ID:

dsi_27763

 Coordinate:

3r:25254446-25254595 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-31.4 -31.2 -30.8

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TACGATAAGTTAAAGCCGCAGAGCGTCGTTTGCGTTAACTACGTCATAAGGTGAGTCATTCAGATTTCCAATATATATATATATACTAACCGTAGAACAAACGGGTCCCAAGAAGACCGAATTGAGCCATTTCTTTGGGCGGGATATTCCAATGAAGCGGAACAATGCCGGATATTTGCTCATTACATTTTTGGGCGAGTTTTTTATCTTTTAATTAAGCCACCAAGTGGCAGGAAGTGAAATTCGTATT
**************************************************..(((((.....)))))......................((((.......))))............(((.((((..((.((((.(((((........))))).)))).))..))))..)))..(((((((((.........)))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 M053
female body
 M024
male body		 O002
Head
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 M023
head
...................................................................................................................................................................AATGCCGGATATTTGCTCATTAC................................................................ 23 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
...........AAAGCCGCAGAGCGTCGTTTGCGTT...................................................................................................................................................................................................................... 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
..........TAAAGCCGCAGAGCGTCGTTTGC......................................................................................................................................................................................................................... 23 0 1 2.00 2 0 0 0 0 1 1 0 0 0 0 0 0 0
TACGATAAGTTAAAGCCGCAGAGCGTCGT............................................................................................................................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......AGTTAAAGCCGCAGAGCGTCGTTTG.......................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................CTGGGCGGGATATTCCAATGAAGCGGAA........................................................................................ 28 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TTCCAATGAAGCGGAACAATGCCGGAT............................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.ACGATAAGTTAAAGCCGCAGAGC.................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................TTTGGGCGAGTTTTTTATC.......................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................TTGGGCGGGATATTCCAATGAAGCGGAA........................................................................................ 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....TAAGCTAAAGCCGCAGAGCGTCGTT............................................................................................................................................................................................................................ 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TTCAATGAAGCGGAAC....................................................................................... 16 1 4 0.50 2 0 0 1 0 0 0 0 0 0 1 0 0 0
..........................................................TTGAGATTTCCCATATATA............................................................................................................................................................................. 19 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0
........................................................................................................................................................................................ATATTCTTGGGCGAGTTTT............................................... 19 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................GGCGAGAGGTGAAATTCGTA.. 20 3 7 0.29 2 0 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................GGAAGTAAAATTCGTA.. 16 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................................GCAAGAGGTGAAATTCGT... 18 2 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..........TGAAACCGCAGAGCGTCGCT............................................................................................................................................................................................................................ 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................TTTTAACTTCCAATTAAGCCA............................ 21 3 12 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................TCAATGAAGCGGAAC....................................................................................... 15 1 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................GAATGCCGGATATTT......................................................................... 15 1 17 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................AGAAGACCCTGTTGAGCCA......................................................................................................................... 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................................TTCAATGAAGCGGAA........................................................................................ 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................TTGGGCGAGTTTTTCTTTTTTT...................................... 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................TTCAATGAAGCGGAACT...................................................................................... 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ATGCTATTCAATTTCGGCGTCTCGCAGCAAACGCAATTGATGCAGTATTCCACTCAGTAAGTCTAAAGGTTATATATATATATATGATTGGCATCTTGTTTGCCCAGGGTTCTTCTGGCTTAACTCGGTAAAGAAACCCGCCCTATAAGGTTACTTCGCCTTGTTACGGCCTATAAACGAGTAATGTAAAAACCCGCTCAAAAAATAGAAAATTAATTCGGTGGTTCACCGTCCTTCACTTTAAGCATAA
**************************************************..(((((.....)))))......................((((.......))))............(((.((((..((.((((.(((((........))))).)))).))..))))..)))..(((((((((.........)))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M023
head
 GSM343915
embryo
 M024
male body		 M025
embryo
 SRR618934
dsim w501 ovaries
 SRR902009
testis
...........TTTCGGCGTCTAGTAGAAAAC.......................................................................................................................................................................................................................... 21 3 2 1.50 3 0 0 2 0 1 0 0 0
.............................................................................................................TTCTTCAGGTTTAACTCGGCAAA...................................................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................ATGTAAAAACCCGCT.................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................AGCAATGTAAAAACCCGTTCTAA................................................ 23 3 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................TCGCCTTGTTTCGGCCTACAGACG....................................................................... 24 3 1 1.00 1 0 0 0 1 0 0 0 0
..............................ACGCAATTGACGCAGT............................................................................................................................................................................................................ 16 1 2 0.50 1 0 1 0 0 0 0 0 0
