAGCGGCAGCAGCAACAGCAGCGGCAGCATCAACAGCAACAGCAACAACCAGACAGAGACATAACAACGGTGATTTCTTTCCGTTCTCCTTGGCTTTTACGGTGCTTTCTTTTACACCTCGCACTTACACTGTTAACAAGTCGCAATCGTTGAAAACTGGGGCACGCGTTAGTCCAGTGGTAACAAGGTACCATTTGTCACCATCGGGTTTCTTGTCGCTTACACACGACGACTAAACACTAACTTTTACGCATTAGGAGCAAGGCAACAGTAGCACAAGTGGCGCATTGGACTTGGAACTCATTTGTGTGTGTCCGCGTTGAGCCTGTGAATGTTTGTGTATGTGCGAGTGTTTGCCCTCGTGCGTTGAGATGCAGTGTTCTTGACCTTTCTCCACACCCCGCCACCCCCCTCTCCGAATCTTCACTTCTCCGGGGTTGGCTTTATGGACTTTTAACATTGAGTTGATGTAAATTAACTAGAGGTTCTCTTCCACCCCCCTTCCCAGGGTCGTTCCACCAAGAATATTTAGAAAAATATACCACGGAGGATTTTTTAGCAAAGCACGATCCGTGTTCTTCAACCGAGACGAGATCGGGTGAGTGAGTGAGGAAACCCTCCAGGAAACGGCGTATTAAAGCTAACCTCGACCGTGAG
********************************************************************************************************************************************************************************************************************************************************************.....((((((..((.(((.........(((.(((((((((........))))))))).))).........)))..((((((((.(((.(((((((.((...(((.((.......((((.(((((...((((.....))))...((((.....((......))....)))).)))))..))))........)).)))...)).)))))))))).))))))))..(((........)))...))..)))))).************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 M053
female body
...........................................................................................................................................................................................................................................................GCATTATGAGCAAGGGAACCG.................................................................................................................................................................................................................................................................................................................................................................................................. 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTTTATGGACTTTTAACATTGAGT................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................TTACGCATTAGGAGCAAGGCAACAGT................................................................................................................................................................................................................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................TTACACTGTTAACAAGTCGCAATCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TTGTCGCTTACACACGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................TGGAATTGGAACTCATTTGTGT........................................................................................................................................................................................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................TGTTTGTGTATGTGCGA.................................................................................................................................................................................................................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CAGTGGTAACAAGTTTCGATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 21 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTTTTAACTTTGAGTTGAT............................................................................................................................................................................................ 23 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.......................GCCAGCATCAACAGCAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 19 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................GAATGTTTGTGTATGT........................................................................................................................................................................................................................................................................................................................ 16 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AGTTTGTCCAGTGGTAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 17 2 17 0.24 4 0 4 0 0 0 0 0 0 0 0
........................GGAGTATCAACAGTAACAGCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 22 3 6 0.17 1 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................................................................................................AGCAAAATTGGCGCAT................................................................................................................................................................................................................................................................................................................................................................................. 16 2 20 0.15 3 0 3 0 0 0 0 0 0 0 0
.................TGCAGCGGCAGGATCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 17 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................GATGGGCCTGTGAATG................................................................................................................................................................................................................................................................................................................................... 16 2 19 0.11 2 0 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGGGGTTGGATGTAA.................................................................................................................................................................................................................. 18 3 20 0.10 2 0 0 0 0 0 0 0 0 2 0
.......................................................................................................................................................................................AGAAGGTACAATTTGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 17 2 14 0.07 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGAAAATTCAGAAAA......................................................................................................................... 18 2 18 0.06 1 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................ACACTGTTAACACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 15 1 19 0.05 1 0 0 0 0 0 0 0 1 0 0
......GCAGCAGCAACACCAGCGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 19 2 19 0.05 1 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGACGTTCCGCCAA....................................................................................................................................... 16 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CCAGTTGTAACGAGGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:4148704-4149361 + dsi_28335 T---GTCGC---CGT---C---GTCGTTGTC---GT---CGCCG------------------------------------------------------------TCGT------AGTTGTCGTTGTCGTT------GTTGG---------T---------CTGT-------------------------------------------------C------------------------------TCTG----------------------------TATTGTTGCCACTAA-AGA-A----------AGGCAA-------GAGGAA-CCGAAAATGCCACGAAAGAAA--ATGTGGAGCGT------GAATGTG-ACA--------ATTG-------------TTCAGCGTTA-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGT-----T---C---CATGGTAAACAGTG---GTAGCCCA--------------------------------------------------------------------------------------------------------AA-----------GAA---CAGCGAATGTG-TGC---------------TGC-T--GAT----------TTGTGATTG-AAAATGCGTAATCCTCGTTC-------CGTTGTCATCGTGTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAA-CTCGGACACTTACAAACAC--------------ATACACG----CT----------CACA-------------AA-CGGGAGCACGCAACTCTACGTCACAAGAACTGGAAA--GAGGTGT--GGGGCGG------------TG------GGGG-GAGAGGCTTAGAAG-------TGA---------------------------------------------AGAGG-------------------------------------------------------------------------CCCCAACCGAAA--TACCTGAAAAT-----------TGTAACTCAACTACATTTAATTGATCTCCAAGAGAAGGTG----GGGGGAAGGGTCCCAGCAAGGTGGTTCT-TAT-AAATCTTTTTAT--ATGGTGCCTC----CTAAAAAATCGTTTCGTGCTAGGCAC-------AAGAAGTTGGC--------TCTGCTC------------TAGCCCACTCACT-------------------C--------ACTCC---------------------TTTG-------GGAGG--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGATTGGAGCTGGCA-----C------TC
