dsi_27766

CCCCCATCCCAGGAGGACCCACGGCGCGGACAGCCTTTCCTCCTCCAGAGGTGAGTACGGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCACGGCAAATGAGGCATCCGCATCGCATCGCCTCTCCAACTGCATCCTGCAATCGGATCGACTTTGTATATTACACGATTAACTTGTCAAACTAATTGTTGTTCTTAACTTGAATGTGGACCAAGCTGGCTAGCTGACTCTCTGTCCGTTTCTCCT ***************************************************.(((.((((..(((.((.((.((((.(((..((.((((((.........))))))....))..)))..)))))).))...))).)))))))..........................******************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M025 embryo	M024 male body	M053 female body	SRR618934 dsim w501 ovaries
................................................................................................................................................AATCGGATCGACTTTGTATATTACAC................................................................................	26	0	1	2.00	2	0	2	0	0
...............................................................................................................................................................................................................................CTAGCTGACTCTCTGTCCGTTTCTCCT	27	0	1	2.00	2	2	0	0	0
.....................................................AGTACGGATCCCAGCGACAG.................................................................................................................................................................................	20	0	1	1.00	1	1	0	0	0
.............................................................................................................ATCCGCATCGCATCGCCTCTCCAACTG..................................................................................................................	27	0	1	1.00	1	1	0	0	0
...........................................................................................................................................................................................................................CTGGCTAGCTGACTCTCTGTC..........	21	0	1	1.00	1	1	0	0	0
.................................................................................................................................................ATCGGATCGACTTTGTATATTACACGAT.............................................................................	28	0	1	1.00	1	0	0	1	0
................ACCCACGGCGGGGACTGGCT......................................................................................................................................................................................................................	20	3	6	0.17	1	0	0	0	1

GGGGGTAGGGTCCTCCTGGGTGCCGCGCCTGTCGGAAAGGAGGAGGTCTCCACTCATGCCTAGGGTCGCTGTCGCGCTGGCTGTGCGGGAGTAGGTGCCGTTTACTCCGTAGGCGTAGCGTAGCGGAGAGGTTGACGTAGGACGTTAGCCTAGCTGAAACATATAATGTGCTAATTGAACAGTTTGATTAACAACAAGAATTGAACTTACACCTGGTTCGACCGATCGACTGAGAGACAGGCAAAGAGGA ******************************************************************************.(((.((((..(((.((.((.((((.(((..((.((((((.........))))))....))..)))..)))))).))...))).)))))))..........................***************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M023 head	O001 Testis	SRR618934 dsim w501 ovaries	SRR553485 Chicharo_3 day-old ovaries	SRR553486 Makindu_3 day-old ovaries
................................................................................................................................................................................................AACAAGAATTGAAGTTGCTCC.....................................	21	3	2	2.50	5	5	0	0	0	0
....................................................................................................................................................................................................AGAATTGAACTTACACCT....................................	18	0	1	1.00	1	0	1	0	0	0
......................................................................................GGGAGTTGGTACCGTTTA..................................................................................................................................................	18	2	4	0.25	1	0	0	1	0	0
............................................................................................................................GAAGAGGTTGAAGAAGGACGTT........................................................................................................	22	3	5	0.20	1	0	0	1	0	0
............................................................................................................................................................................AATTGAGCAGTTTGA...............................................................	15	1	15	0.07	1	0	0	1	0	0
..................................................................................................................................................................................................CAAGAATTGAAGTTGCTCC.....................................	19	3	19	0.05	1	1	0	0	0	0
..........................................................................CGCTGGCGGCGCGGGA................................................................................................................................................................	16	2	20	0.05	1	0	0	0	0	1
..................................................................................................................................................................................ACAGTTTGATTTACA.........................................................	15	1	20	0.05	1	0	0	0	1	0