.................................................................................ATATGATTGGCAACATGATTG.................................................................................................................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0
...............................CGCAATCGATGCAGT............................................................................................................................................................................................................ 15 1 3 0.33 1 0 1 0 0 0 0 0 0
............TTCGGCGTCTAGTAGAAAAC.......................................................................................................................................................................................................................... 20 3 9 0.22 2 0 0 0 0 0 2 0 0
..........................................................................................................................................................................................TAAAAACCCGCTCTAA................................................ 16 1 6 0.17 1 0 1 0 0 0 0 0 0
............................................................CTCTAAAGGTTATATA.............................................................................................................................................................................. 16 1 9 0.11 1 0 0 0 0 0 0 1 0
..........................................................AAGGCTAAAGGATGTATATAT........................................................................................................................................................................... 21 3 13 0.08 1 0 0 0 0 0 0 0 1
...................................................................................................................................................................................AGCAATGTAAAAACCC....................................................... 16 1 13 0.08 1 0 1 0 0 0 0 0 0
.................................................................................ATATGATTGGCAACATGAT...................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:25254396-25254645 + dsi_27763 TACGATAAGTTAAAGCCGCAGAGCGTCGTTTGCGTTAACTACGTCATAAGGTGAGTCATT-CAGA---------TTTCCAAT---------------AT-AT----------------------------------------------------A--------------TA-TATATACTAACCGTAGAAC----AA-ACGGGTCCCAAG--A----------AGACCGAAT-TGAGCCATTTCTT---T--GGGCGGG-ATA----TTCC------------AATGAA----------------------------GC--------GGAACAATGCCGGATA-TTTGCTCATT-ACATTTT------------------------------TGGG--CGAG----------------------T--TTTTTATCTTTTAATTAAGCC--ACCAA----GTGGCAGGAAGTGAAAT--------TCG--TATT
droSec2 scaffold_4:4754013-4754258 + TACGATAAGCTAAAGCCGCAGAGCGTCGTTTGCGTTAACTACGTCATAAGGTGAGTCATT-CAGA---------TTTCCAAT---------------AT-----------------------------------------------------------------------A-TATATACTAACCGTAGAAC----AA-ACGGGTCCCAAG--A----------AGACCGAAT-TGAGCAATTTCAT---T--GGGCGGG-ATA----TTCC------------AATGAA----------------------------GC--------GGAACAATGCCGGATA-TTTGCTCATT-ACATTTT------------------------------TGGG--CGAG----------------------T--TTTTTATCTTTTAATTAAGCC--ACCAA----GTGGCAGGAAGTGAAAT--------TCG--TATT
dm3 chr3R:25907994-25908251 + TACGATAAGTTAAAGCCGCAGAGCGTCGTTTGCGTTAACTATGTCATAAGGTGAGTCAGT-CAGA---------TTTCCAAT---------------AT-AT--------------------------------------------------ATA--------------TA-TATATACTAACCGTAGAACAA-CAA-ACGGGTCCCAAA--G---------AATACCGAAT-TGAGCCATTTCAC---T--GGGCGGG-ATT----TTCA------------ATTGGC----------------------------GC--------GGAACAATGCCGGATA-TATGCTCATT-ACATTTT------------------------------TGGG--CAAG----------------------TTAATTTTATCATTTAATTAAGCC--ACCAA----A---CAGGAAGTGAAATTC-----TTCG--TATT
droEre2 scaffold_4820:2091204-2091460 - TACGATAAGCTGAAGCCGCAGAGCGTCGTTTGCGTTAACTACGTCATCAGGTGAGTCAGT-CAGA---------TGTCCAAT---------------AT-ATC-C------------------AT--GT-----------------------ATC------------C--A-TATATACTAACCGTAGAAC-----A-ACGGGTCCCAAA--G----------ACACCGAAT-TGAGCCATTTTAT---T--GGGCGGG-T--------CCCTTGAA----CTTTTGAT----------------------------GC--------GGAACAATGCCGGATA-TTTGCTCATT-ACATTTT------------------------------CGGG---GAG----------------------T--TTTTTATCTATTAATTAAGCC--ACCAA----G---CAGGAAGTGAATT--------TCT--TATT
droYak3 3R:26839518-26839777 + TACGATAAGCTGAAGCCACAGAGCGTCGTTTGCGTGAACTACGTCATAAGGTGAGTCAGT-CAGA---------TTTCCAAT---------------AT-ATC-T------------------AT--AT-----------------------ATA-----------CTATA-TATATACTAACTGTAGAAC-----A-ACGGGTCCCAAG--G----------AGACCGAAT-TGAGCTATTATAT---T--GGGCGGG-TTTTCTTTTCC------------ATTGAA----------------------------GC--------GGAACAATGCCGGATA-TTTGCTCATA-ACATTTT------------------------------CGGC---GAG----------------------T--TTTTTATCTTTTAATTAAGCC--ACCAA----G---CAGGAAGTGAATT--------TCG--TATT
droEug1 scf7180000409555:391460-391698 + TACGACAAGCTAAAGCCGCAGAGCGTTGTCTGCGTTAACTACGTCATAAGGTGAGTCAGT-CAGA---------TTTC--AT---------------AT-ACTTT------------------AT--------------------ATCG--------------------TA-TATATACTAATCGCAGAAG-----A-ACGGGTCC------G----------AGACCGAAT-TGAGCCAACT--T-----GGGGCGGG-ATT----TTCT------------ATTGAA----------------------------CC--------GGAACAATGCCGGATA-TTTGCTCATT-ACAATTC---------------------------------------G----------------------T--TTTTTATCTTTTAATTAGGCC--GCCAA----G---CGGGAAGTGAAAT--------TCC--CTTT
droBia1 scf7180000302113:1480939-1481220 - TATGATAAACTGAAGCCCCAGAGCGTCGTTTGCGTCAACTACGTCATAAGGTGAGTCAGT-CAGA---------TACC--AG---------------AT-ACCAGATTT-----------TAG------CT--------------ATCCTATGTA-----------CCATGT--TTTACTAACCGTAGAAA-----C-GCGGGTCCCAAA--G----------AGACCGAAT-TGAGCCAATT--G-----GGGGCGGG-ACT----TTGG-----GTTTTCTATTGAA----------------------------CC--------GGAACAATGCCGGATA-TTTGCTCATT-ACACTTTT-----------------------------CGGG---GGG-----------------AC-T-C--TTTTTATCTTTTAATTAAGCC--ACCAA----G---CGGGAAGTGAAATTC-ACAATTCC--CTTT
droTak1 scf7180000415765:327927-328198 + TATGATAAACTAAAGCCACAGAGTGTCGTTTGCGTGAACTACGTCATAAGGTGAGTCAGT-CAGA---------TCTCTATTTT-------------TT-ACCCT---------------------------------------------ATATA-----------CCATAT--TATACTAATTGTAGAAG----CA-ACGGGTCCCGAA--A----------AGACCGAAT-TGAGCCAATT--T---T--AGGTAGAAATT----TTCG-----ATTTTCTATGGAA----------------------------CC--------GGAACAATGCCGGATAATTTGCTCATT-ACATTTATTTTTT------------------------TGGG--GGAA--------------------T-T--TTTTTATCTTTTAATTAAGCC--ACCAA----G---CGGGAAGTGAAAT--------TCT--CTTT
droEle1 scf7180000491280:2193993-2194251 + TACGATAAACTAAAGCCACAGAGCGTTGTTTGCGTTAACTACGTCATAAGGTGAGTCAGT-CAGA---------TTTC--AT---------------AT-AT----------------------------------------------------ATTCGATATAAGCC--A-TAAATACTAATCGTAGAA------A-ACGGGTCCCAAA--A---------GAGACCGAAT-TGAGCCAGTT--T---T-GGGGTGGT-ATT---ATTGC------------ATTGAA----------------------------CC--------GGAACAATGCCGGATA-TTTGCTCATT-ACATTTTG-----------------------------TGTG---G------------------CATTC-T--TTTTTATCTTTTAATTAAGCC--ATCAA----G---CGGGAAGTGAAAT--------TCT--CTTT
droRho1 scf7180000779336:54998-55255 - TACGATAAACTAAAGCCACAGAGCGTCGTTTGCGTTAACTACGTCATAAGGTGAGTCAAT-CAGA---------TTTC--AT---------------AT-TTCCTATATA------------------AATAG------------------------------------TA-CATA-ACTAATCGTAGAA---------CGGGTCTCAAA--G----------AGACCGAAT-TGAGCCAATT--T-----GGGGCGGG-ATT---ATTGC------------ATTGAA----------------------------CC--------GGAACAATGCCGGATA-TTTGCTCATT-ACATTTTG-----------------------------CGTG---GAA----------------ATTTCGT--TTTTTATCTTTTAATTAAGCCC-GTCAA----G---CGGGAAGTGAAAT--------TCT--CTTT
