ID:

dsi_27876

 Coordinate:

3l:22625087-22625236 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.0 -10.0 -9.5

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
Gypsy4-LTR_DyaLTRGypsy-
mature
  1. 2l:22562744-22562772 +
  2. 2l:22622471-22622499 +
  3. 2l:22687191-22687219 +
  4. 2l:22743399-22743427 +
  5. 2l:22978795-22978823 +
  6. 2r:198329-198357 +
  7. 2r:444188-444216 +
  8. 2r:1515878-1515906 +
  9. 2r:2230860-2230888 +
  10. 3l:24006021-24006049 +
  11. x:14451260-14451288 +
  12. node_98929:2279-2307 +
  13. node_23397:21-49 +
  14. node_76011:9353-9381 +
  15. node_116027:4560-4588 +
  16. node_66608:66-94 +
  17. node_65711:149-177 +
  18. node_48910:3-31 +
  19. node_76993:2692-2720 +
  20. node_83430:4810-4838 +
  21. 2l:22846759-22846787 +
  22. 2l:23279953-23279981 +
  23. dsi_27876  3l:22625142-22625170 +
  24. 3l:22675413-22675441 +
  25. 3l:22740667-22740695 +
  26. 3l:24240195-24240223 +
  27. 2l:16461064-16461092 +
  28. 2l:20583005-20583033 +
  29. node_76688:1500-1528 +
  30. node_43976:277-305 +
  31. 2l:22405948-22405976 -
  32. 2l:22822395-22822423 -
  33. 2l:23255589-23255617 -
  34. 2l:23502470-23502498 -
  35. 2r:4750-4778 -
  36. 2r:419824-419852 -
  37. 2r:532766-532794 -
  38. 2r:1447056-1447084 -
  39. 2r:1957546-1957574 -
  40. 2r:2275136-2275164 -
  41. 3l:23754305-23754333 -
  42. x:20178669-20178697 -
  43. node_13788:1462-1490 -
  44. node_46586:647-675 -
  45. node_114267:9-37 -
  46. node_85611:690-718 -
  47. node_57944:21510-21538 -
  48. node_23651:90-118 -
  49. node_50237:177-205 -
  50. node_65098:121-149 -
star
  1. 2l:16461106-16461130 +
  2. dsi_27876  3l:22625191-22625215 +
  3. 3l:22675462-22675486 +
  4. 3l:22740716-22740740 +
  5. x:14451309-14451333 +
  6. node_106887:37-61 -
  7. node_50237:132-156 -
  8. node_83430:4859-4883 +

Sense Strand Reads

GTCTTGATACGGTAAATGTAGTGTAACGAACTGATTTTCTTTATTTCGCTCGCTACTGGTTGCAGCGGCAAGATCAGAGAGTTTGTGTGTTTGTCCCACCAAATTTATGATTTGTGTGATTGCCCGACCAAGGAAACGCAATAGGTTCTTGATATAGTCGTTTATTATGCTATTTCTCATATAAGAAATAATCCTCCTAGGGAATTATGGAGATCTCGCTACTCCTGCGGCACTCCTGTTGCAACGCCTT
*********************************************************************************************************...((...(((((((....((((((((((...........)))))).....))))...)))))))....))...*********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 M053
female body
 M025
embryo
 O002
Head
 GSM343915
embryo
 M024
male body		 M023
head
.........................................................................................................TATGATTTGTGTGATTGCCCGACCAAGGA.................................................................................................................... 29 0 20 867.95 17359 16556 0 0 0 803 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGACCA........................................................................................................................ 25 0 20 454.30 9086 0 8527 559 0 0 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGCTACTGGTTGCAG......................................................................................................................................................................................... 25 0 20 358.00 7160 1322 2063 307 1939 1011 16 157 12 61 261 0 6 4 1
...............................................................................................................................................................................................................TGGAGATCTCGCTACTTCTGCGGCAC................. 26 1 6 315.83 1895 0 0 1863 0 0 0 0 32 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGACC......................................................................................................................... 24 0 20 295.20 5904 2710 0 378 2735 0 0 0 0 0 0 55 20 6 0
.........................................................................................................TATGATTTGTGTGATTGCCCGAC.......................................................................................................................... 23 0 20 187.65 3753 967 0 1028 0 1051 560 0 147 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGA........................................................................................................................... 22 0 20 68.95 1379 0 0 0 0 410 855 0 0 0 0 114 0 0 0
........................................TTATTTCGCTCGGTACTGGTTGC........................................................................................................................................................................................... 23 1 20 68.15 1363 542 686 0 0 135 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGGTACTGGTTGCAGC........................................................................................................................................................................................ 26 1 20 68.00 1360 458 496 0 287 119 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGCTACTGGTTGCAGC........................................................................................................................................................................................ 26 0 20 63.95 1279 414 303 11 263 163 0 51 0 66 5 0 3 0 0
........................................TTATTTCGCTCGGTACTGGTTGCA.......................................................................................................................................................................................... 24 1 20 57.70 1154 245 408 0 318 183 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGCTACTGGTTGCA.......................................................................................................................................................................................... 24 0 20 54.05 1081 0 334 144 246 217 32 61 0 38 7 0 2 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGACCAA....................................................................................................................... 26 0 20 52.30 1046 0 362 0 433 0 0 0 8 140 0 102 1 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGACCAAG...................................................................................................................... 27 0 20 51.25 1025 0 0 0 592 432 0 0 0 0 0 0 1 0 0
........................................TTATTTCGCTCGCTACTGGTTGC........................................................................................................................................................................................... 23 0 20 48.85 977 221 208 13 254 85 64 79 2 13 22 0 16 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTCCTGCGGCAC................. 26 0 6 48.67 292 5 8 251 6 6 0 6 5 5 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTTCTGCGGCA.................. 25 1 6 44.50 267 0 0 260 0 0 0 0 7 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCG............................................................................................................................ 21 0 20 43.50 870 0 0 14 55 40 708 53 0 0 0 0 0 0 0
.......................................TTTATTTCGCTCGCTACTGGTTGCAG......................................................................................................................................................................................... 26 0 20 39.05 781 250 163 28 204 59 0 14 1 5 55 0 0 2 0
.........................................................................................................TATGATTTGTGTGATTGCCCGACCAAGG..................................................................................................................... 28 0 20 38.50 770 0 647 23 0 67 0 0 0 33 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTCCTGCGGCACTC............... 28 0 6 37.83 227 0 0 217 1 2 0 3 3 1 0 0 0 0 0
..................................................................................................................................................................................................TCCTAGGGAATTATGGAGATCTCGC............................... 25 0 7 34.29 240 16 12 163 21 25 0 1 2 0 0 0 0 0 0
........................................TTATTTCGCTCGGTACTGGTTGCAG......................................................................................................................................................................................... 25 1 20 24.30 486 123 176 0 115 72 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTTCTGCGGCAA................. 26 2 6 23.67 142 0 0 134 0 0 0 0 8 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGACCAAGGAA................................................................................................................... 30 0 20 23.55 471 154 234 0 67 16 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTTCTGCGGCACT................ 27 1 6 23.17 139 0 0 135 0 0 0 0 4 0 0 0 0 0 0
..........................................................................................................................................................TAGTCGTTTATTATGCTATTTCTCA....................................................................... 25 0 8 21.38 171 37 55 7 25 39 0 0 0 8 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTCCTGCGGCACT................ 27 0 6 19.50 117 13 17 60 10 14 0 3 0 0 0 0 0 0 0
.......................................TTTATTTCGCTCGGTACTGGTTGC........................................................................................................................................................................................... 24 1 20 19.20 384 194 121 0 53 16 0 0 0 0 0 0 0 0 0
.......................................TTTATTTCGCTCGCTACTGGTTGC........................................................................................................................................................................................... 24 0 20 16.05 321 192 0 4 73 17 0 24 0 2 4 0 5 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTTCTGCGGC................... 24 1 6 15.33 92 1 1 89 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTTCTGCGGCACTC............... 28 1 6 14.67 88 0 0 87 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTCCTGCGGC................... 24 0 6 14.50 87 21 13 4 26 15 0 5 0 1 0 0 2 0 0
.........................................................................................................TATGATTTGTGTGATT................................................................................................................................. 16 0 20 13.10 262 0 0 0 9 0 0 253 0 0 0 0 0 0 0
........................................TTATTTCGCTCGCTACTGGTTGCAT......................................................................................................................................................................................... 25 1 20 11.75 235 2 1 162 0 2 0 2 66 0 0 0 0 0 0
........................................TTATTTCGCTCGCTACTGGTTG............................................................................................................................................................................................ 22 0 20 11.70 234 29 23 80 21 17 0 42 15 5 0 0 2 0 0
........................................TTATTTCGCTCGGTACTGGTTG............................................................................................................................................................................................ 22 1 20 10.40 208 50 68 0 60 30 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTCCTGCGGCA.................. 25 0 6 10.17 61 10 8 28 2 11 0 1 1 0 0 0 0 0 0
.......................................TTTATTTCGCTCGCTACTGGTTGCAGC........................................................................................................................................................................................ 27 0 20 10.10 202 97 35 3 33 22 0 5 0 5 1 0 0 1 0
.......................................TTTATTTCGCTCGGTACTGGTTGCAGC........................................................................................................................................................................................ 27 1 20 10.05 201 88 41 0 64 8 0 0 0 0 0 0 0 0 0
.......................................TTTATTTCGCTCGCTACTGGTTGCA.......................................................................................................................................................................................... 25 0 20 9.75 195 83 36 21 30 15 0 8 0 2 0 0 0 0 0
........................................TTATATCGCTCGCTACTGGTTGCAG......................................................................................................................................................................................... 25 1 20 9.65 193 0 0 186 0 0 0 0 7 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTTCTGCGGCACA................ 27 2 6 8.67 52 0 0 52 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TATGGAGATCTCGCTACTCCTGCGGC................... 26 0 6 8.00 48 12 12 1 8 7 0 8 0 0 0 0 0 0 0
........................................TTATTTCGCTCGCTACTGGTT............................................................................................................................................................................................. 21 0 20 7.75 155 17 21 31 30 14 0 25 14 1 2 0 0 0 0
..........................................................................................................................................................TAGTCGTTTATTATGCTATTTCTCATA..................................................................... 27 0 8 7.38 59 19 19 0 5 11 0 3 0 2 0 0 0 0 0
.......................................TTTATTTCGCTCGGTACTGGTTGCA.......................................................................................................................................................................................... 25 1 20 7.10 142 49 39 0 36 18 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ATGGAGATCTCGCTACTTCTGCGGCAC................. 27 1 6 6.67 40 0 0 40 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TATAAGAAATAATCCTCCTAGGGAATT............................................ 27 0 5 6.20 31 15 8 0 6 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TCCTCCTAGGGAATTATGGAGATCTCGC............................... 28 0 7 6.00 42 11 8 0 9 11 0 3 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TATGGAGATCTCGCTACTTCTGCGGC................... 26 1 6 4.50 27 0 0 27 0 0 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGCTACTGGT.............................................................................................................................................................................................. 20 0 20 4.10 82 7 8 7 10 7 16 12 6 0 8 0 0 1 0
.............................................................................................................................................................................................................TATGGAGATCTCGCTACTTCTGCGGCAC................. 28 1 6 4.00 24 0 0 24 0 0 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGCTACTGG............................................................................................................................................................................................... 19 0 20 3.90 78 4 1 17 4 1 32 6 13 0 0 0 0 0 0
.......................................TTTATTTCGCTCGGTACTGGTTGCAG......................................................................................................................................................................................... 26 1 20 3.65 73 28 19 0 18 8 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCC............................................................................................................................. 20 0 20 3.65 73 5 0 0 0 0 0 43 0 1 23 0 0 1 0
.........................................................................................................TATTATTTGTGTGATTGCCCGACCAAGGA.................................................................................................................... 29 1 20 3.60 72 0 72 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCCTAGGGAATTATGGAGATCTCGCT.............................. 26 0 7 3.43 24 8 7 3 5 1 0 0 0 0 0 0 0 0 0
.......................................TTTATTTCGCTCGCTACTGGTTG............................................................................................................................................................................................ 23 0 20 3.40 68 20 7 23 6 3 0 7 1 0 0 0 1 0 0
..................................................................GGCAAGATCAGAGAGTTTGTGTGTT............................................................................................................................................................... 25 0 3 3.33 10 2 0 0 7 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTTCTGCGGCACAA............... 28 3 6 3.00 18 0 0 18 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGACCAAT...................................................................................................................... 27 1 20 3.00 60 13 26 5 8 7 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................TCCTAGGGAACTATGGAGATCTCGCTA............................. 27 1 9 3.00 27 7 3 3 4 10 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGCTACT................................................................................................................................................................................................. 17 0 20 2.90 58 0 0 0 0 0 0 58 0 0 0 0 0 0 0
..........................................................................................................................................................TAGTCGTTTATTATGCT............................................................................... 17 0 8 2.88 23 0 0 0 3 11 0 9 0 0 0 0 0 0 0
........................................TTATATCGCTCGCTACTGGTTGCA.......................................................................................................................................................................................... 24 1 20 2.85 57 0 1 48 0 1 0 0 7 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTCCTGCGG.................... 23 0 6 2.67 16 1 1 1 4 4 0 4 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................TCTCGCTACTCCTGCGGCACTCCTGT........... 26 0 6 2.67 16 2 1 11 0 1 0 0 1 0 0 0 0 0 0
.......................................TTTATTTCGCTCGGTACTGGTTG............................................................................................................................................................................................ 23 1 20 2.65 53 29 14 0 7 3 0 0 0 0 0 0 0 0 0
........................................TTATATCGCTCGCTACTGGTTGCAT......................................................................................................................................................................................... 25 2 20 2.65 53 0 0 31 0 0 0 0 22 0 0 0 0 0 0
...........................................................................................................TGATTTGTGTGATTGCCCGACCAAGGA.................................................................................................................... 27 0 20 2.65 53 0 40 1 0 12 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTG................................................................................................................................ 17 0 20 2.55 51 0 0 0 3 0 0 48 0 0 0 0 0 0 0
........................................TTATTTCGCTCGCTACTGGTTGCAGA........................................................................................................................................................................................ 26 1 20 2.45 49 1 3 34 2 0 0 0 8 0 1 0 0 0 0
.....................TGTAACGAACTGATTTTCTTT................................................................................................................................................................................................................ 21 0 20 2.45 49 8 1 0 34 5 0 1 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGACCT........................................................................................................................ 25 1 20 2.40 48 43 0 0 0 0 3 1 0 1 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTCCTGCGGCACTCC.............. 29 0 6 2.33 14 0 0 13 0 0 0 0 1 0 0 0 0 0 0
........................................TTATTTCGCTCGGTACTGGTTGCAGCGGC..................................................................................................................................................................................... 29 1 20 2.25 45 24 18 0 1 2 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGGTACTGGTT............................................................................................................................................................................................. 21 1 20 2.25 45 11 17 0 0 17 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TAGGGAACTATGGAGATCTCGCTAC............................ 25 1 9 2.22 20 5 2 2 4 3 0 3 0 1 0 0 0 0 0
........................................TTATTTCGCTCGCTACTGGTTGCAA......................................................................................................................................................................................... 25 1 20 2.20 44 3 1 27 3 5 0 1 3 0 1 0 0 0 0
.......................................TTTATTTCGCTCGCTACTGGTT............................................................................................................................................................................................. 22 0 20 2.10 42 4 5 4 6 4 0 1 1 1 0 16 0 0 0
.............................................................................................................................................................................................................TATGGAGATCTCGCTACTTCTGCGGCA.................. 27 1 6 2.00 12 0 0 12 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TAGTCGTTTATTATGCTAT............................................................................. 19 0 8 2.00 16 0 0 0 0 0 16 0 0 0 0 0 0 0 0
.........................................................................................................GATGATTTGTGTGATTGCCCGACCAAGGA.................................................................................................................... 29 1 20 1.85 37 37 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TAAGAAATAATCCTCCTAGGGAATT............................................ 25 0 5 1.80 9 3 1 0 1 1 0 3 0 0 0 0 0 0 0
..............................................................................................................................................................................................ATCCTCCTAGGGAATTA........................................... 17 0 8 1.75 14 0 0 0 0 0 0 14 0 0 0 0 0 0 0
.............................................................................................................................................TAGGTTCTTGATATAGTCGTTTAT..................................................................................... 24 0 3 1.67 5 0 1 0 4 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GGAGATCTCGCTACTCCTGCGGCACTC............... 27 0 6 1.67 10 0 0 8 1 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTCCTGCGGCAA................. 26 1 6 1.67 10 0 0 9 1 0 0 0 0 0 0 0 0 0 0
....................................TTCTTTATTTCGCTCGCTACTG................................................................................................................................................................................................ 22 0 20 1.65 33 0 0 19 0 0 0 0 14 0 0 0 0 0 0
..........................................................................................................ATGATTTGTGTGATTGCCCGACCAAGGA.................................................................................................................... 28 0 20 1.65 33 33 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TCGCTACTCCTGCGGCACTCCTGT........... 24 0 6 1.50 9 0 1 3 1 0 0 2 1 0 0 0 1 0 0
..............................................................................................................................................................................................................ATGGAGATCTCGCTACTTCTGCGGC................... 25 1 6 1.50 9 0 0 9 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTCCTGCGGCACTCA.............. 29 1 6 1.50 9 0 0 9 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TTTGTGTGATTGCCCGACCAAGGA.................................................................................................................... 24 0 20 1.50 30 10 11 0 6 3 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTTCTGCGGCACTCC.............. 29 1 6 1.50 9 0 0 9 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCTACCAAGGA.................................................................................................................... 29 1 20 1.45 29 12 16 0 0 1 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGGTACTGGTTGCAGA........................................................................................................................................................................................ 26 2 20 1.45 29 11 14 0 4 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TCGCTACTCCTGCGGCAC................. 18 0 7 1.43 10 0 0 0 0 0 0 2 0 0 0 8 0 0 0
.....................................................................................................................................................................................TAAGAAATAATCCTCCTAGGGAATTA........................................... 26 0 5 1.40 7 0 0 0 2 2 0 2 0 1 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGT........................................................................................................................... 22 1 20 1.40 28 0 3 0 6 0 6 6 7 0 0 0 0 0 0
............................................................................................................................................................................................................TTATGGAGATCTCGCTACTTCTGCGGCA.................. 28 1 5 1.40 7 0 0 7 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TAGTCGTTTATTATGCTATTTCTCATATA................................................................... 29 0 5 1.40 7 2 2 0 2 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACT........................... 16 0 8 1.38 11 0 0 0 0 1 0 10 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGC............................................................................................................................... 18 0 20 1.35 27 0 0 0 0 0 0 27 0 0 0 0 0 0 0
........................................TTATTTCGCTCGCTACTG................................................................................................................................................................................................ 18 0 20 1.30 26 0 4 0 7 0 0 15 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCA............................................................................................................................ 21 1 20 1.30 26 0 0 0 0 0 26 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCC.............................................................................................................................. 19 0 20 1.25 25 0 5 0 0 1 0 0 8 1 8 0 2 0 0
.....................................................................................................................................................................................................TAGGGAACTATGGAGATCTCGCTA............................. 24 1 9 1.22 11 0 1 9 0 0 0 0 1 0 0 0 0 0 0
........................................TTATATCGCTCGCTACTGGTTGCAA......................................................................................................................................................................................... 25 2 20 1.20 24 0 0 24 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TTTGTGTGATTGCCCGACCA........................................................................................................................ 20 0 20 1.20 24 0 0 0 0 0 0 24 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGAT.................................................................................................................................. 15 0 20 1.20 24 0 24 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCTCGCTACTTCTGCGGCACTCCTGT........... 26 1 6 1.17 7 0 0 6 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTCCTGCGGCACA................ 27 1 6 1.17 7 0 0 6 0 0 0 0 1 0 0 0 0 0 0
........................................TTATATCGCTCGCTACTGGTTGCAGC........................................................................................................................................................................................ 26 1 20 1.15 23 0 0 23 0 0 0 0 0 0 0 0 0 0 0
........................................TTATATCGCTCGCTACTGGTTG............................................................................................................................................................................................ 22 1 20 1.15 23 0 0 16 0 0 0 0 7 0 0 0 0 0 0
........................................TTATATCGCTCGCTACTGGTTGCAGA........................................................................................................................................................................................ 26 2 20 1.15 23 0 0 23 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCTCGCTACTCCTGCGGCACTCCTG............ 25 0 7 1.14 8 0 0 5 1 2 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCCTAGGGAATTATGGAGATCTCGCA.............................. 26 1 7 1.14 8 0 0 8 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCCTAGGGAATTATGGAGATCTCGCTA............................. 27 0 7 1.14 8 4 0 1 2 1 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGGTACTGGT.............................................................................................................................................................................................. 20 1 20 1.10 22 4 13 0 5 0 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGGTACTGGTTGCAGCG....................................................................................................................................................................................... 27 1 20 1.10 22 5 11 0 6 0 0 0 0 0 0 0 0 0 0
.....................TGTAACGAACTGATTTTCTTTATT............................................................................................................................................................................................................. 24 0 20 1.05 21 8 1 0 9 0 0 1 0 0 2 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGACCAAGGT.................................................................................................................... 29 1 20 1.05 21 20 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGCTACTGGTTGCCG......................................................................................................................................................................................... 25 1 20 1.05 21 0 0 0 6 7 0 0 0 0 8 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTTCTGCGGCACTA............... 28 2 6 1.00 6 0 0 6 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGACCATT...................................................................................................................... 27 2 20 1.00 20 0 0 0 19 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................TCCTGCGGCACTCCTGTTGCAACGCCT. 27 0 3 1.00 3 0 0 0 0 0 0 0 0 0 3 0 0 0 0
............................................................................................................................................................................................................TTATGGAGATCTCGCTACTCCTGCGGC................... 27 0 5 1.00 5 3 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCCTAGGGAATTATGGAGATCTCG................................ 24 0 7 1.00 7 1 3 0 0 3 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................AATCCTCCTAGGGAATTA........................................... 18 0 8 1.00 8 0 0 0 0 0 0 8 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTTCTGCGG.................... 23 1 6 1.00 6 0 0 4 0 0 0 0 2 0 0 0 0 0 0
........................................................................................................................................................TATAGTCGTTTATTATGCT............................................................................... 19 0 5 1.00 5 0 0 0 0 0 0 5 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ATGGAGATCTCGCTACTTCTGCGGCA.................. 26 1 6 1.00 6 0 0 6 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TAGGTTCTTGATATAGTCGTTTATTA................................................................................... 26 0 3 1.00 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0
....................................TTCTTTATTTCGCTCGCTACTGGT.............................................................................................................................................................................................. 24 0 20 0.95 19 1 1 10 3 1 0 0 3 0 0 0 0 0 0
.....................TGTAACGAACTGATTTTCTT................................................................................................................................................................................................................. 20 0 20 0.95 19 7 0 0 8 1 0 1 0 0 2 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGACT......................................................................................................................... 24 1 20 0.90 18 0 13 0 0 0 0 0 4 1 0 0 0 0 0
........................................TTATTTCGCTCGCTACTGGTTGCAC......................................................................................................................................................................................... 25 1 20 0.90 18 0 2 8 0 2 0 1 2 0 3 0 0 0 0
..........................................................................................................................................................TAGTCGTTTATTATGCTATTTCTCAT...................................................................... 26 0 8 0.88 7 1 0 3 0 3 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TAGGGAACTATGGAGATCTCGCTACTCC......................... 28 1 7 0.86 6 1 2 0 2 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCCTAGGGAATTTTGGAGATCTCGC............................... 25 1 7 0.86 6 0 0 4 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................TTTATGATTTGTGTGATTGCCCGACC......................................................................................................................... 26 0 20 0.85 17 0 6 0 5 6 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTTTGTGATTGCCCGACCA........................................................................................................................ 25 1 20 0.85 17 10 4 3 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTCCTGCGGCACTA............... 28 1 6 0.83 5 0 0 3 0 0 0 0 2 0 0 0 0 0 0
.............................................................................................................................................................................................................TATGGAGATCTCGCTACTCCTGCGG.................... 25 0 6 0.83 5 0 0 0 0 0 0 5 0 0 0 0 0 0 0
.....................TGTAACGAACTGATTTTCT.................................................................................................................................................................................................................. 19 0 20 0.80 16 0 3 0 3 1 0 9 0 0 0 0 0 0 0
....................................TTCTTTATATCGCTCGCTACTGG............................................................................................................................................................................................... 23 1 20 0.80 16 0 0 9 0 0 0 0 7 0 0 0 0 0 0
........................................TTATTTCGCTCGCTACTGGTTGCATA........................................................................................................................................................................................ 26 2 20 0.80 16 0 1 14 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................ATGATTTGTGTGATTGCCCGACC......................................................................................................................... 23 0 20 0.75 15 0 0 0 0 0 0 2 0 13 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGAACAAGGA.................................................................................................................... 29 1 20 0.75 15 0 14 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................TTATGATTTGTGTGATTGCCCGACCA........................................................................................................................ 26 0 20 0.75 15 11 0 0 0 3 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................TAGTCGTTTATTATGC................................................................................ 16 0 8 0.75 6 0 0 0 0 0 0 6 0 0 0 0 0 0 0
..............................................................................................................................................AGGTTCTTGATATAGTCGTTTATTA................................................................................... 25 0 4 0.75 3 0 1 0 0 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TAGTCGTTTATTATGCTA.............................................................................. 18 0 8 0.75 6 0 0 0 0 1 0 5 0 0 0 0 0 0 0
.........................................................................................................TATTATTTGTGTGATTGCCCGACCA........................................................................................................................ 25 1 20 0.75 15 15 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TTTATTTCGCTCGCTACTGGTTGCAT......................................................................................................................................................................................... 26 1 20 0.75 15 0 1 13 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................TCCTAGGGAATTATGGAGATCTCGCTAC............................ 28 0 7 0.71 5 0 2 2 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCTCGCTACTCCTGCGGCACTC............... 22 0 7 0.71 5 0 0 1 0 0 0 1 0 1 2 0 0 0 0
.....................................................................................................................................................................................................TAGGGAACTATGGAGATCTCGCTACTC.......................... 27 1 7 0.71 5 0 1 1 0 0 0 3 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TAGGGAATTATGGAGATCTCGCTACT........................... 26 0 7 0.71 5 0 3 0 1 1 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGCTACTGGTTT............................................................................................................................................................................................ 22 1 20 0.70 14 0 0 4 0 0 0 0 10 0 0 0 0 0 0
........................................................................................................TTATGATTTGTGTGATTGCCCGACCAAGGA.................................................................................................................... 30 0 20 0.70 14 12 0 0 2 0 0 0 0 0 0 0 0 0 0
.......................................TTTATTTCGCTCGGTACTGGTT............................................................................................................................................................................................. 22 1 20 0.70 14 6 4 0 0 4 0 0 0 0 0 0 0 0 0
.........................................TATTTCGCTCGCTACTGGTTGCAGC........................................................................................................................................................................................ 25 0 20 0.70 14 3 2 0 3 0 0 0 0 6 0 0 0 0 0
.........................................................................................................TATGATTTGCGTGATTGCCCGACCAAGGA.................................................................................................................... 29 1 20 0.70 14 7 7 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TAGGATTTGTGTGATTGCCCGACCAAGGA.................................................................................................................... 29 1 20 0.70 14 14 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTCCTGCGGT................... 24 1 6 0.67 4 0 1 0 3 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TAGAGATCTCGCTACTTCTGCGGCAC................. 26 2 6 0.67 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTCCTGCGGCACAA............... 28 2 6 0.67 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TATGGAGATCTCGCTACTCCTGCGGCA.................. 27 0 6 0.67 4 0 0 1 0 2 0 1 0 0 0 0 0 0 0
.....................................................................AAGATCAGAGAGTTTGTGTGTTTGT............................................................................................................................................................ 25 0 3 0.67 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ATGGAGATCTCGCTACTCCTGCGGC................... 25 0 6 0.67 4 1 1 0 2 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ATGGAGATCTCGCTACTCCTGCGGCAC................. 27 0 6 0.67 4 1 2 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................AGCGGCAAGATCAGAGAGTTTGTGTG................................................................................................................................................................. 26 0 3 0.67 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TATGGAGATCTCGCTACTTCTGCGGCAA................. 28 2 6 0.67 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AGATCTCGCTACTCCTGCGGCACTC............... 25 0 6 0.67 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TCGCTACTTCTGCGGCACTCCTGT........... 24 1 6 0.67 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0
........................................TGATTTCGCTCGCTACTGGTTGCAG......................................................................................................................................................................................... 25 1 20 0.65 13 3 9 0 0 0 0 1 0 0 0 0 0 0 0
.......................................TTTATTTCGCTCGCTACT................................................................................................................................................................................................. 18 0 20 0.65 13 0 0 0 0 0 0 12 0 0 1 0 0 0 0
............................................................................................................GATTTGTGTGATTGCCCGACCAAGGA.................................................................................................................... 26 0 20 0.65 13 7 6 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TAGTCGTTTATTATGCTATTTCTC........................................................................ 24 0 8 0.63 5 0 1 0 0 1 0 2 1 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCTCGACC......................................................................................................................... 24 1 20 0.60 12 0 0 0 11 0 0 0 1 0 0 0 0 0 0
.........................................................................................................GATGATTTGTGTGATTGCCCGACCA........................................................................................................................ 25 1 20 0.60 12 0 12 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TCGCTACTCCTGCGGCACTCCTGTTG......... 26 0 5 0.60 3 0 0 0 2 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................TATAAGAAATAATCCTCCTAGGGAAT............................................. 26 0 5 0.60 3 0 0 0 2 1 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGACCAAGGAAA.................................................................................................................. 31 0 20 0.60 12 0 0 0 7 5 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TTATGGAGATCTCGCTACTTCTGCGGCAC................. 29 1 5 0.60 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TAGGGAATTATGGAGATCTCGCTACTC.......................... 27 0 5 0.60 3 0 0 0 0 1 0 2 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGACCAAGGC.................................................................................................................... 29 1 20 0.60 12 2 0 0 10 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATCGCCCGACCAAGGA.................................................................................................................... 29 1 20 0.55 11 0 10 0 1 0 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGGTACTGGTTGCAGCA....................................................................................................................................................................................... 27 2 20 0.55 11 2 5 0 1 3 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCTCGACCAAGG..................................................................................................................... 28 1 20 0.55 11 0 3 0 4 4 0 0 0 0 0 0 0 0 0
.....................TGTAACGAACTGATTTTCTATA............................................................................................................................................................................................................... 22 1 20 0.55 11 2 0 0 6 2 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTTCTGCGGCAAA................ 27 3 6 0.50 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AAGCAATAGGTTCTTGATATAGTCGTT........................................................................................ 27 1 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGACTT........................................................................................................................ 25 2 20 0.50 10 0 0 9 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTTCCCGACCAAGGA.................................................................................................................... 29 1 20 0.50 10 7 0 0 3 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TAGTCGTTTATTATGCTATTTCAGA....................................................................... 25 2 8 0.50 4 0 0 0 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................................GATGATTTGTGTGATTGCCCGACC......................................................................................................................... 24 1 20 0.50 10 1 9 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTTCTGCGGCACTT............... 28 2 6 0.50 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TATGGAGATCTCGCTACT........................... 18 0 8 0.50 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TCGCTACTCCTGCGGCACTCCTGTAA......... 26 2 6 0.50 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ATGGAGATCTCGCTACTTCTGCGGCAA................. 27 2 6 0.50 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGTCCA........................................................................................................................ 25 1 20 0.50 10 0 0 0 10 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTCCTGCGGCACTT............... 28 1 6 0.50 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTTCTGCGGCCC................. 26 2 6 0.50 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGCTACTGGTTGCT.......................................................................................................................................................................................... 24 1 20 0.50 10 0 0 4 2 1 0 2 1 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGACCAT....................................................................................................................... 26 1 20 0.50 10 0 0 0 0 0 0 0 6 4 0 0 0 0 0
