ID:

dsi_28053

 Coordinate:

2r:2018605-2018754 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.1 -7.9 -7.6

Flybase annnotation

five_prime_UTR [2r_2018462_2018604_+]; exon [2r_2018462_2018604_+]; intron [2r_2018605_2019911_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGTCAATAAAACATTATTGAGCCCGAAAGATATACGTGCATATTTATTATGTATGTATATCATAAAGCAGAAATATTATTATACATGCTTACATACGTGCATATATGCAATTGCATGAGAAACACTAAATTGTGGTATTCAGAGTCAAGATGATTGTCAGTTCAGTTGTTTTTAAAGTTTTAGCCGATGGGATCATGGAATGATTTTTCATCTGGGCCGTTTTTAAGCTCTATCCAAATTCAGTGCTGAA
******************************************************************************************************....((((((((.((((...(((......)))...))))..))......))))))....***************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M024
male body		 M053
female body
 M025
embryo
 SRR902009
testis
.......................................................................................................................................TATTCAGAGTCAAGATGATTGTCAGT......................................................................................... 26 0 1 10.00 10 2 0 2 5 1 0 0 0 0
.............................................................................................................................TAAATTGTGGTATTCAGAGTCAAGA.................................................................................................... 25 0 1 8.00 8 1 5 2 0 0 0 0 0 0
...................................................................................................................TGAGAAACACTAAATTGTGGTATTCAGA........................................................................................................... 28 0 1 6.00 6 0 0 1 4 1 0 0 0 0
............................................................................................................................................................................................TGGATCATGGAATGATTTTACATCTGGGC................................. 29 2 1 5.00 5 4 0 0 1 0 0 0 0 0
.......................................................................................................................................TATTCAGAGTCAAGATGATTGTCAGTT........................................................................................ 27 0 1 4.00 4 3 0 0 0 1 0 0 0 0
............................................................................................................................................................................TAAAGTTTTAGCCGATTGGATCATGGAA.................................................. 28 1 1 4.00 4 0 0 2 1 1 0 0 0 0
............................................................................................................................................AGAGTCAAGATGATTGTCAGTTCAGT.................................................................................... 26 0 1 3.00 3 1 1 0 0 0 0 0 1 0
..........................................................................................................................................TCAGAGTCAAGATGATTGTCAGTTCAGT.................................................................................... 28 0 1 3.00 3 1 0 1 1 0 0 0 0 0
......................................................................................................................................................................TATTTTTAAAGTTTTAGCCGATTGGA.......................................................... 26 2 1 3.00 3 0 0 2 1 0 0 0 0 0
...........................................................................................................................................................................TTAAAGTTTTAGCCGATTGGATCATGGAA.................................................. 29 1 1 3.00 3 2 0 1 0 0 0 0 0 0
....................................................................................................................................................................................TAGCCGATTGGATCATGGAATGATTT............................................ 26 1 1 2.00 2 2 0 0 0 0 0 0 0 0
......TAAATCATTATTGAGCCCGAAAGATA.......................................................................................................................................................................................................................... 26 1 1 2.00 2 1 0 0 0 1 0 0 0 0
..........................................................................................................................................................................TTTAAAGTTTTAGCCGATTGGATCATGGAA.................................................. 30 1 1 2.00 2 1 0 1 0 0 0 0 0 0
..........TCATTATTGAGCCCGAAAGATATACG...................................................................................................................................................................................................................... 26 1 1 2.00 2 0 0 0 2 0 0 0 0 0
............................................TATTATGTATGTATATCAGAAAGCAGAA.................................................................................................................................................................................. 28 1 1 2.00 2 0 0 0 0 2 0 0 0 0
.................TGAGCCCGAAAGATATACGTGCATATTT............................................................................................................................................................................................................. 28 0 1 2.00 2 0 0 0 0 2 0 0 0 0
...........................................................................................................................................................................................TTGGATCATGGAATGATTTTACATCTGGGC................................. 30 2 1 2.00 2 0 0 2 0 0 0 0 0 0
...........................................................................................................................ACTAAATTGTGGTATTCAGAGTCAAGA.................................................................................................... 27 0 1 2.00 2 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................ATGGGATCATGGAATGATTT............................................ 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0
.........................................................................................................................................................TTGTCAGTTCAGTTATTTTTAAAGT........................................................................ 25 1 1 2.00 2 0 0 0 2 0 0 0 0 0
...............................................................................................................TGCATGAGAAACACTAAATTGTGGTA................................................................................................................. 26 0 1 2.00 2 1 0 0 0 1 0 0 0 0
............................................................................................................................CTAAATTGTGGTATTCAGAGTCAAGA.................................................................................................... 26 0 1 2.00 2 0 0 2 0 0 0 0 0 0
...................................................................................................................................................................................................TGGAATGATTTTTCATCTGG................................... 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0
................................................................................................................................................................................................TCATGGAATGATTTTACATCTGGGCC................................ 26 1 1 2.00 2 1 0 0 1 0 0 0 0 0
........................................................................................................................................................................TTTTTAAAGTTTTAGCCGATTGGATCA....................................................... 27 1 1 2.00 2 0 0 0 0 2 0 0 0 0
.............TTATTGAGCCCGAAAGATATACGTGCA.................................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................GGAATGATTTTTCATCTG.................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0