droFic1 scf7180000454073:3432406-3432662 - TACGACAAACTAAAGCCACAGAGTGTCGTGTGCGTTAACTACGTCATAAGGTGAGTCAGT-CAGA---------GTCC--AT---------------AT-ATCCT---------------------------------------------ATATACTA-CTATA-----TATTATATGCTAATCGTAGAA---------CGGGTCCCGAA--G----------AGCCCGAGT-TGAGCCAATT--T-----GGGGCGCG-ATT----TCCT------------ATTGAA----------------------------AC--------GGAACAATCCCGGATA-TTTGCTCATT-ACTT--T------------------------------TGGG---GAA-------------------------TTTTTATCTTTTAATTAAGCC--GCCAA----G---CGGGAAGTGAA-TTC-TC--TTTATACTTT
droKik1 scf7180000302261:354169-354399 + TATGATAAATTAAAGCCACAGAGCGTCGTTTGCGTTAACTACGTGATAAGGTGAGTCATT-TGCA---------GTTC--AT---------------AT-ATTT-------------------------------------------------TC---------------C-TTAATACTAACCGTAGAATAA-TGATGGGGGTCCCAAA--G----------AGTCCGAAT-TGAGCTGGAA--T---A-AGGGTGGG-ATT----TTT---------------G--G----------------------------GG--------GAAACAATGCCGGATA-TTTGCTCATT-ACAT----------------------------------------------------------------------TTTATCTTTTAATTAAGCT--GCTAA----G---CGGAAAGTGAAAT--------TCT--CTTC
droAna3 scaffold_13340:20897391-20897622 + TACGATAAGTTGAAGCCACAGAGCGTTGTTTGTGTCAACTACGTCATAAGGTGAGTCAGT-CAGA---------TTTA--AT-------------------TCCTAGTA--------------------CTAGTAAC-----------TAACTCACT-------------C-CCT-------CCG-------------AGGAGTCTCGAT--A----------AGTCCGAAT-TGAGCC----------------------------------------------------------------------------------------GGAACAATGCCGGATA-TTTGCTAATT-ACACTGAC-----------------------------TGGGAGGGTA---T---TG-------CCTTC-T--TTTTTATCTTTTAATTAAGCC--ATCAA---CGT--GGGGAAGTGAAAT--------TCT--CTTT
droBip1 scf7180000396413:1506811-1507033 - TACGATAAGCTGAAGCCACAGAGCGTCGTTTGCGTCAACTACGTCATAAGGTGAGTCAGT-CAGA---------TTTA--AT---------------T---TC----------------------------------------------------------------------TTATACTAACAAT-----------------TACCAAG--AGTACTTGATAAGTCCGAAT-TGAGCC----------------------------------------------------------------------------------------GGAACAATGCCGGATA-TTTGCTCATT-ACATCTC------------------------------TGGG--GGTA---T---TG-------CCTTC-G--TTTTTATCTTTTAATTAAGCC--GTCAA---CGA--GGGGAAGTGAATTTCTACC--A-T--TATT
dp5 2:1017458-1017714 + TACGACAAGCAGAAGCCCCAGAGCGTCGTCTGCGTGAACTACGTCATCAGGTGAGTCG-T-C-G-----------TTC--AA---------------GTAATT-C------------------AA--GA-----------------------ATT---------------C-TCTGTACTAACCGTAGAATTTTCAA-TTGGGTATTGAGTCG----------AGTCCGAAT-TGAGCCACTT--GGATTGGGGATTGG-ATT----TTGG------------GTG--G----------------------------GC--------GAAACAATGCCGGATA-TTTGCTCATT-ACATATTG------------------------------GGG---GTG---GG---G-------GGCAC-G--TTTTTATCTTTTAATTAAGCC--GCAAA--------CG-GAAGCCA------------CT--GCTC
droPer2 scaffold_7:3803604-3803855 + TACGACAAGCAGAAGCCCCAGAGCGTCGTCTGCGTGAACTACGTCATAAGGTGAGTCG-T-C-G-----------TTC--AA---------------GTAATT-C------------------AA--AA-----------------------ATA---------------C-TCTGTACTAACCGTAGAATTTTCAA-TTGGGTATTGAGTCG----------AGTCCGAAT-TGAGCCACTA--G-----GGGATTGG-ATT----TTGG------------ATG--G----------------------------GC--------GAAACAATGCCGGATA-TTTGCTCATT-ACATATTG------------------------------GGG---GAG---GG---G-------GGCAC-G--TTTTTATCTTTTAATTAAGCC--GCAAA--------CG-GAAGCC------------GCT--GCTC
droWil2 scf2_1100000004943:5326289-5326559 + dwi_3277 CTCGACAAGCTAAAGCCTCAGAGTGTTGTCTGTGTGAATTACGTAATAAGGTGAGTCAGA-AATGTT-T------TTC--CT------------------TTCTTTTTTT---------GCTA------CTAACAATCAATCCAT------------------------------TTAATAATTAAGTAAA-----T-GTTTCTATTAAC--G----------AGTCCGAAT-TGAGCTGCTT--A------GGATGAG-GA--------A------------AAC--GAAAATAAACCTAAGACCTGATTAAAGACAACCAAAAACG---AAATGCCAAATA-TTTGCTTATT-ACATACCA------------------------------TAG--CATAATAAT---A-------A-TCA-C--TTTTTATCTTTTAATTAA------------------------------------------------
droVir3 scaffold_12855:3510209-3510446 + TACGATAAGCTAAAGCCGCAGAGCGTTGTCTGCGTTAATTATGTCATTAGGTGAGTTCAATC-GT-T-TGACAG-------T-------------------TTCTATCT-----------CAA------CTAAC--------------CAATATAGTC-TTGTA-----AGT--TA---------------------------TATTAAT--G----------AGCCTGAAT-TGAGCTGAGG------------------A--------A------------ATC--G----------------------------GC--------CAAACAATGCCAAATA-TTTGCTCATTTACAAAGT------------------------------CGAA--GGCG--------G-------TTCGC-G--TTTTTATCATTTAATTAAACGCTGCCTAAAG-G---CG----G--TAAT--------TTG--CATT
droMoj3 scaffold_6540:7814078-7814316 + TACGATAAGCTAAAGCCGCAGAGCGTTGTCTGCGTTAATTATGTCATCAGGTGAGTCGAT-TCGT-TACGACAG-------T-------------------TTTT---CT---------ACAA------CTAACTAAACACCCATATCGTATATATAGAGTATA----------------AGTTAT------------GAGACTATTAAT--G----------AGCCTAAATGTGAGCTGCCC--------------------------------------------------------------------------GT--------ATAACAATGCCAAATA-TTTGCTCATG-TCTAAGTGCGCCTT------------------------------GAA----------------------T--TTTGCGTGCTTTTATTAAATG--A------------TG------GTAAT--------TTG--TGTT
droGri2 scaffold_14906:6192686-6192992 + TACGATAAGCTAAAGCCACAGAGTGTTGTGTGCGTCAATTATGTCATCAGGTGAGTCGAC-TCGT-T-TGACAG-------TTTTACTAACTACTATGT-GGCCTATATAAGTATATAA----ATATAT-----------------------ATA--------------TA-TATATACTTGCCATGCCA---------------TTAAT--G----------AGTCTGAAT-TGAGCTGCTG--T---T--------------------A------------ACTGGC----------------------------AG--------CAAACAATGCCAAATA-TTTGCTCATT-ACACGCTGCGGACTGACGCAGAATAGGTGGATATATACGGG--GGCA---G-TTTGTTTTCAGCATTA-T--TTTTTATCTTTTAATTAAATGCTGCTGA-AG-A---CG------GTAAT--------TTG--CGGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TACGATAAGTTAAAGCCGCAGAGCGTCGTTTGCGTTAACTACGTCATAAGGTGAGTCATT-CAGA---------TTTCCAAT---------------AT-AT----------------------------------------------------A--------------TA-TATATACTAACCGTAGAAC----AA-ACGGGTCCCAAG--A----------AGACCGAAT-TGAGCCATTTCTT---T--GGGCGGG-ATA----TTCC------------AATGAA----------------------------GC--------GGAACAATGCCGGATA-TTTGCTCATT-ACATTTT------------------------------TGGG--CGAG----------------------T--TTTTTATCTTTTAATTAAGCC--ACCAA----GTGGCAGGAAGTGAAAT--------TCG--TATTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................AATGCCGGATA-TTTGCTCATT-AC........................................................................................................................................2314.00400400000000000000
...........AAAGCCGCAGAGCGTCGTTTGCGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00300300000000000000
..........TAAAGCCGCAGAGCGTCGTTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00201010000000000000
TACGATAAGTTAAAGCCGCAGAGCGTCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
.......AGTTAAAGCCGCAGAGCGTCGTTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
...........................................................................................................................................................................................................................................................................TTCC------------AATGAA----------------------------GC--------GGAACAATGCCGGAT.......................................................................................................................................................2711.00100100000000000000
.ACGATAAGTTAAAGCCGCAGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000100000