...............................................GCTCGCTACTGGTTGCAG......................................................................................................................................................................................... 18 0 20 0.50 10 0 0 0 0 0 0 10 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGGGATTGCCCGACCA........................................................................................................................ 25 1 20 0.50 10 7 0 0 0 3 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTTCTGCGGAAC................. 26 2 6 0.50 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GGAGATCTCGCTACTTCTGCGGCAC................. 25 1 6 0.50 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTTCCCGACCA........................................................................................................................ 25 1 20 0.50 10 0 2 0 8 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GGAGATCTCGCTACTCCTGCGGCACT................ 26 0 6 0.50 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGCTACTGGTTGCAAA........................................................................................................................................................................................ 26 2 20 0.50 10 0 0 8 0 1 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................TATGGAGATCTCGCTACTCCTGCGGCAC................. 28 0 6 0.50 3 0 1 0 2 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TAATCCTCCTAGGGAATTATGGAGA..................................... 25 0 8 0.50 4 0 0 0 1 0 0 3 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGAGTGATTGCCCGACCAAGGA.................................................................................................................... 29 1 20 0.45 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATAGCCCGACCAAGGA.................................................................................................................... 29 1 20 0.45 9 0 9 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTACCCGACCAAGGA.................................................................................................................... 29 1 20 0.45 9 3 5 0 1 0 0 0 0 0 0 0 0 0 0
........................................TTATTTCGTTCGCTACTGGTTGCAG......................................................................................................................................................................................... 25 1 20 0.45 9 1 2 0 3 2 0 1 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGAGATTGCCCGACCAAGGA.................................................................................................................... 29 1 20 0.45 9 3 6 0 0 0 0 0 0 0 0 0 0 0 0
......................................CTTTATTTCGCTCGCTACTGGTTGC........................................................................................................................................................................................... 25 0 20 0.45 9 6 1 0 2 0 0 0 0 0 0 0 0 0 0
.......................................TTTATTTCGCTCGCTACTGGT.............................................................................................................................................................................................. 21 0 20 0.45 9 3 1 0 1 1 0 2 0 0 1 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGACCAC....................................................................................................................... 26 1 20 0.45 9 0 0 3 0 4 0 0 0 2 0 0 0 0 0
.............................................................................................................ATTTGTGTGATTGCCCGACCA........................................................................................................................ 21 0 20 0.45 9 0 0 0 0 0 0 9 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCTCGACCAAG...................................................................................................................... 27 1 20 0.45 9 6 0 0 3 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCCTAGGGAACTATGGAGATCTCGCTAC............................ 28 1 9 0.44 4 0 1 0 0 2 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................TCCTAGGGAATTTTGGAGATCTCGCA.............................. 26 2 7 0.43 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TCCTCCTAGGGAATTATGGAGATCTCGCT.............................. 29 0 7 0.43 3 1 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................ACTCCTGCGGCACTC............... 15 0 7 0.43 3 0 0 0 0 0 0 3 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TAGGGAATTATGGAGATCTCGCTAC............................ 25 0 7 0.43 3 0 0 2 1 0 0 0 0 0 0 0 0 0 0
..................................TTTTCTTTATTTCGCTCGCTACTGGT.............................................................................................................................................................................................. 26 0 20 0.40 8 2 3 0 2 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................TTATGGAGATCTCGCTACTTCTGCGGC................... 27 1 5 0.40 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGCTACTGGTTGT........................................................................................................................................................................................... 23 1 20 0.40 8 1 0 5 0 0 0 0 2 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGACCAATGA.................................................................................................................... 29 1 20 0.40 8 0 8 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGGCCGACCAAGGA.................................................................................................................... 29 1 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................TGTAACGAACTGATTTTCTTTATTTCGCT........................................................................................................................................................................................................ 29 0 20 0.40 8 5 1 0 0 0 0 2 0 0 0 0 0 0 0
.........................................................................................................TATGATTGGTGTGATTGCCCGACCAAGGA.................................................................................................................... 29 1 20 0.40 8 3 5 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CGCTACTCCTGCGGCACTCCTGTTG......... 25 0 5 0.40 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0
.........................................................................................................TTTGATTTGTGTGATTGCCCGACCAAGGA.................................................................................................................... 29 1 20 0.40 8 4 4 0 0 0 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGCTACTGGTTGGAG......................................................................................................................................................................................... 25 1 20 0.40 8 0 0 0 4 4 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGCTACTGGTTGTAG......................................................................................................................................................................................... 25 1 20 0.40 8 0 3 0 4 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TATAAGAAATAATCCTCCTAGGGAATTA........................................... 28 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TAGGGAATTATGGAGATCTCGCTACTCC......................... 28 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................TATTTCGCTCGCTACTGGTTGCAG......................................................................................................................................................................................... 24 0 20 0.40 8 0 0 2 2 1 0 1 0 2 0 0 0 0 0
.........................................................................................................TATGATTTGTGGGATTGCCCGACC......................................................................................................................... 24 1 20 0.40 8 1 2 0 1 4 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TATAAGAAATAATCCTCCTAGGGA............................................... 24 0 5 0.40 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ATTATGGAGATCTCGCTACTTCTGCGGC................... 28 1 5 0.40 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TATCATTTGTGTGATTGCCCGACCAAGGA.................................................................................................................... 29 1 20 0.40 8 0 8 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTTTGATTGCCCGACC......................................................................................................................... 24 1 20 0.40 8 2 0 0 6 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGACCTAGGA.................................................................................................................... 29 1 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................TTATATCGCTCGCTACTGGTTGC........................................................................................................................................................................................... 23 1 20 0.40 8 0 0 8 0 0 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGTTACTGGTTGCAG......................................................................................................................................................................................... 25 1 20 0.40 8 1 0 1 3 3 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGGTACTGGTTGCT.......................................................................................................................................................................................... 24 2 20 0.40 8 0 6 0 0 2 0 0 0 0 0 0 0 0 0
........................................CTATTTCGCTCGCTACTGGTTGCAG......................................................................................................................................................................................... 25 1 20 0.40 8 0 5 0 1 1 0 0 0 0 1 0 0 0 0
.........................................................................................................TATGATTTGTGCGATTGCCCGACCA........................................................................................................................ 25 1 20 0.40 8 5 0 0 2 1 0 0 0 0 0 0 0 0 0
...............................................................................................................TTGTGTGATTGCCCGAC.......................................................................................................................... 17 0 20 0.40 8 0 0 0 0 0 0 8 0 0 0 0 0 0 0
.............................................................................................................................................................................................AATCCTCCTAGGGAATTATGGAGATC................................... 26 0 8 0.38 3 0 0 0 0 0 0 3 0 0 0 0 0 0 0
...........................................................................................................................................................AGTCGTTTATTATGCTA.............................................................................. 17 0 8 0.38 3 0 0 0 0 0 0 3 0 0 0 0 0 0 0
............................................................................................................................................................................................TAATCCTCCTAGGGAATTTTGGAGA..................................... 25 1 8 0.38 3 2 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TAGTCGTTTATTATGCTATTTCTCAA...................................................................... 26 1 8 0.38 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................ATGATTTGTGTGATTGCCCGACCAAGG..................................................................................................................... 27 0 20 0.35 7 1 0 0 2 0 0 0 0 4 0 0 0 0 0
.........................................................................................................TATGATTTTTGTGATTGCCCGATCA........................................................................................................................ 25 2 20 0.35 7 0 6 0 0 1 0 0 0 0 0 0 0 0 0
.......................................TTTATTTCGCTCGCTACTGG............................................................................................................................................................................................... 20 0 20 0.35 7 1 0 4 0 0 0 0 2 0 0 0 0 0 0
.........................................................................................................TATGATTTGTATGATTGCCCGACCAAGGA.................................................................................................................... 29 1 20 0.35 7 0 7 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGATCAAGGA.................................................................................................................... 29 1 20 0.35 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCTCGAC.......................................................................................................................... 23 1 20 0.35 7 2 3 0 0 2 0 0 0 0 0 0 0 0 0
........................................TTATTTCGCTCGGTACTGG............................................................................................................................................................................................... 19 1 20 0.35 7 0 3 0 4 0 0 0 0 0 0 0 0 0 0
........................................TGATTTCGCTCGGTACTGGTTGC........................................................................................................................................................................................... 23 2 20 0.35 7 2 5 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTGCCCGACTA........................................................................................................................ 25 1 20 0.35 7 2 0 4 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGATTCCCCGACCAAGGA.................................................................................................................... 29 1 20 0.35 7 5 0 0 2 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGACTGCCCGACCA........................................................................................................................ 25 1 20 0.35 7 0 2 0 4 1 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTAGTGTGATTGCCCGACCAAGGA.................................................................................................................... 29 1 20 0.35 7 3 4 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TATGATTTGTGTGACTGCCCGACCAAGGA.................................................................................................................... 29 1 20 0.35 7 6 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CTCGCTACTCCTGCGGCACTCCTGT........... 25 0 6 0.33 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TGCCCGACCAAGGAAACGCAATAGG......................................................................................................... 25 0 18 0.33 6 1 1 0 4 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................AACGCAATAGGTTCTTGATATAGTCGT......................................................................................... 27 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................ACGCAATAGGTTCTTGATATAGTCGTT........................................................................................ 27 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GGAGATCTCGCTACTCCTGCGGCACTA............... 27 1 6 0.33 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TATGGAGATCTCGCTACTCCTGCGGCAA................. 28 1 6 0.33 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTTCTGAGGCAC................. 26 2 6 0.33 2 0 0 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................CCTAGGGAACTATGGAGATCTCGCTAC............................ 27 1 9 0.33 3 0 0 2 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TAGTCGTTTATTATG................................................................................. 15 0 9 0.33 3 0 0 0 1 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TCCTGCGGCACTCCTGTTGCAACGCCG. 27 1 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................TGGAGGTCTCGCTACATCTGCGGCAC................. 26 3 6 0.33 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
..................................................................GGCAAGATCAGAGAGTTTGTGTGTTT.............................................................................................................................................................. 26 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCTCGCTACTCCTGCGGCATCCCTGT........... 26 2 6 0.33 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TGCGGCACTCCTGTTGCAACGCCT. 24 0 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTCCT........................ 19 0 6 0.33 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGATACCTCGCTACTTCTGCGG.................... 23 3 6 0.33 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTCCTGCGGTT.................. 25 2 6 0.33 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................GGCAAGATCAGAGAGTTTGTGTGT................................................................................................................................................................ 24 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................GGAGATCTCGCTACTCCTGCGGCAA................. 25 1 6 0.33 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTTCTGTGGCA.................. 25 2 6 0.33 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTCCTGCGGCACTAA.............. 29 2 6 0.33 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGTAGATCTCGCTACTCCTGCGGCACT................ 27 1 6 0.33 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTC.......................... 17 0 6 0.33 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGGAGATCTCGCTACTCCTGCGGCACTCAA............. 30 2 6 0.33 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
....................................................................CAAGATCAGAGAGTTTGTGTGTTTGTC........................................................................................................................................................... 27 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CAGAACTATGCCATTTACATCACATTGCTTGACTAAAAGAAATAAAGCGAGCGATGACCAACGTCGCCGTTCTAGTCTCTCAAACACACAAACAGGGTGGTTTAAATACTAAACACACTAACGGGCTGGTTCCTTTGCGTTATCCAAGAACTATATCAGCAAATAATACGATAAAGAGTATATTCTTTATTAGGAGGATCCCTTAATACCTCTAGAGCGATGAGGACGCCGTGAGGACAACGTTGCGGAA
***********************************************************************...((...(((((((....((((((((((...........)))))).....))))...)))))))....))...********************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 M053
female body
 SRR902009
testis
 O002
Head
 M025
embryo
 GSM343915
embryo
.........................TGCTTGACTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 25 0 20 48.15 963 875 12 12 14 16 27 0 4 2 0 1 0
........................TTGCTTGACTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 26 0 20 36.95 739 236 134 185 112 0 67 0 5 0 0 0 0
..........................................................................................................................................GTTATCCAAGAACTATATCAGCAAAT...................................................................................... 26 0 3 12.00 36 0 13 4 17 0 2 0 0 0 0 0 0
...............................................................................................................................................................................................AGGAGGATCCCTTAATACCTCTAGAG................................. 26 0 7 10.71 75 0 40 24 6 0 5 0 0 0 0 0 0
..........................GCTTGACTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 24 0 20 7.80 156 135 1 1 0 9 3 0 0 2 0 0 5
...............................................................................................................................................................................................AGGAGGATCCCTTAAAACCTCTAGAG................................. 26 1 7 5.14 36 0 23 9 4 0 0 0 0 0 0 0 0
.........................................................................................................................................CGTTATCCAAGAACTATATCAGCAAAT...................................................................................... 27 0 3 5.00 15 0 7 1 6 0 1 0 0 0 0 0 0
............................................................................................................................................TATCCAAGAACTATATCAGCAAAT...................................................................................... 24 0 3 5.00 15 0 10 3 1 0 1 0 0 0 0 0 0
..............................GACTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 20 0 20 4.25 85 85 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TTATCCAAGAACTATATCAGCAAAT...................................................................................... 25 0 3 4.00 12 0 7 3 1 0 0 0 1 0 0 0 0
.............................................................CGTCGCCGTTCTAGTCTCTCAAACAC................................................................................................................................................................... 26 0 3 4.00 12 0 11 0 0 0 0 0 1 0 0 0 0
...........................................................................................ACAGGGTGGTTTAAATACTAAACA....................................................................................................................................... 24 0 8 3.88 31 1 1 1 6 15 1 4 2 0 0 0 0
..........................................................................................AACAGGGTGGTTTAAATACTAAACA....................................................................................................................................... 25 0 8 3.50 28 1 0 1 1 8 1 12 0 0 4 0 0
.............................TGACTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 21 0 20 2.85 57 48 0 5 2 2 0 0 0 0 0 0 0
............................TTGACTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 22 0 20 2.55 51 31 4 0 3 3 9 0 1 0 0 0 0
........................TTGCTTGACTAAAAGAAATAAAGCG......................................................................................................................................................................................................... 25 0 20 2.45 49 30 4 4 4 1 5 0 1 0 0 0 0
.........................TGCTTGACTAAAAGAAATAAA............................................................................................................................................................................................................ 21 0 20 2.20 44 44 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CGTTATCCAAGAACTATATCAGCAA........................................................................................ 25 0 3 2.00 6 0 1 5 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................AGGAGGATCCCTTAATACCTCTAGAGCGA.............................. 29 0 7 2.00 14 0 3 7 4 0 0 0 0 0 0 0 0
................................CTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 18 0 20 1.95 39 39 0 0 0 0 0 0 0 0 0 0 0
..........................ACTTGACTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 24 1 20 1.95 39 0 11 7 11 2 8 0 0 0 0 0 0
..........................................................................................................................................GTTATCCAAGAACTATATCAGCAA........................................................................................ 24 0 3 1.67 5 0 1 3 0 1 0 0 0 0 0 0 0
..........................................................................................TACAGGGTGGTTTAAATACTAAACA....................................................................................................................................... 25 1 8 1.63 13 0 0 0 0 12 0 0 0 1 0 0 0
.........................TGCTTGACTAAAAGAAATAAAG........................................................................................................................................................................................................... 22 0 20 1.40 28 28 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................ACCTCTAGAGCGATGAGGACGCCGT.................. 25 0 6 1.33 8 7 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................ATCCAAGAACTATATCAGCAAAT...................................................................................... 23 0 3 1.33 4 0 0 1 2 0 1 0 0 0 0 0 0
........................................................................................................................ACGGGCTGGTTCCTTTGCGTTAT........................................................................................................... 23 0 18 1.28 23 1 4 7 5 0 6 0 0 0 0 0 0
.................................TAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 17 0 20 1.25 25 25 0 0 0 0 0 0 0 0 0 0 0
...........................CTTGACTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 23 0 20 1.00 20 7 0 0 1 8 1 0 1 2 0 0 0
.......................................................................................................................................TGCGTTATCCAAGAACTATATCAGCAA........................................................................................ 27 0 3 1.00 3 3 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AGGACGCCGTGAGGACAACGTTGC.... 24 0 3 1.00 3 0 0 0 2 1 0 0 0 0 0 0 0
.........................TGCTTGACTAAAAGAAATAAAGCG......................................................................................................................................................................................................... 24 0 20 1.00 20 19 0 0 0 0 0 0 1 0 0 0 0
........................TTGCTTGACTAAAAGAAATAAA............................................................................................................................................................................................................ 22 0 20 0.90 18 18 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................ACGGGCTGGTTCCTTTGCGTTATCCAAGAA.................................................................................................... 30 0 18 0.89 16 0 5 9 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................AGGAGGATCCCTTGATACCTCTAGAGCGAT............................. 30 1 9 0.89 8 0 4 4 0 0 0 0 0 0 0 0 0
........................ATGCTTGACTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 26 1 20 0.80 16 2 7 2 2 0 3 0 0 0 0 0 0
..........................ACTTGACTAAAAGTAATAAAGCGA........................................................................................................................................................................................................ 24 2 20 0.80 16 0 0 9 0 0 7 0 0 0 0 0 0
.......................................................................................................................AACGGGCTGGTTCCTTTGCGTTAT........................................................................................................... 24 0 18 0.78 14 0 2 2 2 4 4 0 0 0 0 0 0
.............................TGACTAAAAGAAATAAAGCGAGCGA.................................................................................................................................................................................................... 25 0 20 0.75 15 1 0 6 2 0 5 0 1 0 0 0 0
...............................................................................................................................................................................................AGGAGGATCCCTTAATACCTCTAGAGCG............................... 28 0 7 0.71 5 0 1 4 0 0 0 0 0 0 0 0 0
...........................................................................................AGCAGGTGGTTTAAATACTAAACA....................................................................................................................................... 24 3 10 0.70 7 1 1 3 2 0 0 0 0 0 0 0 0
.........................................................................................TTACAGGGTGGTTTAAATACTAAACA....................................................................................................................................... 26 2 9 0.67 6 0 0 0 0 6 0 0 0 0 0 0 0
.............................................................CGTCGCCGTTCTAGTCTCTCAAAC..................................................................................................................................................................... 24 0 3 0.67 2 0 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GACGCCGTGAGGACAACGTTGC.... 22 0 3 0.67 2 0 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................TGGTTCCTTTGCGTTATCCAAGAACT.................................................................................................. 26 0 6 0.67 4 1 0 0 0 0 3 0 0 0 0 0 0
.........................TGCTTGACTAAAAGAAATAA............................................................................................................................................................................................................. 20 0 20 0.65 13 13 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................AGGGTGGTTTAAATACTAAAGA....................................................................................................................................... 22 1 20 0.65 13 0 13 0 0 0 0 0 0 0 0 0 0
...............................ACTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 19 0 20 0.65 13 13 0 0 0 0 0 0 0 0 0 0 0
........................TTACTTGACTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 26 1 20 0.65 13 0 1 2 4 4 2 0 0 0 0 0 0
.........................TGCTTGACTAAAAGAA................................................................................................................................................................................................................. 16 0 20 0.65 13 13 0 0 0 0 0 0 0 0 0 0 0
.........................TGCTTGACTAAAAGAAATA.............................................................................................................................................................................................................. 19 0 20 0.60 12 12 0 0 0 0 0 0 0 0 0 0 0
.........................AGCTTGACTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 25 1 20 0.60 12 4 0 5 3 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGAGCGATGAGGACGCCGTGAGGAC............ 25 0 7 0.57 4 2 0 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................CGGGCTGGTTCCTTTGCGTTATCCAAGAA.................................................................................................... 29 0 18 0.56 10 0 2 7 0 0 0 0 0 1 0 0 0
.........................TACTTGACTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 25 1 20 0.55 11 4 1 0 0 4 0 0 0 2 0 0 0
........................TTGCTTGACTAAAAGAAATAAAG........................................................................................................................................................................................................... 23 0 20 0.55 11 11 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................TGCGTTATCCAAGAACTA................................................................................................. 18 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CTAACGGGCTGGTTCCTTTGCGTTAT........................................................................................................... 26 0 18 0.50 9 1 0 1 1 4 2 0 0 0 0 0 0
........................................................................................................................................GCGTTATCCAAGACCTATATCAGCAA........................................................................................ 26 1 4 0.50 2 1 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................AAACAGGGTGGTTTAAATACTAAACA....................................................................................................................................... 26 0 8 0.50 4 0 0 1 0 3 0 0 0 0 0 0 0
.......................................................................................................................AACGGGCTGGTTCCTTTGCGT.............................................................................................................. 21 0 18 0.50 9 1 0 5 1 2 0 0 0 0 0 0 0
......................................................................................................................TAACGGGCTGGTTCCTTTGCGTTAT........................................................................................................... 25 0 18 0.50 9 1 1 2 0 1 4 0 0 0 0 0 0
...................................................................................................................CACTAACGGGCTGGTTCCTTT.................................................................................................................. 21 0 20 0.50 10 0 0 0 0 10 0 0 0 0 0 0 0
...........................................................................................ACAGGGTGGTTTAAATACTAA.......................................................................................................................................... 21 0 8 0.50 4 0 0 0 0 0 0 4 0 0 0 0 0
.........................TGCTTGACTAAAAGAAAT............................................................................................................................................................................................................... 18 0 20 0.45 9 9 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................AACGGGCTGGTTCCTTTGCGTT............................................................................................................. 22 0 18 0.44 8 0 2 2 2 2 0 0 0 0 0 0 0
........................................................................................................................ACGGGCTGGTTCCTTTGCGTTATCCA........................................................................................................ 26 0 18 0.44 8 0 5 2 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GGACGCCGTGAGGACA........... 16 0 7 0.43 3 3 0 0 0 0 0 0 0 0 0 0 0
........................TTGCTTGACTAAAAGAAATAA............................................................................................................................................................................................................. 21 0 20 0.40 8 7 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................AGGGTGATTTAAATACTAAACA....................................................................................................................................... 22 1 20 0.40 8 0 0 0 8 0 0 0 0 0 0 0 0
...................................................................................................................CACTAACGGGCTGGTTCCTT................................................................................................................... 20 0 20 0.40 8 7 0 0 0 0 0 0 0 0 0 1 0
....................................................................................................................ACTAACGGGCTGGTTCCTTTGCGT.............................................................................................................. 24 0 18 0.39 7 0 0 0 3 2 0 0 2 0 0 0 0
.........................TGCTTGACTAAAAGAAA................................................................................................................................................................................................................ 17 0 20 0.35 7 7 0 0 0 0 0 0 0 0 0 0 0
............................TTGACTAAAAGAAATAAAGCGAGCGA.................................................................................................................................................................................................... 26 0 20 0.35 7 2 0 1 1 0 2 0 1 0 0 0 0
.............................................................................................AGGGTGGTTTAAATACTAAACG....................................................................................................................................... 22 1 20 0.35 7 0 0 7 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGATGAGGACGCCGTGAGGACAACGT....... 27 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................ACGTCGCCGTTCTAGTCTCTCAAACAC................................................................................................................................................................... 27 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CGCCGTGAGGACAACGTTGC.... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGAGCGATGAGGACGCCGTGAGGACA........... 26 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0 0 0
......................................................TGACCAACGTCGCCGTTCTAGTCT............................................................................................................................................................................ 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGAGCGATGAGGACGCCGTGAGGACAACGT....... 30 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
..................ATCACATTGCTTGACTAAAAGAAAT............................................................................................................................................................................................................... 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................CCGTTCTAGTCTCTCAAACAC................................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CAAACAGGGTGGTTTAAATACTAAACA....................................................................................................................................... 27 0 6 0.33 2 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CGTTATCCAAGAACTATATCAGCAAAG...................................................................................... 27 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGCCGTGAGGACA........... 19 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................TGCGTGATCCAAGAACTATATCAGCAA........................................................................................ 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CGATGAGGACGCCGTGAGGACAACGT....... 26 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................TGCGTTATCCAAGAACTATATCAGCAAAT...................................................................................... 29 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................ACCTCTAGAGCGATGAGGA........................ 19 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0 0 0
.....................................................ATGACCAACGTCGCCGTTCTAGTCT............................................................................................................................................................................ 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................CCAACGTCGCCGTTCTAGTCTCTCAAA...................................................................................................................................................................... 27 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................ACAAACAGGGTGGTTTAAATACTAAACA....................................................................................................................................... 28 0 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0
.........................................................CCAACGTCGCCGTTCTAGTCTCTCAAACA.................................................................................................................................................................... 29 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CGCCGTGAGGACAACGTTGCGGAA 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TTTATCCAAGAACTATATCAGCAAAT...................................................................................... 26 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TATCCAAGAACTATATAAGCAAAT...................................................................................... 24 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................GACCAACGTCGCCGTTCTAGTCTCTCAAAC..................................................................................................................................................................... 30 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................CGTCGCCGTTCTAGTCTCTCAAACA.................................................................................................................................................................... 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................ATACGTCGCCGTTCTAGTCTCT.......................................................................................................................................................................... 22 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGATGAGGACGCCGTGAGGACAACGT....... 26 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................CAACGTCGCCGTTCTAGTCTCTCAAAC..................................................................................................................................................................... 27 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................ACGCCGTGAGGACAACGTTGCGGAA 25 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................CCAACGTCGCCGTTCTAGTCTCTCAAAC..................................................................................................................................................................... 28 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................CGTTCTAGTCTCTCAAACACACA................................................................................................................................................................ 23 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................ATATCCAAGAACTATATCAGCAAAT...................................................................................... 25 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................GCTTGACTAAAAGAAATAAAG........................................................................................................................................................................................................... 21 0 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TAGGGTGGTTTAAATACTAAACA....................................................................................................................................... 23 1 20 0.30 6 0 0 5 0 1 0 0 0 0 0 0 0
.............................................................................................AGGGTGGTTTAAATACCAAACA....................................................................................................................................... 22 1 20 0.30 6 0 0 6 0 0 0 0 0 0 0 0 0
.......................ATTGCTTGACTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 27 0 20 0.30 6 2 0 1 2 1 0 0 0 0 0 0 0
.........................TGCTTGACTAAAAGA.................................................................................................................................................................................................................. 15 0 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TGGGTGGTTTAAATACTAAACA....................................................................................................................................... 22 1 20 0.30 6 0 2 4 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TAGGAGGATCCCTTAATACCTCTAGAG................................. 27 0 7 0.29 2 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................TGCGTTATACAAGACCTATGTCAGCAA........................................................................................ 27 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.................GATCACATTGCTTGACTAAAAGAAA................................................................................................................................................................................................................ 25 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................TTATCCAAGAACCATATCAGCAAAT...................................................................................... 25 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................TTATACAAGAACCATGTCAGCAAAT...................................................................................... 25 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................TGCTTGACTAAAAGAAATAAAGCAA........................................................................................................................................................................................................ 25 1 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGGACGCCGTGAGGACAACGTTGA.... 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TCCAAGAACTATATCAGCAAAT...................................................................................... 22 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................TGACTAAAAGAAATAAAGCGAGCCAT................................................................................................................................................................................................... 26 1 20 0.25 5 0 0 0 3 0 2 0 0 0 0 0 0