droSec2 scaffold_2:4181237-4181894 + T---GTCGC---CGT---C---GTCGTTGTC---GT---CGCCG------------------------------------------------------------TCGT------AGTTGTCGTTTTCGTT------GTTGG---------T---------CTGT-------------------------------------------------C------------------------------TCTG----------------------------TATTGTTGCCACTAA-AGA-A----------AGGCAA-------GAGGAA-CCGAAAATGCCACGAAAGAAA--ATGTGGAGCGT------GAATGTG-ACA--------ATTG-------------TTCAGCGTTA-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGT-----T---C---CATGGTAAACAGTG---GTAGCCCA--------------------------------------------------------------------------------------------------------AA-----------GAA---CAGCGAATGTG-TGC---------------TGG-T--GAT----------TTGTGATTG-AAAATGCGTAATCCTCGTTC-------CGTTGTCATCGTGTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAA-CTCGGACACTTACAAACAC--------------ATACAAG----CT----------CACA-------------AA-CGGGAGCACGCAACTCTACGTCACAAGAACTGGAAA--GAGGTGT--GGGGCGG------------TG------GGGG-GAGAGGCTTAGAAG-------TGA---------------------------------------------AGAGG-------------------------------------------------------------------------CCCCAACCGAAA--TACCTGAAAAT-----------TGTAACTCAACTACATTTAATTGATCTAAAAGAGAAGGTG----GGGGGCAGGTTTCCAGCAACGTGGTTCT-TAT-AAATCTTTTTAT--ATGGTGCCTC----CTAAAAAATCGTTTCGTGCTAGGCAC-------AAGAAGTTGGC--------TCTGCTC------------TAGCCCACTCACT-------------------C--------ACTCC---------------------TTTG-------GGAGG--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGATTGGAGCTGGCA-----C------TC
dm3 chr3L:4188587-4189233 + T---GTCGC---CGT---C---GTCGTTGTC---GT--TCGCCG------------------------------------------------------------TCGT------AGTTGTCGTTG-----------GTTTG---------T---------CTGT-------------------------------------------------C------------------------------TCTG----------------------------TATTGTTGCCACTAA-AGA-A----------AGGCAA-------GAGGAA-CCGAAAATGCCACGAAAGAAA--ATGTGGAGCGT------GAATGTG-ACA--------ATTG-------------TTCAGCGTTA-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGT-----T---C---CATGGTAAACAGTG---GTAGCCCA--------------------------------------------------------------------------------------------------------AA-----------GAA---CAGCAAATGTG-TGC---------------TGG-T--GAT----------TTGTGATTG-AAAATGCGTAATCCTCGTTC-------CGTTGTCATCGTGTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAA--GCGCAA-CTCGGACACTTACAAACAC--------------ATACCAG----CT----------CACA-------------AA-CGGGAGCACGCAACTCTACGTCACAAGAACTGGAAA--GAGGTGT--GGGGG------------------------GA-GGGAGGCTTAGAAG-------TGG---------------------------------------------AGAGG-------------------------------------------------------------------------CCCCAACCGAAA--TACCTGAAAAT-----------TGTAACTCAACTACATTTAATTGATCTCCAAGAGAAGGTG----GGGG-CAGGTTCCCAGCAAGGTGGTTCT-TAT-AAATCTTTTTAT--ATGGTGCCTC----CTAAAAAATCGTTTCGTGCTAGGCAC-------AAGAAGTTGGC--------TCTGCTC------------TTGCCCACTCACT-------------------C--------ACTCC---------------------TTTG-------GGAGG--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGATTGGAGCTGGCA-----C------TC
droEre2 scaffold_4784:6899360-6900027 + T---GTCGC---CGT---C---GTTGTCGTCGCC---GTCGCCG------------------------------------------------------------TAGT------AGTTGTCGTTGTCGTTGTCGTTGTTGG---------T---------CTGT-------------------------------------------------C------------------------------ACTG----------------------------TATTGTTGCCACCAA-AGA-A----------AGGCAA-------GAGGAA-CCGAAAATGCCACGAAAGAAA--ATGTGGAGCGT------GAATGTG-ACA--------ATTG-------------TTCAGCGCTA-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGTTCCGTT---C---CATGGTAAACAGTG---GTTGCCCA--------------------------------------------------------------------------------------------------------AA-----------GAA---CAGCAAATGTG-TGC---------------TGG-T--GAT----------TTGTGATTG-AAAATGCGTAATCCTCGTTC-------CGTTGTCATCGTGTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAA-CTCGGACACTTACAAACAC--------------ATACAAA----CT----------CACA-------------AA-CGGGAGCACGCAACTCTACGTCACAAGAACTTGAAA--GAGATGT--GTGGGGG------------GC------AGG-GG-AGGGCTTAGAAG-------TGG---------------------------------------------AGAGG-------------------------------------------------------------------------CCCCAACCGAAA--TACCTGAAAAT-----------TGTAGTTCAACTACATTTAATTGATCTCCAAGAGGTGGGG------G--------CCCAGCAAGGTGGTTCT-TGT-AAATCTTTTTAT--ATGGTGCCTC----CTAAAAAATCGTTTCGTGCTAGGCACAAGGCACAAGAAGTGGGC--------TCTGCTC------------TAGCCCACTCACT-------------------C--------ACTCC---------------------TTTG-------GGAGG--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGATTGGAGCTGGCA-----C------TC
droYak3 3L:4760649-4761301 + T---GTCGC---CGT---C---GTTGTCGTCGCC---GTCGCCA------------------------------------------------------------TCGT------AGTTGTCGTGGTCGTT------GTTGG---------T---------CTGT-------------------------------------------------C------------------------------ACTG----------------------------TATTGTTGCCAGCAA-AGA-A----------AGGCAA-------GAGGAA-CCGAAAATGCCACGAAAGAAA--ATGTGGAGCGT------GAATGTG-ACA--------ATTG-------------TTCAGCGTTA-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGT-----T---C---CATGGTAAACAGTG---CTTGCCCA--------------------------------------------------------------------------------------------------------AA-----------GAGCAGCAGCAAATGTG-TGC---------------TGG-T--GAT----------TTGTGATTG-AAAATGCGTAATCCTCGTTC-------CGTTGTCATCGTGTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAA-CTCGGACACTTACAAACAC--------------ATACAAG----CT----------CACA-------------AA-CGGGAGCACGCAACTCTACGTCACAAGAACTAGAAA--CGGGTGT--GTGGGGG------------GG--------TG-GAGGGGCTTTGAAG-------TGG---------------------------------------------AGAGG-------------------------------------------------------------------------CCCCAACCGAAA--TACCTGAAAAT-----------TGTAGTTCAACTACATTTAATTGATCTCCCAGAGGTGGGG------G-------ACCCAGCCAGGTGGTTCT-TAT-AAATCTTGTTAT--ATGGTGCCCC----CTAAAAAATCGTTTCGTGCTAGGCAC-------AAGAAGTTGGC--------TTTGCTC------------TAGCCCACTCACT-------------------C--------ACTCC---------------------TTTG-------GGAGG--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGATTGGAGCTGGCA-----C------TC
droEug1 scf7180000409466:1954086-1954724 + T---GTCGC---CGT---C---GTTGCCGTC---GCCATCGCCA------------------------------------------------------------TCGCTGTCGTAGTTGTCGTTG------------TCGC---------T---------CTAT---------------------------------------------------------------------------------CTC----------------------------TATTGTTGCCACCAA-AGA-A----------ACGCAAGAA------------CAAAAATGCCTCGAAAGAAA--ATGTGGAGCGT------GAATGTG-ACG--------ATTG-------------TTCAGCGTTA-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGT-----T---C---CATGGTAAACAGTG---GTAGCC-------------------------------------A--------------------------------------------------------------------AA-----------ATA---CAGCAAAT--G-TGC---------------TGG-T--GAT----------TTGTGATTG-AAAATGCGTAATCCCCGTTC-------CGTTGTCATCGTGTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAA-GTCGAACACTAACACACAC--------------ACACTCT----CACATATAAAAACACA-------------AA-CGGGAGCACGCAACTCTACGTCACAAGAGTTTGAAG--GAGGTGG--ACAAGGG------------AA------GAA-GG-GGTGC--TGAAG-----AGTG-------------------------------------------------TC-------------------------------------------------------------------------CCCAAACCAAAA--TACCTGAAAAT-----------TGTAGTTCAACTACATTTAATTGATCTTAAAAGAACTGAG------GG--------------TAGGGGTTCT-TAC-AAATCTTTATA----TAGAGCCAC----CTAAAAAATCGTTTCGTGCTAGGCAC-------AAGAAGTTGGC--------TCTACTG------------TATCCCACTCGCT-------------------C--------ACTCC---------------------TTTG-------GGAGG--------------------------------------------------------------------TTCTTTGCCGCATAATTTCGATTGGAGCTGGCT-----C------TC
droBia1 scf7180000302428:896231-896922 + T---GTCGC---CGT---C---GCCGTCGTCGCC---TTAGCCG------------------------------------------------------------TCGT------GGTTGTCGTTGTCGTT------GTCGC---------T---------CCGC-------------------------------------------------C------------------------------TCTGTG--------------------------TGTGGTGGCCACCGAAAAG-A----------AGGCAAGCAGCCAGAGGAG-CCAAAAATGCCACGAAAG-AA--ATGTGGAGCGT------GAATGTG-GCG--------ATTG-------------TTCAGTGCTA-GCTAACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGTTCT--TGTGC---CATGGTAAACAGTG---TG-GCT---GGCCCCCGTC--------GAAATGTGCGAAATGTG--------------------------------------------------------------------AA-----------ATA---CAGCAAACGCGCTGC---------------TGG-T--GAT----------TTGTGATTG-AAAATGCGTAACCCCCGTTC-------CCTTGTCATCGTGCT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAA-GTCGGACACTCACACACTC--------------ACCTAGG----GG----CA----CTCT-------------AA-CGGGAGCACGCAACTCTACGTCACAAGAGCTAGAGA--GGGGCGT--GGGAA------------------------AA-GGGGTATTGACTTG-------AGG---------------------------------------------AGCGA------------------------------------------------------------------------CCCCAAACCAAAA--TACCTGAAAAT-----------TGTAGTTCAACTACATTTAATTGATCTCCAAATAAAAAAGGTTTAGG-----------GGCGGGGGGGCTCC-TAC-AAATCTTTATA----TAGGGCCTA----CTGAAAAATCGTTTCGTGCTAGGCAC-------AAGAAGTTGGC--------TCCACTC------------TAGCCCACTCACT-------------------C--------ACTCC---------------------CTCGAGA----GGAGG--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGAT-GGAGCTGGCT-----C------TC