..............................................TTATGTATGTATATCAGAAAGCAGA................................................................................................................................................................................... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................TTATATCTGGGCCGTTTTTAAGCTCTA.................. 27 2 1 1.00 1 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................AGTTTTAGCCGATTGGATCATGGAA.................................................. 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0
...................................................................................................................................................AGATGATTGTCAGTT........................................................................................ 15 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......................................................................................................ATATGCAATTGCATGAGAAACACTA........................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.........................................................................................................................................TTCAGAGTCAAGATGATTGTCAGTTCGGT.................................................................................... 29 1 1 1.00 1 0 0 1 0 0 0 0 0 0
........AATCATTATTGAGCCCGAAAGA............................................................................................................................................................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................TAAAGTTTTAGCCGATTGGATCATGGA................................................... 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................AGCCGATGGGATCATGGAAT................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.................................................TGTATGTATATCAGAAAGCAGAAA................................................................................................................................................................................. 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0
................................................................................................................................ATTGTGGTATTCAGAGTCAAGATGAT................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................ATTCAGAGTCAAGATGATTGTC............................................................................................ 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0
................................................................................................................................ATTGTGGTATTCAGAGTC........................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................TTCAGAGTCAAGACGATTGTCAGTTCAGT.................................................................................... 29 1 1 1.00 1 0 0 0 1 0 0 0 0 0
..........TCATTATTGAGCCCGAAAGATATA........................................................................................................................................................................................................................ 24 1 1 1.00 1 0 0 0 0 1 0 0 0 0
............ATTATTGAGCCCGAAAGATATACGTGC................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................TGGATCATGGAATGATTTTACATCTGGG.................................. 28 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................TACGTGCATATATGCAAT........................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................TTGGATCATGGAATGATTTTACATCTGGG.................................. 29 2 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................TAGCCGATGGGATCATGGAATGATTT............................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................CGATTGGATCATGGAATGATT............................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1
.........................................................................................................................................................TTGTCAGTTCAGTTATTTTTAAAGTTTT..................................................................... 28 1 1 1.00 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................GCCGATGGGATCATGGAATGATTTT........................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................AAGTTTTAGCCGATTGGATCATGGAA.................................................. 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0
.........................................................TATCAGAAAGCAGAAATATTATTATACA..................................................................................................................................................................... 28 1 1 1.00 1 0 0 0 0 1 0 0 0 0
........................................................................................................................................ATTCAGAGTCAAGATGATTGTCAGT......................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................TCATGGAATGATTTTTCATCTGGG.................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................TTGGATCATGGAATGATTTTACATC...................................... 25 2 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................TCTATCCAAATTCAGTGCTGA. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.................TGAGCCCGAAAGATATACGTGCATAT............................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................TCAAGATGATTGTCAGTTCAGTTATT................................................................................ 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................TTAGCCGATGGGATC........................................................ 15 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................ATTCAGAGTCAAGATGATTGTCAGTTC....................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................TATGCAATTGCATGAGAAACACTAAATT....................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.............TTATTGAGCCCGAAAGATATACGT..................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................TATTCAGAGTCAAGATGATTGTCA........................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.................................................................................................................................TTGTGGTATTCAGAGTCAAGATGA................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................TAGCCGATTGGATCATGGAATGA............................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................AGCCGATTGGATCATGGAATGATTT............................................ 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................CAAGATGATTGTCAGTTCAGTTGTT................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.................................................TGTATGTATATCAGAAAGCAGAAATA............................................................................................................................................................................... 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................TGGATCATGGAATGATTTTACATCGGGGC................................. 29 3 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................TTGTCAGTTCAGTTGTTTTTAAAGTT....................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................TTGTCAGTTCAGTTATTTTTAAAGTTT...................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................CACTAAATTGTGGTATTCAGAGTCAAGA.................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0