...............................................................................................................................................CCAAGAACTATATCAGCAAATAAT................................................................................... 24 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................AATACGATAAAGAGTA...................................................................... 16 0 8 0.25 2 2 0 0 0 0 0 0 0 0 0 0 0
........................TTGCTTGACTAAAAGAA................................................................................................................................................................................................................. 17 0 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGAGCGATGAGGACGCCG................... 18 0 9 0.22 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CGGGCTGGTTCCTTTGCGTTAT........................................................................................................... 22 0 18 0.22 4 3 0 1 0 0 0 0 0 0 0 0 0
..............................GACTAAAAGAAATAAAGCG......................................................................................................................................................................................................... 19 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................AAAAAAATACGATAAAGAGTATATTCTT............................................................... 28 2 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................TGCTTGACTAAAAGAAATGAAGCGA........................................................................................................................................................................................................ 25 1 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0
........................CTGCTTGACTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 26 1 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0
........................TTGCTTGACTAAAAGAAATA.............................................................................................................................................................................................................. 20 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0
.........................CGCTTGACTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 25 1 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................ATGGTGGTTTAAATACTAAACA....................................................................................................................................... 22 1 20 0.20 4 0 0 4 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AGAGTATATTCTTTATTAGGAGGATCC................................................. 27 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................ATTCTTTATTAGGAGGATCCCTT.............................................. 23 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................TGACTAAAAGAAATAAAGCGAGCGAT................................................................................................................................................................................................... 26 0 20 0.20 4 1 0 1 2 0 0 0 0 0 0 0 0
.................................................TGCGATGACTAACGTCGCCGTT................................................................................................................................................................................... 22 2 10 0.20 2 2 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................ACTAACGGGCTGGTTCCTTTGCGTTAT........................................................................................................... 27 0 18 0.17 3 0 0 0 0 3 0 0 0 0 0 0 0
................................................................................................................................................................................................................CCTCTAGAGCGATGAGGACGCCGTGA................ 26 0 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................AACCTCTAGAGCGATGAGGACGCCGT.................. 26 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CTAACGGGCTGGTTCCTTTGCGT.............................................................................................................. 23 0 18 0.17 3 0 1 0 0 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................TCTAGAGCGATGAGGACGCCGT.................. 22 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................ACGGGCTGGTTCCTTTGCGT.............................................................................................................. 20 0 18 0.17 3 0 0 0 1 1 1 0 0 0 0 0 0
...................................................................................................................CACTAACGGGCTGGTTCCTTTGCGT.............................................................................................................. 25 0 18 0.17 3 0 0 0 1 1 0 0 1 0 0 0 0
................................................................................................................................................................................................................ACTCTAGAGCGATGAGGACGCCGTGA................ 26 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................ATACCTCTAGAGCGATGAGGACGCCGT.................. 27 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGAGCGATGAGGACGCCGTGAGGACAA.......... 27 0 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0
................ACATAACATTGCTTGACTAAAAGAA................................................................................................................................................................................................................. 25 1 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TACCTCTAGAGCGATGAGGACGCCGT.................. 26 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CATACAGGGTGGTTTAAATACTAAACA....................................................................................................................................... 27 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................TTACGGGCTGGTTCCTTTGCGTTAT........................................................................................................... 25 1 18 0.17 3 0 0 1 1 1 0 0 0 0 0 0 0
......................................................................................................................AAACGGGCTGGTTCCTTTGCGTTAT........................................................................................................... 25 1 18 0.17 3 0 0 1 0 2 0 0 0 0 0 0 0
...........................................................................................AAAGGGTGGTTTAAATACTAAACA....................................................................................................................................... 24 1 12 0.17 2 0 0 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................AACGGGCTGGTTCCTTTGCGTTATCCA........................................................................................................ 27 0 18 0.17 3 0 0 2 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AACTCTAGAGCGATGAGGACGCCGT.................. 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................TTCCTTTGCGTTATACAAGA..................................................................................................... 20 1 19 0.16 3 3 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CGGGCTGGTTCCTTTGCGTTATACAAGAC.................................................................................................... 29 2 20 0.15 3 0 2 0 1 0 0 0 0 0 0 0 0
.............................................................................................AGGGTGGTTTAAAGACTAAACA....................................................................................................................................... 22 1 20 0.15 3 0 1 2 0 0 0 0 0 0 0 0 0
.........................TGCTTGACTAAAAGAAATATAGCGA........................................................................................................................................................................................................ 25 1 20 0.15 3 0 0 0 0 3 0 0 0 0 0 0 0
...................................AAAGAAATAAAGCGAGCGATGACCAA............................................................................................................................................................................................. 26 0 20 0.15 3 1 1 0 0 0 0 0 1 0 0 0 0
...................................................................................................................CACTAACGGGCTGGTTCCT.................................................................................................................... 19 0 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AGGACGCAGTGTGGACAAT......... 19 3 20 0.15 3 0 0 1 1 0 1 0 0 0 0 0 0
........................TTGCTTGACTAAAAGAAATAAAGTGA........................................................................................................................................................................................................ 26 1 20 0.15 3 1 1 0 1 0 0 0 0 0 0 0 0
.........................TACTTGACTAAAAGTAATAAAGCGA........................................................................................................................................................................................................ 25 2 20 0.15 3 0 0 2 0 0 1 0 0 0 0 0 0
.........................TGCTTGACTAAAAGAAATAGAGCGA........................................................................................................................................................................................................ 25 1 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
........................TTGCTTGACTAAAAGAAATAAAGCTA........................................................................................................................................................................................................ 26 1 20 0.15 3 1 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................AGGGTGGTTTAAATATTAAACA....................................................................................................................................... 22 1 20 0.15 3 0 0 2 0 0 1 0 0 0 0 0 0
...................................................................................................................AACTAACGGGCTGGTT....................................................................................................................... 16 1 20 0.15 3 0 0 3 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................AGGAGGATCCCATAATACCTCTAGAGCGA.............................. 29 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TAGAGCGATGAGGACGCCGTGAGGA............. 25 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGAGCGATGAGGACGCCGTGAGGA............. 24 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................AGGAGGATCCCTTAATACCTCTAGAGC................................ 27 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AAGCGATGAGGACGCCGTGAGGAC............ 24 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GCGATGAGGACGCCGTGAGGA............. 21 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................AGGAGGATCCCTTAAAACCTCTAGAGC................................ 27 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TCCCTTAATACCTCTAGAGCGAT............................. 23 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GAGGACGCCGTGAGGACA........... 18 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................AGGAGGATCCCTTAATACCTCTATAG................................. 26 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................AGGAGGATCCCCTAATACCTCTAGAGCGA.............................. 29 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TAGGAGGATCCCTTAAAACCTCTAGAGCGAT............................. 31 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CTAGAGCGATGAGGACGCCGTGAGGAC............ 27 0 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................GGAGGATCCCTTAATACCTCTAGAGCGAT............................. 29 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................ATCCCTTAATACCTCTAGAGCGA.............................. 23 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CTAGAGCGATGAGGACGCCGTGAGGA............. 26 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GCGATGAGGACGCCGTG................. 17 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TGGAGGATCCCTTAATACCTCTAGAG................................. 26 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................AGGAGGATCCCTTAAAACCTCTAGAGCGA.............................. 29 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................AGGAGGATCCCTTAATACGTCTAGAGCGAT............................. 30 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGAGCGATGAGGACGCCGTG................. 20 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................AGGAGGATCCCTTAATACCTCTAGA.................................. 25 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................AGCGATGAGGACGCCGTGAG............... 20 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TAGGAGGATCCCTTAATACCT....................................... 21 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................AGGATCCCTTAATACCTCT..................................... 19 0 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AGGACGCAGTGTGGACAA.......... 18 2 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................TTCCTTTGCGTTATACAAGACCGA................................................................................................. 24 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AATAGGGTGGTTTAAATACTAAACA....................................................................................................................................... 25 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................AAAAAATACGATAAAGAGTAT..................................................................... 21 1 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................TTCCTTTGCGTTATACAAGACC................................................................................................... 22 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................AGGAGGATCCCTTAATACCTCT..................................... 22 0 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................AGGAGCATCCCTTAATACCTCT..................................... 22 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................GGAGGATCCCTTAATACCT....................................... 19 0 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................ATACAGGGTGGTTTAAATACTAAACA....................................................................................................................................... 26 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................ATTAGGAGGATCCCTTAATACCTCTA.................................... 26 0 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................AGGAGGATCCCTTAATACCT....................................... 20 0 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................AAACAGGGTGGTTTAAATACTAAAGA....................................................................................................................................... 26 1 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................AGGAGGATCCCTTAAAACCTCT..................................... 22 1 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GAGGACGCCGTGAGGA............. 16 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GAGGACGCCGTGAGG.............. 15 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TGGTTCCTTTGCGTTATACAAGACC................................................................................................... 25 2 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................GGCTGGTTCCTTTGCGTTATACAAGACC................................................................................................... 28 2 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................AACAGGGTGGTTCAAATACTAAACA....................................................................................................................................... 25 1 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................AGGAGGATCCCTTAAT........................................... 16 0 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................CACAGGGTGGTTTAAATACTAAACA....................................................................................................................................... 25 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................TAGGAGGATCCCTTAATACC........................................ 20 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TAGGAGGATCCCTTGATACCTCTAGAGCGAT............................. 31 1 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................AGGAGGATCCCTTGATACCTCTAGAGCTAT............................. 30 2 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................ACGGGCTGGTTCCTTTGCGTTATCCAAG...................................................................................................... 28 0 18 0.11 2 0 0 2 0 0 0 0 0 0 0 0 0
.........................................................................................TCACAGGGTGGTTTAAATACTAAACA....................................................................................................................................... 26 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AGGACGCCGTGAGGA............. 15 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CGGGCTGGTTCCTTTGCGTTATCCAAGA..................................................................................................... 28 0 18 0.11 2 0 0 0 0 2 0 0 0 0 0 0 0
.........................................................................................................................CGGGCTGGTTCCTTTGCGTT............................................................................................................. 20 0 18 0.11 2 2 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CTAACGGGCTGGTTCCTTTGCGTT............................................................................................................. 24 0 18 0.11 2 0 0 0 0 0 1 0 0 0 0 1 0
.........................................................................................................................CGGGCTGGTTCCTTTGCGTTATCCAA....................................................................................................... 26 0 18 0.11 2 0 0 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................CGGGCTGGTTCCTTTGCGTTATCC......................................................................................................... 24 0 18 0.11 2 0 0 0 0 2 0 0 0 0 0 0 0
..........................................................................................................................GGGCTGGTTCCTTTGCGTTATCCAAGAA.................................................................................................... 28 0 18 0.11 2 0 0 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................AACGGGCTGGTTCCTTTGCGTTATCCAA....................................................................................................... 28 0 18 0.11 2 0 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................TGGGCTGGTTCCTTTGCGTTAT........................................................................................................... 22 1 18 0.11 2 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................ACAGGCTGGTTCCTTTGCGTTATCCAAG...................................................................................................... 28 1 18 0.11 2 0 0 0 0 0 0 0 0 2 0 0 0
....................................................................................................................................................................................................................TAGAGCGATGAGGACGC..................... 17 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................ACGGGCTGGTTCCTTTGCGTTATCC......................................................................................................... 25 0 18 0.11 2 0 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................CGGGCTGGTTCCTTTGCGTTA............................................................................................................ 21 0 18 0.11 2 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................ACGGGCTGGTTCCTTTGCGTTATC.......................................................................................................... 24 0 18 0.11 2 0 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................TGCGTTATCCAAGAA.................................................................................................... 15 0 19 0.11 2 2 0 0 0 0 0 0 0 0 0 0 0
........................TTGCTTGACTAAAAGAAATAAAACGA........................................................................................................................................................................................................ 26 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................TGCTTGACTAAAAGAAATAAAACGA........................................................................................................................................................................................................ 25 1 20 0.10 2 1 0 1 0 0 0 0 0 0 0 0 0
........................TTGCTTGACTAAAAGAAAT............................................................................................................................................................................................................... 19 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................TTCTTGACTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 25 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.................................................AGCGATGACCAACGTC......................................................................................................................................................................................... 16 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................AGGGAGGTTTAAATACTAAACA....................................................................................................................................... 22 1 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0
.......................ATTGCTTGACTAAAAGAAATAAAGCG......................................................................................................................................................................................................... 26 0 20 0.10 2 0 0 1 1 0 0 0 0 0 0 0 0
.............................TGACTAAAAGAAATAAAGCGAG....................................................................................................................................................................................................... 22 0 20 0.10 2 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................AAGCAGGTGGTTTAAATACTAAACA....................................................................................................................................... 25 3 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................TGCTTTACTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 25 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
..........................GCTTGACTAAAAGAAATAAAGCG......................................................................................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................ACTAACGGGCTGGTTCCTTT.................................................................................................................. 20 0 20 0.10 2 0 0 0 0 0 0 0 0 2 0 0 0
........................................................................................AAAACAGGGTGGTTTAAATACTAAACA....................................................................................................................................... 27 1 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................ATTGCTTGACTAAAAGAAATAAA............................................................................................................................................................................................................ 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
..........................GCTTGCCTAAAAGAAATAAAGCGA........................................................................................................................................................................................................ 24 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................AAGGACGCAGTGTGGACAA.......... 19 3 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0
................................CTAAAAGAAATAAAGCG......................................................................................................................................................................................................... 17 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................TGCTTGACTAAAAGAAATAAAGCCA........................................................................................................................................................................................................ 25 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TTATAGGGTGGTTTAAATACTAAACA....................................................................................................................................... 26 3 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................AGGGTGGTTTGAATACTAAACA....................................................................................................................................... 22 1 20 0.10 2 0 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................AATACTAAACACACTAACGGGCTGGTTC...................................................................................................................... 28 0 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................GCAACTAATACGATA............................................................................. 15 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
..........................GCTTGACTAAAAGAAATAAAGC.......................................................................................................................................................................................................... 22 0 20 0.10 2 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................ACGGGCTGGTTCCTTTGCGTTATACAAGAC.................................................................................................... 30 2 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
......................................GAAATAAAGCGAGCGAT................................................................................................................................................................................................... 17 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................AGGGTGGTTTAAATACTAAACAC...................................................................................................................................... 23 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0
.........................TGCTTGACTAAAAGAAATAAAGCTA........................................................................................................................................................................................................ 25 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................TGCTTGACTAAAAGAAATAAAGTTA........................................................................................................................................................................................................ 25 2 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0
.........................TGCTTGACTAAAAGAGATAAAGCGA........................................................................................................................................................................................................ 25 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................CAGGTGGTTTAAATACTAAACA....................................................................................................................................... 22 2 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0
...............................ACTAAAAGAAATAAAGCG......................................................................................................................................................................................................... 18 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
................................CTAAAAGAAATAAAGCGAGCGATGAC................................................................................................................................................................................................ 26 0 20 0.10 2 0 0 0 0 1 1 0 0 0 0 0 0
......................................................................................................................................................................AACGATAAAGAGTATATTCTTCATT........................................................... 25 2 11 0.09 1 0 0 0 0 1 0 0 0 0 0 0 0
................ACTATACATTGCTTGACTAAAAGAAA................................................................................................................................................................................................................ 26 3 12 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................AAAAAGGGTGGTTTAAATACTAAACA....................................................................................................................................... 26 1 12 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................AGCAGGTGGTTTAAATACTAAAC........................................................................................................................................ 23 3 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
................AAAAAACATTGCTTGACTAAAAGAAA................................................................................................................................................................................................................ 26 3 14 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AGGACGCAGTGTGGACA........... 17 2 15 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................ATACCTCTAGAGTGATGAGGACGCC.................... 25 1 17 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................CGGGCTGGTTCCTTTGCGT.............................................................................................................. 19 0 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GGTTCCTTTGCGTTATCCA........................................................................................................ 19 0 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CGGGCTGGTTCCTTTGCGATATCC......................................................................................................... 24 1 18 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................AAACGGGCTGGTTCCTTTGCGT.............................................................................................................. 22 1 18 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................TGGTTCCTTTGCGTTAT........................................................................................................... 17 0 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TGGTTCCTTTGCGTTATCCAAGAA.................................................................................................... 24 0 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TGGTTCCTTTGCGTTATCCA........................................................................................................ 20 0 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................AAATGGGCTGGTTCCTTTGCGT.............................................................................................................. 22 2 18 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GGGCTGGTTCCTTTGCGTTATCC......................................................................................................... 23 0 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................CACTAACGGGCTGGTTCCTTTGCGTTAT........................................................................................................... 28 0 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................AACGGGCTGGTTCCTTTGCGTTATCCAAG...................................................................................................... 29 0 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................GGGCTGGTTCCTTTGCGTT............................................................................................................. 19 0 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................AACGGGCTGCTTCCTTTGCGTTAT........................................................................................................... 24 1 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................ATAACGGGCTGGTTCCTTTGCGTTAT........................................................................................................... 26 1 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................ACGGGCTGGTTCCTTTGCGTTATCCAA....................................................................................................... 27 0 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................ACTAACGGGCTGGTTCCTTTGCGTT............................................................................................................. 25 0 18 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................GGGCTGGTTCCTTTGCGT.............................................................................................................. 18 0 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................ATCGGGCTGGTTCCTTTGCGTTAT........................................................................................................... 24 1 18 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................GACCAACGTCGCCGATCTAGTCTCTCAA....................................................................................................................................................................... 28 1 18 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................CTAACGGGCTGGTTCCTTTGCGTTATCCAA....................................................................................................... 30 0 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................ACGGGCTGGTTCCTTTGCGGTATCCAAGAA.................................................................................................... 30 1 18 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TCGGGCTGGTTCCTTTGCGTTATCCAAGAA.................................................................................................... 30 1 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................GGGCTGGTTCCTTTGCGTTAT........................................................................................................... 21 0 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................TTGCTGGTTCCTTTGCGTTAT........................................................................................................... 21 2 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................AAACGGGCTGGTTCCTTTGCGTTATCCA........................................................................................................ 28 1 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................AACTAACGGGCTGGTTCCTTTGCGT.............................................................................................................. 25 1 18 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................TACGGGCTGGTTCCTTTGCGTTATCCAAGAA.................................................................................................... 31 1 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................ACGGGCTGGTTCCTTTGCGTTATCCAAGA..................................................................................................... 29 0 18 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................ATACGGGCTGGTTCCTTTGCGTTAT........................................................................................................... 25 2 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:22625037-22625286 + dsi_27876 GTCTTGATACGGTAAA--TGTAGTGTAACGAACTGATTTTCTTTATTT--C-GCTCGCTACTGGTT-GCAGCGGCAAGATCAG-AGAGTTTGTGTGTTTGTCCCACCAAATTTATGA-TT-TGTGTGATTGCCCG--A--CCAAGGAA--A-CGCA-A-------TAG------------GTTCTT----GATATAGTCG--TTTAT-------------------T--ATGC---TATTTCTCAT------------ATAAGA-------------AATAATCCTC-C-----------------TAGGGAATTAT------GGAGAT-------CTCGCTACT---------CCTGCGGCACTCCTG--TTGCAAC-GCCTT
droSec2 scaffold_557:2437-2681 + GTTCTGTTTAA----A--CAT-GTGTAACGAACTGATTTTCTTTATGT--C-GCCCGCTACTGATT-GCAGCGGCTAGCTCAG-AGAGTTTGCGCGTTCGTCCCACCAAATTTATGA-TT-TGTGTGATTGCCCG--A--CCAATGAA--A-AGCA-A-------TAG------------GTTCTT----GATATAGTCG--TTTAT-------------------T--ATGC---TATTTCTAAT------------ATAAGA-------------AATAATTCTT-C-----------------TAGAGAATTAT------GGAGAT-------CTCGCTACT---------CCTGCGGCGCTCCTG--TTGCAAC-GCCTT
dm3 chr3RHet:2101901-2102116 - T------------------GTGTTGTAACGAACTGATTTTCTT-ATTT--C-GCTCGCTACGGTTT-GCAGCGGCTAGCTCAG-AGAGTTTGTGCGTTCGTCCCACCAAATTTATGA-TT-TGTGTGATTGCCCG--A--CCAAGGAA--A-AGCA-A-------TGG------------GTTCTT----ATGATAGCCG--TTTAT-------------------T--CTAC---TGTTGTATATAT------------AATT-------------AA---TT--------------------------------C------GGCGAT-------CTCGCTGCT---------CCTGCGTCGCTTTTC--CTGCAAC-GCCTT
droEre2 scaffold_4845:738534-738746 + TG----------------TAGTTTGTAA-GAACTGTTTTAT------T--C-ACTTTCTACGAGTT-GCAATGGCTAGCTCAA-AAAGTTTGTTTGTTCGTTTCACCAAATTTATGT-TT-TGAGTGATTGTCCA--A------G-A-AGAAGACT----------GG------------GTTTCAGATTTAC---GTCGCTTTTAT-------------------T--A------------------------------AAGG-------------GAT---ACCC-T-----------------AAATGGACTCC------GGCGGT------CCTCGCTGTC-----TGC-TGTGCGGCGTCATTC--TCCCGAC-GTCTT
droYak3 v2_chrUn_5067:83-313 + TATTATAT-------A--CGCGTTGTAACGAATGGATTTCTTGGTTTC--T-GCCCGCTACGGATT-GCAACGGCTAGCTCAG-AGAGTTTATTTGTTCGTGCCACCAAATTTATGA-TT-TGTGTGATTGCCCG--A--CCAAAAAA--A-AAAA-AGATTT-------AA---ATAGATTGATAGATTTAAACTA---CCTTTAT-------------------G-----CAGTGACG------------------CTTGACA------------------------------------------AA-------T------AGAATC-------TTCGCTGGT---------CCCGCGACGCTCTTC--TCATCAC-CTTTC
droBia1 scf7180000302036:91090-91217 + ATCTTGATTGGGTGGG-GCGTACTGTAACGAACTGATTTCTTTGGTTT-CT-GCTCGCTACGGTATTTGTGCGGCTAGCTCAGTAGATTGTGTGTGTTCGTCCCACCAAATTTATA--TA-AGCGTGACCGCCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415624:4961-5135 + ATATTTTTAGG----ACTCATGGTGTAACGAACTGATTATTTA-AGTC--T-GCTCGCTACGAGATTCGTGCGGCTAGCTCAG-TGTAGTTGTGTGTTTGTCCCACCAAATTTATA--TA-AACGTGACCGCCCAGTAGATCAGTGA--GAAAGCACAGAATTCACGG------------GTTCTT----AG--TGG--G--TTTAT-------------------T--GCG--------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000488952:2166-2397 + -----------------------TGTAACGACCTGATTTCTATGTATT-CTCGCTCGCTACGTTAA-CGGGCGGCTAGCTCAG-AGAGGTTATGGGTTCGTTCCACCAAATTTATT---T-TGGGTGATTGCCTT--TGACCAATGA-ATAACGCA-AGAGTT-------CT--GTTGG-GATC------GTAACGG---TCTTTAT-------------------T-----CGTC---TCCTTGTAC------------AAGC-------------CTCGCGGCTC-T-----------------TCAG-C-TGCTGCTGCTC--CTC-------GT-----------CCTCTGCGGCGTCGCTCCT------CGTC-GCTGT
droRho1 scf7180000764238:8204-8435 + G----------------------TGTAACGACCTGATTCTTT--ATTTCGT-GCTCGCTACGTAAA-CGTGCGGCTAGCTCAG-AGAGGTTGTGAGTTCGTTCCACCAAATTTATAA----TGAGTGACTGCCCG--TGACCAAAGG-ATAACGCC-AGAAA--------GG--ATTAG-GTTGG--------------------------TGCAG----GTTCATTATT----TC---TCAAAATAT-------------AGC----CTTGTTGCTAGTG------------------------------C-TTTTTCTGCCC--GTT-------GTCGCT------------GCTGCGTCGCTCCTGGCCTGCTACTGCCTT
droFic1 scf7180000451733:23472-23743 + AT-----------------ATATTGTAACGAACTGCTTTTCAC-TATT--T-GCTCGCTACGTAAAACGCGCGGCTAGCTCAGTTGAGTTTGTGTGTTCGTCCCACCAAATTTTTTG--T-TGCGAGAT--CCCG--A--CCAAG-A-AGTACACA--GAATT-------GG--GTTAG-ATT-------TA-------------GCAATAGGCAGCTTGGTTTATTGGT----TC---TCGTTATACAATTGATTCGATGTGA-------------AGTGCTTCTCTCTGGCGACGATATTGCCCTCGTGGACGCC------GGTGA-TGACTCCCACGTCGA-----CTCCTGCGGCGG--------------CAC-GCC-T
droAna3 scaffold_13258:841419-841608 - G----------------------TGTAACGAACTGTTTTTGCTTACTT-TT-CGTCGCAATAAA-T-TCCGCGGCTAGCTCAC-AGAGTTTGGGGGATCGTTCCACCGAATTTATAGATTCAACGTGATTGCTCG--A--GCCCAGAAATAACACA----------GGGTGCTTCTTT---TTATT----GATATCC---CCTTTAT-------------------T-----TGTATATT------------------GTTTACAAAG---------GGTAAATCTC-A-----------------TCGG--------------------------------------------------------------------------
droBip1 scf7180000395258:8678-8928 + AA----------------GATACTGTAACGAACTGTTTTCTTTGCTTC--C-GCTCGCCACAATAT-GCCGCGGCTAGTTCAC-AGAGTCTGCGGGTTAGTTCCACCGAATTTATAG-TTCGACGTGATTGCCCG--A--GCCCAGAAATAATACA-A-A-----TA---GC-----------------------------TTTTATTTTATGCAG----TCTCTTTATTTGC---TGCTCCTTCT------------GTTTAC-------------AATGATGGTT-T-----------------AACCGGGTTCC------CGAGAACGGGCCCCAC-----TCCGAAT----ATTCGTGACCCTTG--GTGCCTC-CTTTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTCTTGATACGGTAAA--TGTAGTGTAACGAACTGATTTTCTTTATTT--C-GCTCGCTACTGGTT-GCAGCGGCAAGATCAG-AGAGTTTGTGTGTTTGTCCCACCAAATTTATGA-TT-TGTGTGATTGCCCG--A--CCAAGGAA--A-CGCA-A-------TAG------------GTTCTT----GATATAGTCG--TTTAT-------------------T--ATGC---TATTTCTCAT------------ATAAGA-------------AATAATCCTC-C-----------------TAGGGAATTAT------GGAGAT-------CTCGCTACT---------CCTGCGGCACTCCTG--TTGCAAC-GCCTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CCAAGGA.............................................................................................................................................................................................................................................2920867.951735900000016556008030000000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CCA.................................................................................................................................................................................................................................................2520454.3090860000000852700005590000
..........................................TTATTT--C-GCTCGCTACTGGTT-GCAG.........................................................................................................................................................................................................................................................................................................................2520358.00716014261611601322206319391011157630712000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CC..................................................................................................................................................................................................................................................2420295.205904060005527100273500203780000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--C...................................................................................................................................................................................................................................................2320187.65375300005600967001051001028147000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--....................................................................................................................................................................................................................................................222068.95137900008551140004100000000
..........................................TTATTT--C-GCTCGCTACTGGTT-GCAGC........................................................................................................................................................................................................................................................................................................................262063.9512790056600414303263163513110000
..........................................TTATTT--C-GCTCGCTACTGGTT-GCA..........................................................................................................................................................................................................................................................................................................................242054.0510810073832003342462176121440000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CCAA................................................................................................................................................................................................................................................262052.3010460001400102036243300108000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CCAAG...............................................................................................................................................................................................................................................272051.251025000000005924320100000
..........................................TTATTT--C-GCTCGCTACTGGTT-GC...........................................................................................................................................................................................................................................................................................................................232048.85977002213640221208254857916132000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCTGCGGCAC....................26648.672920005005866602515000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--.......................................................................................................................................................................................................................................................212043.5087000007080005540530140000
.........................................TTTATTT--C-GCTCGCTACTGGTT-GCAG.........................................................................................................................................................................................................................................................................................................................262039.05781025550025016320459140281000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CCAAGG..............................................................................................................................................................................................................................................282038.507700003300064706700230000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCTGCGGCACTC..................28637.832270001000012302173000
