ID:

dsi_28156

 Coordinate:

3l:8111073-8111222 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Flybase annnotation

exon [3l_8110932_8111072_-]; CDS [3l_8110932_8111072_-]; intron [3l_8111073_8111857_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TATATATACTTTTGATTTAATTGCGTTAATGTATTTCCCCCCGAGTATTTGTAATTGTGTAATGGCCCGCTATTGTTATACAAAATGTTTATGTATTACGATTTATGTTCTATTCCATGTCTTTGACAACGCTTACGCACACTTCTACCCCACAACAACAACTACTACTTCAATATAAAACGTAATTCGTATTAATATAGCCGCCGATGCATCCGCAAGGCGGGCTCATGGGGAACCAACAGCCGCCACC
**************************************************....(((((((((((.......))))))))))).(((((((((.((((((.((((((((........((((...))))..((....)).................................)))))))).)))))).))))..)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M053
female body
 M023
head
 O001
Testis
 SRR1275487
Male larvae		 O002
Head
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR1275483
Male prepupae		 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR1275485
Male prepupae		 GSM343915
embryo
 SRR902009
testis
........................................................................................................................................................................................................................AAGGGGGGCTCATGGAGAAC.............. 20 2 1 2214.00 2214 1314 422 343 70 23 13 15 1 4 1 3 1 2 2 0 0
.......................................................................................................................................................................................................................TAAGGGGGGCTCATGGAGAAC.............. 21 3 1 1201.00 1201 822 159 178 22 6 6 4 1 0 1 1 0 1 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCTCATGGAGAAC.............. 19 2 2 1191.50 2383 1446 384 468 45 12 15 6 1 4 0 1 0 0 1 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGGAGA................ 18 2 3 440.00 1320 86 1177 13 20 6 2 3 1 1 2 1 2 2 2 2 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGGAGAA............... 19 2 3 342.33 1027 150 798 37 10 14 1 1 2 2 4 1 2 0 4 1 0
.........................................................................................................................................................................................................................AGGGGGGCTCATGGAGAA............... 18 2 6 242.17 1453 178 1194 42 8 12 3 0 8 2 3 1 0 1 1 0 0
..........................................................................................................................................................................................................................GGGGGGCTCATGGAGAAC.............. 18 2 4 178.75 715 387 184 99 38 1 3 3 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TAAGGGGGGCTCATGGAGAA............... 20 3 4 126.75 507 187 255 44 4 8 2 0 2 1 2 1 0 1 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGGAGAACA............. 21 3 3 103.00 309 200 57 42 4 0 1 0 2 0 1 0 1 1 0 0 0
.......................................................................................................................................................................................................................TAAGGGGGGCTCATGGAGA................ 19 3 12 44.33 532 74 412 12 14 5 2 0 3 0 2 0 2 5 1 0 0
.........................................................................................................................................................................................................................AGGTGGGCTCATGGAGAAC.............. 19 2 1 8.00 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGGAGAACG............. 21 3 1 7.00 7 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCTCATGGGGAA............... 18 1 1 4.00 4 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGGGGAAC.............. 20 1 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGTAGAAC.............. 20 3 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGTGGGCTCATGGAGAAC.............. 20 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCTCATGGGGAAC.............. 19 1 1 4.00 4 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGGTGAAC.............. 20 2 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CAAGGGGGGCTCATGGAGAAC.............. 21 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCGTGGAGAAC.............. 20 3 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TAAGGTGGGCTCATGGAGAAC.............. 21 3 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTTATGGAGAAC.............. 20 3 6 1.83 11 10 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGTCTCATGGAGAAC.............. 20 3 6 1.83 11 8 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGAGGGCTCATGGAGAAC.............. 20 2 2 1.50 3 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGGGGGCTCATGGAGAAC.............. 19 3 20 1.40 28 20 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCTCATGGATAAC.............. 19 3 9 1.33 12 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCTCATGTAGAAC.............. 19 3 7 1.29 9 5 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AGGGGGGGCTCATGGAGAAC.............. 20 3 5 1.20 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGTCTCATGGAGAAC.............. 19 3 15 1.07 16 11 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGGGGGCTCATGGGGAAC.............. 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CTAAGGCGGGCTCATGGAGAAC.............. 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CGGGCTCATGGGGAACCAACA......... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGGGGA................ 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCTCATGGGGAACA............. 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGCGGGCTCATGGAGAACA............. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CTAAGGGGGGCTCATGGGGAAC.............. 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CGCACGGGGGGCTCATGGAGAA............... 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGCGGGCTCATGGAGAAC.............. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TAAGGCGGGCTCATGGAGAA............... 20 2 2 1.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGCGGGCTCATGGAGAAC.............. 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GTAAGGGGGGCTCATGGAGAAC.............. 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TAAGGGGGGCTCATGGGGAA............... 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TAAGGGGGGCTCATGGGGAAC.............. 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................GATGCATCCGCAAGGCG............................ 17 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................AAAGGGGGGCTCATGGAGAAC.............. 21 3 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AGGGGGGGCTCATGGGGAAC.............. 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGG................... 15 1 9 0.89 8 0 0 0 0 1 0 0 0 0 0 1 6 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCTCATGGAGA................ 17 2 17 0.88 15 0 0 0 0 6 0 0 1 1 1 2 2 1 1 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGGA.................. 16 2 20 0.85 17 0 0 0 0 0 0 0 3 2 0 3 8 1 0 0 0