........................................TATTTATTATGTATGTATATCAGAAAGC...................................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................TGTATATCAGAAAGCAGAAATATTATTA......................................................................................................................................................................... 28 1 1 1.00 1 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................AGCCGATGGGATCATGGAATGATTT............................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................ATGGAATGATTTTTCATCTGGGCCGTT............................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................TTGTGGTATTCAGAGTCAAGATGAT................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..............TATTGAGCCCGAAAGATATACGTGCA.................................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................TGGGATCATGGAATGATT............................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................TTAGCCGATTGGATCATGGAATGATTT............................................ 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TTTAGCCGATTGGATCATGGAATGATTT............................................ 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................TTTACATCTGGGCCGTTTTTAAGCT..................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0
.............................................................................................................................TAAATTGTGGCATTCAGAGTCAAGA.................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................TGTGGTATTCAGAGTCAAGATGA................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................TATACGGACATATTTATTAT........................................................................................................................................................................................................ 20 2 5 0.60 3 0 0 0 0 0 2 1 0 0
..............................................................................................................................................................AGTTCAGTAGTTTTTAAA.......................................................................... 18 1 2 0.50 1 1 0 0 0 0 0 0 0 0
..............................TATACGGGTATATTTATTAT........................................................................................................................................................................................................ 20 2 4 0.50 2 0 0 0 0 0 0 1 1 0
..............................................................................................................................................................AGTTCAGTAGTTTTTAA........................................................................... 17 1 4 0.50 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................ATGATTTTTTAGGTGGGCCGTTT............................ 23 3 4 0.25 1 0 0 0 0 0 0 0 0 1
..............................................................................................................................................................AGTTCAGTAGTTTTAAAA.......................................................................... 18 2 20 0.10 2 1 0 0 0 1 0 0 0 0
..............................................................................................................................................................AGTTCAGTAGTTTTT............................................................................. 15 1 20 0.10 2 0 0 0 0 2 0 0 0 0
...................................................................................................................................................................AGTTGTTTTCAAAGTT....................................................................... 16 1 20 0.05 1 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

ACAGTTATTTTGTAATAACTCGGGCTTTCTATATGCACGTATAAATAATACATACATATAGTATTTCGTCTTTATAATAATATGTACGAATGTATGCACGTATATACGTTAACGTACTCTTTGTGATTTAACACCATAAGTCTCAGTTCTACTAACAGTCAAGTCAACAAAAATTTCAAAATCGGCTACCCTAGTACCTTACTAAAAAGTAGACCCGGCAAAAATTCGAGATAGGTTTAAGTCACGACTT
*****************************************************************************************....((((((((.((((...(((......)))...))))..))......))))))....****************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M024
male body		 M025
embryo
.......................................................................................................................................................................................................................CGGCAAAAATTCGAGATAGGTTTAAGT........ 27 0 1 5.00 5 2 0 0 1 2 0 0 0 0
......................................................................................................................................................................................CGGCTAACCTAGTACCTTACTAAAAT.......................................... 26 2 1 5.00 5 3 0 0 0 0 2 0 0 0
......................................................................................................................................................................................................................CCGGCAAAAATTCGAGATAGGTTTAAGT........ 28 0 1 3.00 3 2 0 0 0 0 1 0 0 0
..................................................................................................................................................................................................................AGACCCGGCAAAAATTCGAGATAGGT.............. 26 0 1 3.00 3 1 0 0 0 1 1 0 0 0
.................................................................................................................................................................................................................................TCGAGATAGGTTTAAGTCACGACT. 24 0 1 2.00 2 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................TCGGCTACCCTAGTACCTTAC................................................ 21 0 1 2.00 2 0 0 2 0 0 0 0 0 0
......................................................................................................................................................................................CGGCTAACCTAGTACCTTACTAAAATGT........................................ 28 2 1 2.00 2 1 0 0 1 0 0 0 0 0
....................................................................................................................................................................................ATCGGCTAACCTAGTACCTTACTAAAA........................................... 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0
.................................................................................................................................AACACCATAAGTCTCAGTTCTACTAA............................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................AGACCCGGCAAAAATTCGAGATAGGTT............. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................ATCGGCTACCCTAGTACCTTA................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................................CGGCTAACCTAGTACCTTACTAAA............................................ 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................CTAACAGTCAAGTCAATAAAAATTT.......................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................ATAGACCCGGCAAAAATTCGAGATAGGT.............. 28 1 1 1.00 1 0 0 0 0 1 0 0 0 0
.........................................................................................................................................AAGTCCCAGTTCTACTAACAGTCA......................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................CCGGCTACCCTAGTACCTTAC................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................GGCAAAAATTCGAGATAGGTT............. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................TTCAAAATCGGCTAACCTAGTACCT................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................AAACATTTCAAAATCGGCTAGTCT.......................................................... 24 3 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................CACCATAAGTCTCAGTTCTACTAACAGT........................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0