.............................................................................................................................................................................................................................................................................................TC-C-----------------TAGGGAATTAT------GGAGAT-------CTCGC...........................................25734.2924000000016122125101632000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CCAAGGAA--..........................................................................................................................................................................................................................................302023.5547100000015423467160000000
..................................................................................................................................................................................................TAGTCG--TTTAT-------------------T--ATGC---TATTTCTCA...........................................................................................................................................25821.38171000800375525390070000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCTGCGGCACT...................27619.501170000001317101430600000
.........................................TTTATTT--C-GCTCGCTACTGGTT-GC...........................................................................................................................................................................................................................................................................................................................242016.053210042001920731724540000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCTGCGGC......................24614.5087000100211326155240000
................................................................................................................TATGA-TT-TGTGTGATT..............................................................................................................................................................................................................................................................162013.102620000000090253000000
..........................................TTATTT--C-GCTCGCTACTGGTT-GCAT.........................................................................................................................................................................................................................................................................................................................252011.7523500000021022016266000
..........................................TTATTT--C-GCTCGCTACTGGTT-G............................................................................................................................................................................................................................................................................................................................222011.70234000500292321174228015000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCTGCGGCA.....................25610.176100000010821110281000
.........................................TTTATTT--C-GCTCGCTACTGGTT-GCAGC........................................................................................................................................................................................................................................................................................................................272010.10202011500973533225030000
.........................................TTTATTT--C-GCTCGCTACTGGTT-GCA..........................................................................................................................................................................................................................................................................................................................25209.751950002008336301580210000
..........................................................................................................................................................................................................................................................................................................................TAT------GGAGAT-------CTCGCTACT---------CCTGCGGC......................2668.00480000001212878010000
..........................................TTATTT--C-GCTCGCTACTGGTT-.............................................................................................................................................................................................................................................................................................................................21207.75155002100172130142503114000
..................................................................................................................................................................................................TAGTCG--TTTAT-------------------T--ATGC---TATTTCTCAT------------A.............................................................................................................................2787.385900020019195113000000
.....................................................................................................................................................................................................................................................T------------ATAAGA-------------AATAATCCTC-C-----------------TAGGGAATT.....................................................................2756.2031000000158620000000
..........................................................................................................................................................................................................................................................................................TCCTC-C-----------------TAGGGAATTAT------GGAGAT-------CTCGC...........................................2876.00420000001189113000000
..........................................TTATTT--C-GCTCGCTACTGGT...............................................................................................................................................................................................................................................................................................................................20204.108201801607810712076000
..........................................TTATTT--C-GCTCGCTACTGG................................................................................................................................................................................................................................................................................................................................19203.907800003204141601713000
................................................................................................................TATGA-TT-TGTGTGATTGCCC..........................................................................................................................................................................................................................................................20203.65730123100500043000000
.............................................................................................................................................................................................................................................................................................TC-C-----------------TAGGGAATTAT------GGAGAT-------CTCGCT..........................................2673.432400000087510030000
.........................................TTTATTT--C-GCTCGCTACTGGTT-G............................................................................................................................................................................................................................................................................................................................23203.40680000002076371231000
........................................................................GGCAAGATCAG-AGAGTTTGTGTGTT..............................................................................................................................................................................................................................................................................................2533.331000000020701000000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CCAAT...............................................................................................................................................................................................................................................27203.00600001001326870050000
..........................................TTATTT--C-GCTCGCTACT..................................................................................................................................................................................................................................................................................................................................17202.9058000000000058000000
..................................................................................................................................................................................................TAGTCG--TTTAT-------------------T--ATGC---T...................................................................................................................................................1782.8823000000003119000000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCTGCGG.......................2362.671600010011444010000
........................................................................................................................................................................................................................................................................................................................................T-------CTCGCTACT---------CCTGCGGCACTCCTG--T............2662.6716000000210100111000
..................................................................................................................TGA-TT-TGTGTGATTGCCCG--A--CCAAGGA.............................................................................................................................................................................................................................................27202.65530000000400120010000
................................................................................................................TATGA-TT-TGTGTGATTG.............................................................................................................................................................................................................................................................17202.5551000000003048000000
..........................................TTATTT--C-GCTCGCTACTGGTT-GCAGA........................................................................................................................................................................................................................................................................................................................26202.4549001000132000348000
.......................TGTAACGAACTGATTTTCTTT....................................................................................................................................................................................................................................................................................................................................................21202.4549000000813451000000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CCT.................................................................................................................................................................................................................................................25202.4048000130430001000000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCTGCGGCACTCC.................2962.3314000000000000131000
..........................................TTATTT--C-GCTCGCTACTGGTT-GCAA.........................................................................................................................................................................................................................................................................................................................25202.2044001000313510273000
.........................................TTTATTT--C-GCTCGCTACTGGTT-.............................................................................................................................................................................................................................................................................................................................22202.1042000101645641041000
..................................................................................................................................................................................................TAGTCG--TTTAT-------------------T--ATGC---TAT.................................................................................................................................................1982.0016000016000000000000
...................................................................................................................................................................................................................................................................TAAGA-------------AATAATCCTC-C-----------------TAGGGAATT.....................................................................2551.80900000031113000000
.........................................................................................................................................................................................................................................................................................ATCCTC-C-----------------TAGGGAATTA....................................................................1781.7514000000000014000000
.....................................................................................................................................................................TAG------------GTTCTT----GATATAGTCG--TTTAT-------------------..............................................................................................................................................................2431.67500000001400000000
...................................................................................................................................................................................................................................................................................................................................GGAGAT-------CTCGCTACT---------CCTGCGGCACTC..................2761.671000000000100081000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCTGCGGCAA....................2661.671000000000100090000
......................................TTCTTTATTT--C-GCTCGCTACTG.................................................................................................................................................................................................................................................................................................................................22201.65330000000000001914000
.................................................................................................................ATGA-TT-TGTGTGATTGCCCG--A--CCAAGGA.............................................................................................................................................................................................................................................28201.6533000000330000000000
.................................................................................................................................................................................................................................................................................................................................................TCGCTACT---------CCTGCGGCACTCCTG--T............2461.50900000001102131000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCTGCGGCACTCA.................2961.50900000000000090000
......................................................................................................................TT-TGTGTGATTGCCCG--A--CCAAGGA.............................................................................................................................................................................................................................................24201.50300000001011630000000
.................................................................................................................................................................................................................................................................................................................................................TCGCTACT---------CCTGCGGCAC....................1871.431000000800002000000
...................................................................................................................................................................................................................................................................TAAGA-------------AATAATCCTC-C-----------------TAGGGAATTA....................................................................2651.40700010000222000000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--T--....................................................................................................................................................................................................................................................22201.402800006003606007000
..................................................................................................................................................................................................TAGTCG--TTTAT-------------------T--ATGC---TATTTCTCAT------------ATA...........................................................................................................................2951.40700000022210000000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------..............................1681.3811000000000110000000
................................................................................................................TATGA-TT-TGTGTGATTGC............................................................................................................................................................................................................................................................18201.3527000000000027000000
..........................................TTATTT--C-GCTCGCTACTG.................................................................................................................................................................................................................................................................................................................................18201.3026000000047015000000
................................................................................................................TATGA-TT-TGTGTGATTGCCCA--.......................................................................................................................................................................................................................................................21201.3026000026000000000000
................................................................................................................TATGA-TT-TGTGTGATTGCC...........................................................................................................................................................................................................................................................19201.252500810005010208000
......................................................................................................................TT-TGTGTGATTGCCCG--A--CCA.................................................................................................................................................................................................................................................20201.2024000000000024000000
................................................................................................................TATGA-TT-TGTGTGAT...............................................................................................................................................................................................................................................................15201.2024000000024000000000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCTGCGGCACA...................2761.17700000000000061000
........................................................................................................................................................................................................................................................................................................................................T-------CTCGCTACT---------CCTGCGGCACTCCTG--.............2571.14800000000120050000
.............................................................................................................................................................................................................................................................................................TC-C-----------------TAGGGAATTAT------GGAGAT-------CTCGCA..........................................2671.14800000000000080000
.............................................................................................................................................................................................................................................................................................TC-C-----------------TAGGGAATTAT------GGAGAT-------CTCGCTA.........................................2771.14800000040210010000
.......................TGTAACGAACTGATTTTCTTTATT.................................................................................................................................................................................................................................................................................................................................................24201.052100200081901000000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CCAAGGT.............................................................................................................................................................................................................................................29201.0521000000200010000000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CCATT...............................................................................................................................................................................................................................................27201.0020000000001900001000
........................................................................................................................................................................................................................................................................................................................................................T---------CCTGCGGCACTCCTG--TTGCAAC-GCCT.2731.00300300000000000000
.........................................................................................................................................................................................................................................................................................................................TTAT------GGAGAT-------CTCGCTACT---------CCTGCGGC......................2751.00500000031100000000
.............................................................................................................................................................................................................................................................................................TC-C-----------------TAGGGAATTAT------GGAGAT-------CTCG............................................2471.00700000013030000000
........................................................................................................................................................................................................................................................................................AATCCTC-C-----------------TAGGGAATTA....................................................................1881.00800000000008000000
................................................................................................................................................................................................TATAGTCG--TTTAT-------------------T--ATGC---T...................................................................................................................................................1951.00500000000005000000
.....................................................................................................................................................................TAG------------GTTCTT----GATATAGTCG--TTTAT-------------------T--A..........................................................................................................................................................2631.00300000000300000000
......................................TTCTTTATTT--C-GCTCGCTACTGGT...............................................................................................................................................................................................................................................................................................................................24200.9519000000113100103000
.......................TGTAACGAACTGATTTTCTT.....................................................................................................................................................................................................................................................................................................................................................20200.951900200070811000000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CT..................................................................................................................................................................................................................................................24200.9018000100013000004000
..........................................TTATTT--C-GCTCGCTACTGGTT-GCAC.........................................................................................................................................................................................................................................................................................................................25200.901800300002021082000
..................................................................................................................................................................................................TAGTCG--TTTAT-------------------T--ATGC---TATTTCTCAT------------..............................................................................................................................2680.88700000010030030000
..............................................................................................................TTTATGA-TT-TGTGTGATTGCCCG--A--CC..................................................................................................................................................................................................................................................26200.851700000006560000000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCTGCGGCACTA..................2860.83500000000000032000
..........................................................................................................................................................................................................................................................................................................................TAT------GGAGAT-------CTCGCTACT---------CCTGCGG.......................2560.83500000000005000000
.......................TGTAACGAACTGATTTTCT......................................................................................................................................................................................................................................................................................................................................................19200.801600000003319000000
..........................................TTATTT--C-GCTCGCTACTGGTT-GCATA........................................................................................................................................................................................................................................................................................................................26200.8016000000010000141000
.................................................................................................................ATGA-TT-TGTGTGATTGCCCG--A--CC..................................................................................................................................................................................................................................................23200.7515000130000002000000
...............................................................................................................TTATGA-TT-TGTGTGATTGCCCG--A--CCA.................................................................................................................................................................................................................................................26200.7515000000110031000000
..................................................................................................................................................................................................TAGTCG--TTTAT-------------------T--ATGC---....................................................................................................................................................1680.75600000000006000000
......................................................................................................................................................................AG------------GTTCTT----GATATAGTCG--TTTAT-------------------T--A..........................................................................................................................................................2540.75300000001020000000
..................................................................................................................................................................................................TAGTCG--TTTAT-------------------T--ATGC---TA..................................................................................................................................................1880.75600000000015000000
.........................................TTTATTT--C-GCTCGCTACTGGTT-GCAT.........................................................................................................................................................................................................................................................................................................................26200.7515000000010000131000
.............................................................................................................................................................................................................................................................................................TC-C-----------------TAGGGAATTAT------GGAGAT-------CTCGCTAC........................................2870.71500000002100020000
........................................................................................................................................................................................................................................................................................................................................T-------CTCGCTACT---------CCTGCGGCACTC..................2270.71500210000001010000
..................................................................................................................................................................................................................................................................................................................TAGGGAATTAT------GGAGAT-------CTCGCTACT---------..............................2670.71500000003110000000
..........................................TTATTT--C-GCTCGCTACTGGTT-T............................................................................................................................................................................................................................................................................................................................22200.7014000000000000410000
...............................................................................................................TTATGA-TT-TGTGTGATTGCCCG--A--CCAAGGA.............................................................................................................................................................................................................................................30200.7014000000120200000000
...........................................TATTT--C-GCTCGCTACTGGTT-GCAGC........................................................................................................................................................................................................................................................................................................................25200.701400060032300000000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCTGCGGT......................2460.67400000001300000000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCTGCGGCACAA..................2860.67400000000000040000
..........................................................................................................................................................................................................................................................................................................................TAT------GGAGAT-------CTCGCTACT---------CCTGCGGCA.....................2760.67400000000021010000
...........................................................................AAGATCAG-AGAGTTTGTGTGTTTGT...........................................................................................................................................................................................................................................................................................2530.67200000010100000000
...........................................................................................................................................................................................................................................................................................................................AT------GGAGAT-------CTCGCTACT---------CCTGCGGC......................2560.67400000011200000000
...........................................................................................................................................................................................................................................................................................................................AT------GGAGAT-------CTCGCTACT---------CCTGCGGCAC....................2760.67400000012000010000
.....................................................................AGCGGCAAGATCAG-AGAGTTTGTGTG................................................................................................................................................................................................................................................................................................2630.67200000000200000000
.....................................................................................................................................................................................................................................................................................................................................AGAT-------CTCGCTACT---------CCTGCGGCACTC..................2560.67400000000000040000
.........................................TTTATTT--C-GCTCGCTACT..................................................................................................................................................................................................................................................................................................................................18200.6513001000000012000000
...................................................................................................................GA-TT-TGTGTGATTGCCCG--A--CCAAGGA.............................................................................................................................................................................................................................................26200.651300000076000000000
..................................................................................................................................................................................................TAGTCG--TTTAT-------------------T--ATGC---TATTTCTC............................................................................................................................................2480.63500000001012001000
.................................................................................................................................................................................................................................................................................................................................................TCGCTACT---------CCTGCGGCACTCCTG--TTG..........2650.60300010000200000000
.....................................................................................................................................................................................................................................................T------------ATAAGA-------------AATAATCCTC-C-----------------TAGGGAAT......................................................................2650.60300000000210000000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CCAAGGAA--A-........................................................................................................................................................................................................................................31200.601200000000750000000
..................................................................................................................................................................................................................................................................................................................TAGGGAATTAT------GGAGAT-------CTCGCTACT---------C.............................2750.60300000000012000000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CCAAGGC.............................................................................................................................................................................................................................................29200.6012000000201000000000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CTT.................................................................................................................................................................................................................................................25200.501000100000000090000
..........................................................................................................................................................................................................................................................................................................................TAT------GGAGAT-------CTCGCTACT---------..............................1880.50400000000004000000
.................................................................................................................................................................................................................................................................................................................................................TCGCTACT---------CCTGCGGCACTCCTG--TAA..........2660.50300000000000030000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCTGCGGCACTT..................2860.50300000000000030000
..........................................TTATTT--C-GCTCGCTACTGGTT-GCT..........................................................................................................................................................................................................................................................................................................................24200.501000000000212041000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CCAT................................................................................................................................................................................................................................................26200.501000040000000006000
....................................................GCTCGCTACTGGTT-GCAG.........................................................................................................................................................................................................................................................................................................................18200.5010000000000010000000
...................................................................................................................................................................................................................................................................................................................................GGAGAT-------CTCGCTACT---------CCTGCGGCACT...................2660.50300000000000030000
..........................................TTATTT--C-GCTCGCTACTGGTT-GCAAA........................................................................................................................................................................................................................................................................................................................26200.501000010000010080000
..........................................................................................................................................................................................................................................................................................................................TAT------GGAGAT-------CTCGCTACT---------CCTGCGGCAC....................2860.50300000001200000000
.......................................................................................................................................................................................................................................................................................TAATCCTC-C-----------------TAGGGAATTAT------GGAGA........................................................2580.50400000000103000000
........................................CTTTATTT--C-GCTCGCTACTGGTT-GC...........................................................................................................................................................................................................................................................................................................................25200.45900000061200000000
.........................................TTTATTT--C-GCTCGCTACTGGT...............................................................................................................................................................................................................................................................................................................................21200.45900100031112000000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CCAC................................................................................................................................................................................................................................................26200.45900020000040030000
....................................................................................................................A-TT-TGTGTGATTGCCCG--A--CCA.................................................................................................................................................................................................................................................21200.45900000000009000000
..........................................................................................................................................................................................................................................................................................TCCTC-C-----------------TAGGGAATTAT------GGAGAT-------CTCGCT..........................................2970.43300000011010000000