........................................................................................................................................................................................................................................................................................................................................................................TT------------------------------TGGG--CGAG----------------------T--TTTTTATC..........................................................1911.00100000100000000000
.....................................................................................................................................................................................................................................................T---T--GGGCGGG-ATA----TTCC------------AATGAA----------------------------GC--------GGAA..................................................................................................................................................................2811.00100000010000000000
droSec2
TACGATAAGCTAAAGCCGCAGAGCGTCGTTTGCGTTAACTACGTCATAAGGTGAGTCATT-CAGA---------TTTCCAAT---------------AT-----------------------------------------------------------------------A-TATATACTAACCGTAGAAC----AA-ACGGGTCCCAAG--A----------AGACCGAAT-TGAGCAATTTCAT---T--GGGCGGG-ATA----TTCC------------AATGAA----------------------------GC--------GGAACAATGCCGGATA-TTTGCTCATT-ACATTTT------------------------------TGGG--CGAG----------------------T--TTTTTATCTTTTAATTAAGCC--ACCAA----GTGGCAGGAAGTGAAAT--------TCG--TATTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...GATAAGCTAAAGCCGCAGAGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
...........AAAGCCGCAGAGCGTCGTTTGCGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
...............................................................................................................................................................................................................AAG--A----------AGACCGAAT-TGAGC...............................................................................................................................................................................................................................................................1811.0010010
..........TAAAGCCGCAGAGCGTCGTTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
.................GCAGAGCGTCGTTTGCGTTAACTACGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
.....TAAGCTAAAGCCGCAGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
dm3
TACGATAAGTTAAAGCCGCAGAGCGTCGTTTGCGTTAACTATGTCATAAGGTGAGTCAGT-CAGA---------TTTCCAAT---------------AT-AT--------------------------------------------------ATA--------------TA-TATATACTAACCGTAGAACAA-CAA-ACGGGTCCCAAA--G---------AATACCGAAT-TGAGCCATTTCAC---T--GGGCGGG-ATT----TTCA------------ATTGGC----------------------------GC--------GGAACAATGCCGGATA-TATGCTCATT-ACATTTT------------------------------TGGG--CAAG----------------------TTAATTTTATCATTTAATTAAGCC--ACCAA----A---CAGGAAGTGAAATTC-----TTCG--TATTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........TAAAGCCGCAGAGCGTCGTTTGCGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................26110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000
TACGATAAGTTAAAGCCGCAGAGCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
....................................................................................................................................................................................AACCGTAGAACAA-CAA-AC.....................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TAAGTTAAAGCCGCAGAGCGTCGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TAAAGCCGCAGAGCGTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TAAAGCCGCAGAGCGTCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TT------------------------------TGGG--CAAG----------------------TTAATTTTATC..........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................GCGTCGTTTGCGTTAACTATGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CGCAGAGCGTCGTTTGCGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................AACAA-CAA-ACGGGTCCCAAC--.........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AGCCGCAGAGCGTCGTTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........AAAGCCGCAGAGCGTCGTTTGCGTTAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ATAAGTTAAAGCCGCAGAGCGTCGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AAGTTAAAGCCGCAGAGCGTCGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................GGC----------------------------GC--------GGAACAATGCCGGATA-T....................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TTTGCGTTAACTATGTCATAAGGTGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CATT-ACATTTT------------------------------TGGG--CAAG----------------------TT...................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TCA------------ATTGGC----------------------------GC--------GGAACAATGCCGGAT.......................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACGATAAGTTAAAGCCGCAGAGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
........GTTAAAGCCGCAGAGCGTCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGCGTTAACTATGTCATAAGGTGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................................CATTTT------------------------------TGGG--CAAG----------------------TTAATTTTATC..........................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................CGCAGAGCGTCGTTTGCGTTAACTATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..............................TGCGTTAACTATGTCATAAGTAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TATGTCATAAGGTGAGTCAGT-CAGA---------...................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........AAAGCCGCAGAGCGTCGTTTGCGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AAAGCCGCAGAGCGTCGTTTGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..................................................................................................................................................................................................................................................................G-ATT----TTCA------------ATTGGC----------------------------GC--------GGA...................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.........TTAAAGCCGCAGAGCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TT----TTCA------------ATTGGC----------------------------GC--------GGAACAATGCCGGA........................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AAAGCCGCAGAGCGTCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TTTCAC---T--GGGCGGG-ATT----TTCA------------ATTGGC----------------------------................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................ACTATGTCATAAGGTGAGTCAGT-CAGA---------...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................T-AT--------------------------------------------------ATA--------------TA-TATATACTAACCGTAGAAC..............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTAAAGCCGCAGAGCGTCGTTTGCGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............AGCCGCAGAGCGTCGTTTGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................T-ACATTTT------------------------------TGGG--CAAG----------------------TT...................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TACGATAAGCTGAAGCCGCAGAGCGTCGTTTGCGTTAACTACGTCATCAGGTGAGTCAGT-CAGA---------TGTCCAAT---------------AT-ATC-C------------------AT--GT-----------------------ATC------------C--A-TATATACTAACCGTAGAAC-----A-ACGGGTCCCAAA--G----------ACACCGAAT-TGAGCCATTTTAT---T--GGGCGGG-T--------CCCTTGAA----CTTTTGAT----------------------------GC--------GGAACAATGCCGGATA-TTTGCTCATT-ACATTTT------------------------------CGGG---GAG----------------------T--TTTTTATCTATTAATTAAGCC--ACCAA----G---CAGGAAGTGAATT--------TCT--TATTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................CCAAA--G----------ACACCGAAT-TGAGCC..............................................................................................................................................................................................................................................................2111.0010100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAGCC--ACCAA----G---CAGGAAGTGA....................2411.0010000100