droTak1 scf7180000415707:35665-36322 - T---GTCGC---CGT---C---GTAGT------------------------------------------------------------------------------------------TGTCGTTGTCGTT------GTTGTCGTTGTCGCTCTG-----TGTCT-------------------------------------------------C------------------------------TGTG----------------------------TATTGTGGCCACCGAAACA-A-------GAAACGCCA-------GAGGAACCCAAAAATGCCACGAAAGAAG--ATGTGGAGCGT---TGTGAATGTTGAGGCGATTGTTCTTG-------------TTCAGTGCTA-GC-TACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGTTCT--TGTGCCATCATGGTAAACAGTG---TG--TTA------------------------------------G--------------------------------------------------------------------AA-----------ATA---TAGCAAGT--G-TGC---------------TGCTT--GAA----------TTGTGATTG-AAAATGCGTAATCCCCGTTC-------CGTTGTCATCGTGTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAA-GTCGGACACTCACACACAT--------------AGGCACA----CT----------CACA-------------AA-CGGGAGCACGCAACTCTACGTCACAAGAGCTTGAAA--GGGGTGG------TGG------------GG------GAA-GG-GGGGT--TGGAG---------A---------------------------------------------ATGTC-------------------------------------------------------------------------CCCAAACCAAAA--TACCTGAAAAT-----------TGTAGTTCAACTACATTTAATTGATCTTGGAAAAACGTAT------GG--------------GAGGGGTTCT-TACAAAATCTTTATAT--ATGGGGCCTC----CTAAAAAATCGTTTCGTGCTAGGCAC-------AAGAAGTTGGC--------TCCACTC------------TAGCCCACTCACT-------------------C--------ACTCC---------------------TTTGAGA-GGCGGAGG--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGATTGGAGCTGGCT-----C------TC
droEle1 scf7180000491249:5052937-5053579 + TGTTGTCGC---CGT---C---GCCGTTGTC---GT---TGT-------CGTTGCC-TTT---------GTCG-------------------------------TCGT------AGTTGTCGTTATCGTG------GTCGT---TGTCGCCCTG-------------------------------------------------------------------------------------------CTC----------------------------TATTGTTGCCACCAA-AAAAAAAAAGAAGAAACGCAAGAGAC-----GAA-CAAAAAATGCCACGAAAGAAA--ATGTGGAGCGT------GAATGTG-GCG--------ATTG-------------TTCAGCATTA-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGT-----T---C---CATGGTAAACAGTG---GTAAACCGA-ATGAAAACCA----------------AAAAACCG--------------------------------------------------------------------AA-----------AAA---CGGCAAATGTG-TGC---------------TGG-T--GAT----------TTGTGATTG-AAAATGCGTAATCCCCGTTC-------CGTTGTCATCGTGTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACACAAACGCAA-GTCGAA-------------------------------------------------------------------AA-GGGGAGCACGCAACTCTACGTCACAAGAGCTTAATA--GAAAGACGGGTAGGGT------------GA----------------------------------G---------------------------------------------AGGGG-------------------------------------------------------------------------CCCCTACAAAAA--TACCTTTAAAC--T------ACTGTAGTTCAACTACATTTAATTGATCTCCAAAAAGGGGGA---------------------------------GAG-AAATCTTTATT----GAGGACCTCCCAAAAAAAAAATTGTTTCGTGCATGGCAC-------AAGAAGTTGGC--------TCTACTC------------TAGCCCACTCACT-------------------C--------ACTCC---------------------TTTG-------AGAGC--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGATTGGAGCTGGCT-----C------TC
droRho1 scf7180000766748:12701-13297 - T---GTCGC---CGT---C---GCCGTTGTC---GT---TGC-------------C-TTT---------GTCG-------------------------------TCGT------AGTTGTCGTTGTCGTT------GTCGC---------CCTG-------------------------------------------------------------------------------------------CTC----------------------------TATTGTTGCCACCAA-AAA-A-------GAAACGCAAGAAAC------GA-ACTAAAATGCCACGAAAGAAA--ATGTGGAGCGT------GAATGTG-GCG--------ATTG-------------TTCAGCGTTA-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGT-----T---C---CATGGTAAACAGTG---GTAAACCG--------------------A-ATAACCGAAAACCG--------------------------------------------------------------------AG-----------AAA---CAGCAAAT--G-TGC---------------TGG-T--GAT----------TTGTGATTT-AAAATGCGTAATCCTCGTTC-------CGTTGTCATCGTGTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAA-GTCGAA-------------------------------------------------------------------AA-GGGGAGCACGCAACTCTACGTCACAAGAGCTTCATA--GAAAGGGGAGTGGG----------------------------------------G-------------------------------------------------------AATGG-------------------------------------------------------------------------CCCCAACCAAAA--TACCTAAAATC--T------ACTGTAGTTCAACTACATTTAATTGATCCCGAAAAGGGGAGA---------------------------------GAG-AAATCTTTATA----GAGGACCTC-----CCAAAAATCGTTTCGTGCAAGGCAC-------AAGAAGTTGGC--------TCTACTC------------TAGCCCACTCACT-------------------C--------ACTCC---------------------TTTG-------AGAGG--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGATTGGAGCTGG----------------
droFic1 scf7180000454113:1420219-1420816 + T---GTCGC---CGT---C---GTTGCCGTT---GT------------------------------------------------------------------------------------------------------CGC---------TCTG-------------------------------------------------------------------------------------------CTC----------------------------TATTGTTGCCACCAAGACA-A-------GAAACGCAAGAAGT---------TCAAAAATGCCACGAAAAAAATTATGTGGAGCGT------GAATGTG-GCA--------CTCA-------------TTTAGCGTTA-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGT-----T---C---CACTGTAAACAGTG---GTAACCCG--------------------A------------------AATAAA-----------------------------------------------------------AA-----------ATA---AAGCAAA--TG-TGC---------------TGG-T--GAT----------TTGTGATTG-AAAATGCGTAATCCTCGTTC-------CGTTGTCATCGTGTTTCACCGCGTAACCTGAACCTTGAGTAAACACACACACAGTCGCAA-GTCGACCACACACACACAC--------------ACACACA----CT----------CACAGACGTA------AAA-GGGGAGCACGCAACTCTACGTCACAAGAGCCTCAAA--AAGGA-----TGGGGT------------A---------------------CAAAG-------T------------------------------------------------GGGT-------------------------------------------------------------------------CCCACACCACAG--CACCTGAGAAATAT------ATTGTAGCTCAACTACATTTAATTGATCTCCAAAAAAAGGGG------GC-------------------------GAG-AAATCTTTCC-------------A----CTAAAAAATCGTTTCGTGCTTGGCAC-------AAGAAGTG-GC--------TCTTTTC------------TAGCCCACTCACT-------------------C--------ACTCC---------------------TTCTTCG----GGTGG--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGATTGGAGCTGGCA-----T------TC
droKik1 scf7180000302383:573335-574011 + T---GTCGT---CGC---C-------------------------------------------------------------------------------------TCGT------AGCTGCCGTTGTCGCT------GTCGT---TGTCGCT--G-------------------------------------------------------------------------------------------CTC----------------------------CATTGTTGCCACCAA-GG--A----------ACGCAAGAGGCAAAA---A-GACAAAATGCCACGAAAG-AA--ATGTGGAGCGT------GAATGTG-ACGTTT--TTGTTCT-------------TTCAGCGTTT-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGTCCT--T---C---CATGGTAAACAGTG---TA-ACC----------------------------------------------------------------------------------------------------------GA-----------AAA---CGGGAACTGTG-CGGGATTCG---GATTC----GG--GAT----------GTGTGATTG-AAAATGCGTAATCCTCGTTC-------CGTTGTCACC--GTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAA-GTCACACACTCACACACGC--------------ACACTAT----CG----------CGAC-------A-CACTAA-CGGGAGCACGCAACTCTACGTCACAAGAGCTCGAAG--GAGGAGA--GTGAAAG------------AG------AAA-GG-GGAGCAGAAGGG-------TGGCCT------------------------------------------GGTAG-------------------------------------------------------------------------CCCAAACAAAAA--TACATGAAAAA-----------CGTAGTTGGACTACATTTAATTGATCTCCAAAATCCTGGG------GC--------------AGGGGAGCCT-AAC-AAATCTTT---------GGGCCAG----CTGAAAAATCGTTTCGTGCAAAGCAC-------AAGAAGTTGCCAAG--------GCACTCACAC------CAACTTACTC---CGTCTC-------------------CTCACTCC---------------------TTCG-------AGGGA--------------GCGCAAGAGGGATAGGGCTAGG--------------------------GTGGCCGCCTATGCCGCATAATTTCGATTGGAGCAGGC---------------
droAna3 scaffold_13337:14609858-14610598 + T---GTCGT---TGT---------------------------------------------------------------------------------------------------------------CGTT------GTCGCTGT---CTCCTTC--G-------------------------------------------------------------------------------------------TGGCTCGTCGCTGTCGCTGTCGCTGGCCTATTGT------CA--AAG-A----------ACACAAGAAGTTCTG---C-CACAAAATGCCACGAAAGAAA---TGTGGACCGT------GATTGT---------------TT-------------TTCAGCGTTT-----------------------GCAATCAGGTCACC-A---TTGT-----C---C---CACGGTAAACACACGCTGGGAACTGC-TGGGTCCTTAAAAACCCGA--TGTCCGATGTCCT--------------------------------------------------------------------GA-----------AAA---CTGAAACTGTG-CGGGCCGTGT----------G-T--GAT----------TTGTGATTG-AAAATGCGTAATCCCCGTTC-------CGTTGTCACC--GTT-CACCGCGTAACCTGAACCTTGAGTAAATACACACAG--GCGCAAAGTCGCAAACACACACATACACACATACACACATACACACACTCTCA----------CACA-------------AA-CAGGAGCACGCAACTCTACGTCACTAGAGCTGAATA--TGCGGGGGGATGGGTTGAGGGTTAAGGGAG------AAG-GA-GAAAG--CAAAG-------------------------------------------------------AAGGG-------------------------------------------------------------------------CCAC----AAAC--TACATGAAAAATTAAGTTGAAATGTAGTGGAACTACATTTAATTGATCTCGGGGCAATAGGG----------------------------CCCAAAAC-AAATCTTCAA-------AAGGCAA----CTGAAAAATCGTTTCGTGCAAAGCAC-------AAGAAGTTGCCAAG--------GCACTCACACAC----CAACCAACTC---GGTCGCCAGCTCGCTCACTC--------ACTCC---------------------TTTATAG----AAA------GGAGCAGGGAGCGGGAGCGGG-------AGCAGG----------------AGCAGTAGAGGACCGTCTATGCCGCATAATTTCGATTGGAGCAAGCTCCCCAC------TC