........................................................................................................................................................................................................................AACGGGGGCTCATGGAGAAC.............. 20 3 6 0.83 5 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCTCATGGAGAACG............. 20 3 6 0.83 5 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGTGGGCTCATGGAGAAC.............. 18 2 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGGAG................. 17 2 12 0.75 9 0 0 0 0 2 0 0 0 0 2 1 4 0 0 0 0
........................................................................................................................................................................................................................AAGTGGGGCTCATGGAGAAC.............. 20 3 13 0.69 9 8 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGGGGGCTCATGGAGAA............... 17 2 13 0.69 9 0 0 0 0 2 0 0 3 3 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................CAAGGGGGGCTCATGGAGAA............... 20 2 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGGATAAC.............. 20 3 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TAAGGGGGGCTCATGGTGAAC.............. 21 3 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGTGCTCATGGAGAAC.............. 20 3 6 0.67 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGACTCATGGAGAAC.............. 20 3 5 0.60 3 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1
........................................................................................................................................................................................................................AAGGGGGGCTCATGGAGAAG.............. 20 3 5 0.60 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGTGGCTCATGGAGAAC.............. 20 3 5 0.60 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGCAGAAC.............. 20 3 7 0.57 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAAGGGGGCTCATGGAGAAC.............. 20 3 10 0.50 5 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGCGGGCTCATGGAGAA............... 18 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCTCATGGGGA................ 17 1 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCTCATGGAGAACGAA........... 22 3 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTGATGGAGAAC.............. 20 3 6 0.50 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ACGGGGGGCTCATGGAGAAC.............. 20 3 4 0.50 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CAGGGGGGCTCATGGAGAAC.............. 20 3 4 0.50 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGGCGAACA............. 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGGGAAC............... 19 3 8 0.50 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCTCATGGTGAA............... 18 2 5 0.40 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCTCATGCAGAAC.............. 19 3 15 0.40 6 4 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TAGGGGGGCTCATGGAGAAC.............. 20 3 8 0.38 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TAAGGGGGGCTCATGGAG................. 18 3 20 0.35 7 0 0 0 0 2 3 0 0 0 2 0 0 0 0 0 0
.......................................................................................................................................................................................................................CAAGGGGGGCTCATGGAGA................ 19 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGCGCTCATGGAGAAC.............. 20 3 9 0.33 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGAGGGGCTCATGGAGAAC.............. 20 3 9 0.33 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCCCATGGGGAA............... 18 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGAGGGCTCATGGAGAA............... 18 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCTCATGGTGAAC.............. 19 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GAAGGGGGGCTCATGGAGAAC.............. 21 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGCGGGGCTCATGGAGAAC.............. 19 3 20 0.30 6 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CCTAAGGGGGGCTCATGGG.................. 19 3 7 0.29 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CAGGGGGGCTCATGGAGAA............... 19 3 18 0.28 5 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TAGGGGGGCTCATGGAGAA............... 19 3 15 0.27 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CTAGGGGGGCTCATGGAGAA............... 20 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CCAAGGGGGGCTCATGGAGAA............... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGGAGAACT............. 21 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................GAGGATTTGTAATTGT................................................................................................................................................................................................ 16 1 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCACGGAGAAC.............. 20 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ATGGGGGGCTCATGGAGAAC.............. 20 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GGGGGCTCATGGAGAAC.............. 17 2 13 0.23 3 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCCCATGGAGAAC.............. 20 3 9 0.22 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGGAGAG............... 19 3 14 0.21 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCCCATGGAGAAC.............. 19 3 19 0.21 4 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGACTCATGGAGAA............... 19 3 19 0.21 4 0 1 0 0 0 0 0 0 0 3 0 0 0 0 0 0