.............................................................................................................................................................................................................CCAAA--G----------ACACCGAAT-TGAGC...............................................................................................................................................................................................................................................................2011.0010100000
...................................................................................................................................................................................................................................................................................................................................................................ACATTTT------------------------------CGGG---GAG----------------------T--TTTT..............................................................1911.0010000100
.................................GTTAACTACGTCATCAGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
............................................................................................................................................................................................................CCCAAA--G----------ACACCGAAT-TGAG................................................................................................................................................................................................................................................................2011.0010000010
....................................................................................................................................................................................AACCGTAGAAC-----A-ACGGGTCCC..............................................................................................................................................................................................................................................................................................2111.0010100000
droYak3
TACGATAAGCTGAAGCCACAGAGCGTCGTTTGCGTGAACTACGTCATAAGGTGAGTCAGT-CAGA---------TTTCCAAT---------------AT-ATC-T------------------AT--AT-----------------------ATA-----------CTATA-TATATACTAACTGTAGAAC-----A-ACGGGTCCCAAG--G----------AGACCGAAT-TGAGCTATTATAT---T--GGGCGGG-TTTTCTTTTCC------------ATTGAA----------------------------GC--------GGAACAATGCCGGATA-TTTGCTCATA-ACATTTT------------------------------CGGC---GAG----------------------T--TTTTTATCTTTTAATTAAGCC--ACCAA----G---CAGGAAGTGAATT--------TCG--TATTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............GCCACAGAGCGTCGTTTGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000020000
.ACGATAAGCTGAAGCCACAGAGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...GATAAGCTGAAGCCACAGAGCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAAGCC--ACCAA----G---CAGGA.........................2011.00100000010000
...GATAAGCTGAAGCCACAGAGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.................ACAGAGCGTCGTTTGCGTGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.................................GTGAACTACGTCATAAGGTGAGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..........................................................................................................................................................................................................GTCCCAAG--G----------AGACCGAAT-T...................................................................................................................................................................................................................................................................1911.00101000000000
..CGATAAGCTGAAGCCACAGAGCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.................ACAGAGCGTCGTTTGCGTGAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...............................................................................................................................................................................ATACTAACTGTAGAAC-----A-ACGG...................................................................................................................................................................................................................................................................................................2111.00100000010000
...GATAAGCTGAAGCCACAGAGCGTCGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
...........GAAGCCACAGAGCGTCGTTTGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
droEug1
TACGACAAGCTAAAGCCGCAGAGCGTTGTCTGCGTTAACTACGTCATAAGGTGAGTCAGT-CAGA---------TTTC--AT---------------AT-ACTTT------------------AT--------------------ATCG--------------------TA-TATATACTAATCGCAGAAG-----A-ACGGGTCC------G----------AGACCGAAT-TGAGCCAACT--T-----GGGGCGGG-ATT----TTCT------------ATTGAA----------------------------CC--------GGAACAATGCCGGATA-TTTGCTCATT-ACAATTC---------------------------------------G----------------------T--TTTTTATCTTTTAATTAGGCC--GCCAA----G---CGGGAAGTGAAAT--------TCC--CTTTSizeHit CountTotal NormTotal
No Reads
droBia1
TATGATAAACTGAAGCCCCAGAGCGTCGTTTGCGTCAACTACGTCATAAGGTGAGTCAGT-CAGA---------TACC--AG---------------AT-ACCAGATTT-----------TAG------CT--------------ATCCTATGTA-----------CCATGT--TTTACTAACCGTAGAAA-----C-GCGGGTCCCAAA--G----------AGACCGAAT-TGAGCCAATT--G-----GGGGCGGG-ACT----TTGG-----GTTTTCTATTGAA----------------------------CC--------GGAACAATGCCGGATA-TTTGCTCATT-ACACTTTT-----------------------------CGGG---GGG-----------------AC-T-C--TTTTTATCTTTTAATTAAGCC--ACCAA----G---CGGGAAGTGAAATTC-ACAATTCC--CTTTSizeHit CountTotal NormTotal
No Reads
droTak1
TATGATAAACTAAAGCCACAGAGTGTCGTTTGCGTGAACTACGTCATAAGGTGAGTCAGT-CAGA---------TCTCTATTTT-------------TT-ACCCT---------------------------------------------ATATA-----------CCATAT--TATACTAATTGTAGAAG----CA-ACGGGTCCCGAA--A----------AGACCGAAT-TGAGCCAATT--T---T--AGGTAGAAATT----TTCG-----ATTTTCTATGGAA----------------------------CC--------GGAACAATGCCGGATAATTTGCTCATT-ACATTTATTTTTT------------------------TGGG--GGAA--------------------T-T--TTTTTATCTTTTAATTAAGCC--ACCAA----G---CGGGAAGTGAAAT--------TCT--CTTTSizeHit CountTotal NormTotal
No Reads
droEle1