......................................................................................................................................................................................................................................................................................................................................................ACT---------CCTGCGGCACTC..................1570.43300000000003000000
..................................................................................................................................................................................................................................................................................................................TAGGGAATTAT------GGAGAT-------CTCGCTAC........................................2570.43300000000100020000
....................................TTTTCTTTATTT--C-GCTCGCTACTGGT...............................................................................................................................................................................................................................................................................................................................26200.40800010023200000000
..........................................TTATTT--C-GCTCGCTACTGGTT-GT...........................................................................................................................................................................................................................................................................................................................23200.40800000010000052000
.......................TGTAACGAACTGATTTTCTTTATTT--C-GCT.........................................................................................................................................................................................................................................................................................................................................29200.40800000051002000000
..................................................................................................................................................................................................................................................................................................................................................CGCTACT---------CCTGCGGCACTCCTG--TTG..........2550.40200020000000000000
.....................................................................................................................................................................................................................................................T------------ATAAGA-------------AATAATCCTC-C-----------------TAGGGAATTA....................................................................2850.40200000020000000000
..................................................................................................................................................................................................................................................................................................................TAGGGAATTAT------GGAGAT-------CTCGCTACT---------CC............................2850.40200000020000000000
...........................................TATTT--C-GCTCGCTACTGGTT-GCAG.........................................................................................................................................................................................................................................................................................................................24200.40800020000211020000
.....................................................................................................................................................................................................................................................T------------ATAAGA-------------AATAATCCTC-C-----------------TAGGGA........................................................................2450.40200000010100000000
.......................................................................................................................T-TGTGTGATTGCCCG--A--C...................................................................................................................................................................................................................................................17200.40800000000008000000
........................................................................................................................................................................................................................................................................................AATCCTC-C-----------------TAGGGAATTAT------GGAGAT-------C...............................................2680.38300000000003000000
...................................................................................................................................................................................................AGTCG--TTTAT-------------------T--ATGC---TA..................................................................................................................................................1780.38300000000003000000
..................................................................................................................................................................................................TAGTCG--TTTAT-------------------T--ATGC---TATTTCTCAA------------..............................................................................................................................2680.38300000000000030000
.................................................................................................................ATGA-TT-TGTGTGATTGCCCG--A--CCAAGG..............................................................................................................................................................................................................................................27200.35700040010200000000
.........................................TTTATTT--C-GCTCGCTACTGG................................................................................................................................................................................................................................................................................................................................20200.35700000010000042000
................................................................................................................................................................................................................................................................................................................................................CTCGCTACT---------CCTGCGGCACTCCTG--T............2560.33200000002000000000
.................................................................................................................................TGCCCG--A--CCAAGGAA--A-CGCA-A-------TAG------------G...........................................................................................................................................................................................................25180.33600000011400000000
...................................................................................................................................................A--A-CGCA-A-------TAG------------GTTCTT----GATATAGTCG--T.....................................................................................................................................................................................2730.33100000000100000000
......................................................................................................................................................A-CGCA-A-------TAG------------GTTCTT----GATATAGTCG--TT....................................................................................................................................................................................2730.33100000000100000000
...................................................................................................................................................................................................................................................................................................................................GGAGAT-------CTCGCTACT---------CCTGCGGCACTA..................2760.33200000000000020000
..........................................................................................................................................................................................................................................................................................................................TAT------GGAGAT-------CTCGCTACT---------CCTGCGGCAA....................2860.33200000000020000000
..................................................................................................................................................................................................TAGTCG--TTTAT-------------------T--ATG........................................................................................................................................................1590.33300000000111000000
........................................................................................................................................................................................................................................................................................................................................................T---------CCTGCGGCACTCCTG--TTGCAAC-GCCG.2730.33100100000000000000
........................................................................GGCAAGATCAG-AGAGTTTGTGTGTTT.............................................................................................................................................................................................................................................................................................2630.33100000000100000000
....................................................................................................................................................................................................................................................................................................................................................................TGCGGCACTCCTG--TTGCAAC-GCCT.2430.33100100000000000000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCT...........................1960.33200000000002000000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCTGCGGTT.....................2560.33200000001010000000
........................................................................GGCAAGATCAG-AGAGTTTGTGTGT...............................................................................................................................................................................................................................................................................................2430.33100000000001000000
...................................................................................................................................................................................................................................................................................................................................GGAGAT-------CTCGCTACT---------CCTGCGGCAA....................2560.33200000000000020000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCTGCGGCACTAA.................2960.33200000000000020000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------C.............................1760.33200000000002000000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCTGCGGCACTCAA................3060.33200000000000020000
..........................................................................CAAGATCAG-AGAGTTTGTGTGTTTGTC..........................................................................................................................................................................................................................................................................................2730.33100000000100000000
droSec2
GTTCTGTTTAA----A--CAT-GTGTAACGAACTGATTTTCTTTATGT--C-GCCCGCTACTGATT-GCAGCGGCTAGCTCAG-AGAGTTTGCGCGTTCGTCCCACCAAATTTATGA-TT-TGTGTGATTGCCCG--A--CCAATGAA--A-AGCA-A-------TAG------------GTTCTT----GATATAGTCG--TTTAT-------------------T--ATGC---TATTTCTAAT------------ATAAGA-------------AATAATTCTT-C-----------------TAGAGAATTAT------GGAGAT-------CTCGCTACT---------CCTGCGGCGCTCCTG--TTGCAAC-GCCTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................TAG------------GTTCTT----GATATAGTCG--TTTAT-------------------..............................................................................................................................................................242013.4026821553513
.............................................................................................................................................................................................................................................................................................TT-C-----------------TAGAGAATTAT------GGAGAT-------CTCG............................................24206.75135430893
.....................................................................................................................................................................TAG------------GTTCTT----GATATAGTCG--TTTA..................................................................................................................................................................................23202.9058340213
.....................................................................................................................................................................TAG------------GTTCTT----GATATAGTCG--TTTAT-------------------T--...........................................................................................................................................................25202.204441300
.....................................................................................................................................................................TAG------------GTTCTT----GATATAGTCG--TTTAT-------------------T--A..........................................................................................................................................................26202.004034042
........................................................................................................................................................................................................................................................................................................................................................T---------CCTGCGGCGCTCCTG--TTGCAAC-GCC..26201.653332100
.............................................................................................................................................................................................................................................................................................TT-C-----------------TAGAGAATTAT------GGAGAT-------CT..............................................22201.603241252
.............................................................................................................................................................................................................................................................................................TT-C-----------------TAGAGAATTAT------GGAGAT-------CTC.............................................23201.452929000
.............................................................................................................................................................................................................................................................................................TT-C-----------------TAGAGAATTAT------GGAGAT-------CTCGC...........................................25201.302600251
.................................................................T-GCAGCGGCTAGCTCAG-AGAGTTTG....................................................................................................................................................................................................................................................................................................25201.152301166
........................................................................................................................................................................................................................................................................................................................................................T---------CCTGCGGCGCTCCTG--TTGCAAC-GCCT.27201.002019010
.....................................................................................................................................................................................................................................................................................................................................................TACT---------CCTGCGGCGCTCCTG--TTGCAAC-.....26200.751511040
....................................................................................................................................................................................................................................................................................................................................................................TGCGGCGCTCCTG--TTGCAAC-GCCTT25200.701411021
.............................................................TGATT-GCAGCGGCTAGCTCAG-A...........................................................................................................................................................................................................................................................................................................22200.651310021
..............................................................................................................................................................................................................................................................................................T-C-----------------TAGAGAATTAT------GGAGAT-------CTCGC...........................................24200.551111000
.....................................................................................................................................................................TAG------------GTTCTT----GATATAGTCG--TTT...................................................................................................................................................................................22200.55118030
................................................................TT-GCAGCGGCTAGCTCAG-AGAGTTTG....................................................................................................................................................................................................................................................................................................26200.55115006
........................................................................................................................................................................................................................................................................................................................................................T---------CCTGCGGCGCTCCTG--TTGCAAC-GC...25200.501010000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CC..................................................................................................................................................................................................................................................24200.4593060
....................................................................................................................................................................................................................................................................................................................................................................TGCGGCGCTCCTG--TTGCAAC-GCCT.24200.4599000
.............................................................................................................................................................................................................................................................................................TT-C-----------------TAGAGAATTAT------GGAGAT-------CTCGCT..........................................26200.4599000
.................................TGATTTTCTTTATGT--C-GCCCGCTAC...................................................................................................................................................................................................................................................................................................................................2590.4443010
..................................GATTTTCTTTATGT--C-GCCCGCTAC...................................................................................................................................................................................................................................................................................................................................2490.4444000
....................................................................................................................................................................................................................................................................................................................................................................TGCGGCGCTCCTG--TTGCAAC-GCC..23200.3576010
.............................................................TGATT-GCAGCGGCTAGCTCAG-AGAGTT......................................................................................................................................................................................................................................................................................................27200.3575011
.............................................................TGATT-GCAGCGGCTAGCTCAG-AGAG........................................................................................................................................................................................................................................................................................................25200.3570052
.....................................................................................GAGTTTGCGCGTTCGTCCCACCAA...................................................................................................................................................................................................................................................................................2430.3311000
.......................................................................................................................T-TGTGTGATTGCCCG--A--CCAATGAA--A-AGC.....................................................................................................................................................................................................................................2830.3311000
..........................................................................................................................GTGTGATTGCCCG--A--CCAATGAA--A-A.......................................................................................................................................................................................................................................2430.3311000
.................................TGATTTTCTTTATGT--C-GCCCGCTA....................................................................................................................................................................................................................................................................................................................................2490.3332001
.....................................................................................GAGTTTGCGCGTTCGTCCCAC......................................................................................................................................................................................................................................................................................2130.3311000
....................................................................................AGAGTTTGCGCGTTCGTCCCAC......................................................................................................................................................................................................................................................................................2230.3311000
......................................................................................................................................................................AG------------GTTCTT----GATATAGTCG--TTTAT-------------------T--...........................................................................................................................................................24200.2554010
.............................................................................................................................................................................................................................................................................................TT-C-----------------TAGAGAATTAT------GGAGAT-------CTCGCTAC........................................28200.2555000
..................................................................................................................TGA-TT-TGTGTGATTGCCCG--A--CCAA................................................................................................................................................................................................................................................24200.2555000
.....................................................................................................................................................................TAG------------GTTCTT----GATATAGTCG--TTTAT-------------------T--ATGC---....................................................................................................................................................29200.2555000
...........................ACGAACTGATTTTCTTTATGT--C-GCC.........................................................................................................................................................................................................................................................................................................................................2590.2221010
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CCAA................................................................................................................................................................................................................................................26200.2043010
.......................................................................................................................................................................................................................................................................................................................................................CT---------CCTGCGGCGCTCCTG--TTGCAAC-GCCT.28200.2044000
.....................................................................................................................................................................................................................................................................................................................................................TACT---------CCTGCGGCGCTCCTG--TTGCAA.......25200.2041030
..............................................................................................................................................................................................................................................................................................T-C-----------------TAGAGAATTAT------GGAGAT-------CTCG............................................23200.2044000
........................................................................................................................................................................................................................................................................................................................................................T---------CCTGCGGCGCTCCTG--TTGCAA.......22200.1531020
..................................................................................................................................................................................................................................................................................................................................................................CCTGCGGCGCTCCTG--TTGCAAC-G....23200.1533000
......................................................................................................................................................................AG------------GTTCTT----GATATAGTCG--TTTAT-------------------T--A..........................................................................................................................................................25200.1533000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--....................................................................................................................................................................................................................................................22200.1533000
..............................................................................................................TTTATGA-TT-TGTGTGATTGCCCG--A--CCAA................................................................................................................................................................................................................................................28200.1533000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--C...................................................................................................................................................................................................................................................23200.1531020
.................................................................T-GCAGCGGCTAGCTCAG-AGAGT.......................................................................................................................................................................................................................................................................................................22200.1532010
..................................................................................................................................................................................................................................................................................................................................................................CCTGCGGCGCTCCTG--TTGCAAC-GCC..25200.1533000
......................................................................................................................................................................................................................................................................................................................................................ACT---------CCTGCGGCGCTCCTG--TTGCAAC-GC...27200.1533000
........................................................................................................................................................................................................................................................................................................................................................T---------CCTGCGGCGCTCCTG--TTGCAAC-.....23200.1532010
.....................................................................................................................................................................................................................................................................................................................................................TACT---------CCTGCGGCGCTCCTG--TTGCAAC-GC...28200.1533000
.........................................................................................................................................................GCA-A-------TAG------------GTTCTT----GATATAGTCG--TT....................................................................................................................................................................................25200.1530030
.....................................................................................................................................................................................................................................................................................................................................................TACT---------CCTGCGGCGCTCCTG--TTGCAAC-GCC..29200.1533000
.............................................................TGATT-GCAGCGGCTAGCTCAG-............................................................................................................................................................................................................................................................................................................21200.1533000
...................................ATTTTCTTTATGT--C-GCCCGCTACTGA................................................................................................................................................................................................................................................................................................................................2680.1311000
..................................GATTTTCTTTATGT--C-GCCCGCTACT..................................................................................................................................................................................................................................................................................................................................2590.1111000
.................................TGATTTTCTTTATGT--C-GCCCGCTACT..................................................................................................................................................................................................................................................................................................................................2690.1111000
...................................ATTTTCTTTATGT--C-GCCCGCTAC...................................................................................................................................................................................................................................................................................................................................2390.1111000
......................................................................................................................................................................................................................................................................................................................................................ACT---------CCTGCGGCGCTCCTG--TTGCAAC-GCCT.29200.1022000
..........................................................TACTGATT-GCAGCGGCTAGCTC...............................................................................................................................................................................................................................................................................................................22200.1021010
............................................................................................................................................................................................................................................................................................CTT-C-----------------TAGAGAATTAT------GGAGAT-------CTCG............................................25200.1021010
.............................................................TGATT-GCAGCGGCTAGCTCAG-AGAGT.......................................................................................................................................................................................................................................................................................................26200.1020011
.....................................................................................................................................................................TAG------------GTTCTT----GATATAGTC.........................................................................................................................................................................................18200.1020020
................................................................TT-GCAGCGGCTAGCTCAG-A...........................................................................................................................................................................................................................................................................................................19200.1022000
.....................................................................................................................................................................................................................................................................................................................................................TACT---------CCTGCGGCGCTCCTG--TTG..........22200.1022000
..............................................................................................................TTTATGA-TT-TGTGTGATTGCCCG--.......................................................................................................................................................................................................................................................23200.1020110
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCTGCGGCGC....................26200.1022000
.......................................................................................................................................................................G------------GTTCTT----GATATAGTCG--TTTAT-------------------..............................................................................................................................................................22200.1022000
.....................................................................................................................................................................................................................................................................................................................................................TACT---------CCTGCGGCGCTCCTG--TTGCAAC-G....27200.1022000
..............................................................................................................................................................................................................................................................................................T-C-----------------TAGAGAATTAT------GGAGAT-------CTCGCT..........................................25200.1021010
.....................................................................................................................................................................................................................................................................................................................................................TACT---------CCTGCGGCGCTCCTG--TT...........21200.1022000
..................................................................................................................................................................................................................................................................................................................................................................CCTGCGGCGCTCCTG--TTGCAAC-GCCT.26200.1022000
.............................................................................................................................................................................................................................................................................................TT-C-----------------TAGAGAATTAT------GGAGAT-------................................................20200.1022000
.....................................................................................................................................................................TAG------------GTTCTT----GATATAGTCG--TT....................................................................................................................................................................................21200.1021010
.........................................................................................................................................................................................................................................................................................................................TTAT------GGAGAT-------CTCGCTACT---------CCTGCGG.......................26180.0611000
...........................................................................................................................................................................................................................................................................................................................AT------GGAGAT-------CTCGCTACT---------CCTGCGGCG.....................26190.0511000
..........................................................................................................................................................................................................................................................................................................................TAT------GGAGAT-------CTCGCTACT---------CCTGCGG.......................25190.0511000
...................................................................................................................................................................................................................................................................................................................................................GCTACT---------CCTGCGGCGCTCCTG--TTGC.........25190.0511000
..........................................................................................................................................................................................................................................................................................................................TAT------GGAGAT-------CTCGCTACT---------CCTGCGGC......................26190.0511000
........................................................................................................................................................................................................................................................................................................................................T-------CTCGCTACT---------CCTGCGGCGCTCCTG--.............25190.0511000
..........................................................................................................................................................CA-A-------TAG------------GTTCTT----GATATAGTCG--TTTAT-------------------..............................................................................................................................................................27200.0511000
..................................................................................................................................................................................................................................................................................................................................................................CCTGCGGCGCTCCTG--TTGCAAC-GC...24200.0511000
.....................................................................................................................................................................TAG------------GTTCTT----GATATAGTG.........................................................................................................................................................................................18200.0510010
...................................................................GCAGCGGCTAGCTCAG-AGAG........................................................................................................................................................................................................................................................................................................20200.0511000
.......................TGTAACGAACTGATTTTCTT.....................................................................................................................................................................................................................................................................................................................................................20200.0511000
..........................................................TACTGATT-GCAGCGGCTAGCTCAG-............................................................................................................................................................................................................................................................................................................24200.0510010
.........................................................................................................................................................................................................................................................................................ATTCTT-C-----------------TAGAGAATTAT------GGAGAT-------C...............................................25200.0511000
