ID:dsi_27968 |
Coordinate:2r:4972390-4972479 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -3.87 | -3.77 | -3.7 |
 |
 |
 |
exon [2r_4971957_4972389_-]; CDS [2r_4971957_4972389_-]; CDS [2r_4972480_4972698_-]; exon [2r_4972480_4972698_-]; intron [2r_4972390_4972479_-]
No Repeatable elements found
| ##################################################------------------------------------------------------------------------------------------################################################## TGAAGGCACCCAGTAATCACGTTATCTATTTGAGCTGTCGCTTTGAGTTGGTAAGTACTGTTCTAGAATATAAGCCATAATTAAAATAATACTTTAAATCCTATATCTAGCTTATAAAACATTGATTCCGTTCTAATTAGTTTCCCGACACCTGTGGCTCGGAGTTTCTGTTCATATCCCGCGATGGCGA **************************************************.............((((((((((((..................................))))))..............)))))).....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | O002 Head |
SRR618934 dsim w501 ovaries |
GSM343915 embryo |
SRR553487 NRT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................GCCATCGCTTTGAGTTGGTA......................................................................................................................................... | 20 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .....................................................................................................TATATCTAGCTTATAAAAC...................................................................... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....GGCACCCAGTAATCACGTT....................................................................................................................................................................... | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ....................................................................................................................................................GACCTGTGGATCGGAGT......................... | 17 | 2 | 8 | 0.88 | 7 | 0 | 0 | 0 | 3 | 3 | 1 |
| .....................................................................................................................................................ACCTGTGGATCGGAGT......................... | 16 | 1 | 4 | 0.25 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| .....................................................................................................................................................ACCTGTGGATCGGAG.......................... | 15 | 1 | 10 | 0.10 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...................................................................................................CCTCTATCAAGCTTATA.......................................................................... | 17 | 2 | 14 | 0.07 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
|
ACTTCCGTGGGTCATTAGTGCAATAGATAAACTCGACAGCGAAACTCAACCATTCATGACAAGATCTTATATTCGGTATTAATTTTATTATGAAATTTAGGATATAGATCGAATATTTTGTAACTAAGGCAAGATTAATCAAAGGGCTGTGGACACCGAGCCTCAAAGACAAGTATAGGGCGCTACCGCT
**************************************************.............((((((((((((..................................))))))..............)))))).....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553488 RT_0-2 hours eggs |
M023 head |
|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................AGGGCTGTGGACACCGAGCCT........................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................................................................................................GACCGAGCCTCAAAGACAAGTAGAG............ | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................CTCGACCGCGAATCTCAA............................................................................................................................................. | 18 | 2 | 6 | 0.17 | 1 | 1 | 0 | 0 |
| ...............................................................................................TTAAGAATATAGATCGAAGAT.......................................................................... | 21 | 3 | 9 | 0.11 | 1 | 0 | 1 | 0 |
| ....CAGTGTGTCACTAGTGCA........................................................................................................................................................................ | 18 | 3 | 20 | 0.10 | 2 | 0 | 0 | 2 |
| ...............................................................................................................................................................GCCTCAAGGACATCTATAG............ | 19 | 3 | 20 | 0.05 | 1 | 0 | 1 | 0 |
Generated: 04/23/2015 at 09:08 AM