..........................................................................................................................................................................................................................AGCGGGCTCATGGAGAAC.............. 18 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGAAGAAC.............. 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGGACAAC.............. 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGAGGCTCATGGAGAAC.............. 20 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCAAGGAGAAC.............. 20 3 12 0.17 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGGATAA............... 19 3 19 0.16 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGTGCTCATGGAGAA............... 19 3 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TAAGGGGGGCTCATGG................... 16 2 20 0.15 3 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................AGGGGGGGCTCATGGAGAA............... 19 3 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGGAGCAC.............. 20 3 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGTGGGCTCATGGAGAACA............. 20 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGCGGGGCTCATGGAGAAC.............. 20 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGTGGGCTCATGGAGAA............... 18 2 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GAAGGGGGGCTCATGGAGAA............... 20 3 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATTGAGAAC.............. 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCTCATGGAGAACT............. 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ATGGGGGGCTCATGGAGAA............... 19 3 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGGAAAA............... 19 3 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGAGGCTCATGGAGAAC.............. 19 3 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCACATGGAGAAC.............. 20 3 13 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCACGGAGAA............... 19 3 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CTAAGGCGGGCTCATGGAG................. 19 3 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCGTGGAGAA............... 19 3 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGGCTCATGTAGAA............... 19 3 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CGGGGGGCTCATGGAGAAC.............. 19 3 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGGGGGTCTCATGGAGAA............... 19 3 16 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCTCATGGAGAGC.............. 19 3 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCTCATGGACAAC.............. 19 3 17 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGTGGGCTCATGGAGAAC.............. 19 3 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GGGTGGGCTCATGGAGAAC.............. 19 3 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCTCATGGAGAAG.............. 19 3 19 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGCGGGGCTCATGGAGAA............... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGGGGGCTCATGGAGA................ 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................AGGGGGGCTCCTGGAGAAC.............. 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGGGGGCTCATGGAGAGC.............. 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ATATATATGAAAACTAAATTAACGCAATTACATAAAGGGGGGCTCATAAACATTAACACATTACCGGGCGATAACAATATGTTTTACAAATACATAATGCTAAATACAAGATAAGGTACAGAAACTGTTGCGAATGCGTGTGAAGATGGGGTGTTGTTGTTGATGATGAAGTTATATTTTGCATTAAGCATAATTATATCGGCGGCTACGTAGGCGTTCCGCCCGAGTACCCCTTGGTTGTCGGCGGTGG
**************************************************....(((((((((((.......))))))))))).(((((((((.((((((.((((((((........((((...))))..((....)).................................)))))))).)))))).))))..)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
............................................................................................................................................AGAAGATGGGGTGTTGTTGTTG........................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..........................................CTCATAAACATTAACACATT............................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................TCTCGGGCCATAACAATA........................................................................................................................................................................... 18 3 20 0.40 8 0 0 2 3 0 0 2 0 1 0
.......GGAAAACTAAATTAACCCAA............................................................................................................................................................................................................................... 20 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................GATGATGGAGTTAGATTT....................................................................... 18 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................TGTTGATGATGGAGT.............................................................................. 15 1 16 0.13 2 0 0 1 0 1 0 0 0 0 0
............................................................TTCTCGGGCCATAACAATA........................................................................................................................................................................... 19 3 17 0.12 2 0 0 2 0 0 0 0 0 0 0
.................................................................................................................................................ATGGGGTGTTGCTGT.......................................................................................... 15 1 9 0.11 1 0 0 1 0 0 0 0 0 0 0
.............................ACATAAAGGGGCGATAATAAA........................................................................................................................................................................................................ 21 3 9 0.11 1 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................CAGCCAGAGTACCCCTT............... 17 2 9 0.11 1 0 0 0 0 1 0 0 0 0 0
...............................................................TCGGGCCATAACAATA........................................................................................................................................................................... 16 2 20 0.10 2 0 0 1 0 0 0 0 1 0 0
.........................................................................................................................................................................AGTTATATTTTGAATT................................................................. 16 1 20 0.10 2 0 0 2 0 0 0 0 0 0 0
.........................................................................................................................................................TTGGTGTGGATGATGGAGT.............................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
............................................................................................................................................................TCGTTGATAATGAAGTT............................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0

Generated: 04/24/2015 at 10:42 AM