ID:dsi_2813 |
Coordinate:3l:8210432-8210514 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3l_8210201_8210431_-]; CDS [3l_8210201_8210431_-]; CDS [3l_8210515_8210579_-]; exon [3l_8210515_8210661_-]; intron [3l_8210432_8210514_-]
No Repeatable elements found
| ##################################################-----------------------------------------------------------------------------------################################################## AAGTGGCTGGAACGCATTGAGTTCCCCAATAGCAAAGACAACGAGATCAGGTAAAACTTTCTCATTCGTGGAAAACAGCAACCTGTTGCTCGCTATAACGCCATAACGGTAATCGGAAAACCCAATTTTCCAGTGTCCACAATGTGTGCTACGCACCCGATGGCAGCCAATTGGTGGTGGCTG **************************************************..................(((((((......((.(((((.((.(((......))).))))))).)).........))))))).************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553488 RT_0-2 hours eggs |
O001 Testis |
M023 head |
|---|---|---|---|---|---|---|---|---|---|
| ......................TTCCCAATAGCAAAGACAACGAGA......................................................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| .........................CCAATAGCAAAGACAACGAGATCAGG.................................................................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ........................................................................................CTCGCTATAACGGTATAGCG........................................................................... | 20 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 |
| ......................................................................................................................AACCCAATGTTCTAGTGT............................................... | 18 | 2 | 5 | 0.20 | 1 | 0 | 0 | 1 | 0 |
| ...........................................................................................GCTATACCGCCATGACTGT......................................................................... | 19 | 3 | 8 | 0.13 | 1 | 0 | 0 | 0 | 1 |
| .......................................................................................................TAACGGTGAGCGGAAAA............................................................... | 17 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 |
|
TTCACCGACCTTGCGTAACTCAAGGGGTTATCGTTTCTGTTGCTCTAGTCCATTTTGAAAGAGTAAGCACCTTTTGTCGTTGGACAACGAGCGATATTGCGGTATTGCCATTAGCCTTTTGGGTTAAAAGGTCACAGGTGTTACACACGATGCGTGGGCTACCGTCGGTTAACCACCACCGAC
**************************************************..................(((((((......((.(((((.((.(((......))).))))))).)).........))))))).************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553486 Makindu_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|
| .......................................................TGAAAGAGTAAGCACCTTT............................................................................................................. | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .............................................................................................................................AAAAGGTCGCAGGTGT.......................................... | 16 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 |
| ....................................................................................................GGTATTGCCATTAGA.................................................................... | 15 | 1 | 5 | 0.20 | 1 | 0 | 0 | 1 | 0 |
| ..............................................................................................................................................ACACACTATGCATGGGATA...................... | 19 | 3 | 6 | 0.17 | 1 | 0 | 1 | 0 | 0 |
| ..........................................CGCTAGTCCATTATGAGAG.......................................................................................................................... | 19 | 3 | 10 | 0.10 | 1 | 0 | 0 | 0 | 1 |
| .....................................................................TCTTTTGTCGTTGGA................................................................................................... | 15 | 1 | 18 | 0.06 | 1 | 0 | 1 | 0 | 0 |
Generated: 04/24/2015 at 10:45 AM