.........................................................................................ATGTATACACGTATATACGTTAACGT....................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................TTCTATATGCACGTATAAATAATACAT..................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................AAAAATTCGAGATAGGTTTAAGTCAC..... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GACCCGGCAAAAATTCGAGATAGGT.............. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................................ACTAACAGTCAAGTCAATAAAAATTT.......................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................TTAACACCATAAGTCTCAGTTCT.................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................AAAATGTAGACCCGGCAAAAATTCGAGAT.................. 29 1 1 1.00 1 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................GGCAAAAATTCGAGATAGGTTTAAGT........ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CCGGCAAAAATTCGAGATAGGTT............. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....TATTTTGTAATAACTCGGGCT................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................CAATAAAAATTTCAAAATCGGCTAAC............................................................ 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AGACCCGGCAAAAATTCGAGATAGGTTT............ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TTCGAGATAGGTTTAAGTCAC..... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.......................................................................................................ATACGTTAACGTACTCTTTGTGAT........................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................ATACGTTAACGTACTCTTTGTGATT.......................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0
.............................................................................................................................................CTCAGTTCTACTAACAGTCAAGTCAAT.................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GACCCGGCAAAAATTCGAGATAGGTTT............ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................AACATTTCAAAATCGGCTAGTCT.......................................................... 23 3 2 0.50 1 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................AAAAAGTCGAGATAGGT.............. 17 1 3 0.33 1 0 0 0 0 0 1 0 0 0
...............TAACTCGGGCCTTCGATACG....................................................................................................................................................................................................................... 20 3 3 0.33 1 0 0 0 0 0 0 1 0 0
...................TCTGGCTTTCTATGTGCCCG................................................................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 0 0 0 1
..........................................................................................TGTATGCACGTACACACATTA........................................................................................................................................... 21 3 20 0.05 1 0 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:2018555-2018804 + dsi_28053 TGTC--------AATAAAACATTATTGAGCCC-----GAAAG---ATATAC--GTGCATA--TTTATTATGTATGTATATCA--TAAAGCAGAAATATTATTATACATGCTTACATACGTGCATATATGCA------ATTGCATGAGAAACACTAAATTGTGGTATTCAGAGTCAAGATGATTGTC--AGTTCAGTTGTTTTTAAAGTTTTAGCCGATGGG---ATC-ATGGAATGATTTTTCATCT----GGGCCGTTTTTAAGCTCTATCCAAATTCAGTGCTGAA
droSec2 scaffold_111:68325-68574 + TGCC--------AATAAATCATTATTGAGCCC-----GAAAG---ATATAC--GTGCATA--TTTATTATGTATGTATATCA--TAGAGCAGAAATATTATTATACATGCTTACATACGTGCATATATGCA------ATTGCATGAGAAACACTAAATTGTGGTATTCAGAGTCAAGATGATTGTC--AGTTCAGTTATTTTTAAAGTTTTAGTCGATTGG---ATC-ATGGAATGATTTTTCGTCT----GGGCCGTTTTTAAGCTCTATCCAAATTCAGTGCTGAA
dm3 chr2R:978193-978440 + TGCC--------AATAAGGCATTGTTATGCCCGAAACACTAC---GTATAC--GTGCATA--TTTATCATGTATGTATATTA--TTAAGCAGT------AATATACACGCTTACATACGTACATACATGCA------ATTGCATGAGAAACACTAAATTGTGGCATTCAGGGTCAAGATGATTGTCACAGTTCAGTTATTTTTAAAGTTTTTGCCGATTAG---ATCTATGGAATGATTTTTCATCA----AGGCCGTTTTTAAGCTTTATCCAAATTCAGCCC----
droEre2 scaffold_4929:22676955-22677010 - CATT-------TT------------TCAAACC-----GAAAG---GCATAC--GAGTATA--TTCGTAATGTCCATGTTTTG--TTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chrUn_3788:1035-1121 + TTTT-------AT-----A---T-----------------AT---TTAT----TT-----------------------------TAAAATATATATATTTTTATCCATATTTTAAGGTATATATATGTATA------ATAAAACATCAAACACTCCATTGT-------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409034:17124-17208 - AATA--------AAT----------------------------------AT--ATATATA--TATATGATCTCCCTATACCTTAAAAAAAAAATATATATATATATATATGTATATATGTATATATATGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301739:15938-15947 + TGAT--------ATCAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000413504:7199-7237 + ACAT-------A---------------------------------------------------------------------------------------AACATACATACCTACATATATACATATATACA------AT-----------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000486927:1929-2007 + ATAT-------GC--------------------------------------------ATA--TCGTGTGTGCATGTATGTGT--AGATGAGGATATGTCACTATATATGTACACTTACGCATGTGTGTATA------ATT----------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000772135:64-130 - GAATTAAAAGGA--------TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAGTCGTTATACGCGTTCTGGCCAAAAAG---ATA-GTAGAATGTTTTTTCAACT-----------------------------------------
droKik1 scf7180000302707:606950-607044 - AATT-------AA-----G---CACTAAATCC-----GACAGTATA--TATATGTAAATA---------CGTATATACGTTT--TAA----------TTAATATACATACATACATACATACATACATACA------TATGTAT------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13250:2996466-2996552 - ATGT-------AT----------------------------------------ATGTATA--TGTATTGTATATGTATATGT--ATATGTATGTATATGTATATGTATATGTATATGTATATGTATATGTA------TATGTAT------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000392024:20147-20198 - TATT-----------------------------------------------------------------------------T--TGAAGAAGATATATAATAATATATATATATGTATTTACATATATACA-------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 Unknown_group_104:30032-30106 - TTCA----------------------------------TCAT---GCATAC--ATGCATA--C-------------------------------ATATGTATATACATACATATATACATATATGTATGTA------CTTTCA-AACAAACATT--------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_257:29123-29204 - TGTA--------TACC----ATTTTTGT---------TTTAT---TTAC----TTTAATATATTTATTATTTATTTATTCAA--CTATAC--------------------------------ATATATATTATTATATTTACTT------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004511:1651174-1651375 + AGTC--------AGCAGATC--------GTCC-----GACAA---ACAATT--GCAAACA--ACTGTCATGAGTCTCTACTA--TA-------------TACATACATACATACATATGTACATATATGTA------TGTATATGT---ACATTATTTTAAGAAATTTCC------------TGTA--TATTTGATTGTGTATAAAGTAAAGGT----TTGATCATA-ATGAAATATTTATTTAAACAACAAGTCA----------AATATCCAA-----AAGTTCAA
droVir3 scaffold_12954:916768-916848 + ATGT-------AT-----G---T-----------------AT---GTAT----GT----A--TG---TATGTATGTATGTAT--GTATGCATGTATGCATGTATGCATGTATGCATGTATGCATGTATGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6473:8889338-8889449 - TGTATTAAATCA--------AATATAAAACTT-----AAATACATA--TTTATAT----A--TA-----TATATATACATAA--TTACATAG--------TTATATACGA---CAGACATATATAAATATATA----TATATATAAATAATACTA-------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGTC--------AATAAAACATTATTGAGCCC-----GAAAG---ATATAC--GTGCATA--TTTATTATGTATGTATATCA--TAAAGCAGAAATATTATTATACATGCTTACATACGTGCATATATGCA------ATTGCATGAGAAACACTAAATTGTGGTATTCAGAGTCAAGATGATTGTC--AGTTCAGTTGTTTTTAAAGTTTTAGCCGATGGG---ATC-ATGGAATGATTTTTCATCT----GGGCCGTTTTTAAGCTCTATCCAAATTCAGTGCTGAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................TATTCAGAGTCAAGATGATTGTC--AGT.................................................................................................26110.001000000022510000000
.........................................................................................................................................................TAAATTGTGGTATTCAGAGTCAAGA..............................................................................................................2518.00800000021005000000
...............................................................................................................................................TGAGAAACACTAAATTGTGGTATTCAGA.....................................................................................................................2816.00600000010410000000