Species	Coordinate	ID	Alignment
droSim2	2r:6391883-6392132 -	dsi_27766	CCCCCATCCCAGGAGGACCCACGGCGCGGACAGCCTTTCCTCCTCCAGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCACGGCAAATGAGG-CATCCGCATCGCATC----------------------------------------------------------------GCCTCTCCAACTGCATCCTGCAATCGGATCGACTTTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAAGCTGGCTAGCTG-------------------------AC-------------------------TCT---------CTGTCCG--------TTTCT-------------CC-T
droSec2	scaffold_1:3223546-3223795 -		CCCCCATCCCAGGAGGACCCACGGCGCGGATAGCCTTTCCTCCTCCAGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCACGGCAAATGAGG-CATCCGCATCGCATC----------------------------------------------------------------GCCTCTCCAACTGCATCCTGCAATCGGATCGACTTTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAAGCTGGCTAGTTG-------------------------AC-------------------------TCT---------CTGTCCG--------TTTCT-------------CC-T
dm3	chr2R:5606358-5606607 -		CCCCCATCCCAGGAGGACCCACGGCGCGGACAGCCTTTCCTCCTCCAGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCACGGCAAATGAGG-CATCCGCATCGCATC----------------------------------------------------------------GCACCTCCAACTGCATCCTGCAATCGGATCGACTTTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAAGCTGGCTAGCTG-------------------------AC-------------------------TCT---------CTGTCCG--------TATCT-------------TC-T
droEre2	scaffold_4929:8749351-8749602 +		CCCCCATCCCAGGAGGACTCACGGCGCGGACAGCCTCTCCTCCTCCAGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCATGGCAAATGAGG-CAGCCGCATCGCATC---------------------------------------------------------------------TCCAACTGCATCCTGCAATCGGATCGACTTTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAAGCTGGCTAGCTG-------------------------TC-------------------------TCT---------CTGACTCTCTGTCCGTTTC--------------CT-T
droYak3	2L:18239509-18239765 -		TCCCCATCCCAGGAGGACTCACGGCGCGGACAGCCTTTCCTCCTCCAGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCACGGCAAATGAGG-CATCCGCATCGCATT---------------------------------------------------------------------TCCAACTGCATCCTGCAATCGGATGGACTTTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAAGCTGGCTAGCTG-------------------------AC-------------------------TCT---------CTGTCCG--------TATCTCCTTTCCGTCTCCG--T
droEug1	scf7180000409209:553636-553876 +		CCCGCATCCCCGGAGGACCCA------GGACAGCCTCTCCTCCTCTAGAGGTGAGTAC------------GGATCCCAGCGACAACGCGACCGTCACGCCCTCATCCACGGCAAATGAGG-CATCCGCATCGCATC---------------------------------------------------------------------TCCAACTGCATCCTGCAACCGGATCAACTCTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAAGCTGGCTAGCTC-------------------------CC-------------------------TCT---------CTGTCTC--------TATTTC---------T--TT-T
droBia1	scf7180000301506:1101714-1101965 +		CCCGCATCCCCGGAGGCCCCACGGCGCGGACAGCCTCTCCTCCTCCAGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCACGGCAAGTGAGG-CATCCGCATCGCATC---------------------------------------------------------------------TCCGACTGCATCCTGCGACCGGATGGACTTTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------GTAAC-TT----GAATG--TGGA---CCAAGCTGGCCACCTC-------------------------CC-------------------------CCT---------CCGTCCGCCCTTTTCTTTC--------------TC-T
droTak1	scf7180000415870:688144-688388 +		CCCGCATCCCCGGAGGACCCACGGCCAGGACAGCCTCTCCTCCTCTAGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCACGGCAAATGAGG-CATCCGCATCGCATC---------------------------------------------------------------------T-CAACTGCATCCTGCGACCGGATCGACTTTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------GTAAC-TT----GAATG--TGGA---CCAAGCTGGCTAGCTT-------------------------CC-------------------------CCT---------CTGTCTG--------CACCTT------------GT-T
droEle1	scf7180000491107:1493068-1493332 +		CCCGCATCCCCGGAGGACCCACGGCCAGGACAGCCTCTCCTCGTCCCGAGGTGAGTAC------------GGATCCCAGCGGCAGCGCGACCGACACGCCCTCATCCACGGCAAATAAGG-CGGCCGCCTCGCATC---------------------------------------------------------TCCAACTGCATCTCCAACTGCATCCCGCCACCGGATCGACTTTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATGTGTGGA---CCAAGCTGGCTAGCTC-------------------------CC-------------------------TCT---------CTCTCTG--TATC--TATCTT---------C--TG-T
droRho1	scf7180000777217:506391-506635 -		CCCGCATCCCCGGAGGACCCACGGCCAGGACAGCCTCTCCTCGTCCCGAGGTGAGTAC------------GGATCCCAGCGCCAGCGTGACCGACACGCCCTCATCCACGGCAAATGAGG-CGACCGCCTCGCATC---------------------------------------------------------------------TCCAACTGCATCCCGCAACCGGATCGACTTTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---GCAAGCTGGCTAGCTC-------------------------CC-------------------------TCT---------CTGTCTG--------TATCT-------------CT-C