................................................................................................................................................................................................................................................................................................C-----------------TAGAGAATTAT------GGAGAT-------CTCGC...........................................23200.0511000
............................................................................................................................................................................................................................................................................................................................T------GGAGAT-------CTCGCTACT---------CCTGCGGCT.....................25200.0511000
.....................................................................................................................................................................................................................................................................................................................................................................GCGGCGCTCCTG--TTGCAAC-GCC..22200.0511000
.................................................................................................TCGTCCCACCAAATTTATGA-TT-T......................................................................................................................................................................................................................................................................23200.0510100
..................................................................................................................................................................................................................................................................................................................TAGAGAATTAT------GGAGAT-------CTCGCTACT---------C.............................27200.0511000
........................................................................................................................................................AGCA-A-------TAG------------GTTCTT----GATATAGTCG--TT....................................................................................................................................................................................26200.0511000
.....................................................................................................................................................................TAG------------GTTCTT----GATATAGTCG--TTTAT-------------------T--ATG........................................................................................................................................................28200.0511000
.............................................................TGATT-GCAGCGGCTAGCTCA..............................................................................................................................................................................................................................................................................................................20200.0511000
.............................................................................................................................................................................................................................................................................................TT-C-----------------TAGAGAATTAT------GGAGAT-------C...............................................21200.0511000
......................................................................................................................................................................................................................................................................................................................................................ACT---------CCTGCGGCGCTCCTG--TTGCAAC-.....25200.0511000
.........................................................CTACTGATT-GCAGCGGCTAGCTCA..............................................................................................................................................................................................................................................................................................................24200.0510010
...............................................................................................................TTATGA-TT-TGTGTGATTGCCCG--A--....................................................................................................................................................................................................................................................23200.0510010
.....................................................................................................................................................................TAG------------GTTCTT----GATATAGTCG--TTTAT-------------------A--...........................................................................................................................................................25200.0511000
......................................................................................................................................................A-AGCA-A-------TAG------------GTTCTT----GATATAGTCG--TT....................................................................................................................................................................................27200.0510010
......................................................................................................................................................................AG------------GTTCTT----GATATAGTCG--TT....................................................................................................................................................................................20200.0511000
......................................................................................................................................................................................................................................................................................................................................................................CGGCGCTCCTG--TTGCAAC-GCC..21200.0511000
.................................................................T-GCAGCGGCTAGCTCAG-AA..........................................................................................................................................................................................................................................................................................................19200.0511000
..............................................................................................................................................................................................................................................................................................T-C-----------------TAGAGAATTAT------GGAGAT-------CT..............................................21200.0511000
............................................................................................................................................................................................................................................................................................CTT-C-----------------TAGAGAATTAT------GGAGAT-------CTC.............................................24200.0511000
.............................................................TGATT-GCAGCGGCTAGCTC...............................................................................................................................................................................................................................................................................................................19200.0511000
...........................................................................................................................................................................................................................................................................................TCTT-C-----------------TAGAGAATTAT------GGAGAT-------CTC.............................................25200.0511000
..................................................................................................................................................AA--A-AGCA-A-------TAG------------GTTCTT----GATATAGTC.........................................................................................................................................................................................26200.0510010
..................................................................................................................................................................................................................................T--ATGC---TATTTCTAAT------------ATAAGA-------------AATAA......................................................................................................26200.0510010
................................................................TT-GCAGCGGCTAGCTCAG-AA..........................................................................................................................................................................................................................................................................................................20200.0511000
........................................................................................................................................................................................................................................................................................................................................................T---------CCTGCGGCGCTCCTG--TTGCAAA-.....23200.0511000
.................................................................................................TCGTCCCACCAAATTTATGA-TT-TGTG...................................................................................................................................................................................................................................................................26200.0511000
......................................................................................................................................................................................................................................TGC---TATTTCTAAT------------ATAAGA-------------...........................................................................................................19200.0511000
.............................................................................................................................................................................................................................................................................................TT-C-----------------TAGAGAATTAT------GGAG.........................................................18200.0510010
.....................................................................................................................................................................................................................................................................................................................................................TACT---------CCTGCGGCGCTCCTG--.............19200.0511000
..................................................................................................................................................AA--A-AGCA-A-------TAG------------GTTCTT----GATATAGTCG--T.....................................................................................................................................................................................28200.0511000
.....................................................................................................................................................................................TTCTT----GATATAGTCG--TTTAT-------------------T--ATGC---TA..................................................................................................................................................27200.0510010
......................................................................................................................................................................AG------------GTTCTT----GATATAGTCG--TTTA..................................................................................................................................................................................22200.0511000
............................................................CTGATT-GCAGCGGCTAGCT................................................................................................................................................................................................................................................................................................................19200.0511000
......................................................................................................................................................................AG------------GTTCTT----GATATAGTCG--TTA...................................................................................................................................................................................21200.0511000
..........................................................TACTGATT-GCAGCGGCTAGC.................................................................................................................................................................................................................................................................................................................20200.0511000
......................................................................................................................................................................................................................................................................................................................................................ACT---------CCTGCGGCGCTCCTG--TTG..........21200.0511000
.....................................................................................................................................................................TAG------------GTTCTT----GATATAGTCG--TTTAT-------------------T--AT.........................................................................................................................................................27200.0510010
........................................................................................................................................................................................................................................................................................................................................................................GCGCTCCTG--TTGCAAC-GCCTT21200.0511000
.....................................................................................................................................................................TAG------------GTTCTT----GATATAGTCG--TTTAC-------------------..............................................................................................................................................................24200.0511000
..............................................................................................................................................................................................................................................................................................T-C-----------------TAGAGAATTAT------GGAGAT-------CTC.............................................22200.0511000
......................................................................................................................................................................................TCTT----GATATAGTCG--TTTAT-------------------..............................................................................................................................................................19200.0511000
.............................................................TGATT-GCAGCGGCTAGCTCAG-AGA.........................................................................................................................................................................................................................................................................................................24200.0511000
........................................................................................................................................................AGCA-A-------TAG------------GTTCTT----GATATAGTC.........................................................................................................................................................................................23200.0510010
..................................................................................................................................................................................................................................................................................................................TAGAGAATTAT------GGAGAT-------CTCGCTAC........................................25200.0511000
.................................................................T-GCAGCGGCTAGCTCAG-AGAG........................................................................................................................................................................................................................................................................................................21200.0511000
........................................................................................................................................................................................................................................................................................................................................T-------CTCGCTACT---------CCTGCGGCGC....................20200.0511000
.............................................................................................................................................................................................................................................................................................TT-C-----------------TAGAGAATTAT------GGAGA........................................................19200.0510010
........................................................................................................................................................................................................................................................................................................................................................T---------CCTGCGGCGCTCCTG--TTGCAAC-GCCTT28200.0511000
..........................................................TACTGATT-GCAGCGGCTAGCTCAG-A...........................................................................................................................................................................................................................................................................................................25200.0510010
................................................................................................................................................................................................................................................................................................C-----------------TAGAGAATTAT------GGAGAT-------CT..............................................20200.0510010
.......................................................CGCTACTGATT-GCAGCGGCTAGCTCA..............................................................................................................................................................................................................................................................................................................26200.0511000
........................GTAACGAACTGATTTTCTTT....................................................................................................................................................................................................................................................................................................................................................20200.0511000
.............................................................TGATT-GCAGCGGCTAGCT................................................................................................................................................................................................................................................................................................................18200.0511000
.............................................................TGATT-GCAGCGGCTAGCTCTT-T...........................................................................................................................................................................................................................................................................................................22200.0510010
.....................................................................................................................................................................................................................................................................................................................................................................GCGGCGCTCCTG--TTGCAAC-GC...21200.0511000
..................................................................................................................................................................................................................................T--ATGC---TATTTCTAAT------------ATAAGA-------------AATA.......................................................................................................25200.0511000
.........................................................CTACTGATT-GCAGCGGCTAGC.................................................................................................................................................................................................................................................................................................................21200.0511000
........................................................................................................................................................................................................................................................................................................................................................T---------CCTGCGGCGCTCCTG--TTGCAAC-GCCC.27200.0511000
.............................................................................................................................................................................................................................................................................................TT-C-----------------TAGAGAATTAT------GGAGAT-------CTCGA...........................................25200.0511000
.......................................................................................................................................................................................CTT----GATATAGTCG--TTTAT-------------------T--ATGC---TAT.................................................................................................................................................26200.0511000
.....................................................................................................................................................................................................................................................................................................................................................TACT---------CCTGCGGCGCTCCTG--TTGC.........23200.0511000
.......................................................................................................................................................................................................................................................................................................................................................CT---------CCTGCGGCGCTCCTG--TTGCAAC-GC...26200.0511000
........................................................................................................................................................................................................................................................................................AATTCTT-C-----------------TAGAGAATTAT------GGAGA........................................................24200.0511000
...................................................................GCAGCGGCTAGCTCAG-AGAGTTTG....................................................................................................................................................................................................................................................................................................24200.0510010
dm3
T------------------GTGTTGTAACGAACTGATTTTCTT-ATTT--C-GCTCGCTACGGTTT-GCAGCGGCTAGCTCAG-AGAGTTTGTGCGTTCGTCCCACCAAATTTATGA-TT-TGTGTGATTGCCCG--A--CCAAGGAA--A-AGCA-A-------TGG------------GTTCTT----ATGATAGCCG--TTTAT-------------------T--CTAC---TGTTGTATATAT------------AATT-------------AA---TT--------------------------------C------GGCGAT-------CTCGCTGCT---------CCTGCGTCGCTTTTC--CTGCAAC-GCCTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................TT-GCAGCGGCTAGCTCAG-AGAGTTTG....................................................................................................................................................................................................................................................................................................2620158.30316600000000000000000000000200000000000030701672000201901242300022100000000000000000000000000000000000000000000000000000000000000000000000000010001204071984671001533142000000000000000000000000000000000310178025370170395000002048801810301610005701531450540141134266200000000000100000000000000000000000000000011000000000000000010000012452310000004242110000000000000005060000000
...............................................................TTT-GCAGCGGCTAGCTCAG-AGAGTTTG....................................................................................................................................................................................................................................................................................................27160.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000001012000000000000000000000000000000000000050110001500000020313010000000020002130000000000000000000000000000000000000000000000000000000000000000000200000000110000000000000000000000000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CCAAG...............................................................................................................................................................................................................................................272040.608120001000000000000000000200000000000000020002000008000200001000000000000000000000000700120000000000000000000000000000300000000000000000070000000300000000500400000000000000000000010000000000010005000000000010000000000000015901188221190000000000000000000000000000000000000000000000000000000000000000000030100000005111000000000000000010000000
.................................................................T-GCAGCGGCTAGCTCAG-AGAGTTTG....................................................................................................................................................................................................................................................................................................252039.0578100000000100000000000000100000000000040401131080005000211000200000000000000000000000000000000000000000000000000000000000000000000000010000000011010002240507841000000000000000000000000000000000101003100401240000002174510290320001806010507105000000000010300000000000000000000000000000000000000000000000300000100580000001448423000000000000000773000000
.........................................TT-ATTT--C-GCTCGCTACGGTTT-GCAG.........................................................................................................................................................................................................................................................................................................................25132.00320000000000000000000000100000010000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000090400030000000000000000000000000000000000000000000000000000000000000000000032000000000000000000000000311000000
......................................................................................................................................................................................................................................TAC---TGTTGTATATAT------------AATT-------------AA---TT--------------------------------C------GGC..........................................................27131.003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000010000000000000000000000000100000000000000000501404040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TT-ATTT--C-GCTCGCTACGGTTT-GCAGC........................................................................................................................................................................................................................................................................................................................26131.00310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000200000000000000000000000000000000000000000000000000002000000000000000000000000080402220000000000000000000000000000000000000000000000000000000000000000000020000000200000000000000001011000000
.........................................TT-ATTT--C-GCTCGCTACGGTTT-GC...........................................................................................................................................................................................................................................................................................................................23124.00240000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000004000000000000000000000000000000000000000000000000000000000000000000000000000000010200300000000000000000000000000000000000000000000000000000000000003000000012000000210000000000000000211000000
.................................TGATTTTCTT-ATTT--C-GCTCGCTAC...................................................................................................................................................................................................................................................................................................................................241523.533530000000000000000000000000000000000000000010001002000000002010000000000000000000000000030000000002000000000000000000200000000000100401012010000034201401007920000000000000000000000000000000011506040060000000030000000001101440170106111210000000000000000000000000000000000000000000000000000000000000000016100000001921000000000000000100000000
.................................TGATTTTCTT-ATTT--C-GCTCGCTACG..................................................................................................................................................................................................................................................................................................................................251523.40351000000001000000000000002000000000000001001400000113001000010000000000000000000000030001000000000100000000000000000020000000000000010100200000072324110503111430000000000000000000000000000000006140000100000002100000000080104101309216000000000000010000000010000000000000000000000000000000000000000000057360000001732000000000000000100000000
..........................................................................................................................................................................................................................................................................................TT--------------------------------C------GGCGAT-------CTCGCTGCT---------CCTGCGTC......................26122.00220000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000200010000000000000000000000000000000000010000000000000000000000000110000101050000000000000000000000000000000000000000000000000000000000000000001001000000020000000000000000001000000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CC..................................................................................................................................................................................................................................................242017.553510000000000000000000000000000010000000000005004500000000000000000000000000000000000002311000000000000000000000001030000000000000000000000000000000050464000000000000000000000000000000000000011400000000002000000000000004100007001520000000000000000000000000000000000000000000000000000000000000000010013000000000079000000000000001816160000000
...............................................................TTT-GCAGCGGCTAGCTCAG-AGAGTT......................................................................................................................................................................................................................................................................................................25116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000100300000000002400000000000100000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TGATTTTCTT-ATTT--C-GCTCGCTACGGT................................................................................................................................................................................................................................................................................................................................27115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000100000000000000000000000100000103250000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CCA.................................................................................................................................................................................................................................................252014.452890000003000000000000000010000000000000000000000000040000007000000000000000000000000020030000000000600000000010000000060000000000000000000000200230000000000000000000000000000000000000000000000100000000000000600000000000000000002080000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000003000000000
.....................................................................................................................................................................................................................................................................................................................................................TGCT---------CCTGCGTCGCTTTTC--CTGCAA.......25114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000011000000000000000000000000000000000000000000000000000000207000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................TT-ATTT--C-GCTCGCTACGGTTT-GCA..........................................................................................................................................................................................................................................................................................................................24114.00140000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000020800100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................TT-GCAGCGGCTAGCTCAG-AGAGTTTT....................................................................................................................................................................................................................................................................................................262013.202640000000000000000000000000000000000005040900060205000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152621275128071272000000000000000000000000000000000121321000200000002052108070000012001021000000000000000000000010000000000000000000000000000000000000000000007300000001052000000000000000000000000
.................................TGATTTTCTT-ATTT--C-GCTCGCTACGG.................................................................................................................................................................................................................................................................................................................................261513.001950000000000000000000000010000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100304080000100200000010000200000000000000000000000000000000020000000000000000000000000100030801859760000000000000000000000000000000000000000000000000000000000000000000110000000011000000000000000000000000
...................................................................................................................................................................................................................................................TATAT------------AATT-------------AA---TT--------------------------------C------GGCGAT-------CTCGC...........................................25111.00110000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000001000000000001000000000000010200210000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--C...................................................................................................................................................................................................................................................232010.552110000000000000000000001100000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000100000000000001000120000300000000000000000000000000000000000000001000000100008000000000000002830590010000000000000000000000000000000000000000000000000000000000000000000300000004100000000000000000000000000
................................................................TT-GCAGCGGCTAGCTCAG-AGAGTTT.....................................................................................................................................................................................................................................................................................................252010.3520700000000000000000000001000000000000000000000101000004000000000000000000000000000000010000000000000000000000000000000000000000001000000010000003634104200722000000000000000000000000000000000306001701015000002733111000001001001011000000000000000000000000000000000000000000000000000000000000000000001002300000035165000000000000000000000000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CCAAGG..............................................................................................................................................................................................................................................28209.6519300000000000000000000002000000000000000000000103030000600000000000000000000000000000000000000000000000000000000000000000000000000001204000000500000000000100100000000000000100000000000000000000101000000000000000000000000053100430401000000000000000000001000000000000000000000000000000000000000000000103000000300000000000000000222000000
................................................................TT-GCAGCGGCTAGCTCAG-AGAGTT......................................................................................................................................................................................................................................................................................................24209.5019000000000000000000000001000000000000000000000100000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000012008030100011000000000000000000000000000000000322200003026000000001601602200010300000221000000000000000000000000000000000000000000001000000000000000000000180100000002092000000000000000000000000
...........................................................................................................................................................................................................................................................................................T--------------------------------C------GGCGAT-------CTCGCTGCT---------CCTGCGTCGC....................2719.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000100000000000000001001000000
...............................................................TTT-GCAGCGGCTAGCTCAG-AGAGTTTGT...................................................................................................................................................................................................................................................................................................2819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................T--------------------------------C------GGCGAT-------CTCGCTGCT---------CCTGCGTC......................2519.0090000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010100110000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000
..........................................................................................................................................................................................................................................................................................TT--------------------------------C------GGCGAT-------CTCGCTGCT---------CCTGCGT.......................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000001102000000000000000000000000000000000
.....................................................................................................................................................................TGG------------GTTCTT----ATGATAGCCG--TTTAT-------------------..............................................................................................................................................................2417.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000004000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................................................................................................................................................................................................................................................................................................................................................TCGCTGCT---------CCTGCGTCGCTTTTC--C............2417.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000100030000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.....................................................................................................................................................................................................................................................................ATT-------------AA---TT--------------------------------C------GGCGAT-------CTCGCTGCT---------CCT...........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................T---------CCTGCGTCGCTTTTC--CTGCAAC-GCC..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................................TT--C-GCTCGCTACGGTTT-GCAG.........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TT----ATGATAGCCG--TTTAT-------------------T--CTAC---TGT.................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TGG------------GTTCTT----ATGATAGCCG--......................................................................................................................................................................................1911.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................GAA--A-AGCA-A-------TGG------------GTTCTT----ATGATAG...........................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................CTACGGTTT-GCAGCGGCTAGCT................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................CTCGCTACGGTTT-GCAGCGGCTAG..................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................CTGCT---------CCTGCGTCGCTTTTC--CTGCAA.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TT----ATGATAGCCG--TTTAT-------------------T--CTA........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................GCA-A-------TGG------------GTTCTT----ATGATAGCCG--TTTA..................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TATATAT------------AATT-------------AA---TT--------------------------------C------GGCGAT-------CTCGCT..........................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TT-ATTT--C-GCTCGCTACGGTA...............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................AA---TT--------------------------------C------GGCGAT-------CTCGCTGCT---------CCTGCGT.......................2711.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................CA-A-------TGG------------GTTCTT----ATGATAGCCG--TT....................................................................................................................................................................................2411.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