...................................................................................................................................................................TATTCAGAGTCAAGATGATTGTC--AGTT................................................................................................2714.00400000003010000000
........................................................................................................................................................................AGAGTCAAGATGATTGTC--AGTTCAGT............................................................................................2613.00300100001001000000
......................................................................................................................................................................TCAGAGTCAAGATGATTGTC--AGTTCAGT............................................................................................2813.00300000011100000000
.........................TGAGCCC-----GAAAG---ATATAC--GTGCATA--TTT...............................................................................................................................................................................................................................2812.00200000000020000000
.......................................................................................................................................................ACTAAATTGTGGTATTCAGAGTCAAGA..............................................................................................................2712.00200000011000000000
........................................................................................................................................................................................................................ATGGG---ATC-ATGGAATGATTT................................................2012.00200000000002000000
...........................................................................................................................................TGCATGAGAAACACTAAATTGTGGTA...........................................................................................................................2612.00200000001010000000
........................................................................................................................................................CTAAATTGTGGTATTCAGAGTCAAGA..............................................................................................................2612.00200000020000000000
.....................................................................................................................................................................................................................................TGGAATGATTTTTCATCT----GG...................................2012.00200000000002000000
.....................TTATTGAGCCC-----GAAAG---ATATAC--GTGCA......................................................................................................................................................................................................................................2711.00100000000010000000
......................................................................................................................................................................................................................................GGAATGATTTTTCATCT----G....................................1811.00101000000000000000
...............................................................................................................................................................................AGATGATTGTC--AGTT................................................................................................1511.00100000000001000000
............................................................................................................................ATATGCA------ATTGCATGAGAAACACTA.....................................................................................................................................2511.00100000000010000000
...................................................................................................................................................................................................................AGCCGATGGG---ATC-ATGGAAT.....................................................2011.00100000000001000000
............................................................................................................................................................ATTGTGGTATTCAGAGTCAAGATGAT..........................................................................................................2611.00100000000001000000
....................................................................................................................................................................ATTCAGAGTCAAGATGATTGTC--....................................................................................................2211.00101000000000000000
............................................................................................................................................................ATTGTGGTATTCAGAGTC..................................................................................................................1811.00100000000001000000
....................ATTATTGAGCCC-----GAAAG---ATATAC--GTGC.......................................................................................................................................................................................................................................2711.00100000010000000000
...................................................................................................................TACGTGCATATATGCA------AT.....................................................................................................................................................1811.00100000000001000000
..................................................................................................................................................................................................................TAGCCGATGGG---ATC-ATGGAATGATTT................................................2611.00100000000001000000
....................................................................................................................................................................................................................GCCGATGGG---ATC-ATGGAATGATTTT...............................................2511.00100010000000000000
....................................................................................................................................................................ATTCAGAGTCAAGATGATTGTC--AGT.................................................................................................2511.00100000000010000000
.................................................................................................................................................................................................................................TC-ATGGAATGATTTTTCATCT----GGG..................................2411.00100000000001000000
..........................................................................................................................................................................................................................................................................TCTATCCAAATTCAGTGCTGA.2111.00101000000000000000
.........................TGAGCCC-----GAAAG---ATATAC--GTGCATA--T.................................................................................................................................................................................................................................2611.00100000000001000000
.................................................................................................................................................................................................................TTAGCCGATGGG---ATC-............................................................1511.00100000000001000000