droFic1	scf7180000453858:1113345-1113570 +		CCCGCATCCCCGCAGGACCCACGGCCAGGACAGCCTCTCCTCCTCCCGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCACGGCAAGTGAGG-CATCCGCATCGCACC---------------------------------------------------------------------TCCGACT-------------GGATCGAC-TTGTATATTACACGATTAACTTGTCAGAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAGGCTGGCCAGCCC-------------------------C---------------------------------------CGTCCG--------CCTCT-------------CT-C
droKik1	scf7180000302476:1023434-1023683 -		CCCACATCCGCGGCGGACCCACGGCCCGGACAGCATGTCCTCGTCCCGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGCCATGCCCTCATCCACGGCAAGTGAGG-CATCTGCAT--------------------------------------------------------------------------CTCCAACTGCATCCTGCCACCGGATCAACATTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAAGCTGGCCAGCCC-------------------------CA-------------------------TCTCCCCATCTC-------TCTCTC-----------CTTCTCT--CT-C
droAna3	scaffold_13266:12888178-12888433 -		TCCGCATCCTCGGCGGACCAACGGCCCGGATAGCATGTCCTCCTCCCGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCACGGCAAGTGAGG--ATGAG----------------------------------------------------TCCG------------------CATCTGCAACTGCATCCTGCAACCGGATCAACATTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAAGTTGGCCAGCTC-------------------------CT-------------------------TCTCGCTCCTTC-------TCTCTG-----------CCCCTCTCTGTTT
droBip1	scf7180000396730:1033324-1033576 +		TCCGCATCCGCGTCGGACTCATGGCCCGGACAGCATGTCCTCCTCCCGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCACGGCAAGTGAGG-CGTCCGCAT--------------------------------------------------------------------------CTGCAACTGCATCCTGCAACCGGATCAACATTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAAGTTGGCCAGCTC-------------------------CT-------------------------TCTCGCTCTTTC-------TCTCCG-----------CCCCTCTCTGTTT
dp5	3:14238251-14238540 -		TCCGCACCCGCGACGACCCCATGGCCAGGACAGCATCTCCTCGTCCCGAGGTGAGTACTGCCGTGGCGGCGGCTCTCAGCGGCAGCGCGACCGGCATGCCCTCATCCATGGCAAATGATG-GCTGCG----------------------------------------------------TCCACAGCCGCAAATT------CAACTGCACCTGCATCCTGCATCTGGATCTACTTTGTAAATTACATGATTAACTTGTCAAAC-------------------------------------------------------ACTAATTGTTGTTC--------------------TTAAC-GT----GAATG--TGAA---CCGAGTTGGCTCGCTGAGAAGCGCATACAGAGGCGCCCTGCCT-------------------------TCT---------C-----T--------TCTCT-------------TC-T
droPer2	scaffold_4:1077424-1077708 +		TCCGCACCCGCGACGACCCCATGGCCAGGACAGCATCTCCTCGTCCCGAGGTGAGTACTGCCGTGGCGGCGGCTCTCAGCGGCAGCGCGACCGGCATGCCCTCATCCATGGCAAATGATG-GCTGCG----------------------------------------------------TCCACAGCCGCAAATT------CAACTGCACCTGCATCCTGCATCTGGATCTACTTTGTAAATTACATGATTAACTTGTCAAAC-------------------------------------------------------ACTAATTGTTGTTC--------------------TTAAC-GT----GAATG--TGAA---CCGAGTTGGCTCGCTGAGAAGCGCATACAGAGGCGCCCTGCCT----------------------------------------------------TCTCT-------------TC-T
droWil2	scf2_1100000004514:3567856-3568168 -		TCCGCATCCGCGACGCACACACGGGCCGGATAGCATGTCCTCATCCCGAGGTGAGTACTATCGC---GGTGGCTCCCAGCGGCAACGTGACCGGCATGCTCTCATCCATGGCAAATGAGC-GATGAG---------AGAGAGAGCATCATCCCCTCCAAAAAAAAAAAAATAAAAATCAT------------------------CCACAACT----------ACTGGATCTGCTCTATATAT--------------GTTATAT-------------------------ATGTGTATATTTCACAACAAAAAACAAAAAACTAATTCTTGTTT--------------------TTAAC-TTTTTCGAGTGTATGGAAAATAAGGTTGGCTCTGTG------------------------------------------------------TCACTTTCTC-------TCTCTC-----------CCTTTCT--CT-C
droVir3	scaffold_12875:5921184-5921521 -		CACGCATCCGCGACGACCCCATGGCCAGGACAGCATCTCCTCTTCCCGAGGTGAGTACTGCCGCAACGGTGGCTCCCAGCGGCAGCGCGACCGGCATGCGCTCATCCATGGCAAATGAGCGG--G-----------GGCGAA---------------------------------------------------------------------------CGCAAATCACAACCAATTTGTAAATTACATAATTAACTTGAAAACCAACA--------AACAAACAAACAA------------ACAAACAGAAAACGACCAACTAATTGTTGTTCTCTC----------------TTAAC-TT----GAATG--TAAA---CCAAGTTAGCTCAATGAGAAGCGCGAAGAAGGGCACGCTTCAGTGCCCGCTTTAACTCTCACGCGCTCTCTCATTCT---TTCTCTT--CA----TATAT-------------AT-T
droMoj3	scaffold_6496:24132236-24132565 +		CACGCATCCCCGACGGCCCCATGGCCCGGACAGCATCTCCTCGTCCCGAGGTGAGTACTGCCGCGATGGTGGCTCCCAGAGGCAGCGCGACCGGCATGCGCTCATCCATGGCAAATGAGCGG--G-----------GGCGAGGCAATCA----------------------------------------------------------------------------CAACCAATTTTGTAAATTACATAATTAACTTCAAAA-CAACAACAACAACAACAAAAGAGCAA-----------CAAAAACAAAAATCAGCCAACTAATTGTTTCTC--TCTCTCTCTCACTCTCTGTTAACTTT----GAATG--TAGA---CCAAGTTGGCTTAATGAGAAGCGCAAAGAAGGGCACGCTG-AGTGCCC--------------------ACT---------C-ATAAA--------GCTCT-------------CC-T
droGri2	scaffold_15112:843259-843456 -		TACGCATCCGCGCCACCAGCATGGCCCGGACAGCATCTCCTCATCCCGAGGTGAGTACTGCCGCGGCACCGGCTCCCAGCGGCAGCGCGACAGGCATGCCCTCATCCATGGCAAATGAGC-AAAATGAGCCAAATG----------------------------------------------------------------AG---CCAAAGGGAACACCCAAATCACAACCAATTTGTAAATTACACAATTAACTTTCAAAAC---------------------------------------------------------AAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