droBip1 scf7180000396641:700963-701687 - T---GTCGT---TGT---------------------------------------------------------------------------------------------------------------CGTT------GTCGCTGT---CTCCTTC--G-------------------------------------------------------------------------------------------TGGCT-------GTCGCTGTCGCTGGTCTATTGT------CAA-AAG-A----------ACACAAGAAGTTCTG---C-CACAAAATGCCACGAAAGAAA---TGTGGACCGT------GATTGT---------------TT-------------TTCAGCGTTT-T---------------------GCAATCAGGTCACC-A---TTGT-----C---C---CACGGTAAACACACACGGTAGCTT--GGCCAAAACC--------GATGTTGGCCAAAGCCT--------------------------------------------------------------------GA-----------AAA---CTGAAACTGTG-CGGGCCGTGT----------G-T--GAT----------TTGTGATTG-AAAATGCGTAATCCCCGTTC-------CGTTGTCACC--GTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAAAGTCGCAAACACACACACAC--------------ACACACG----CT----CACATTCACG-------------AA-CGGGAGCACGCAACTCTACGTCACTAGAGCTGAATA--GGCGGGG--ACGGGTT-------AAGGGAGGAGGACGAG-GA-GGAGCAACGAAG-------GGTCAC------------------------------------------AGTGG-------------------------------------------------------------------------CGCAAACCAAAAAATACATGAAAAATTTAGTTGAAATGTAGTGGAACTACATTTAATTGATCTCGGGGCCCCC-----------------------------CCCCCT-AAC-AAATCTTTA--------GAGGCAG----CTGAAAAATCGTTTCGTGCAAAGCAC-------AAGAAGTTGCCAAGAGGC----GCACTCACACCA----CAACCAACTC---GGTCGCTAGCTCGCTCACTCACTCACTCACTCC---------------------TTGA-------AAAAAAAATAAAGGAG----CGGGAGCGGT-------AGCAGGAG----------------------AGGACCGTCTATGCCGCATAATTTCGATTGGAGCAAGCT-----C------CC
dp5 XR_group8:8353636-8354471 + T---GTCGT---CGC---C---GTCGTCGTC---GC---TGC--TCCTCTATTGTCGTTT---------GTCGCCACAGCCATAGCCACAACCATTGCCATAGC----------CA---------------------TCGCCA---TCGCCTCTTCTTGTCCGTTGTTTCGCT-AAGGCTCCTCCTG---------------------------------------------------------------------------------------------------------------------------------------------CGATAATGGCAAGAAAGAA---ATTTGGAACGC------GAACGTG-AATGGT--T--TTTT-----------TTTTGTGTGTTTTGC-AACTTTTGACCCCGTGCGCGCAATCAGGTCATA-AAAATTGT-----T--------------------------AACTCT--------------------A----------------AAAGTATGAAATGAGACGAGGAGCTATGGCCATGCCTATGCCCATGCCCACTCTCTGTTGACTACGGGTAAACACTGGGAAAA---CTGTGACTGTG-TGGTACC-GTTCGGTGC----GGGGGGTTTTCCTTTCCGTGTGATTG-AAAATGCGTAATCGTT--CCTGTCGTCCGTTG---CC--GTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACACAGACTCAAAATCTGTAACACACACACAC--------------------------C----------CACA------CACAGCCAG-TAGCAGCACGCAACTCTACGTCACTCAATCAGAAGC--GAGGGGG--GTGGTGT------------CG------GAAA-GAGACACATGCCAG-------TGTGGT------------------------------------------TTTCC-------------------------------------------------------------------------CCACAATAGAAA--TACAAGAAATT--T------G-TGTGCTCCAACTACATTTAATTGATCTGCCTCTA-------------------------------------T-GGG-AAATCTTTTTAGTGGCGGAGGCAG----CTGAAAAATCGTTTCGTGCAAAGCAC-------AAGAAGTTGCCAAGGAGGCAGTAGTC------------CTCCTCATACTCT-------------------C--------AATCCTTCAGCCGTTGCCA---------GA-GTGT------AGGGTAAGGTAGGGTATGGG-----T-------TAAGGGGTCTGGCAGTCGTCGTCGCCGCCGCCGCCTATATATGCCGCATAATTTCGATTGGAGCTGGCA-----G------GC
droPer2 scaffold_40:545223-546060 + T---GTCGT---CGC---C---GTCGTCGTC---GC---TGC--TCCTCTATTGTCGTTT---------GTCGCCACAGCCATAGCCACAACCATTGCCATAGC----------CA---------------------TCGCCA---TCGCCTCTTCTTGTCCGTTGTTTCGCT-AAGGCTCCTCCTG---------------------------------------------------------------------------------------------------------------------------------------------CGATAATGGCAAGAAAGAA---ATTTGGAACGC------GAACGTG-AATGGT--T--T-TT----------TT-TTGTGTGTTTTGC-AACTTTTGACCCCGTGCGCGCAATCAGGTCATA-AAAATTGT-----T--------------------------AACTCT--------------------A----------------AAAGTATGAAATGAGACGAGGAGCTATGGCCATGCCTATGCCCATGCCCACTCTCTGTTGACTACGGGTAAACACTGGGAAAA---CTGTGACTGTG-TGGTACG-GTGCGGTGCG---GGGGGGTTTTCCTTTCCGTGTGATTG-AAAATGCGTAATCGTT--CCTGTCGTCCGTTG---CC--GTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACACAGACTCAAAATCTGTAACACACACACAC--------------AC----------C----------CACA------CACAGCCAG-TAGCAGCACGCAACTCTACGTCACTCAATCAGAAGC--GAGGGGG--GTGGTGT------------CG------GAAA-GAGACACATGCTAG-------TGTGGT------------------------------------------TTTCC-------------------------------------------------------------------------CCACAATAGAAA--TACAAGAAATT--T------G-TGTGCTCCAACTACATTTAATTGATCTGCCTCTA-------------------------------------T-GGG-AAATCTTTTTAGTGGCGGAGGCAG----CTGAAAAATCGTTTCGTGCAAAGCAC-------AAGAAGTTGCCAAGGAGGCATTAGTC------------CTCCTCATACTCT-------------------C--------AATCCTTCAGCCGTTGCCA---------GA-GTGT------AGGGTAAGGTAGGGTATGGG-----T-------TGAGGGGTCTGGCAGTCGTCGTCGCCGCCGCCGCCTATATATGCCGCATAATTTCGATTGGAGCTGGCA-----G------GC
droWil2 scf2_1100000004510:773087-773208 + C---GTCGT---CGC---CGTCGTTGTCGTT---GTCGTCGTCA------------------------------------------------------------TCGT------CATCATCGTTG---------------------------------------------------------------------------------------------------------------------------------------------------------TCGTTGCCGGCAA-----------------------------CAGGAG---GAACACGCAAAATAAAAAA--ACAAGGAACAA------GAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAA-----------------------------------------------------------------------TGTGCCCCCTGTTATACGTT
droVir3 scaffold_13049:2065570-2065911 + C---GTCGT---CGT---C---GCCGTTCGC---CT--GCG----------------TCCGCCA----------------------------------------T--T------TA---------------------TTGCCG---TCGCCTCT--TTGTCGGTCG----GTC-GAGGCTC---CAGCGAAAATGACAAAATGTGAATATGCTCTGTGTATGTGTGTCTCCGTGTGACTCCGTCTC------------------------------------------------------------------------------------------------------------TGTGTGTGTT----------GTTTTCATTTTCCTTTTTTTTTTTTT---TTTTGTATTT-TG-AACTTTTGACCC-GTAC--GCAATCAGGTCATT-TAAATG-------------------------------------------------------------------------TTGAAACATTGTAAATGAGCCAGGTTTCAG-----------------------------TTTTGTTTGCCGTT-----------AAA---CAACTTTT--G-TGC---------------T-----------------------GATTGAAAAATGCGTAATC------------------------------------GTAGCCTGAACCTTGAGTAAACACACACAC--ACACA------------------CAC--------------ATGCACA----CA----------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_4729:2916-3187 + T---GTCTC---TGC---C---ATT-----------------------------------------------------------------------------------------TA---------------------TTGCTG---TCGCCTCT--TTGTCGGTCG----GTCCGAGGCTC---TAG-----------------------------------------------------------------------------------------------------CGA--AA-A----------TGACAA-------AA---A-GTGAATATGCTTGAGTATTCG--TGTTTGTGTGTGTTTGTGTG-----CGTTGT--TTTCTTT-------------TTTTGTATTT-TG-AACTTTTGACCCG-TACGCGCAATCAGGTCATTAAAAATTGT-----T---T--------------------------C------------------------------------GAAATACTGTAAATGAGCTCAGGTT-------------------------------------------------------------------------------CCGTTT---------GT-T--TTC----------TGCTGATTG-AAAATGCGTAAC------------------------------------CGTAACCTGAACCTTGAGTAAACAGCTACAC--ACGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:3116980-3117733 + T---GCTGCCGCCGTCGTC---GCCGTT------------ACCG----------TCGTTTGTTGCCGTTGCCG-------------------------------TCGC------AGTTGTCGTCGC------------------------CTGT--TTGTCGGTCG----GTT-TAGGCTC---CAG-----------------------------------------------------------------------------------------------------CG--------------------------------------GAAAAATGAC-------AAA--ATGTGGATATT----GTGATT-T--AGCTTC--TTATTTT-------------TTTTATATTT-TG-AACTTTTGACCC-GTAC--GCAATCAGGTCATA-ACAAAAAA-----G--------------------------AATT-----------GTT-------TA----------------ACACTGTAAAATGAGCCAAGTAATTT-----------------------------TGTTGTTTGTTG----TTGCTGTTGAAA---CTTTTTTTGTG-CAA----------------------GTC----------TTCTGATTG-AAAATGCGTAAT------------------------------------CGTAACCTGAACCTTGAGTAAACACACACAC--ACACAC-ATAACAGTTGTATAGATAT--------------GTGTGTG----AG----TG----TGTG--TGTG-------TGTGGCTAGCACGCAACTCGACGTCACAGGACCACCCGTCAAAGAGA---ATGAG---------------A------GAGG-GAGAGACGGAGAAGTTAAATGTGTTGCCAGCAACAACAACAGCAACAACAACGTCATATTGCCCATGTTTTAATACAAAACAGAATCAAATTTAAAGTGTTTGCCAAGCACCCCCCAACCCAACCGCCCCTTAGCAGCCCCCAGCACCCCAAACCATTT--T---TAAATAT---------TTCCCCGTTTGGCTCCATTGAATCA-----CAAA------------------------------------------------------------AAAAGGCAA----ATGAAAAATCGTTTCGTGCAAAGCAC-------GAGAAGTCGTCAAGGCACCCCCTTGA-----CACCTCATACCCCACTC----------------------------------CCCATACCCACTTCACAGACCCCTTTTTTG----TGTGC--------------------------------------------------------------------CCCTATGCCGCATTATTTCGTTTTT-----GCC-----T------CC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