....................................................................................................................................................................ATTCAGAGTCAAGATGATTGTC--AGTTC...............................................................................................2711.00100000001000000000
.............................................................................................................................TATGCA------ATTGCATGAGAAACACTAAATT.................................................................................................................................2811.00100000000100000000
.....................TTATTGAGCCC-----GAAAG---ATATAC--GT.........................................................................................................................................................................................................................................2411.00100000000001000000
...................................................................................................................................................................TATTCAGAGTCAAGATGATTGTC--A...................................................................................................2411.00100000000010000000
.............................................................................................................................................................TTGTGGTATTCAGAGTCAAGATGA...........................................................................................................2411.00100000000001000000
.............................................................................................................................................................................CAAGATGATTGTC--AGTTCAGTTGTT........................................................................................2511.00100000000001000000
.....................................................................................................................................................................................TTGTC--AGTTCAGTTGTTTTTAAAGTT...............................................................................2611.00100000000001000000
......................................................................................................................................................CACTAAATTGTGGTATTCAGAGTCAAGA..............................................................................................................2811.00100000010000000000
...................................................................................................................................................................................................................AGCCGATGGG---ATC-ATGGAATGATTT................................................2511.00100000000001000000
....................................................................................................................................................................................................................................ATGGAATGATTTTTCATCT----GGGCCGTT.............................2711.00100000000001000000
.............................................................................................................................................................TTGTGGTATTCAGAGTCAAGATGAT..........................................................................................................2511.00100000000001000000
......................TATTGAGCCC-----GAAAG---ATATAC--GTGCA......................................................................................................................................................................................................................................2611.00100000000010000000
.........................................................................................................................................................................................................................TGGG---ATC-ATGGAATGATT.................................................1811.00100000000001000000
..............................................................................................................................................................TGTGGTATTCAGAGTCAAGATGA...........................................................................................................2311.00100000000001000000
droSec2
TGCC--------AATAAATCATTATTGAGCCC-----GAAAG---ATATAC--GTGCATA--TTTATTATGTATGTATATCA--TAGAGCAGAAATATTATTATACATGCTTACATACGTGCATATATGCA------ATTGCATGAGAAACACTAAATTGTGGTATTCAGAGTCAAGATGATTGTC--AGTTCAGTTATTTTTAAAGTTTTAGTCGATTGG---ATC-ATGGAATGATTTTTCGTCT----GGGCCGTTTTTAAGCTCTATCCAAATTCAGTGCTGAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................TCAGTTATTTTTAAAGTTTTAGTCGA.......................................................................2611.0010010
..................................................................................................................................................................GTATTCAGAGTCAAGATGAT..........................................................................................................2011.0010010
.................................................................................................................................................................................................................TTAGTCGATTGG---ATC-ATGGAATGAT..................................................2511.0010010
..........................GAGCCC-----GAAAG---ATATAC--GT.........................................................................................................................................................................................................................................1911.0010100
...........................................................................................................TGCTTACATACGTGCATATATGCA------AT.....................................................................................................................................................2611.0011000
dm3
TGCC--------AATAAGGCATTGTTATGCCCGAAACACTAC---GTATAC--GTGCATA--TTTATCATGTATGTATATTA--TTAAGCAGT------AATATACACGCTTACATACGTACATACATGCA------ATTGCATGAGAAACACTAAATTGTGGCATTCAGGGTCAAGATGATTGTCACAGTTCAGTTATTTTTAAAGTTTTTGCCGATTAG---ATCTATGGAATGATTTTTCATCA----AGGCCGTTTTTAAGCTTTATCCAAATTCAGCCC----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................GATTAG---ATCTATGGAATGAT..................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000010000000000000000
........................................................................................................................................................................................................................ATTAG---ATCTATGGAATGAT..................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000010000000
............................................................................................................................................................ATTGTGGCATTCAGGGTCAAGATGAT..........................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000
............................................................................................................................................................................TCAAGATGATTGTCACAGT.................................................................................................1912.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................ATTGTCACAGTTCAGTTATTTTT.....................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................GCCGATTAG---ATCTATGGAA......................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................TTGTGGCATTCAGGGTCAAGATGATTG........................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000