CCCCCATCCCAGGAGGACCCACGGCGCGGACAGCCTTTCCTCCTCCAGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCACGGCAAATGAGG-CATCCGCATCGCATC----------------------------------------------------------------GCCTCTCCAACTGCATCCTGCAATCGGATCGACTTTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAAGCTGGCTAGCTG-------------------------AC-------------------------TCT---------CTGTCCG--------TTTCT-------------CC-T	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.............................................................................................................................................................................................................................AATCGGATCGACTTTGTATATTACAC........................................................................................................................................................................................................................................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................CTAGCTG-------------------------AC-------------------------TCT---------CTGTCCG--------TTTCT-------------CC-T	27	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................AGTAC------------GGATCCCAGCGACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................ATCCGCATCGCATC----------------------------------------------------------------GCCTCTCCAACTG..........................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................CTGGCTAGCTG-------------------------AC-------------------------TCT---------CTGTC................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................ATCGGATCGACTTTGTATATTACACGAT.....................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

CCCCCATCCCAGGAGGACCCACGGCGCGGATAGCCTTTCCTCCTCCAGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCACGGCAAATGAGG-CATCCGCATCGCATC----------------------------------------------------------------GCCTCTCCAACTGCATCCTGCAATCGGATCGACTTTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAAGCTGGCTAGTTG-------------------------AC-------------------------TCT---------CTGTCCG--------TTTCT-------------CC-T	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
....................................................................................................................................................................................................................................................................................................................................................................................GGA---CCAAGCTGGCTAGTTG-------------------------AC-------------------------TCT---------C....................................	25	1	1.00	1	1	0	0	0
.........................................................................................................................................................................................................................CTGCAATCGGATCGACTTTGT.................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1
................................................................................................................................ATCGCATC----------------------------------------------------------------GCCTCTCCAACTGC.........................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0
..........................................................................................................................ATCCGCATCGCATC----------------------------------------------------------------GCCTCTCCA..............................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0

dm3

CCCCCATCCCAGGAGGACCCACGGCGCGGACAGCCTTTCCTCCTCCAGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCACGGCAAATGAGG-CATCCGCATCGCATC----------------------------------------------------------------GCACCTCCAACTGCATCCTGCAATCGGATCGACTTTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAAGCTGGCTAGCTG-------------------------AC-------------------------TCT---------CTGTCCG--------TATCT-------------TC-T	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
...................CACGGCGCGGACAGCCTTTCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................CGGCGCGGACAGCCTTTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........CAGGAGGACCCACGGCGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................AC------------GGATCCCAGCGACAGCGCGACC...................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TTGTCAAAC---------------------------------------------------------TAATTGTTGTT....................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................GATCCCAGCGACAGCGCGAC....................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................TCCTGCAATCGGATCGAC......................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................GTAC------------GGATCCCAGCGACAGCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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........................................................................ATCCCAGCGACAGCGCGACC...................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................AGTAC------------GGATCCCAGCGACAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................GATCGACTTTGTATATTGG..........................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................GCATCCTGCAATCGGAAG.........................................................................................................................................................................................................................................................................	18	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

CCCCCATCCCAGGAGGACTCACGGCGCGGACAGCCTCTCCTCCTCCAGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCATGGCAAATGAGG-CAGCCGCATCGCATC---------------------------------------------------------------------TCCAACTGCATCCTGCAATCGGATCGACTTTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAAGCTGGCTAGCTG-------------------------TC-------------------------TCT---------CTGACTCTCTGTCCGTTTC--------------CT-T	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
..............GGACTCACGGCGCGGACAGCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	1	1	0
..........................................CTCCAGAGGTGAGTAC------------GGATCCCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	2	0
.........................................................................................................................................................................................................................CTGCAATCGGATCGACTTTGT.................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
...............GACTCACGGCGCGGACAGCCTCTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0
......................GGCGCGGACAGCCTCTCCTCCTCCAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................T----GAATG--TGGA---CCAAGCTGGCT..........................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................TG--TGGA---CCAAGCTGGCTAGCTG-------------------------T...........................................................................	23	1	1.00	1	0	0	0	0	1	0	0
........................................................................ATCCCAGCGACAGCGCGACCG..................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0
......TCCCAGGAGGACTCACGGCGCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0
.......................................CTCCTCCAGAGGTGAGTAC------------GGATCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................ATCCTGCAATCGGATCGACTTTGT.................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0
......................................................................................................................................................................................................................ATCCTGCAATCGGATCGAC......................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
................................................................................GACAGCGCGACCGACACGCCCT.........................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................GAATG--TGGA---CCAAGCTGGCTAGCTG-------------------------TC-------------------------.................................................	27	1	1.00	1	0	0	0	0	0	1	0
............................................CCAGAGGTGAGTAC------------GGATCCCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................CCAAGCTGGCTAGCTG-------------------------TC-------------------------TCT---------.....................................	21	1	1.00	1	0	0	0	1	0	0	0
....CATCCCAGGAGGACTCACGGCGCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1	0	0
....................................................................................................................................................................................................................................................................AAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--T...........................................................................................................................	28	1	1.00	1	0	0	0	0	0	1	0
...........................................................................................................................GCCGCATCGCATC---------------------------------------------------------------------TCCAACTGCATCC.....................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................CTAGCTG-------------------------TC-------------------------TCT---------CTGACTCTCTGTCCGT.....................	28	1	1.00	1	0	0	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................GCTAGCTG-------------------------TC-------------------------TCT---------CTGACTCTCTGT.........................	25	1	1.00	1	1	0	0	0	0	0	0
................................................................................GACAGCGCGACCGACACGCCC..........................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0