T---GTCGC---CGT---C---GTCGTTGTC---GT---CGCCG------------------------------------------------------------TCGT------AGTTGTCGTTGTCGTT------GTTGG---------T---------CTGT-------------------------------------------------C------------------------------TCTG----------------------------TATTGTTGCCACTAA-AGA-A----------AGGCAA-------GAGGAA-CCGAAAATGCCACGAAAGAAA--ATGTGGAGCGT------GAATGTG-ACA--------ATTG-------------TTCAGCGTTA-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGT-----T---C---CATGGTAAACAGTG---GTAGCCCA--------------------------------------------------------------------------------------------------------AA-----------GAA---CAGCGAATGTG-TGC---------------TGC-T--GAT----------TTGTGATTG-AAAATGCGTAATCCTCGTTC-------CGTTGTCATCGTGTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAA-CTCGGACACTTACAAACAC--------------ATACACG----CT----------CACA-------------AA-CGGGAGCACGCAACTCTACGTCACAAGAACTGGAAA--GAGGTGT--GGGGCGG------------TG------GGGG-GAGAGGCTTAGAAG-------TGA---------------------------------------------AGAGG-------------------------------------------------------------------------CCCCAACCGAAA--TACCTGAAAAT-----------TGTAACTCAACTACATTTAATTGATCTCCAAGAGAAGGTG----GGGGGAAGGGTCCCAGCAAGGTGGTTCT-TAT-AAATCTTTTTAT--ATGGTGCCTC----CTAAAAAATCGTTTCGTGCTAGGCAC-------AAGAAGTTGGC--------TCTGCTC------------TAGCCCACTCACT-------------------C--------ACTCC---------------------TTTG-------GGAGG--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGATTGGAGCTGGCA-----C------TCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTCACAAGAACTGGAAA--GAGGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TA-GC-AACTTTTGACCCCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC-------CGTTGTCATCGTGTT-CACCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200002000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATCGTTTCGTGCTAGGC.....................................................................................................................................................................................................................................................2112.00200000000000002000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--GGGGCGG------------TG------GGGG-GAGAGGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCATAATTTCGATTG.......................1911.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG--GCGCAA-CTCGGACACTTAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGTTGGC--------TCTGCTC------------TTT...................................................................................................................................................................................................2011.00100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAGAACTGGAAA--GAGGTGT--A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACGTCACAAGAACTGGAAA--GAGGTGT--.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GTTA-GC-AACTTTTGACCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
droSec2
T---GTCGC---CGT---C---GTCGTTGTC---GT---CGCCG------------------------------------------------------------TCGT------AGTTGTCGTTTTCGTT------GTTGG---------T---------CTGT-------------------------------------------------C------------------------------TCTG----------------------------TATTGTTGCCACTAA-AGA-A----------AGGCAA-------GAGGAA-CCGAAAATGCCACGAAAGAAA--ATGTGGAGCGT------GAATGTG-ACA--------ATTG-------------TTCAGCGTTA-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGT-----T---C---CATGGTAAACAGTG---GTAGCCCA--------------------------------------------------------------------------------------------------------AA-----------GAA---CAGCGAATGTG-TGC---------------TGG-T--GAT----------TTGTGATTG-AAAATGCGTAATCCTCGTTC-------CGTTGTCATCGTGTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAA-CTCGGACACTTACAAACAC--------------ATACAAG----CT----------CACA-------------AA-CGGGAGCACGCAACTCTACGTCACAAGAACTGGAAA--GAGGTGT--GGGGCGG------------TG------GGGG-GAGAGGCTTAGAAG-------TGA---------------------------------------------AGAGG-------------------------------------------------------------------------CCCCAACCGAAA--TACCTGAAAAT-----------TGTAACTCAACTACATTTAATTGATCTAAAAGAGAAGGTG----GGGGGCAGGTTTCCAGCAACGTGGTTCT-TAT-AAATCTTTTTAT--ATGGTGCCTC----CTAAAAAATCGTTTCGTGCTAGGCAC-------AAGAAGTTGGC--------TCTGCTC------------TAGCCCACTCACT-------------------C--------ACTCC---------------------TTTG-------GGAGG--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGATTGGAGCTGGCA-----C------TCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTC-------CGTTGTCATCGTGTT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200
dm3
T---GTCGC---CGT---C---GTCGTTGTC---GT--TCGCCG------------------------------------------------------------TCGT------AGTTGTCGTTG-----------GTTTG---------T---------CTGT-------------------------------------------------C------------------------------TCTG----------------------------TATTGTTGCCACTAA-AGA-A----------AGGCAA-------GAGGAA-CCGAAAATGCCACGAAAGAAA--ATGTGGAGCGT------GAATGTG-ACA--------ATTG-------------TTCAGCGTTA-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGT-----T---C---CATGGTAAACAGTG---GTAGCCCA--------------------------------------------------------------------------------------------------------AA-----------GAA---CAGCAAATGTG-TGC---------------TGG-T--GAT----------TTGTGATTG-AAAATGCGTAATCCTCGTTC-------CGTTGTCATCGTGTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAA--GCGCAA-CTCGGACACTTACAAACAC--------------ATACCAG----CT----------CACA-------------AA-CGGGAGCACGCAACTCTACGTCACAAGAACTGGAAA--GAGGTGT--GGGGG------------------------GA-GGGAGGCTTAGAAG-------TGG---------------------------------------------AGAGG-------------------------------------------------------------------------CCCCAACCGAAA--TACCTGAAAAT-----------TGTAACTCAACTACATTTAATTGATCTCCAAGAGAAGGTG----GGGG-CAGGTTCCCAGCAAGGTGGTTCT-TAT-AAATCTTTTTAT--ATGGTGCCTC----CTAAAAAATCGTTTCGTGCTAGGCAC-------AAGAAGTTGGC--------TCTGCTC------------TTGCCCACTCACT-------------------C--------ACTCC---------------------TTTG-------GGAGG--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGATTGGAGCTGGCA-----C------TCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGT--GGGGG------------------------GA-GGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000300000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTCTACGTCACAAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTCTACGTCACAAGAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------------GA-GGGAGGCTTAGAAG-------CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
........C---CGT---C---GTCGTTGTC---GT--TCGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGT--GGGGG------------------------GA-GGGAGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AA--ATGTGGAGCGT------GAATGTG-A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGGTCACC-A---TTGT-----T---C---CA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACA-------------AA-CGGGAGCACGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT--GGGGG------------------------GA-GGGAGGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGAGAAGGTG----GGGG-C....................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTCTACGTCACAAGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTTCGATTGGAGCTGGCA-----C------TC2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............GT---C---GTCGTTGTC---GT--TCGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGT-----T---C---CATGGTAAACAGTG---G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTGCTAGGCAC-------AAGAAGTTGGT--------.........................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTG----GGGG-CAGGTTCCCAGCAAGGTGG..................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTTGAGTAAACACACACAA--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAACTGGAAA--GAGGTGT--G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACGTCACAAGAACTGGAAA--GAGGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-CACCGCGTAACCTGAACCTTGAGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAATTGATCTCCAAGAGA...................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTTCGATTGGAGCTGG................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGATCTCCAAGAGAAGGT...............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCA--------------------------------------------------------------------------------------------------------AA-----------GAA---CAGCAAATGTG-TGC---------------TGG-T--.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-T--GAT----------TTGTGATTG-AAAATGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC---------------------TTTG-------GGAGG--------------------------------------------------------------------TCCTTTGCCG.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACAA--GCGCAA-CTCGGACACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCAAGGTGGTTCT-TA...........................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