TACGATAAACTAAAGCCACAGAGCGTTGTTTGCGTTAACTACGTCATAAGGTGAGTCAGT-CAGA---------TTTC--AT---------------AT-AT----------------------------------------------------ATTCGATATAAGCC--A-TAAATACTAATCGTAGAA------A-ACGGGTCCCAAA--A---------GAGACCGAAT-TGAGCCAGTT--T---T-GGGGTGGT-ATT---ATTGC------------ATTGAA----------------------------CC--------GGAACAATGCCGGATA-TTTGCTCATT-ACATTTTG-----------------------------TGTG---G------------------CATTC-T--TTTTTATCTTTTAATTAAGCC--ATCAA----G---CGGGAAGTGAAAT--------TCT--CTTTSizeHit CountTotal NormTotal
No Reads
droRho1
TACGATAAACTAAAGCCACAGAGCGTCGTTTGCGTTAACTACGTCATAAGGTGAGTCAAT-CAGA---------TTTC--AT---------------AT-TTCCTATATA------------------AATAG------------------------------------TA-CATA-ACTAATCGTAGAA---------CGGGTCTCAAA--G----------AGACCGAAT-TGAGCCAATT--T-----GGGGCGGG-ATT---ATTGC------------ATTGAA----------------------------CC--------GGAACAATGCCGGATA-TTTGCTCATT-ACATTTTG-----------------------------CGTG---GAA----------------ATTTCGT--TTTTTATCTTTTAATTAAGCCC-GTCAA----G---CGGGAAGTGAAAT--------TCT--CTTTSizeHit CountTotal NormTotal
No Reads
droFic1
TACGACAAACTAAAGCCACAGAGTGTCGTGTGCGTTAACTACGTCATAAGGTGAGTCAGT-CAGA---------GTCC--AT---------------AT-ATCCT---------------------------------------------ATATACTA-CTATA-----TATTATATGCTAATCGTAGAA---------CGGGTCCCGAA--G----------AGCCCGAGT-TGAGCCAATT--T-----GGGGCGCG-ATT----TCCT------------ATTGAA----------------------------AC--------GGAACAATCCCGGATA-TTTGCTCATT-ACTT--T------------------------------TGGG---GAA-------------------------TTTTTATCTTTTAATTAAGCC--GCCAA----G---CGGGAAGTGAA-TTC-TC--TTTATACTTTSizeHit CountTotal NormTotal
No Reads
droKik1
TATGATAAATTAAAGCCACAGAGCGTCGTTTGCGTTAACTACGTGATAAGGTGAGTCATT-TGCA---------GTTC--AT---------------AT-ATTT-------------------------------------------------TC---------------C-TTAATACTAACCGTAGAATAA-TGATGGGGGTCCCAAA--G----------AGTCCGAAT-TGAGCTGGAA--T---A-AGGGTGGG-ATT----TTT---------------G--G----------------------------GG--------GAAACAATGCCGGATA-TTTGCTCATT-ACAT----------------------------------------------------------------------TTTATCTTTTAATTAAGCT--GCTAA----G---CGGAAAGTGAAAT--------TCT--CTTCSizeHit CountTotal NormTotal
No Reads
droAna3
TACGATAAGTTGAAGCCACAGAGCGTTGTTTGTGTCAACTACGTCATAAGGTGAGTCAGT-CAGA---------TTTA--AT-------------------TCCTAGTA--------------------CTAGTAAC-----------TAACTCACT-------------C-CCT-------CCG-------------AGGAGTCTCGAT--A----------AGTCCGAAT-TGAGCC----------------------------------------------------------------------------------------GGAACAATGCCGGATA-TTTGCTAATT-ACACTGAC-----------------------------TGGGAGGGTA---T---TG-------CCTTC-T--TTTTTATCTTTTAATTAAGCC--ATCAA---CGT--GGGGAAGTGAAAT--------TCT--CTTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........GAAGCCACAGAGCGTTGTTTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002011000
...................AGAGCGTTGTTTGTGTCAACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.................................................................................................................................................................................................................T--A----------AGTCCGAAT-TGAGCC----------------------------------------------------------------------------------------GGA...................................................................................................................................................................2011.001010000
.............AGCCACAGAGCGTTGTTTGTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
...................AGAGCGTTGTTTGTGTCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
..........................TGTTTGTGTCAACTACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...............................................................................................................................................................................................................................................................................................................................................................ATT-ACACTGAC-----------------------------TGGGAGG..............................................................................................1811.001100000
....ATAAGTTGAAGCCACAGAGCGTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
.............................TTGTGTCAACTACGTCATAAGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...........GAAGCCACAGAGCGTTGTTTGTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
.....TAAGTTGAAGCCACAGAGCGTTGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
...GATAAGTTGAAGCCACAGAGCGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
droBip1
TACGATAAGCTGAAGCCACAGAGCGTCGTTTGCGTCAACTACGTCATAAGGTGAGTCAGT-CAGA---------TTTA--AT---------------T---TC----------------------------------------------------------------------TTATACTAACAAT-----------------TACCAAG--AGTACTTGATAAGTCCGAAT-TGAGCC----------------------------------------------------------------------------------------GGAACAATGCCGGATA-TTTGCTCATT-ACATCTC------------------------------TGGG--GGTA---T---TG-------CCTTC-G--TTTTTATCTTTTAATTAAGCC--GTCAA---CGA--GGGGAAGTGAATTTCTACC--A-T--TATTSizeHit CountTotal NormTotal
No Reads
dp5
TACGACAAGCAGAAGCCCCAGAGCGTCGTCTGCGTGAACTACGTCATCAGGTGAGTCG-T-C-G-----------TTC--AA---------------GTAATT-C------------------AA--GA-----------------------ATT---------------C-TCTGTACTAACCGTAGAATTTTCAA-TTGGGTATTGAGTCG----------AGTCCGAAT-TGAGCCACTT--GGATTGGGGATTGG-ATT----TTGG------------GTG--G----------------------------GC--------GAAACAATGCCGGATA-TTTGCTCATT-ACATATTG------------------------------GGG---GTG---GG---G-------GGCAC-G--TTTTTATCTTTTAATTAAGCC--GCAAA--------CG-GAAGCCA------------CT--GCTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................CAATGCCGGATA-TTTGCT...............................................................................................................................................1811.0010000100000
.............AGCCCCAGAGCGTCGTCTGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.................................................................................................GTAATT-C------------------AA--GA-----------------------ATT---------------C-TCT..............................................................................................................................................................................................................................................................................................................................1811.0010100000000
droPer2
TACGACAAGCAGAAGCCCCAGAGCGTCGTCTGCGTGAACTACGTCATAAGGTGAGTCG-T-C-G-----------TTC--AA---------------GTAATT-C------------------AA--AA-----------------------ATA---------------C-TCTGTACTAACCGTAGAATTTTCAA-TTGGGTATTGAGTCG----------AGTCCGAAT-TGAGCCACTA--G-----GGGATTGG-ATT----TTGG------------ATG--G----------------------------GC--------GAAACAATGCCGGATA-TTTGCTCATT-ACATATTG------------------------------GGG---GAG---GG---G-------GGCAC-G--TTTTTATCTTTTAATTAAGCC--GCAAA--------CG-GAAGCC------------GCT--GCTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............AGCCCCAGAGCGTCGTCTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003300000
.......AGCAGAAGCCCCAGAGCGTCGTCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.003300000
................CCCAGAGCGTCGTCTGCGTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003300000