droYak3

TCCCCATCCCAGGAGGACTCACGGCGCGGACAGCCTTTCCTCCTCCAGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCACGGCAAATGAGG-CATCCGCATCGCATT---------------------------------------------------------------------TCCAACTGCATCCTGCAATCGGATGGACTTTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAAGCTGGCTAGCTG-------------------------AC-------------------------TCT---------CTGTCCG--------TATCTCCTTTCCGTCTCCG--T	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................GGA---CCAAGCTGGCTAGCTG-------------------------AC-------------------------T................................................	22	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0
................................................................................GACAGCGCGACCGACACGCCCT.........................................................................................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................ATG--TGGA---CCAAGCTGGCTAGCTG-------------------------AC-------------------------T................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................TGCAATCGGATGGACTTTGT.................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CT---------CTGTCCG--------TATCTCCTTTCCGTCTCC....	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................GAGG-CATCCGCATCGCATT---------------------------------------------------------------------TCCAACTG..........................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................GA---CCAAGCTGGCTAGCTG-------------------------AC-------------------------T................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................AATGAGG-CATCCGCATCGCAT........................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................ATCCACGGCAAATGAGG-CATCCGC...............................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................AAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----G..................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............GACTCACGGCGCGGACAGCCTTTCCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......CCCAGGAGGACTCACGGCGCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................GCGGACAGCCTTTCCTCCTCCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........CCAGGAGGACTCACGGCGCGGACAGCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................CATCCGCATCGCATT---------------------------------------------------------------------TCCAACTGCATCCT....................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................G-------------------------AC-------------------------TCT---------CTGTCCG--------TATCTCCTTTCCGT........	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................GGA---CCAAGCTGGCTAGCTG-------------------------AC-------------------------TCT---------CT...................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................TATATTACACGATTAACTTGTC............................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................GACACGCCCTCATCCACGGCAAATGA.........................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............GACTCACGGCGCGGACAGCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................CTG-------------------------AC-------------------------TCT---------CTGTCCG--------TATCTCCT..............	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................GCGCGGACAGCCTTTCCTCCTCCAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....................................................GAGTAC------------GGATCCCAGCGACAGCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........GGAGGACTCACGGCGCGGACAGCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................GGCAAATGAGG-CATCCGCAT.............................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................CTAGCTG-------------------------AC-------------------------TCT---------CTGTCC...............................	18	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
..........................................................................................................CACGGCAAATGAGG-CATCCGC...............................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................AATCGGATGGACTTTGTATATTACACGA......................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

CCCGCATCCCCGGAGGACCCA------GGACAGCCTCTCCTCCTCTAGAGGTGAGTAC------------GGATCCCAGCGACAACGCGACCGTCACGCCCTCATCCACGGCAAATGAGG-CATCCGCATCGCATC---------------------------------------------------------------------TCCAACTGCATCCTGCAACCGGATCAACTCTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAAGCTGGCTAGCTC-------------------------CC-------------------------TCT---------CTGTCTC--------TATTTC---------T--TT-T	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CCCGCATCCCCGGAGGCCCCACGGCGCGGACAGCCTCTCCTCCTCCAGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCACGGCAAGTGAGG-CATCCGCATCGCATC---------------------------------------------------------------------TCCGACTGCATCCTGCGACCGGATGGACTTTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------GTAAC-TT----GAATG--TGGA---CCAAGCTGGCCACCTC-------------------------CC-------------------------CCT---------CCGTCCGCCCTTTTCTTTC--------------TC-T	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CCCGCATCCCCGGAGGACCCACGGCCAGGACAGCCTCTCCTCCTCTAGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCACGGCAAATGAGG-CATCCGCATCGCATC---------------------------------------------------------------------T-CAACTGCATCCTGCGACCGGATCGACTTTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------GTAAC-TT----GAATG--TGGA---CCAAGCTGGCTAGCTT-------------------------CC-------------------------CCT---------CTGTCTG--------CACCTT------------GT-T	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CCCGCATCCCCGGAGGACCCACGGCCAGGACAGCCTCTCCTCGTCCCGAGGTGAGTAC------------GGATCCCAGCGGCAGCGCGACCGACACGCCCTCATCCACGGCAAATAAGG-CGGCCGCCTCGCATC---------------------------------------------------------TCCAACTGCATCTCCAACTGCATCCCGCCACCGGATCGACTTTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATGTGTGGA---CCAAGCTGGCTAGCTC-------------------------CC-------------------------TCT---------CTCTCTG--TATC--TATCTT---------C--TG-T	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CCCGCATCCCCGGAGGACCCACGGCCAGGACAGCCTCTCCTCGTCCCGAGGTGAGTAC------------GGATCCCAGCGCCAGCGTGACCGACACGCCCTCATCCACGGCAAATGAGG-CGACCGCCTCGCATC---------------------------------------------------------------------TCCAACTGCATCCCGCAACCGGATCGACTTTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---GCAAGCTGGCTAGCTC-------------------------CC-------------------------TCT---------CTGTCTG--------TATCT-------------CT-C	Size	Hit Count	Total Norm	Total
No Reads