T---GTCGC---CGT---C---GTTGTCGTCGCC---GTCGCCG------------------------------------------------------------TAGT------AGTTGTCGTTGTCGTTGTCGTTGTTGG---------T---------CTGT-------------------------------------------------C------------------------------ACTG----------------------------TATTGTTGCCACCAA-AGA-A----------AGGCAA-------GAGGAA-CCGAAAATGCCACGAAAGAAA--ATGTGGAGCGT------GAATGTG-ACA--------ATTG-------------TTCAGCGCTA-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGTTCCGTT---C---CATGGTAAACAGTG---GTTGCCCA--------------------------------------------------------------------------------------------------------AA-----------GAA---CAGCAAATGTG-TGC---------------TGG-T--GAT----------TTGTGATTG-AAAATGCGTAATCCTCGTTC-------CGTTGTCATCGTGTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAA-CTCGGACACTTACAAACAC--------------ATACAAA----CT----------CACA-------------AA-CGGGAGCACGCAACTCTACGTCACAAGAACTTGAAA--GAGATGT--GTGGGGG------------GC------AGG-GG-AGGGCTTAGAAG-------TGG---------------------------------------------AGAGG-------------------------------------------------------------------------CCCCAACCGAAA--TACCTGAAAAT-----------TGTAGTTCAACTACATTTAATTGATCTCCAAGAGGTGGGG------G--------CCCAGCAAGGTGGTTCT-TGT-AAATCTTTTTAT--ATGGTGCCTC----CTAAAAAATCGTTTCGTGCTAGGCACAAGGCACAAGAAGTGGGC--------TCTGCTC------------TAGCCCACTCACT-------------------C--------ACTCC---------------------TTTG-------GGAGG--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGATTGGAGCTGGCA-----C------TCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGG------------GC------AGG-GG-AGGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
droYak3
T---GTCGC---CGT---C---GTTGTCGTCGCC---GTCGCCA------------------------------------------------------------TCGT------AGTTGTCGTGGTCGTT------GTTGG---------T---------CTGT-------------------------------------------------C------------------------------ACTG----------------------------TATTGTTGCCAGCAA-AGA-A----------AGGCAA-------GAGGAA-CCGAAAATGCCACGAAAGAAA--ATGTGGAGCGT------GAATGTG-ACA--------ATTG-------------TTCAGCGTTA-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGT-----T---C---CATGGTAAACAGTG---CTTGCCCA--------------------------------------------------------------------------------------------------------AA-----------GAGCAGCAGCAAATGTG-TGC---------------TGG-T--GAT----------TTGTGATTG-AAAATGCGTAATCCTCGTTC-------CGTTGTCATCGTGTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAA-CTCGGACACTTACAAACAC--------------ATACAAG----CT----------CACA-------------AA-CGGGAGCACGCAACTCTACGTCACAAGAACTAGAAA--CGGGTGT--GTGGGGG------------GG--------TG-GAGGGGCTTTGAAG-------TGG---------------------------------------------AGAGG-------------------------------------------------------------------------CCCCAACCGAAA--TACCTGAAAAT-----------TGTAGTTCAACTACATTTAATTGATCTCCCAGAGGTGGGG------G-------ACCCAGCCAGGTGGTTCT-TAT-AAATCTTGTTAT--ATGGTGCCCC----CTAAAAAATCGTTTCGTGCTAGGCAC-------AAGAAGTTGGC--------TTTGCTC------------TAGCCCACTCACT-------------------C--------ACTCC---------------------TTTG-------GGAGG--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGATTGGAGCTGGCA-----C------TCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC--------TTTGCTC------------TAGCCCACTCAC..........................................................................................................................................................................................2111.00101000000000
droEug1
T---GTCGC---CGT---C---GTTGCCGTC---GCCATCGCCA------------------------------------------------------------TCGCTGTCGTAGTTGTCGTTG------------TCGC---------T---------CTAT---------------------------------------------------------------------------------CTC----------------------------TATTGTTGCCACCAA-AGA-A----------ACGCAAGAA------------CAAAAATGCCTCGAAAGAAA--ATGTGGAGCGT------GAATGTG-ACG--------ATTG-------------TTCAGCGTTA-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGT-----T---C---CATGGTAAACAGTG---GTAGCC-------------------------------------A--------------------------------------------------------------------AA-----------ATA---CAGCAAAT--G-TGC---------------TGG-T--GAT----------TTGTGATTG-AAAATGCGTAATCCCCGTTC-------CGTTGTCATCGTGTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAA-GTCGAACACTAACACACAC--------------ACACTCT----CACATATAAAAACACA-------------AA-CGGGAGCACGCAACTCTACGTCACAAGAGTTTGAAG--GAGGTGG--ACAAGGG------------AA------GAA-GG-GGTGC--TGAAG-----AGTG-------------------------------------------------TC-------------------------------------------------------------------------CCCAAACCAAAA--TACCTGAAAAT-----------TGTAGTTCAACTACATTTAATTGATCTTAAAAGAACTGAG------GG--------------TAGGGGTTCT-TAC-AAATCTTTATA----TAGAGCCAC----CTAAAAAATCGTTTCGTGCTAGGCAC-------AAGAAGTTGGC--------TCTACTG------------TATCCCACTCGCT-------------------C--------ACTCC---------------------TTTG-------GGAGG--------------------------------------------------------------------TTCTTTGCCGCATAATTTCGATTGGAGCTGGCT-----C------TCSizeHit CountTotal NormTotal
No Reads
droBia1
T---GTCGC---CGT---C---GCCGTCGTCGCC---TTAGCCG------------------------------------------------------------TCGT------GGTTGTCGTTGTCGTT------GTCGC---------T---------CCGC-------------------------------------------------C------------------------------TCTGTG--------------------------TGTGGTGGCCACCGAAAAG-A----------AGGCAAGCAGCCAGAGGAG-CCAAAAATGCCACGAAAG-AA--ATGTGGAGCGT------GAATGTG-GCG--------ATTG-------------TTCAGTGCTA-GCTAACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGTTCT--TGTGC---CATGGTAAACAGTG---TG-GCT---GGCCCCCGTC--------GAAATGTGCGAAATGTG--------------------------------------------------------------------AA-----------ATA---CAGCAAACGCGCTGC---------------TGG-T--GAT----------TTGTGATTG-AAAATGCGTAACCCCCGTTC-------CCTTGTCATCGTGCT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAA-GTCGGACACTCACACACTC--------------ACCTAGG----GG----CA----CTCT-------------AA-CGGGAGCACGCAACTCTACGTCACAAGAGCTAGAGA--GGGGCGT--GGGAA------------------------AA-GGGGTATTGACTTG-------AGG---------------------------------------------AGCGA------------------------------------------------------------------------CCCCAAACCAAAA--TACCTGAAAAT-----------TGTAGTTCAACTACATTTAATTGATCTCCAAATAAAAAAGGTTTAGG-----------GGCGGGGGGGCTCC-TAC-AAATCTTTATA----TAGGGCCTA----CTGAAAAATCGTTTCGTGCTAGGCAC-------AAGAAGTTGGC--------TCCACTC------------TAGCCCACTCACT-------------------C--------ACTCC---------------------CTCGAGA----GGAGG--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGAT-GGAGCTGGCT-----C------TCSizeHit CountTotal NormTotal
No Reads
droTak1
T---GTCGC---CGT---C---GTAGT------------------------------------------------------------------------------------------TGTCGTTGTCGTT------GTTGTCGTTGTCGCTCTG-----TGTCT-------------------------------------------------C------------------------------TGTG----------------------------TATTGTGGCCACCGAAACA-A-------GAAACGCCA-------GAGGAACCCAAAAATGCCACGAAAGAAG--ATGTGGAGCGT---TGTGAATGTTGAGGCGATTGTTCTTG-------------TTCAGTGCTA-GC-TACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGTTCT--TGTGCCATCATGGTAAACAGTG---TG--TTA------------------------------------G--------------------------------------------------------------------AA-----------ATA---TAGCAAGT--G-TGC---------------TGCTT--GAA----------TTGTGATTG-AAAATGCGTAATCCCCGTTC-------CGTTGTCATCGTGTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAA-GTCGGACACTCACACACAT--------------AGGCACA----CT----------CACA-------------AA-CGGGAGCACGCAACTCTACGTCACAAGAGCTTGAAA--GGGGTGG------TGG------------GG------GAA-GG-GGGGT--TGGAG---------A---------------------------------------------ATGTC-------------------------------------------------------------------------CCCAAACCAAAA--TACCTGAAAAT-----------TGTAGTTCAACTACATTTAATTGATCTTGGAAAAACGTAT------GG--------------GAGGGGTTCT-TACAAAATCTTTATAT--ATGGGGCCTC----CTAAAAAATCGTTTCGTGCTAGGCAC-------AAGAAGTTGGC--------TCCACTC------------TAGCCCACTCACT-------------------C--------ACTCC---------------------TTTGAGA-GGCGGAGG--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGATTGGAGCTGGCT-----C------TCSizeHit CountTotal NormTotal
No Reads
droEle1