........................................................................................................C------------------AA--AA-----------------------ATA---------------C-TCTGTACTAACC.....................................................................................................................................................................................................................................................................................................................2113.003300000
.............AGCCCCAGAGCGTCGTCTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.............................................................................................................................................................................................................................................................GATTGG-ATT----TTGG------------ATG--G----------------------------GC--------GA....................................................................................................................................................................2111.001001000
............AAGCCCCAGAGCGTCGTCTGCGTGAACTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
...................................GAACTACGTCATAAGGTGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...........................GTCTGCGTGAACTACGTCATAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
................CCCAGAGCGTCGTCTGCGTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..........AGAAGCCCCAGAGCGTCGTCTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
........................................................................................................................................................................................GTAGAATTTTCAA-TTGGGT.................................................................................................................................................................................................................................................................................................1911.001100000
..........AGAAGCCCCAGAGCGTCGTCTGCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.......................................................................................................................................................................................................................................................................................................................................GAAACAATGCCGGATA-TTTGCTC..............................................................................................................................................2311.001100000
..............................................................................................................................................................................................................................................................ATTGG-ATT----TTGG------------ATG--G----------------------------GC--------......................................................................................................................................................................1811.001100000
droWil2
CTCGACAAGCTAAAGCCTCAGAGTGTTGTCTGTGTGAATTACGTAATAAGGTGAGTCAGA-AATGTT-T------TTC--CT------------------TTCTTTTTTT---------GCTA------CTAACAATCAATCCAT------------------------------TTAATAATTAAGTAAA-----T-GTTTCTATTAAC--G----------AGTCCGAAT-TGAGCTGCTT--A------GGATGAG-GA--------A------------AAC--GAAAATAAACCTAAGACCTGATTAAAGACAACCAAAAACG---AAATGCCAAATA-TTTGCTTATT-ACATACCA------------------------------TAG--CATAATAAT---A-------A-TCA-C--TTTTTATCTTTTAATTAA------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........AAAGCCTCAGAGTGTTGTCTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00300030
............................................................................................................................................................................................AAA-----T-GTTTCTATTAAC--G----------AGTCCGA.......................................................................................................................................................................................................................................................................2412.00200020
...GACAAGCTAAAGCCTCAGAGTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200020
......................................................................................................................................................................................................................................AT-TGAGCTGCTT--A------GGATGA...........................................................................................................................................................................................................................................1912.00200200
........GCTAAAGCCTCAGAGTGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...................................................................................................................................................................................................................................CGAAT-TGAGCTGCTT--A------GGATGA...........................................................................................................................................................................................................................................2211.00100010
.....CAAGCTAAAGCCTCAGAGTGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
.......................................................................................................................................................................................................................................................................................................AACCTAAGACCTGATTAAAGAC................................................................................................................................................................................2211.00100100
...............................................................................................................................................................................................................................AGTCCGAAT-TGAGCTGCTT--A------GG...............................................................................................................................................................................................................................................2211.00100100
............................................................................................................................................................................................................ATTAAC--G----------AGTCCGAAT-TGAGC...............................................................................................................................................................................................................................................................2111.00100001
................................TGTGAATTACGTAATAAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