droFic1

CCCGCATCCCCGCAGGACCCACGGCCAGGACAGCCTCTCCTCCTCCCGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCACGGCAAGTGAGG-CATCCGCATCGCACC---------------------------------------------------------------------TCCGACT-------------GGATCGAC-TTGTATATTACACGATTAACTTGTCAGAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAGGCTGGCCAGCCC-------------------------C---------------------------------------CGTCCG--------CCTCT-------------CT-C	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CCCACATCCGCGGCGGACCCACGGCCCGGACAGCATGTCCTCGTCCCGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGCCATGCCCTCATCCACGGCAAGTGAGG-CATCTGCAT--------------------------------------------------------------------------CTCCAACTGCATCCTGCCACCGGATCAACATTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAAGCTGGCCAGCCC-------------------------CA-------------------------TCTCCCCATCTC-------TCTCTC-----------CTTCTCT--CT-C	Size	Hit Count	Total Norm	Total
No Reads

droAna3

TCCGCATCCTCGGCGGACCAACGGCCCGGATAGCATGTCCTCCTCCCGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCACGGCAAGTGAGG--ATGAG----------------------------------------------------TCCG------------------CATCTGCAACTGCATCCTGCAACCGGATCAACATTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAAGTTGGCCAGCTC-------------------------CT-------------------------TCTCGCTCCTTC-------TCTCTG-----------CCCCTCTCTGTTT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
........................................................................................GACCGACACGCCCTCATCC....................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
........................................................................................GACCGACACGCCCTCATCCACGGCAAG............................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................ATGAG----------------------------------------------------TCCG------------------CATCTGCAACTGCATCCT....................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
..........CGGCGGACCAACGGCCCGGATAGCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................TT----GAATG--TGGA---CCAAGTTGGCC..........................................................................................................	22	1	1.00	1	0	0	0	0	1	0
................................................AGGTGAGTAC------------GGATCCCAGCGACA...........................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................AAC-TT----GAATG--TGGA---CCAAGTTGGCC..........................................................................................................	25	1	1.00	1	0	1	0	0	0	0

droBip1

TCCGCATCCGCGTCGGACTCATGGCCCGGACAGCATGTCCTCCTCCCGAGGTGAGTAC------------GGATCCCAGCGACAGCGCGACCGACACGCCCTCATCCACGGCAAGTGAGG-CGTCCGCAT--------------------------------------------------------------------------CTGCAACTGCATCCTGCAACCGGATCAACATTGTATATTACACGATTAACTTGTCAAAC---------------------------------------------------------TAATTGTTGTTC--------------------TTAAC-TT----GAATG--TGGA---CCAAGTTGGCCAGCTC-------------------------CT-------------------------TCTCGCTCTTTC-------TCTCCG-----------CCCCTCTCTGTTT	Size	Hit Count	Total Norm	Total
No Reads

dp5

TCCGCACCCGCGACGACCCCATGGCCAGGACAGCATCTCCTCGTCCCGAGGTGAGTACTGCCGTGGCGGCGGCTCTCAGCGGCAGCGCGACCGGCATGCCCTCATCCATGGCAAATGATG-GCTGCG----------------------------------------------------TCCACAGCCGCAAATT------CAACTGCACCTGCATCCTGCATCTGGATCTACTTTGTAAATTACATGATTAACTTGTCAAAC-------------------------------------------------------ACTAATTGTTGTTC--------------------TTAAC-GT----GAATG--TGAA---CCGAGTTGGCTCGCTGAGAAGCGCATACAGAGGCGCCCTGCCT-------------------------TCT---------C-----T--------TCTCT-------------TC-T	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................................................................TAAC-GT----GAATG--TGAA---CCGAGTTGG............................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGCGCATACAGAGGC...................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...........GACGACCCCATGGCCAGGACAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0	0	0	0
......................................................................................................CATCCATGGCAAATGATG-G.....................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................GCACCTGCATCCTGCATCTGGATCTA.......................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................CGTCCCGAGGTGAGTACTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0	0	0	0
.................................................GGTGAGTACTGCCGTGGCGGCGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................CCCATGGCCAGGACAGCATCTCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................ATGGCCAGGACAGCATCTCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................ACTTGTCAAAC-------------------------------------------------------ACTAATTGTTG......................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................CCGCAAATT------CAACTGCACCTG..........................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................AA---CCGAGTTGGCTCGCTGAGAAGCGC.............................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................CGTCCCGAGGTGAGTACTGCCGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................CGAGGTGAGTACTGCCGTGGCGGCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................CGTCCCGAGGTGAGTACTGCCGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0