TGTTGTCGC---CGT---C---GCCGTTGTC---GT---TGT-------CGTTGCC-TTT---------GTCG-------------------------------TCGT------AGTTGTCGTTATCGTG------GTCGT---TGTCGCCCTG-------------------------------------------------------------------------------------------CTC----------------------------TATTGTTGCCACCAA-AAAAAAAAAGAAGAAACGCAAGAGAC-----GAA-CAAAAAATGCCACGAAAGAAA--ATGTGGAGCGT------GAATGTG-GCG--------ATTG-------------TTCAGCATTA-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGT-----T---C---CATGGTAAACAGTG---GTAAACCGA-ATGAAAACCA----------------AAAAACCG--------------------------------------------------------------------AA-----------AAA---CGGCAAATGTG-TGC---------------TGG-T--GAT----------TTGTGATTG-AAAATGCGTAATCCCCGTTC-------CGTTGTCATCGTGTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACACAAACGCAA-GTCGAA-------------------------------------------------------------------AA-GGGGAGCACGCAACTCTACGTCACAAGAGCTTAATA--GAAAGACGGGTAGGGT------------GA----------------------------------G---------------------------------------------AGGGG-------------------------------------------------------------------------CCCCTACAAAAA--TACCTTTAAAC--T------ACTGTAGTTCAACTACATTTAATTGATCTCCAAAAAGGGGGA---------------------------------GAG-AAATCTTTATT----GAGGACCTCCCAAAAAAAAAATTGTTTCGTGCATGGCAC-------AAGAAGTTGGC--------TCTACTC------------TAGCCCACTCACT-------------------C--------ACTCC---------------------TTTG-------AGAGC--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGATTGGAGCTGGCT-----C------TCSizeHit CountTotal NormTotal
No Reads
droRho1
T---GTCGC---CGT---C---GCCGTTGTC---GT---TGC-------------C-TTT---------GTCG-------------------------------TCGT------AGTTGTCGTTGTCGTT------GTCGC---------CCTG-------------------------------------------------------------------------------------------CTC----------------------------TATTGTTGCCACCAA-AAA-A-------GAAACGCAAGAAAC------GA-ACTAAAATGCCACGAAAGAAA--ATGTGGAGCGT------GAATGTG-GCG--------ATTG-------------TTCAGCGTTA-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGT-----T---C---CATGGTAAACAGTG---GTAAACCG--------------------A-ATAACCGAAAACCG--------------------------------------------------------------------AG-----------AAA---CAGCAAAT--G-TGC---------------TGG-T--GAT----------TTGTGATTT-AAAATGCGTAATCCTCGTTC-------CGTTGTCATCGTGTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAA-GTCGAA-------------------------------------------------------------------AA-GGGGAGCACGCAACTCTACGTCACAAGAGCTTCATA--GAAAGGGGAGTGGG----------------------------------------G-------------------------------------------------------AATGG-------------------------------------------------------------------------CCCCAACCAAAA--TACCTAAAATC--T------ACTGTAGTTCAACTACATTTAATTGATCCCGAAAAGGGGAGA---------------------------------GAG-AAATCTTTATA----GAGGACCTC-----CCAAAAATCGTTTCGTGCAAGGCAC-------AAGAAGTTGGC--------TCTACTC------------TAGCCCACTCACT-------------------C--------ACTCC---------------------TTTG-------AGAGG--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGATTGGAGCTGG----------------SizeHit CountTotal NormTotal
No Reads
droFic1
T---GTCGC---CGT---C---GTTGCCGTT---GT------------------------------------------------------------------------------------------------------CGC---------TCTG-------------------------------------------------------------------------------------------CTC----------------------------TATTGTTGCCACCAAGACA-A-------GAAACGCAAGAAGT---------TCAAAAATGCCACGAAAAAAATTATGTGGAGCGT------GAATGTG-GCA--------CTCA-------------TTTAGCGTTA-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGT-----T---C---CACTGTAAACAGTG---GTAACCCG--------------------A------------------AATAAA-----------------------------------------------------------AA-----------ATA---AAGCAAA--TG-TGC---------------TGG-T--GAT----------TTGTGATTG-AAAATGCGTAATCCTCGTTC-------CGTTGTCATCGTGTTTCACCGCGTAACCTGAACCTTGAGTAAACACACACACAGTCGCAA-GTCGACCACACACACACAC--------------ACACACA----CT----------CACAGACGTA------AAA-GGGGAGCACGCAACTCTACGTCACAAGAGCCTCAAA--AAGGA-----TGGGGT------------A---------------------CAAAG-------T------------------------------------------------GGGT-------------------------------------------------------------------------CCCACACCACAG--CACCTGAGAAATAT------ATTGTAGCTCAACTACATTTAATTGATCTCCAAAAAAAGGGG------GC-------------------------GAG-AAATCTTTCC-------------A----CTAAAAAATCGTTTCGTGCTTGGCAC-------AAGAAGTG-GC--------TCTTTTC------------TAGCCCACTCACT-------------------C--------ACTCC---------------------TTCTTCG----GGTGG--------------------------------------------------------------------TCCTTTGCCGCATAATTTCGATTGGAGCTGGCA-----T------TCSizeHit CountTotal NormTotal
No Reads
droKik1
T---GTCGT---CGC---C-------------------------------------------------------------------------------------TCGT------AGCTGCCGTTGTCGCT------GTCGT---TGTCGCT--G-------------------------------------------------------------------------------------------CTC----------------------------CATTGTTGCCACCAA-GG--A----------ACGCAAGAGGCAAAA---A-GACAAAATGCCACGAAAG-AA--ATGTGGAGCGT------GAATGTG-ACGTTT--TTGTTCT-------------TTCAGCGTTT-GC-AACTTTTGACCCCGTGC--GCAATCAGGTCACC-A---TTGTCCT--T---C---CATGGTAAACAGTG---TA-ACC----------------------------------------------------------------------------------------------------------GA-----------AAA---CGGGAACTGTG-CGGGATTCG---GATTC----GG--GAT----------GTGTGATTG-AAAATGCGTAATCCTCGTTC-------CGTTGTCACC--GTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAA-GTCACACACTCACACACGC--------------ACACTAT----CG----------CGAC-------A-CACTAA-CGGGAGCACGCAACTCTACGTCACAAGAGCTCGAAG--GAGGAGA--GTGAAAG------------AG------AAA-GG-GGAGCAGAAGGG-------TGGCCT------------------------------------------GGTAG-------------------------------------------------------------------------CCCAAACAAAAA--TACATGAAAAA-----------CGTAGTTGGACTACATTTAATTGATCTCCAAAATCCTGGG------GC--------------AGGGGAGCCT-AAC-AAATCTTT---------GGGCCAG----CTGAAAAATCGTTTCGTGCAAAGCAC-------AAGAAGTTGCCAAG--------GCACTCACAC------CAACTTACTC---CGTCTC-------------------CTCACTCC---------------------TTCG-------AGGGA--------------GCGCAAGAGGGATAGGGCTAGG--------------------------GTGGCCGCCTATGCCGCATAATTTCGATTGGAGCAGGC---------------SizeHit CountTotal NormTotal
No Reads
droAna3
T---GTCGT---TGT---------------------------------------------------------------------------------------------------------------CGTT------GTCGCTGT---CTCCTTC--G-------------------------------------------------------------------------------------------TGGCTCGTCGCTGTCGCTGTCGCTGGCCTATTGT------CA--AAG-A----------ACACAAGAAGTTCTG---C-CACAAAATGCCACGAAAGAAA---TGTGGACCGT------GATTGT---------------TT-------------TTCAGCGTTT-----------------------GCAATCAGGTCACC-A---TTGT-----C---C---CACGGTAAACACACGCTGGGAACTGC-TGGGTCCTTAAAAACCCGA--TGTCCGATGTCCT--------------------------------------------------------------------GA-----------AAA---CTGAAACTGTG-CGGGCCGTGT----------G-T--GAT----------TTGTGATTG-AAAATGCGTAATCCCCGTTC-------CGTTGTCACC--GTT-CACCGCGTAACCTGAACCTTGAGTAAATACACACAG--GCGCAAAGTCGCAAACACACACATACACACATACACACATACACACACTCTCA----------CACA-------------AA-CAGGAGCACGCAACTCTACGTCACTAGAGCTGAATA--TGCGGGGGGATGGGTTGAGGGTTAAGGGAG------AAG-GA-GAAAG--CAAAG-------------------------------------------------------AAGGG-------------------------------------------------------------------------CCAC----AAAC--TACATGAAAAATTAAGTTGAAATGTAGTGGAACTACATTTAATTGATCTCGGGGCAATAGGG----------------------------CCCAAAAC-AAATCTTCAA-------AAGGCAA----CTGAAAAATCGTTTCGTGCAAAGCAC-------AAGAAGTTGCCAAG--------GCACTCACACAC----CAACCAACTC---GGTCGCCAGCTCGCTCACTC--------ACTCC---------------------TTTATAG----AAA------GGAGCAGGGAGCGGGAGCGGG-------AGCAGG----------------AGCAGTAGAGGACCGTCTATGCCGCATAATTTCGATTGGAGCAAGCTCCCCAC------TCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------AGCAGG----------------AGCAGTAGAGGACC...............................................2111.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGGGGATGGGTTGAGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAGCGGGAGCGGG-------AGCAGC----------------T............................................................2350.201010000
droBip1
T---GTCGT---TGT---------------------------------------------------------------------------------------------------------------CGTT------GTCGCTGT---CTCCTTC--G-------------------------------------------------------------------------------------------TGGCT-------GTCGCTGTCGCTGGTCTATTGT------CAA-AAG-A----------ACACAAGAAGTTCTG---C-CACAAAATGCCACGAAAGAAA---TGTGGACCGT------GATTGT---------------TT-------------TTCAGCGTTT-T---------------------GCAATCAGGTCACC-A---TTGT-----C---C---CACGGTAAACACACACGGTAGCTT--GGCCAAAACC--------GATGTTGGCCAAAGCCT--------------------------------------------------------------------GA-----------AAA---CTGAAACTGTG-CGGGCCGTGT----------G-T--GAT----------TTGTGATTG-AAAATGCGTAATCCCCGTTC-------CGTTGTCACC--GTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACAG--GCGCAAAGTCGCAAACACACACACAC--------------ACACACG----CT----CACATTCACG-------------AA-CGGGAGCACGCAACTCTACGTCACTAGAGCTGAATA--GGCGGGG--ACGGGTT-------AAGGGAGGAGGACGAG-GA-GGAGCAACGAAG-------GGTCAC------------------------------------------AGTGG-------------------------------------------------------------------------CGCAAACCAAAAAATACATGAAAAATTTAGTTGAAATGTAGTGGAACTACATTTAATTGATCTCGGGGCCCCC-----------------------------CCCCCT-AAC-AAATCTTTA--------GAGGCAG----CTGAAAAATCGTTTCGTGCAAAGCAC-------AAGAAGTTGCCAAGAGGC----GCACTCACACCA----CAACCAACTC---GGTCGCTAGCTCGCTCACTCACTCACTCACTCC---------------------TTGA-------AAAAAAAATAAAGGAG----CGGGAGCGGT-------AGCAGGAG----------------------AGGACCGTCTATGCCGCATAATTTCGATTGGAGCAAGCT-----C------CCSizeHit CountTotal NormTotal