............................................................................................................................................................................................................................................GCTGCTT--A------GGATGAG-GA--------A------------..................................................................................................................................................................................................................1811.00100010
...GACAAGCTAAAGCCTCAGAGTGTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
....................................................................................................................................................................................................................................GAAT-TGAGCTGCTT--A------GGATGAG-.........................................................................................................................................................................................................................................2211.00100100
......................................................................................................................................................................................................................................................................................................AAACCTAAGACCTGATTAAAGAC................................................................................................................................................................................2311.00110000
..............................................................................................................................................................................................................................................................................A------------AAC--GAAAATAAACCTAAGACCT..........................................................................................................................................................................................2311.00100010
........................GTTGTCTGTGTGAATTACGTAATAAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
......AAGCTAAAGCCTCAGAGTGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..................CAGAGTGTTGTCTGTGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..........................TGTCTGTGTGAATTACGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
.........CTAAAGCCTCAGAGTGTTGTCTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.......AGCTAAAGCCTCAGAGTGTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
droVir3
TACGATAAGCTAAAGCCGCAGAGCGTTGTCTGCGTTAATTATGTCATTAGGTGAGTTCAATC-GT-T-TGACAG-------T-------------------TTCTATCT-----------CAA------CTAAC--------------CAATATAGTC-TTGTA-----AGT--TA---------------------------TATTAAT--G----------AGCCTGAAT-TGAGCTGAGG------------------A--------A------------ATC--G----------------------------GC--------CAAACAATGCCAAATA-TTTGCTCATTTACAAAGT------------------------------CGAA--GGCG--------G-------TTCGC-G--TTTTTATCATTTAATTAAACGCTGCCTAAAG-G---CG----G--TAAT--------TTG--CATTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......AAGCTAAAGCCGCAGAGCGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................ATTTACAAAGT------------------------------CGAA--GGCG--------G-------TTCGC-.....................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................AT-TGAGCTGAGG------------------A--------A------------ATC--G----------------------------GC--------CAA...................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................G--TTTTTATCATTTAATTAAACGCT...........................................2411.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................GCCTGAAT-TGAGCTGAGG------------------A--------A------------ATC--G----------------------------GC--------C.....................................................................................................................................................................2711.001000000000000000100000000000000000000000000000000000000000000000
........GCTAAAGCCGCAGAGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAACGCTGCCTAAAG-G---C.............................1911.001000100000000000000000000000000000000000000000000000000000000000
....ATAAGCTAAAGCCGCAGAGCGTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000001000000000000000000000000000000000000000000000000000
.......AGCTAAAGCCGCAGAGCGTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................A---------------------------TATTAAT--G----------AGCCTGAAT-TG..................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000010000000000000000000000000
......AAGCTAAAGCCGCAGAGCGTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................G----------AGCCTGAAT-TGAGCTGAGG------------------A--------...............................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TACAAAGT------------------------------CGAA--GGCG--------G-------TTCGC-G--T.................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TACGATAAGCTAAAGCCGCAGAGCGTTGTCTGCGTTAATTATGTCATCAGGTGAGTCGAT-TCGT-TACGACAG-------T-------------------TTTT---CT---------ACAA------CTAACTAAACACCCATATCGTATATATAGAGTATA----------------AGTTAT------------GAGACTATTAAT--G----------AGCCTAAATGTGAGCTGCCC--------------------------------------------------------------------------GT--------ATAACAATGCCAAATA-TTTGCTCATG-TCTAAGTGCGCCTT------------------------------GAA----------------------T--TTTGCGTGCTTTTATTAAATG--A------------TG------GTAAT--------TTG--TGTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................GTTAATTATGTCATCAGGTGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000002
....................................................................................................................................ACTAAACACCCATATCGTAT.....................................................................................................................................................................................................................................................................................................................................................2012.002200000
....ATAAGCTAAAGCCGCAGAGCGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.....................................................................................................................................................................................GTTAT------------GAGACTATTAAT--G----------AGC...........................................................................................................................................................................................................................................................................2111.001000001
droGri2
TACGATAAGCTAAAGCCACAGAGTGTTGTGTGCGTCAATTATGTCATCAGGTGAGTCGAC-TCGT-T-TGACAG-------TTTTACTAACTACTATGT-GGCCTATATAAGTATATAA----ATATAT-----------------------ATA--------------TA-TATATACTTGCCATGCCA---------------TTAAT--G----------AGTCTGAAT-TGAGCTGCTG--T---T--------------------A------------ACTGGC----------------------------AG--------CAAACAATGCCAAATA-TTTGCTCATT-ACACGCTGCGGACTGACGCAGAATAGGTGGATATATACGGG--GGCA---G-TTTGTTTTCAGCATTA-T--TTTTTATCTTTTAATTAAATGCTGCTGA-AG-A---CG------GTAAT--------TTG--CGGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................ATCAGGTGAGTCGAC-TCGT-T-TG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110

Generated: 05/19/2015 at 03:36 PM