droPer2

TCCGCACCCGCGACGACCCCATGGCCAGGACAGCATCTCCTCGTCCCGAGGTGAGTACTGCCGTGGCGGCGGCTCTCAGCGGCAGCGCGACCGGCATGCCCTCATCCATGGCAAATGATG-GCTGCG----------------------------------------------------TCCACAGCCGCAAATT------CAACTGCACCTGCATCCTGCATCTGGATCTACTTTGTAAATTACATGATTAACTTGTCAAAC-------------------------------------------------------ACTAATTGTTGTTC--------------------TTAAC-GT----GAATG--TGAA---CCGAGTTGGCTCGCTGAGAAGCGCATACAGAGGCGCCCTGCCT----------------------------------------------------TCTCT-------------TC-T	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
....................................................................................................................GATG-GCTGCG----------------------------------------------------TCCACAGC....................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0
.............................ACAGCATCTCCTCGTCCCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
.......................GCCAGGACAGCATCTCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................GAATG--TGAA---CCGAGTTGGCTC.........................................................................................................	21	1	1.00	1	0	1	0	0	0	0
..............................................................GTGGCGGCGGCTCTCAGCGGCAGCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0

droWil2

TCCGCATCCGCGACGCACACACGGGCCGGATAGCATGTCCTCATCCCGAGGTGAGTACTATCGC---GGTGGCTCCCAGCGGCAACGTGACCGGCATGCTCTCATCCATGGCAAATGAGC-GATGAG---------AGAGAGAGCATCATCCCCTCCAAAAAAAAAAAAATAAAAATCAT------------------------CCACAACT----------ACTGGATCTGCTCTATATAT--------------GTTATAT-------------------------ATGTGTATATTTCACAACAAAAAACAAAAAACTAATTCTTGTTT--------------------TTAAC-TTTTTCGAGTGTATGGAAAATAAGGTTGGCTCTGTG------------------------------------------------------TCACTTTCTC-------TCTCTC-----------CCTTTCT--CT-C	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
................................................................................................................AAATGAGC-GATGAG---------AGAGAGA................................................................................................................................................................................................................................................................................................................................................................	21	1	6.00	6	0	1	4	1	0
................................................................................................................AAATGAGC-GATGAG---------AGAGA..................................................................................................................................................................................................................................................................................................................................................................	19	1	5.00	5	0	2	2	1	0
................................................................................................................AAATGAGC-GATGAG---------AGAGAGAGC..............................................................................................................................................................................................................................................................................................................................................................	23	1	5.00	5	0	1	4	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................TAAGGTTGGCTCTGTG------------------------------------------------------TCACT..........................................	21	1	3.00	3	3	0	0	0	0
..........................................................TATCGC---GGTGGCTCCCAGCGG.............................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0
................................................................................................................AAATGAGC-GATGAG---------AGAGAGAGCAT............................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0
................................................................................................................AAATGAGC-GATGAG---------AGAGAG.................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................GGCTCTGTG------------------------------------------------------TCACTTTCTC-------T.............................	20	1	1.00	1	0	0	1	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................AAGGTTGGCTCTGTG------------------------------------------------------TCACT..........................................	20	1	1.00	1	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................AGTGTATGGAAAATAAGGTTGG............................................................................................................	22	1	1.00	1	0	0	1	0	0
............................................................................................................................................................................................................CCACAACT----------ACTGGATCTGCTCT...................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................GAGTGTATGGAAAATAAGGTT..............................................................................................................	21	1	1.00	1	0	0	1	0	0
...................................................................................AACGTGACCGGCATGCTCTCATCCATGGC...............................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	1	0	0
..................................................................................................................ATGAGC-GATGAG---------AGAGAGAGC..............................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0
................................GCATGTCCTCATCCCGAGGTGAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0
.............CGCACACACGGGCCGGATAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
................................GCATGTCCTCATCCCGAGGTGAGTACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0
..............................................................................................................GCAAATGAGC-GATGAG---------AGAGAGAG...............................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0
...............................................................................................................CAAATGAGC-GATGAG---------AGAGAGAG...............................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................GTATGGAAAATAAGGTTGGC...........................................................................................................	20	1	1.00	1	0	1	0	0	0
..............................................................................................................GCAAATGAGC-GATGAG---------AGAGAGAGC..............................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0
......TCCGCGACGCACACACGGGCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................AATAAGGTTGGCTCTGTG------------------------------------------------------T..............................................	19	1	1.00	1	0	0	1	0	0
.................................................................................................................................................................................................................ACT----------ACTGGATCTGCTCTATA................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0