T------------------GTGTTGTAACGAACTGATTTTCTT-AT..................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................GAA--A-AGCA-A-------TGG------------GTTCTT----ATGATAGCCG--T.....................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................GGCGAT-------CTCGCTGCT---------CCTGCGTC......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................T--------------------------------C------GGCGAT-------CTCGCTGCT---------CCTGCGTCGCT...................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TATATAT------------AATT-------------AA---TT--------------------------------C------GGCGAT-------CTCGC...........................................2711.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................CTACGGTTT-GCAGCGGCTAGCTC...............................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................TGTATATAT------------AATT-------------AA---TT--------------------------------C------GGCGAT-------................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......................................................................................................................................................................................................................................TAC---TGTTGTATATAT------------AATT-------------AA---TT--------------------------------C------GGCATC-------................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................C------GGCGAT-------CTCGCTGCT---------CCTGCGTC......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................TTCTT-ATTT--C-GCTCGCTACGGT................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................TGATTTTCTT-ATTT--C-GCTCGCTACGGTA...............................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................TGTATATAT------------AATT-------------AA---TT--------------------------------C------GGCGAT-------CTC.............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................TGCT---------CCTGCGTCGCTTTTC--CTGCAAC-GC...2811.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AA--A-AGCA-A-------TGG------------GTTCTT----ATGATAGCC.........................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................TGCT---------CCTGCGTCGCTTTTC--CTGC.........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................T-ATTT--C-GCTCGCTACGGTTT-GCAGCGGCATC..................................................................................................................................................................................................................................................................................................................3111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TG----------------TAGTTTGTAA-GAACTGTTTTAT------T--C-ACTTTCTACGAGTT-GCAATGGCTAGCTCAA-AAAGTTTGTTTGTTCGTTTCACCAAATTTATGT-TT-TGAGTGATTGTCCA--A------G-A-AGAAGACT----------GG------------GTTTCAGATTTAC---GTCGCTTTTAT-------------------T--A------------------------------AAGG-------------GAT---ACCC-T-----------------AAATGGACTCC------GGCGGT------CCTCGCTGTC-----TGC-TGTGCGGCGTCATTC--TCCCGAC-GTCTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
TATTATAT-------A--CGCGTTGTAACGAATGGATTTCTTGGTTTC--T-GCCCGCTACGGATT-GCAACGGCTAGCTCAG-AGAGTTTATTTGTTCGTGCCACCAAATTTATGA-TT-TGTGTGATTGCCCG--A--CCAAAAAA--A-AAAA-AGATTT-------AA---ATAGATTGATAGATTTAAACTA---CCTTTAT-------------------G-----CAGTGACG------------------CTTGACA------------------------------------------AA-------T------AGAATC-------TTCGCTGGT---------CCCGCGACGCTCTTC--TCATCAC-CTTTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................TTCTTGGTTTC--T-GCCCGCTACGGAT...............................................................................................................................................................................................................................................................................................................................25260.501210500000000116
...........................................................................TAGCTCAG-AGAGTTTATTTGTTCGTGC.........................................................................................................................................................................................................................................................................................27237.0074014100000068
.............................................TTC--T-GCCCGCTACGGATT-GCAACGGC.....................................................................................................................................................................................................................................................................................................................26226.00520311000000020
..............................................TC--T-GCCCGCTACGGATT-GCAACGGC.....................................................................................................................................................................................................................................................................................................................25224.00480281000200017
..........................................................TACGGATT-GCAACGGCTAGCTCAG-AGA.........................................................................................................................................................................................................................................................................................................271116.271790200000000177
..........................................................TACGGATT-GCAACGGCTAGCTCAG-AGAG........................................................................................................................................................................................................................................................................................................281111.361250100002000122
............................................................................................................................................................................................................................................................................................................................T------AGAATC-------TTCGCTGGT---------CCCGCGACGCTC..................28210.0020030000000017
..................................................T-GCCCGCTACGGATT-GCAACGGCTAGC.................................................................................................................................................................................................................................................................................................................2729.5019017200000000
............................................TTTC--T-GCCCGCTACGGATT-GCAACGGC.....................................................................................................................................................................................................................................................................................................................2728.0016012300010000
.....................................TTCTTGGTTTC--T-GCCCGCTACGGATT-.............................................................................................................................................................................................................................................................................................................................2628.0016010000000015
.......T-------A--CGCGTTGTAACGAATGGATTTCTTGGTT..................................................................................................................................................................................................................................................................................................................................................3027.0014000000000014
................................................................................................................................................................................................................................................................................................................................................TTCGCTGGT---------CCCGCGACGCTCTTC--TC...........2627.0014010000000013
.........................TAACGAATGGATTTCTTGGTTTC--T-GCC.........................................................................................................................................................................................................................................................................................................................................2726.501305800000000
....................................................................................................................................................................................................................................................................TGACA------------------------------------------AA-------T------AGAATC-------TTCGCTGGT---------CC............................2526.501309400000000
............................................................................................TTTGTTCGTGCCACCAAATTTATGA-TT-.......................................................................................................................................................................................................................................................................2726.001202200010007
....................................................GCCCGCTACGGATT-GCAACGGCTAGCTCA..............................................................................................................................................................................................................................................................................................................2925.5011000000000011
.......................................................................................................................................................................................................................................................................................................................................TC-------TTCGCTGGT---------CCCGCGACGCTCTTC--T............2725.0010010000000000
.....................................TTCTTGGTTTC--T-GCCCGCTACGGA................................................................................................................................................................................................................................................................................................................................2424.50901000000008
..........................................................TACGGATT-GCAACGGCTAGCTCAG-A...........................................................................................................................................................................................................................................................................................................25124.1750010000000049
.......................................................................................................................................................................................................................................................................................................................................TC-------TTCGCTGGT---------CCCGCGACGCTCTTC--.............2624.00807100000000
..................................................T-GCCCGCTACGGATT-GCAACGGC.....................................................................................................................................................................................................................................................................................................................2324.00808000000000
...................................................................................................................................................................................................TA---CCTTTAT-------------------G-----CAGTGACG------------------CTTGACA------------------------------------------.............................................................................2523.50707000000000
...TATAT-------A--CGCGTTGTAACGAATGGAT...........................................................................................................................................................................................................................................................................................................................................................2523.50703000000004
...........................................................................................................................................................................................................TTAT-------------------G-----CAGTGACG------------------CTTGACA------------------------------------------AA-------T------AGA..........................................................2623.00603000000003
.......T-------A--CGCGTTGTAACGAATGGATTTCTTGGT...................................................................................................................................................................................................................................................................................................................................................2923.00600000000006
..............................................................................................................................................................................................TAAACTA---CCTTTAT-------------------G-----CAGTGACG------------------CT............................................................................................................................2523.00606000000000
...........................................................ACGGATT-GCAACGGCTAGCTCAG-AGA.........................................................................................................................................................................................................................................................................................................26112.9132000000000032
.......................................................................................................................................................................................................................................................................................................................................TC-------TTCGCTGGT---------CCCGCGACGCTCT.................2432.67808000000000
.............................GAATGGATTTCTTGGTT..................................................................................................................................................................................................................................................................................................................................................1722.50500000000005
................................TGGATTTCTTGGTTTC--T-GCCCGCTACGGAT...............................................................................................................................................................................................................................................................................................................................3022.50500000000005
............................................................................................................................................................................................................................................................................................................................T------AGAATC-------TTCGCTGGT---------CCCGCGACGC....................2622.50504100000000
................................................................................................................................................................................................................................................................................................................................................TTCGCTGGT---------CCCGCGACGCTCTTC--TCA..........2722.50505000000000
........................................................................................................................................................................................................................................................................................................................................................T---------CCCGCGACGCTCTTC--TCATCAC-CT...2522.50505000000000
................................................................................................................................................................................................................................................................................................................................................TTCGCTGGT---------CCCGCGACGCTCTTC--T............2522.00402100010000
.........................................TGGTTTC--T-GCCCGCTACGGATT-GCA..........................................................................................................................................................................................................................................................................................................................2522.00404000000000
TATTATAT-------A--CGCGTTGTAACGAATGGA............................................................................................................................................................................................................................................................................................................................................................2722.00400000000004
.........................TAACGAATGGATTTCTTGGTTTC--T-GC..........................................................................................................................................................................................................................................................................................................................................2622.00401300000000
..............................................................................................TGTTCGTGCCACCAAATTTATGA-TT-.......................................................................................................................................................................................................................................................................2522.00403100000000
.........................................TGGTTTC--T-GCCCGCTACGGATT-GCAACGG......................................................................................................................................................................................................................................................................................................................2922.00400000000004
........................................................................................................................................................................................................................................................................................................................................................T---------CCCGCGACGCTCTTC--TCATCAC-C....2422.00403100000000
.................................................................T-GCAACGGCTAGCTCAG-AGAGTTTATT..................................................................................................................................................................................................................................................................................................2741.75702000000005
..........................................................................................................CAAATTTATGA-TT-TGTGTGATTGCCC..........................................................................................................................................................................................................................................................26201.7034003400000000
.......T-------A--CGCGTTGTAACGAATGGATTTCTTGG....................................................................................................................................................................................................................................................................................................................................................2821.50303000000000
..................................................T-GCCCGCTACGGATT-GCAACGGCTAG..................................................................................................................................................................................................................................................................................................................2621.50303000000000
..............................................TC--T-GCCCGCTACGGATT-GCAACGGCT....................................................................................................................................................................................................................................................................................................................2621.50303000000000
......................................TCTTGGTTTC--T-GCCCGCTACGGATT-GC...........................................................................................................................................................................................................................................................................................................................2721.50301200000000
.....TAT-------A--CGCGTTGTAACGAATGGATTTCT.......................................................................................................................................................................................................................................................................................................................................................2721.50303000000000
........................................................................................................................................................................................................................................................................................................................................................T---------CCCGCGACGCTCTTC--TCATCAC-CTT..2621.50303000000000
.........................................................CTACGGATT-GCAACGGCTAGCTCAG-A...........................................................................................................................................................................................................................................................................................................26121.5018000000000018
....................................................................................................................................................................................................................................................................TGACA------------------------------------------AA-------T------AGAATC-------TTCGCTGGT---------CCCG..........................2721.50302100000000
.........................................TGGTTTC--T-GCCCGCTACGGATT-GCAAC........................................................................................................................................................................................................................................................................................................................2721.50303000000000
...................................................................................................................................................................................................TA---CCTTTAT-------------------G-----CAGTGACG------------------CTTGACA------------------------------------------AA-------....................................................................2721.50303000000000
......................................TCTTGGTTTC--T-GCCCGCTACGGAT...............................................................................................................................................................................................................................................................................................................................2421.50303000000000
..........................................................TACGGATT-GCAACGGCTAGCTCAG-AG..........................................................................................................................................................................................................................................................................................................26111.4516010000000015
..................................................................................................................TGA-TT-TGTGTGATTGCCCG--A--CCA.................................................................................................................................................................................................................................................23201.2024024000000000
.............................................TTC--T-GCCCGCTACGGATT-GCAACGGCT....................................................................................................................................................................................................................................................................................................................2721.00202000000000
..................................................................................................................................................................................................................................................................................................................................................................CCCGCGACGCTCTTC--TCATCAC-CTT..2521.00202000000000
............................................................................AGCTCAG-AGAGTTTATTTGTTCGTGC.........................................................................................................................................................................................................................................................................................2621.00201010000000
...........................................................................................................................................................................................................TTAT-------------------G-----CAGTGACG------------------CTTGACA------------------------------------------AA-------T------AG...........................................................2521.00200020000000
.....................................................CCCGCTACGGATT-GCAACGGCTAGCTCA..............................................................................................................................................................................................................................................................................................................2821.00202000000000
.....................................................CCCGCTACGGATT-GCAACGGCTAGCTC...............................................................................................................................................................................................................................................................................................................2721.00202000000000
.......T-------A--CGCGTTGTAACGAATGGATTTCTT......................................................................................................................................................................................................................................................................................................................................................2621.00201000000001
............................................TTTC--T-GCCCGCTACGGATT-GCAACG.......................................................................................................................................................................................................................................................................................................................2521.00202000000000
.....................................................................................................................................................................................................................................................................................................................................................TGGT---------CCCGCGACGCTCTTC--TCATCAC-CT...2821.00202000000000
...................................................................................................................................................................................................................................................................TTGACA------------------------------------------AA-------T------AGAATC-------TTCGCTGGT---------CC............................2621.00200200000000
.........................................TGGTTTC--T-GCCCGCTACGGATT-G............................................................................................................................................................................................................................................................................................................................2321.00202000000000
.......T-------A--CGCGTTGTAACGAATGGATTTCT.......................................................................................................................................................................................................................................................................................................................................................2521.00202000000000
...................................................................................................................................................................................................................................................................................................................................AGAATC-------TTCGCTGGT---------CCCGCGACGCTC..................2721.00202000000000
............................................................................................TTTGTTCGTGCCACCAAATTTATGA-T.........................................................................................................................................................................................................................................................................2621.00201000000001
..................................................T-GCCCGCTACGGATT-GCAACGGCT....................................................................................................................................................................................................................................................................................................................2421.00202000000000
..............................................TC--T-GCCCGCTACGGATT-GCAACGG......................................................................................................................................................................................................................................................................................................................2421.00202000000000
.......T-------A--CGCGTTGTAACGAATGGATTTCTTG.....................................................................................................................................................................................................................................................................................................................................................2721.00202000000000
...........................................................................................................................................................................................................................................TGACG------------------CTTGACA------------------------------------------AA-------T------AGAATC-------TTCGC...........................................2621.00202000000000
................................TGGATTTCTTGGTTTC--T-GCCCGCTACG..................................................................................................................................................................................................................................................................................................................................2721.00202000000000
...............................................C--T-GCCCGCTACGGATT-GCAACGGC.....................................................................................................................................................................................................................................................................................................................2421.00202000000000
.........................................TGGTTTC--T-GCCCGCTACGGATT-GC...........................................................................................................................................................................................................................................................................................................................2421.00201100000000
....................................TTTCTTGGTTTC--T-GCCCGCTACGGAT...............................................................................................................................................................................................................................................................................................................................2621.00200000000002
......................................................................................................................................................................................................................................................................................................................................................GGT---------CCCGCGACGCTCTTC--TCATCAC-C....2621.00202000000000
.............................................................................................................................TGATTGCCCG--A--CCAAAAAA--A-AAAA-AGA................................................................................................................................................................................................................................2711.00100100000000
...........................................................................................................................TGTGATTGCCCG--A--CCAAAAAA--A-AAAA-G..................................................................................................................................................................................................................................2711.00101000000000
............................................................CGGATT-GCAACGGCTAGCTCAG-AGAG........................................................................................................................................................................................................................................................................................................26110.73800000000008
........................................................................................................ACCAAATTTATGA-TT-TGTGTGATTGCCC..........................................................................................................................................................................................................................................................28200.7014011300000000
..........................................................TACGGATT-GCAACGGCTAGCTCAG-AGAGTT......................................................................................................................................................................................................................................................................................................3090.67600000000006
................................................................................................................................................................................................................................................................................................................................................TTCGCTGGT---------CCCGCGAC......................1730.67200000000002
.......................................................................................................................................................................................................................................................................................................................................TC-------TTCGCTGGT---------CCCGCGACGCTCTT................2530.67202000000000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CC..................................................................................................................................................................................................................................................24200.5511011000000000
..............................................................................................................................................................................................................T-------------------G-----CAGTGACG------------------CTTGACA------------------------------------------AA-------T------AGAATC-------T...............................................2720.50101000000000
..................................................................................G-AGAGTTTATTTGTTCGTGCCACC.....................................................................................................................................................................................................................................................................................2420.50100100000000
..........................................................................................TATTTGTTCGTGCCACCAAATTTATGA-TT-.......................................................................................................................................................................................................................................................................2920.50101000000000
..............................................................................................................................................................................................................T-------------------G-----CAGTGACG------------------CTTGACA------------------------------------------AA-------T------AGAATC-------................................................2620.50101000000000
..................................GATTTCTTGGTTTC--T-GCCCGCTACGG.................................................................................................................................................................................................................................................................................................................................2620.50101000000000
......................................................................................................................................................................................................................................................................................................................................................GGT---------CCCGCGACGCTCTTC--TCATCAC-CT...2720.50101000000000
................................................................................CAG-AGAGTTTATTTGTTCGTGCCACC.....................................................................................................................................................................................................................................................................................2620.50100000010000
..............................................TC--T-GCCCGCTACGGATT-GCAACGGCC....................................................................................................................................................................................................................................................................................................................2620.50101000000000
...................................................................................................................................................................................................................................................................................................................AA-------T------AGAATC-------TTCGCTGGT---------CCCGCGAC......................2620.50101000000000
...................................................................................................................................................................................................................................................................................................................................AGAATC-------TTCGCTGGT---------CCCGCGACGC....................2520.50101000000000
...........................................................................TAGCTCAG-AGAGTTTATTTGTTCGTGCC........................................................................................................................................................................................................................................................................................2820.50101000000000
........................................................................................TTTATTTGTTCGTGCCACCAAATT................................................................................................................................................................................................................................................................................2420.50101000000000
............................................................................................................................................................................................................TAT-------------------G-----CAGTGACG------------------CTTGACA------------------------------------------AA-------T------AGAA.........................................................2620.50101000000000
..........................AACGAATGGATTTCTTGGTTTC--T-GC..........................................................................................................................................................................................................................................................................................................................................2520.50101000000000
...............................................................................................................................................................................................AAACTA---CCTTTAT-------------------G-----CAGTGACG------------------CTTGA.........................................................................................................................2720.50101000000000
....................................................................................................................................................................................................A---CCTTTAT-------------------G-----CAGTGACG------------------CTTGACA------------------------------------------.............................................................................2420.50101000000000
...........................................................................................................................................................................A---ATAGATTGATAGATTTAAACTA---CCT.....................................................................................................................................................................................2620.50101000000000
....................................................................................................................................................................................................................................................................TGACA------------------------------------------AA-------T------AGAATC-------TTCGCTGGT---------CCC...........................2620.50101000000000
..........................................GGTTTC--T-GCCCGCTACGGATT-GCA..........................................................................................................................................................................................................................................................................................................................2420.50101000000000
.............................................TTC--T-GCCCGCTACGGATT-GCAACGG......................................................................................................................................................................................................................................................................................................................2520.50101000000000
....................................................GCCCGCTACGGATT-GCAACGGCTAGCTC...............................................................................................................................................................................................................................................................................................................2820.50101000000000
..................................................................................................................................................................................................................................G-----CAGTGACG------------------CTTGACA------------------------------------------AA-------T------AGA..........................................................2220.50101000000000
..........................AACGAATGGATTTCTTGGTTTC--T-GCC.........................................................................................................................................................................................................................................................................................................................................2620.50100100000000
