ID:dsi_28308 |
Coordinate:3l:7324772-7324921 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
intergenic
No Repeatable elements found
|
GATGTTTCTATGTGGAATTTATTACAGGGATACCATTATATTATGCTTATTATAAGTTTATCCGTTTCCATAGTTATACTGGCGACTCTAGTTCTTTTAGTCTATGCGGCGATCTGTGATAAAATTCGAATTCTAAAAGTGGTTGGTTAGCATGAGGTTTTACAAAAATCTTTAAGATGAATTCTTGGTGTCATTTTTAGATGATCTTTGTTTATGTAGCAATCGTCGTGGTGAAACTGATAATTCTGTT
**************************************************....((((((((......(((.((((.((((((.(((..(((((.(((.(((...((((....))))))).)))...))))).....))).)))))))))))))(((((((...)))))))....)))))))).................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR902009 testis |
O001 Testis |
SRR553488 RT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
SRR553485 Chicharo_3 day-old ovaries |
SRR553486 Makindu_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................................................TTATGTAGCAATCGTCGTGTT.................. | 21 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................ATTCTAAAAGTGGTCGGTTAG.................................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................................................................................................GTAGCAATCGTCGTGTTGAA............... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................................................TAAAAGTGGTCGGTTAGCATGT............................................................................................... | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................AAAGTGGTCGGTTAGCATGA............................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................................................................................................................................................................ATCTTTGTTTATGTAGCAA............................ | 19 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................................................TAAAAGTGGTCGGTTAGCATG................................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................................................AATTCTAAAAGTGGTCGGTTTT.................................................................................................... | 22 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................................GTGGTCGGTTAGCATGAGGTTT.......................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................................................................................TTTATGTAGCAATCGTCGTG.................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................................................................................................................CCGTCGTGGTGAAATTGGTA........ | 20 | 3 | 4 | 0.25 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ................................................................................................................................................................................................................................GTCGTGGTGAAATTGGTA........ | 18 | 2 | 5 | 0.20 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................................................................................................................................................TCGTGGTGAAACTGG.......... | 15 | 1 | 11 | 0.09 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...............................................................................................GTTAGTGTATGCGGCGAGC........................................................................................................................................ | 19 | 3 | 14 | 0.07 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ....................................................................................................................................................................................................................................TGGCGAAAGTGGTAATTCT... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................................................................................................................TTCTCAAAGTGGTTG......................................................................................................... | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...................................................................................................................................................................................................TTTAGAAGATCTTTG........................................ | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ...............AAGTTACTACAGGGAT........................................................................................................................................................................................................................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| ..............................................................................................................................................................................................TCGTTTTTAGATGAT............................................. | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
|
CTACAAAGATACACCTTAAATAATGTCCCTATGGTAATATAATACGAATAATATTCAAATAGGCAAAGGTATCAATATGACCGCTGAGATCAAGAAAATCAGATACGCCGCTAGACACTATTTTAAGCTTAAGATTTTCACCAACCAATCGTACTCCAAAATGTTTTTAGAAATTCTACTTAAGAACCACAGTAAAAATCTACTAGAAACAAATACATCGTTAGCAGCACCACTTTGACTATTAAGACAA
**************************************************....((((((((......(((.((((.((((((.(((..(((((.(((.(((...((((....))))))).)))...))))).....))).)))))))))))))(((((((...)))))))....)))))))).................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR902009 testis |
SRR553486 Makindu_3 day-old ovaries |
M024 male body |
|---|---|---|---|---|---|---|---|---|
| .........................................................................................................CGCCGCTAGACACTATTTT.............................................................................................................................. | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................CATAGGGAAAGGCATCAATA............................................................................................................................................................................. | 20 | 3 | 8 | 0.13 | 1 | 1 | 0 | 0 |
| .................................................................................................................................................................................ACTTAAGAAGCACGGTAA....................................................... | 18 | 2 | 10 | 0.10 | 1 | 0 | 1 | 0 |
| ........................................................................................................................................TTCATCAGCCAAGCGTACT............................................................................................... | 19 | 3 | 14 | 0.07 | 1 | 0 | 1 | 0 |
| .......................TGTCAATATGGTAATATAA................................................................................................................................................................................................................ | 19 | 2 | 14 | 0.07 | 1 | 0 | 0 | 1 |
Generated: 04/24/2015 at 04:57 AM