droVir3

CACGCATCCGCGACGACCCCATGGCCAGGACAGCATCTCCTCTTCCCGAGGTGAGTACTGCCGCAACGGTGGCTCCCAGCGGCAGCGCGACCGGCATGCGCTCATCCATGGCAAATGAGCGG--G-----------GGCGAA---------------------------------------------------------------------------CGCAAATCACAACCAATTTGTAAATTACATAATTAACTTGAAAACCAACA--------AACAAACAAACAA------------ACAAACAGAAAACGACCAACTAATTGTTGTTCTCTC----------------TTAAC-TT----GAATG--TAAA---CCAAGTTAGCTCAATGAGAAGCGCGAAGAAGGGCACGCTTCAGTGCCCGCTTTAACTCTCACGCGCTCTCTCATTCT---TTCTCTT--CA----TATAT-------------AT-T	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................TTAGCTCAATGAGAAGCGCGAAGATC......................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................AATTAACTTGAAAACCAACA--------............................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCCCGCTTTAACTCTC.........................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................CAGCGCGACCGGCATGCG...........................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAGTGCCCGCTTTAACTCTCACGCG....................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................GTTAGCTCAATGAGAAGCGCGA...........................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................A---CCAAGTTAGCTCAATGAGAAGCGCGA...........................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................................................................TAGCTCAATGAGAAGCGCGAAGAAGGG....................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................C----------------TTAAC-TT----GAATG--TAAA---CCAA.................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................TTGTTCTCTC----------------TTAAC-TT----GAAT...............................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................AACAAACAA------------ACAAACAGAAAACGACCAAC...............................................................................................................................................................................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................GGCCAGGACAGCATCTCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................CAAACAGAAAACGACCAACTA.............................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................CTTCCCGAGGTGAGTACTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................CCCCATGGCCAGGACAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................GGCAAATGAGCGG--G-----------GGCGAA---------------------------------------------------------------------------CG....................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............CGACCCCATGGCCAGGACAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................GACCAACTAATTGTTGTTCTCTC----------------TTAAC-T........................................................................................................................................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........CGCGACGACCCCATGGCCAGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................CGCTTCAGTGCCCGCTTTAACT............................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................TAATTAACTTGAAAACCAACA--------AACA........................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................CAAACAGAAAACGACCAACT..............................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................CAATTTGTAAATTACATAATTAACTTG..............................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................AAAACCAACA--------AACAAACAAACA................................................................................................................................................................................................................	22	3	0.33	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

CACGCATCCCCGACGGCCCCATGGCCCGGACAGCATCTCCTCGTCCCGAGGTGAGTACTGCCGCGATGGTGGCTCCCAGAGGCAGCGCGACCGGCATGCGCTCATCCATGGCAAATGAGCGG--G-----------GGCGAGGCAATCA----------------------------------------------------------------------------CAACCAATTTTGTAAATTACATAATTAACTTCAAAA-CAACAACAACAACAACAAAAGAGCAA-----------CAAAAACAAAAATCAGCCAACTAATTGTTTCTC--TCTCTCTCTCACTCTCTGTTAACTTT----GAATG--TAGA---CCAAGTTGGCTTAATGAGAAGCGCAAAGAAGGGCACGCTG-AGTGCCC--------------------ACT---------C-ATAAA--------GCTCT-------------CC-T	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................ACGCTG-AGTGCCC--------------------ACT---------C-ATAAA--------GCT...................	25	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................TAACTTT----GAATG--TAGA---CCAAGTTGG............................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................GGCAATCA----------------------------------------------------------------------------CAACCAATTTTGT.................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................AACTTCAAAA-CAACAACAACAAC............................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................CTCTGTTAACTTT----GAATG--TA..........................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................ATG--TAGA---CCAAGTTGGCTT.........................................................................................................	19	1	1.00	1	1	0	0	0	0	0
..............................................................................GAGGCAGCGCGACCGGCAT..............................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................CTTAATGAGAAGCGCAAAGAAG......................................................................................	22	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................G-AGTGCCC--------------------ACT---------C-ATAAA--------GC....................	19	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................CACTCTCTGTTAACTTT----GAAT...............................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................CTTAATGAGAAGCGCAAAG.........................................................................................	19	1	1.00	1	1	0	0	0	0	0
......................................................................................................CATCCATGGCAAATGAGCGG--G-----------GGC....................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
...................................................................................................................................................................................................................................................................AA-CAACAACAACAACAACAAAAGAGC.................................................................................................................................................................................................................	26	2	0.50	1	0	0	0	0	0	1

droGri2

TACGCATCCGCGCCACCAGCATGGCCCGGACAGCATCTCCTCATCCCGAGGTGAGTACTGCCGCGGCACCGGCTCCCAGCGGCAGCGCGACAGGCATGCCCTCATCCATGGCAAATGAGC-AAAATGAGCCAAATG----------------------------------------------------------------AG---CCAAAGGGAACACCCAAATCACAACCAATTTGTAAATTACACAATTAACTTTCAAAAC---------------------------------------------------------AAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
................................................................................GGCAGCGCGACAGGCATGCCCTCATCC....................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0

dsi_27766

2r:6391933-6392082 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-22.3	-22.2	-22.2