.....................................................................................................................................................................................................................................................................................................................................................TGGT---------CCCGCGACGCTCTTC--TCATC........2420.50100100000000
.....................................TTCTTGGTTTC--T-GCCCGCTACGGATT-GCAAC........................................................................................................................................................................................................................................................................................................................3120.50100000000001
............................................................................................................................................................................................................................................GACG------------------CTTGACA------------------------------------------AA-------T------AGAATC-------TTCGCTGG........................................2820.50101000000000
.........................TAACGAATGGATTTCTTGGTTTC--T-GCCC........................................................................................................................................................................................................................................................................................................................................2820.50100100000000
.................................................................................................................................................................................................ACTA---CCTTTAT-------------------G-----CAGTGACG------------------CT............................................................................................................................2220.50101000000000
......................................TCTTGGTTTC--T-GCCCGCTACGGATT-.............................................................................................................................................................................................................................................................................................................................2520.50101000000000
..........................................................................................................................................................................................................................................GTGACG------------------CTTGACA------------------------------------------AA-------T------AGA..........................................................1920.50101000000000
..............................................TC--T-GCCCGCTACGGATT-GCAACG.......................................................................................................................................................................................................................................................................................................................2320.50100100000000
.......T-------A--CGCGTTGTAACGAATGGATTTCTTGGTA..................................................................................................................................................................................................................................................................................................................................................3020.50100000000001
.........................................................................................................................................................................................................CTTTAT-------------------G-----CAGTGACG------------------CTTGACA------------------------------------------A............................................................................2320.50101000000000
......................................TCTTGGTTTC--T-GCCCGCTACGGATT-GCA..........................................................................................................................................................................................................................................................................................................................2820.50101000000000
...............................................................................TCAG-AGAGTTTATTTGTTCGTGCCAC......................................................................................................................................................................................................................................................................................2620.50101000000000
..................................................T-GCCCGCTACGGATT-GCAACGGCTAGCC................................................................................................................................................................................................................................................................................................................2820.50100100000000
.................................GGATTTCTTGGTTTC--T-GCCCGCTACG..................................................................................................................................................................................................................................................................................................................................2620.50101000000000
............................................TTTC--T-GCCCGCTACGGATT-GCAACGGCT....................................................................................................................................................................................................................................................................................................................2820.50101000000000
........................................TTGGTTTC--T-GCCCGCTACGGATT-GCA..........................................................................................................................................................................................................................................................................................................................2620.50101000000000
.................................................................................................TCGTGCCACCAAATTTATGA-TT-TGTG...................................................................................................................................................................................................................................................................2620.50101000000000
...................................................................................................................................................................................................TA---CCTTTAT-------------------G-----CAGTGACG------------------CTTGACA------------------------------------------A............................................................................2620.50101000000000
..............................................................................................TGTTCGTGCCACCAAATTTATGA-TC-.......................................................................................................................................................................................................................................................................2520.50100100000000
................................TGGATTTCTTGGTTTC--T-GCCCGCTACGG.................................................................................................................................................................................................................................................................................................................................2820.50101000000000
.....TAT-------A--CGCGTTGTAACGAATGGATTTC........................................................................................................................................................................................................................................................................................................................................................2620.50101000000000
.....................................................................................................................................................................................................................................................................GACA------------------------------------------AA-------T------AGAATC-------TTCGCTGGT---------CCCGC.........................2720.50101000000000
TATTATAT-------A--CGCGTTGTAACGAATGGAT...........................................................................................................................................................................................................................................................................................................................................................2820.50101000000000
........................................................................................................................................................................................TAGATTTAAACTA---CCTTTAT-------------------G-----CAGT....................................................................................................................................................2520.50101000000000
..............................................................................................TGTTCGTGCCACCAAATTTATGA-TT-TG.....................................................................................................................................................................................................................................................................2720.50101000000000
.............................................................................................................................................................................................TTAAACTA---CCTTTAT-------------------G-----CAGTGACG------------------CT............................................................................................................................2620.50101000000000
.......................TGTAACGAATGGATTTCTTGGTTTC--..............................................................................................................................................................................................................................................................................................................................................2520.50101000000000
...........................................................................................ATTTGTTCGTGCCACCAAATTTATGA-..........................................................................................................................................................................................................................................................................2620.50101000000000
...................................................................................................................................................................................................................................................................................................................AA-------T------AGAATC-------TTCGCTGGT---------CCCGCGACGC....................2820.50100100000000
......................................TCTTGGTTTC--T-GCCCGCTACGGA................................................................................................................................................................................................................................................................................................................................2320.50101000000000
.....................................................................................................................................................................................TGATAGATTTAAACTA---CCTTTAT-------------------G-----CAG.....................................................................................................................................................2720.50101000000000
...................................................................................................................................................................................................TA---CCTTTAT-------------------G-----CAGTGACG------------------CTTGAC........................................................................................................................2420.50101000000000
....................................................GCCCGCTACGGATT-GCAACGGCTAGC.................................................................................................................................................................................................................................................................................................................2620.50101000000000
.................................................................................................................................................................................................................................................................................................................................................TCGCTGGT---------CCCGCGACGCTCTTC--TC...........2520.50101000000000
..........................AACGAATGGATTTCTTGGTTTC--T-GCCC........................................................................................................................................................................................................................................................................................................................................2720.50100100000000
................................................................................................TTCGTGCCACCAAATTTATGA-TT-TGTG...................................................................................................................................................................................................................................................................2720.50101000000000
..............................................TC--T-GCCCGCTACGGATT-GCAACGGCTAGC.................................................................................................................................................................................................................................................................................................................2920.50100100000000
........................................TTGGTTTC--T-GCCCGCTACGGATT-GC...........................................................................................................................................................................................................................................................................................................................2520.50101000000000
...................................................................................................................................................................................................TA---CCTTTAT-------------------G-----CAGTGACG------------------CTTGA.........................................................................................................................2320.50101000000000
..............................................TC--T-GCCCGCTACGGATT-GCAACGGA.....................................................................................................................................................................................................................................................................................................................2520.50100100000000
............................................................................AGCTCAG-AGAGTTTATTTGTTCGTGCC........................................................................................................................................................................................................................................................................................2720.50100100000000
...TATAT-------A--CGCGTTGTAACGAATGGATT..........................................................................................................................................................................................................................................................................................................................................................2620.50100000000001
.............................................................................................TTGTTCGTGCCACCAAATTTATGA-TT-.......................................................................................................................................................................................................................................................................2620.50101000000000
...........................................................................................................................................................................................................................................TGACG------------------CTTGACA------------------------------------------AA-------T------AGAATC-------TTCGCC..........................................2720.50100100000000
.............................................TTC--T-GCCCGCTACGGATT-GCAAC........................................................................................................................................................................................................................................................................................................................2320.50101000000000
........................................TTGGTTTC--T-GCCCGCTACGGAT...............................................................................................................................................................................................................................................................................................................................2220.50101000000000
.............................................TTC--T-GCCCGCTACGGATT-GCA..........................................................................................................................................................................................................................................................................................................................2120.50101000000000
......................................................................................................................................................................................................................................................................................................................................ATC-------TTCGCTGGT---------CCCGCGACGCTCT.................2520.50101000000000
...............................................................................................GTTCGTGCCACCAAATTTATGA-TT-TG.....................................................................................................................................................................................................................................................................2620.50101000000000
..............................................................................................................................................................................................................................................CG------------------CTTGACA------------------------------------------AA-------T------AGAATC-------TTCGCTGG........................................2620.50101000000000
................................................................................................TTCGTGCCACCAAATTTATGA-TT-TGT....................................................................................................................................................................................................................................................................2620.50101000000000
.............................................................................................................................................................................................TTAAACTA---CCTTTAT-------------------G-----CAGTGACG------------------C.............................................................................................................................2520.50101000000000
............................................................................................................................................................................................................................................................................................................................T------AGAATC-------TTCGCTGGT---------CCCGCGACGCT...................2720.50100100000000
.............................................................................................TTGTTCGTGCCACCAAATTTATGA-T.........................................................................................................................................................................................................................................................................2520.50101000000000
.....................................TTCTTGGTTTC--T-GCCCGCTACGGAG...............................................................................................................................................................................................................................................................................................................................2520.50100000000001
..............................................................................................................................................................................................................T-------------------G-----CAGTGACG------------------CTTGACA------------------------------------------AA-------T------AGAATC-------TT..............................................2820.50101000000000
...TATAT-------A--CGCGTTGTAACGA.................................................................................................................................................................................................................................................................................................................................................................1920.50100000000001
............................................................................................................................................................................................................TAT-------------------G-----CAGTGACG------------------CTTGACA------------------------------------------AA-------T------AGA..........................................................2520.50101000000000
...................................................................................................................................................................................................................................................................................................................................AGAATC-------TTCGCTGGT---------CCCGCGACG.....................2420.50101000000000
................................................................................................................................................................................TAGATTGATAGATTTAAACTA---CCTT....................................................................................................................................................................................2520.50100100000000
...........................................................................................................................................................................................................TTAT-------------------G-----CAGTGACG------------------CTTGACA------------------------------------------AA-------T------AGAA.........................................................2720.50101000000000
..................................................T-GCCCGCTACGGATT-GCAACGGCTAGCT................................................................................................................................................................................................................................................................................................................2820.50101000000000
............................................................CGGATT-GCAACGGCTAGCTCAG-AGA.........................................................................................................................................................................................................................................................................................................25110.45500000000005
.................................................................T-GCAACGGCTAGCTCAG-AGAGTT......................................................................................................................................................................................................................................................................................................23200.40807100000000
................................................................................................................................................................................................................................................................................................................................................TTCGCTGGT---------CCCGCGACGCTCTT................2330.33101000000000
........................................................................................................................................................................................................................................................................................................................................C-------TTCGCTGGT---------CCCGCGACGCTCT.................2330.33101000000000
.......................................................................................................................................................................................................................................................................................................................................TC-------TTCGCTGGT---------CCCGCGACGCT...................2230.33101000000000
........................................................................................................................................................................................................................................................................................................................................C-------TTCGCTGGT---------CCCGCGACGCTC..................2230.33101000000000
....................................................................................................................A-TT-TGTGTGATTGCCCG--A--CCAAAAAA--A-........................................................................................................................................................................................................................................2730.33101000000000
..............................................................................................................TTTATGA-TT-TGTGTGATTGCCCG--A--CC..................................................................................................................................................................................................................................................26200.30600000000006
................................................................................................................TATGA-TT-TGTGTGATT..............................................................................................................................................................................................................................................................16200.30600000000006
.....................................TTCTTGGTTTC--T-GCCCGCTACGGAA...............................................................................................................................................................................................................................................................................................................................2540.25100000000001
............................................................................AGCTCAG-AGAGTTTATTTGTTCGT...........................................................................................................................................................................................................................................................................................2440.25101000000000
....................................................................CAACGGCTAGCTCAG-AGAGTTTATTTG................................................................................................................................................................................................................................................................................................2740.25101000000000
................................................................................................................TATGA-TT-TGTGTGATTGCCCG--A--CCAAA...............................................................................................................................................................................................................................................27200.25505000000000
.................................................................T-GCAACGGCTAGCTCAG-AGAGTTTAT...................................................................................................................................................................................................................................................................................................2640.25101000000000
..........................................................................CTAGCTCAG-AGAGTTTATTTGTTCG............................................................................................................................................................................................................................................................................................2540.25101000000000
...........................................................................................................AAATTTATGA-TT-TGTGTGATTGCCC..........................................................................................................................................................................................................................................................25200.20404000000000
............................................................................................................AATTTATGA-TT-TGTGTGATTGCCCG--A--CC..................................................................................................................................................................................................................................................28200.20400400000000
.........................................................CTACGGATT-GCAACGGCTAGCTCAG-AGA.........................................................................................................................................................................................................................................................................................................28110.18200000000002
.................................................................T-GCAACGGCTAGCTCAG-AGAGT.......................................................................................................................................................................................................................................................................................................22200.15302100000000
droBia1
ATCTTGATTGGGTGGG-GCGTACTGTAACGAACTGATTTCTTTGGTTT-CT-GCTCGCTACGGTATTTGTGCGGCTAGCTCAGTAGATTGTGTGTGTTCGTCCCACCAAATTTATA--TA-AGCGTGACCGCCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATATTTTTAGG----ACTCATGGTGTAACGAACTGATTATTTA-AGTC--T-GCTCGCTACGAGATTCGTGCGGCTAGCTCAG-TGTAGTTGTGTGTTTGTCCCACCAAATTTATA--TA-AACGTGACCGCCCAGTAGATCAGTGA--GAAAGCACAGAATTCACGG------------GTTCTT----AG--TGG--G--TTTAT-------------------T--GCG--------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
-----------------------TGTAACGACCTGATTTCTATGTATT-CTCGCTCGCTACGTTAA-CGGGCGGCTAGCTCAG-AGAGGTTATGGGTTCGTTCCACCAAATTTATT---T-TGGGTGATTGCCTT--TGACCAATGA-ATAACGCA-AGAGTT-------CT--GTTGG-GATC------GTAACGG---TCTTTAT-------------------T-----CGTC---TCCTTGTAC------------AAGC-------------CTCGCGGCTC-T-----------------TCAG-C-TGCTGCTGCTC--CTC-------GT-----------CCTCTGCGGCGTCGCTCCT------CGTC-GCTGTSizeHit CountTotal NormTotal
No Reads
droRho1
G----------------------TGTAACGACCTGATTCTTT--ATTTCGT-GCTCGCTACGTAAA-CGTGCGGCTAGCTCAG-AGAGGTTGTGAGTTCGTTCCACCAAATTTATAA----TGAGTGACTGCCCG--TGACCAAAGG-ATAACGCC-AGAAA--------GG--ATTAG-GTTGG--------------------------TGCAG----GTTCATTATT----TC---TCAAAATAT-------------AGC----CTTGTTGCTAGTG------------------------------C-TTTTTCTGCCC--GTT-------GTCGCT------------GCTGCGTCGCTCCTGGCCTGCTACTGCCTTSizeHit CountTotal NormTotal
No Reads
droFic1
AT-----------------ATATTGTAACGAACTGCTTTTCAC-TATT--T-GCTCGCTACGTAAAACGCGCGGCTAGCTCAGTTGAGTTTGTGTGTTCGTCCCACCAAATTTTTTG--T-TGCGAGAT--CCCG--A--CCAAG-A-AGTACACA--GAATT-------GG--GTTAG-ATT-------TA-------------GCAATAGGCAGCTTGGTTTATTGGT----TC---TCGTTATACAATTGATTCGATGTGA-------------AGTGCTTCTCTCTGGCGACGATATTGCCCTCGTGGACGCC------GGTGA-TGACTCCCACGTCGA-----CTCCTGCGGCGG--------------CAC-GCC-TSizeHit CountTotal NormTotal
No Reads
droAna3
G----------------------TGTAACGAACTGTTTTTGCTTACTT-TT-CGTCGCAATAAA-T-TCCGCGGCTAGCTCAC-AGAGTTTGGGGGATCGTTCCACCGAATTTATAGATTCAACGTGATTGCTCG--A--GCCCAGAAATAACACA----------GGGTGCTTCTTT---TTATT----GATATCC---CCTTTAT-------------------T-----TGTATATT------------------GTTTACAAAG---------GGTAAATCTC-A-----------------TCGG--------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................GATTCAACGTGATTGCTCG--A--GCCCAGA.............................................................................................................................................................................................................................................2711.001100000
...................................................................................................................AGATTCAACGTGATTGCTCG--A--GCCC................................................................................................................................................................................................................................................2511.001010000
.........................................................................................................................................................................TGCTTCTTT---TTATT----GATATCC---CCTTTA..................................................................................................................................................................................2711.001100000
.......................................................................................................................TCAACGTGATTGCTCG--A--GCCC................................................................................................................................................................................................................................................2111.001010000
..................................................................................................................................................AAATAACACA----------GGGTGCTTCTTT---TTAT.......................................................................................................................................................................................................2620.501010000
...................................................................TCCGCGGCTAGCTCAC-AGAGTTTGG...................................................................................................................................................................................................................................................................................................2530.331100000
...............................................................................TCAC-AGAGTTTGGGGGATCGTTCC........................................................................................................................................................................................................................................................................................24200.306330000
.............................................................AAA-T-TCCGCGGCTAGCTCAC-AGAGTT......................................................................................................................................................................................................................................................................................................2640.251100000
.........................TAACGAACTGTTTTTGCTT....................................................................................................................................................................................................................................................................................................................................................1960.171010000
................................................................................CAC-AGAGTTTGGGGGATCGTTCCACC.....................................................................................................................................................................................................................................................................................26200.153300000
.............................................................................................................................TGATTGCTCG--A--GCCCAGAAATAACACA----------G.........................................................................................................................................................................................................................2880.131100000
................................................................................................................................TTGCTCG--A--GCCCAGAAATAACACA----------GGG.......................................................................................................................................................................................................................2780.131100000
..................................................................................................................................GCTCG--A--GCCCAGAAATAACACA----------GGG.......................................................................................................................................................................................................................2580.131100000
..............................................................................................................................GATTGCTCG--A--GCCCAGAAATAACACA----------GG........................................................................................................................................................................................................................2880.131100000
.............................................................................................................................TGATTGCTCG--A--GCCCAGAAATAACACA----------..........................................................................................................................................................................................................................2790.111100000
...........................................................................................................................CGTGATTGCTCG--A--GCCCAGAAATAACA......................................................................................................................................................................................................................................27100.101100000
...............................................................................TCAC-AGAGTTTGGGGGATCGTTCCACC.....................................................................................................................................................................................................................................................................................27200.102200000
...............................................................................TCAC-AGAGTTTGGGGGATCGTTCCAC......................................................................................................................................................................................................................................................................................26200.102200000
.............................................................................................................................TGATTGCTCG--A--GCCCAGAAATAACAC.....................................................................................................................................................................................................................................26100.101100000
............................................................................................................................GTGATTGCTCG--A--GCCCAGAAATAACA......................................................................................................................................................................................................................................26100.101100000
...........................................................................................................................CGTGATTGCTCG--A--GCCCAGAAATAAC.......................................................................................................................................................................................................................................26110.091010000
.............................................................................................................................TGATTGCTCG--A--GCCCAGAAATAACACT----------..........................................................................................................................................................................................................................27130.081100000
.............................................................................................................................TGATTGCTCG--A--GCCCAGAAATAACAA.....................................................................................................................................................................................................................................26140.071100000
..................................................................................C-AGAGTTTGGGGGATCGTTCCACC.....................................................................................................................................................................................................................................................................................24200.051010000
.....................................................................CGCGGCTAGCTCAC-AGAGTTTGGGG.................................................................................................................................................................................................................................................................................................25200.051100000
..............................................................................CTCAC-AGAGTTTGGGGGATCGTTCCAC......................................................................................................................................................................................................................................................................................27200.051100000
........................................................................GGCTAGCTCAC-AGAGTTTGGGGG................................................................................................................................................................................................................................................................................................23200.051100000
....................................................................................AGAGTTTGGGGGATCGTTCCACCGA...................................................................................................................................................................................................................................................................................25200.051000100
...............................................................................TCAC-AGAGTTTGGGGGATCGTTCCA.......................................................................................................................................................................................................................................................................................25200.051100000
droBip1
AA----------------GATACTGTAACGAACTGTTTTCTTTGCTTC--C-GCTCGCCACAATAT-GCCGCGGCTAGTTCAC-AGAGTCTGCGGGTTAGTTCCACCGAATTTATAG-TTCGACGTGATTGCCCG--A--GCCCAGAAATAATACA-A-A-----TA---GC-----------------------------TTTTATTTTATGCAG----TCTCTTTATTTGC---TGCTCCTTCT------------GTTTAC-------------AATGATGGTT-T-----------------AACCGGGTTCC------CGAGAACGGGCCCCAC-----TCCGAAT----ATTCGTGACCCTTG--GTGCCTC-CTTTGSizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 07:35 PM