.........................................................................................................................................................TAAATTGTGGCATTCAGGGTCAAGAT.............................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................TGCCGATTAG---ATCTATGGAATGATT.................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................A------ATTGCATGAGAAACACTA.....................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
..........................................................................................................................................................AAATTGTGGCATTCAGGGTCAAGAT.............................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000
.....................................................................................................................................................................TTCAGGGTCAAGATGATTGTCACAGT.................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................TTGTGGCATTCAGGGTCAAGATGAT..........................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................TTGTGGCATTCAGGGTCAAGATGA...........................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................TTGCCGATTAG---ATCTATGGAA......................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.........................................................................................................................................................................................................................TTAG---ATCTATGGAATGATT.................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................AGGGTCAAGATGATTGTC......................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................TTGCCGATTAG---ATCTATGGAATGATT.................................................2611.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GTTATGCCCGAAACACTAC---...................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TTCAGGGTCAAGATGATT.........................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................AGGGTCAAGATGATTGTCACAGTTCAG.............................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
............................GCCCGAAACACTAC---GTATAC--GTGCA......................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................CAGGGTCAAGATGATTGTCACAGT.................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TTGTCACAGTTCAGTTATTTT......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TGTCACAGTTCAGTTATTTTTAAAGG................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................CAGGGTCAAGATGATTGTCACAGTT................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TGTGGCATTCAGGGTCAAGATGAT..........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................TTTTGCCGATTAG---ATCTATGG........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TAAATTGTGGCATTCAGGGT...................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................TCTATGGAATGATTTTTCATCA----AGGCCGT..............................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................GCATTCAGGGTCAAGATGA...........................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................ACTAC---GTATAC--GTGCATA--T.................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................ATTAG---ATCTATGGAATGA...................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................ATGATTTTTCATCA----AGGCCGTTTTTAAGC......................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CGATTAG---ATCTATGGAATGATT.................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TTTTTGCCGATTAG---ATCTATG.........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................ATTCAGGGTCAAGATGATTGT.......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TTTTTCATCA----AGGCCGTTTTT..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TAG---ATCTATGGAATGATTTTTCATC..........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................TTGTCACAGTTCAGTTATTTTT.....................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................GATTTTTCATCA----AGGCCGT..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................ACTAAATTGTGGCATTCAGGG....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATGCCCGAAACACTAC---GTA................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................TTTTGCCGATTAG---ATCTATGGAA......................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................ATTAG---ATCTATGGAATGATTTTTCAT...........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TCAGGGTCAAGATGATTGTCACAGT.................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................CTATGGAATGATTTTTCATCA----AGGC.................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TCAGGGTCAAGATGATTGTCAC....................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................TTTCATCA----AGGCCGTTTTTAA........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TTCAGGGTCAAGATGATTGTCAC....................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................GTGGCATTCAGGGTCAAGATG............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................................................................................................................................................................................................GTTTTTGCCGATTAG---ATCTAT..........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................A----AGGCCGTTTTTAAGCTT....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TAAATTGTGGCATTCAGGGTCAAGA..............................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................ATTCAGGGTCAAGATGATTGTC......................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................TTA--TTAAGCAGT------AATATACACGCT.................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................TTGCCGATTAG---ATCTATGGAATGAT..................................................2511.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................GGCATTCAGGGTCAAGATGAT..........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................TTAG---ATCTATGGAATGATTTTTCATC..........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................GGCATTCAGGGTCAAGATGATTG........................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TTTTTGCCGATTAG---ATCTATGGAA......................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TTCAGGGTCAAGATGATTGTCA.....................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................ATTAG---ATCTATGGAATGATTTTT..............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................AGTTTTTGCCGATTAG---ATCTA...........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................CAGGGTCAAGATGATTGTC......................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................................................................................CTATGGAATGATTTTTCATC..........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................ATTCAGGGTCAAGATGATTG........................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