No Reads
dp5
T---GTCGT---CGC---C---GTCGTCGTC---GC---TGC--TCCTCTATTGTCGTTT---------GTCGCCACAGCCATAGCCACAACCATTGCCATAGC----------CA---------------------TCGCCA---TCGCCTCTTCTTGTCCGTTGTTTCGCT-AAGGCTCCTCCTG---------------------------------------------------------------------------------------------------------------------------------------------CGATAATGGCAAGAAAGAA---ATTTGGAACGC------GAACGTG-AATGGT--T--TTTT-----------TTTTGTGTGTTTTGC-AACTTTTGACCCCGTGCGCGCAATCAGGTCATA-AAAATTGT-----T--------------------------AACTCT--------------------A----------------AAAGTATGAAATGAGACGAGGAGCTATGGCCATGCCTATGCCCATGCCCACTCTCTGTTGACTACGGGTAAACACTGGGAAAA---CTGTGACTGTG-TGGTACC-GTTCGGTGC----GGGGGGTTTTCCTTTCCGTGTGATTG-AAAATGCGTAATCGTT--CCTGTCGTCCGTTG---CC--GTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACACAGACTCAAAATCTGTAACACACACACAC--------------------------C----------CACA------CACAGCCAG-TAGCAGCACGCAACTCTACGTCACTCAATCAGAAGC--GAGGGGG--GTGGTGT------------CG------GAAA-GAGACACATGCCAG-------TGTGGT------------------------------------------TTTCC-------------------------------------------------------------------------CCACAATAGAAA--TACAAGAAATT--T------G-TGTGCTCCAACTACATTTAATTGATCTGCCTCTA-------------------------------------T-GGG-AAATCTTTTTAGTGGCGGAGGCAG----CTGAAAAATCGTTTCGTGCAAAGCAC-------AAGAAGTTGCCAAGGAGGCAGTAGTC------------CTCCTCATACTCT-------------------C--------AATCCTTCAGCCGTTGCCA---------GA-GTGT------AGGGTAAGGTAGGGTATGGG-----T-------TAAGGGGTCTGGCAGTCGTCGTCGCCGCCGCCGCCTATATATGCCGCATAATTTCGATTGGAGCTGGCA-----G------GCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
T---GTCGT---CGC---C---GTCGTCGTC---GC---TGC--TCCTCTATTGTCGTTT---------GTCGCCACAGCCATAGCCACAACCATTGCCATAGC----------CA---------------------TCGCCA---TCGCCTCTTCTTGTCCGTTGTTTCGCT-AAGGCTCCTCCTG---------------------------------------------------------------------------------------------------------------------------------------------CGATAATGGCAAGAAAGAA---ATTTGGAACGC------GAACGTG-AATGGT--T--T-TT----------TT-TTGTGTGTTTTGC-AACTTTTGACCCCGTGCGCGCAATCAGGTCATA-AAAATTGT-----T--------------------------AACTCT--------------------A----------------AAAGTATGAAATGAGACGAGGAGCTATGGCCATGCCTATGCCCATGCCCACTCTCTGTTGACTACGGGTAAACACTGGGAAAA---CTGTGACTGTG-TGGTACG-GTGCGGTGCG---GGGGGGTTTTCCTTTCCGTGTGATTG-AAAATGCGTAATCGTT--CCTGTCGTCCGTTG---CC--GTT-CACCGCGTAACCTGAACCTTGAGTAAACACACACACAGACTCAAAATCTGTAACACACACACAC--------------AC----------C----------CACA------CACAGCCAG-TAGCAGCACGCAACTCTACGTCACTCAATCAGAAGC--GAGGGGG--GTGGTGT------------CG------GAAA-GAGACACATGCTAG-------TGTGGT------------------------------------------TTTCC-------------------------------------------------------------------------CCACAATAGAAA--TACAAGAAATT--T------G-TGTGCTCCAACTACATTTAATTGATCTGCCTCTA-------------------------------------T-GGG-AAATCTTTTTAGTGGCGGAGGCAG----CTGAAAAATCGTTTCGTGCAAAGCAC-------AAGAAGTTGCCAAGGAGGCATTAGTC------------CTCCTCATACTCT-------------------C--------AATCCTTCAGCCGTTGCCA---------GA-GTGT------AGGGTAAGGTAGGGTATGGG-----T-------TGAGGGGTCTGGCAGTCGTCGTCGCCGCCGCCGCCTATATATGCCGCATAATTTCGATTGGAGCTGGCA-----G------GCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
C---GTCGT---CGC---CGTCGTTGTCGTT---GTCGTCGTCA------------------------------------------------------------TCGT------CATCATCGTTG---------------------------------------------------------------------------------------------------------------------------------------------------------TCGTTGCCGGCAA-----------------------------CAGGAG---GAACACGCAAAATAAAAAA--ACAAGGAACAA------GAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAA-----------------------------------------------------------------------TGTGCCCCCTGTTATACGTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................GTT---GTCGTCGTCA------------------------------------------------------------TCGT------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18202.00401500250
............................GTT---GTCGTCGTCA------------------------------------------------------------TCGT------CATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.07110000
...........................CGTT---GTCGTCGTCA------------------------------------------------------------TCGT------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
droVir3
C---GTCGT---CGT---C---GCCGTTCGC---CT--GCG----------------TCCGCCA----------------------------------------T--T------TA---------------------TTGCCG---TCGCCTCT--TTGTCGGTCG----GTC-GAGGCTC---CAGCGAAAATGACAAAATGTGAATATGCTCTGTGTATGTGTGTCTCCGTGTGACTCCGTCTC------------------------------------------------------------------------------------------------------------TGTGTGTGTT----------GTTTTCATTTTCCTTTTTTTTTTTTT---TTTTGTATTT-TG-AACTTTTGACCC-GTAC--GCAATCAGGTCATT-TAAATG-------------------------------------------------------------------------TTGAAACATTGTAAATGAGCCAGGTTTCAG-----------------------------TTTTGTTTGCCGTT-----------AAA---CAACTTTT--G-TGC---------------T-----------------------GATTGAAAAATGCGTAATC------------------------------------GTAGCCTGAACCTTGAGTAAACACACACAC--ACACA------------------CAC--------------ATGCACA----CA----------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........T---CGT---C---GCCGTTCGC---CT--GCG----------------TC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................AGCGAAAATGACAAAATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000100
........................................G----------------TCCGCCA----------------------------------------T--T------TA---------------------TTGCCG---T.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTAATC------------------------------------GTAGCCTGAACCTTGAGTAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000000000000000000000000000000000000000000000000000000000000
...............................................................A----------------------------------------T--T------TA---------------------TTGCCG---TCGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.001000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACACACAC--ACACA------------------CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.102002000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAACACACACAC--ACACA------------------CAC--------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000100000000000000000000000000000000000000000000000000000000000
droMoj3
T---GTCTC---TGC---C---ATT-----------------------------------------------------------------------------------------TA---------------------TTGCTG---TCGCCTCT--TTGTCGGTCG----GTCCGAGGCTC---TAG-----------------------------------------------------------------------------------------------------CGA--AA-A----------TGACAA-------AA---A-GTGAATATGCTTGAGTATTCG--TGTTTGTGTGTGTTTGTGTG-----CGTTGT--TTTCTTT-------------TTTTGTATTT-TG-AACTTTTGACCCG-TACGCGCAATCAGGTCATTAAAAATTGT-----T---T--------------------------C------------------------------------GAAATACTGTAAATGAGCTCAGGTT-------------------------------------------------------------------------------CCGTTT---------GT-T--TTC----------TGCTGATTG-AAAATGCGTAAC------------------------------------CGTAACCTGAACCTTGAGTAAACAGCTACAC--ACGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
T---GCTGCCGCCGTCGTC---GCCGTT------------ACCG----------TCGTTTGTTGCCGTTGCCG-------------------------------TCGC------AGTTGTCGTCGC------------------------CTGT--TTGTCGGTCG----GTT-TAGGCTC---CAG-----------------------------------------------------------------------------------------------------CG--------------------------------------GAAAAATGAC-------AAA--ATGTGGATATT----GTGATT-T--AGCTTC--TTATTTT-------------TTTTATATTT-TG-AACTTTTGACCC-GTAC--GCAATCAGGTCATA-ACAAAAAA-----G--------------------------AATT-----------GTT-------TA----------------ACACTGTAAAATGAGCCAAGTAATTT-----------------------------TGTTGTTTGTTG----TTGCTGTTGAAA---CTTTTTTTGTG-CAA----------------------GTC----------TTCTGATTG-AAAATGCGTAAT------------------------------------CGTAACCTGAACCTTGAGTAAACACACACAC--ACACAC-ATAACAGTTGTATAGATAT--------------GTGTGTG----AG----TG----TGTG--TGTG-------TGTGGCTAGCACGCAACTCGACGTCACAGGACCACCCGTCAAAGAGA---ATGAG---------------A------GAGG-GAGAGACGGAGAAGTTAAATGTGTTGCCAGCAACAACAACAGCAACAACAACGTCATATTGCCCATGTTTTAATACAAAACAGAATCAAATTTAAAGTGTTTGCCAAGCACCCCCCAACCCAACCGCCCCTTAGCAGCCCCCAGCACCCCAAACCATTT--T---TAAATAT---------TTCCCCGTTTGGCTCCATTGAATCA-----CAAA------------------------------------------------------------AAAAGGCAA----ATGAAAAATCGTTTCGTGCAAAGCAC-------GAGAAGTCGTCAAGGCACCCCCTTGA-----CACCTCATACCCCACTC----------------------------------CCCATACCCACTTCACAGACCCCTTTTTTG----TGTGC--------------------------------------------------------------------CCCTATGCCGCATTATTTCGTTTTT-----GCC-----T------CCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 03:49 AM