........................................................................................................................................................CTAAATTGTGGCATTCAGGGTT..................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TTCAGGGTCAAGATGATTGTC......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................TTTTGCCGATTAG---ATCTATGGAATGAT..................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................ATTCAGGGTCAAGATGATTGTCACAGTT................................................................................................2811.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GATTAG---ATCTATGGAATGATTTTTCA............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................................................................................................ATTTTTCATCA----AGGCCGTTTT...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TTTGCCGATTAG---ATCTATGGAATGA...................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................ATTCAGGGTCAAGATGATTGTCA.....................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................AAATTGTGGCATTCAGGGTCAAGATGA...........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.................................................................................................................................................................................................................TTTGCCGATTAG---ATCTATGGAATGAT..................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ATAAGGCATTGTTATGCC.................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................CACGCTTACATACGTACATACATGCA------.......................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................ATTAG---ATCTATGGAATGATT.................................................2011.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TCAAGATGATTGTCACAGTTC...............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................GCCGATTAG---ATCTATGGAG......................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TACATACGTACATACATGCA------AT.....................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
...................................................................................................................................................................................................TTATTTTTAAAGTTTTTA...........................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CATT-------TT------------TCAAACC-----GAAAG---GCATAC--GAGTATA--TTCGTAATGTCCATGTTTTG--TTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..TT-------TT------------TCAAACC-----GAAAG---GCATAC--GAGTA......................................................................................................................................................................................................................................27200.0511000000
........................................................TATA--TTCGTAATGTCCATG...................................................................................................................................................................................................................19200.0510001000
droYak3
TTTT-------AT-----A---T-----------------AT---TTAT----TT-----------------------------TAAAATATATATATTTTTATCCATATTTTAAGGTATATATATGTATA------ATAAAACATCAAACACTCCATTGT-------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
AATA--------AAT----------------------------------AT--ATATATA--TATATGATCTCCCTATACCTTAAAAAAAAAATATATATATATATATATGTATATATGTATATATATGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TGAT--------ATCAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ACAT-------A---------------------------------------------------------------------------------------AACATACATACCTACATATATACATATATACA------AT-----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ATAT-------GC--------------------------------------------ATA--TCGTGTGTGCATGTATGTGT--AGATGAGGATATGTCACTATATATGTACACTTACGCATGTGTGTATA------ATT----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GAATTAAAAGGA--------TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAGTCGTTATACGCGTTCTGGCCAAAAAG---ATA-GTAGAATGTTTTTTCAACT-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AATT-------AA-----G---CACTAAATCC-----GACAGTATA--TATATGTAAATA---------CGTATATACGTTT--TAA----------TTAATATACATACATACATACATACATACATACA------TATGTAT------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
ATGT-------AT----------------------------------------ATGTATA--TGTATTGTATATGTATATGT--ATATGTATGTATATGTATATGTATATGTATATGTATATGTATATGTA------TATGTAT------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TATT-----------------------------------------------------------------------------T--TGAAGAAGATATATAATAATATATATATATGTATTTACATATATACA-------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
TTCA----------------------------------TCAT---GCATAC--ATGCATA--C-------------------------------ATATGTATATACATACATATATACATATATGTATGTA------CTTTCA-AACAAACATT--------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TGTA--------TACC----ATTTTTGT---------TTTAT---TTAC----TTTAATATATTTATTATTTATTTATTCAA--CTATAC--------------------------------ATATATATTATTATATTTACTT------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
AGTC--------AGCAGATC--------GTCC-----GACAA---ACAATT--GCAAACA--ACTGTCATGAGTCTCTACTA--TA-------------TACATACATACATACATATGTACATATATGTA------TGTATATGT---ACATTATTTTAAGAAATTTCC------------TGTA--TATTTGATTGTGTATAAAGTAAAGGT----TTGATCATA-ATGAAATATTTATTTAAACAACAAGTCA----------AATATCCAA-----AAGTTCAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................ACTA--TA-------------TACATACATACATACA.............................................................................................................................................................................22120.42503020
............................................................................CTACTA--TA-------------TACATACATACAT................................................................................................................................................................................2160.17101000
.......................................................................................................TACATACATACATATGTACATATATGT..............................................................................................................................................................27100.10100010
..............................................................................ACTA--TA-------------TACATACATACATA...............................................................................................................................................................................20200.05101000
................................................................................TA--TA-------------TACATACATACATACATATGT........................................................................................................................................................................25200.05101000
..................................................................................................................ATATGTACATATATGTA------TGT....................................................................................................................................................20200.05100010
droVir3
ATGT-------AT-----G---T-----------------AT---GTAT----GT----A--TG---TATGTATGTATGTAT--GTATGCATGTATGCATGTATGCATGTATGCATGTATGCATGTATGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................T-----------------AT---GTAT----GT----A--TG---TATGTATGT....................................................................................................................................................................................................................21200.153000000000000000000000000000000030000000000000000000000000000000
...................................................................TATGTATGTATGTAT--GTATGC......................................................................................................................................................................................................21200.102000000000000000000000000000002000000000000000000000000000000000
...........................................................................TATGTAT--GTATGCATGTATGC..............................................................................................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
........................................AT---GTAT----GT----A--TG---TATGTATGT....................................................................................................................................................................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
droMoj3
TGTATTAAATCA--------AATATAAAACTT-----AAATACATA--TTTATAT----A--TA-----TATATATACATAA--TTACATAG--------TTATATACGA---CAGACATATATAAATATATA----TATATATAAATAATACTA-------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads

Generated: 05/18/2015 at 05:04 PM