ID:dsi_27750 |
Coordinate:3l:11516617-11516731 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -6.6 | -6.6 | -6.4 |
 |
 |
 |
five_prime_UTR [3l_11516732_11516782_-]; five_prime_UTR [3l_11515945_11516616_-]; exon [3l_11514846_11516616_-]; exon [3l_11516732_11516782_-]; intron [3l_11516617_11516731_-]; five_prime_UTR [3l_11516381_11516706_-]; exon [3l_11516357_11516706_-]
No Repeatable elements found
| ##################################################-------------------------############################################################################################################################################ TTAGTATACCAGCCCTGGAACTGCGGCTTTGTTTGTAGCCGAGAATATTGGTATTAAAATTTGCACTTCATCTCTCTAAAATATATATATGCAACTAGTTAGTTAATGTCTGTCTGAAGATTCTGTTGATTATAGGCTTCCTTCTATTTCTTCTTTACCTTTTAGGTGACATCATAGTGGCCCGTTCAAGAGAGGCAAAGAGAAACTCTCTTGCG *****************************************************************************.................(((..((((((((((((......))))...))))))))))).......************************************************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
M023 head |
GSM343915 embryo |
M025 embryo |
O001 Testis |
SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................TCTGTTGATTATAGGCTTCCT......................................................................... | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........GCCCTGGAACTGCGGCTTT......................................................................................................................................................................................... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................................................................CTTCTTTACCTTTTAGGTGAC............................................. | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................................................................TCTGTTGATTATAGGCTTTCT......................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................AACTGCGGCTGTGTTTGT................................................................................................................................................................................... | 18 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................AAAATATATATATGCAAC........................................................................................................................ | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...................................................................................................................................................................TGGTGACATCATAGTGGCCCGTTC............................ | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................ATTCTGTTGATTATAGGCC............................................................................. | 19 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................AGTTAATGTCTGTCTGAAGATTCTG.......................................................................................... | 25 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .................................................................................................................................................................TTAGGTGACATCATAGTG.................................... | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .....................................................................................................................................................................GTGACATCGTAGTGGCCCGTT............................. | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .....................................................................................................................................................................................CCGTTCAAGAGAGGC................... | 15 | 0 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................GATTCTGTTGATTAGAGC............................................................................... | 18 | 2 | 5 | 0.40 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................ATTGTACTTCATCTCTCT.......................................................................................................................................... | 18 | 2 | 6 | 0.17 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................................TCTGAAGATTGTGTTCAGTA................................................................................... | 20 | 3 | 12 | 0.08 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................TGTCTCTAAAATATATATATA............................................................................................................................ | 21 | 2 | 13 | 0.08 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| ....TATACAAGCCCTGGGA................................................................................................................................................................................................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ..........................................................................................................TGGCTGTCTGAAGATA............................................................................................. | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
|
AATCATATGGTCGGGACCTTGACGCCGAAACAAACATCGGCTCTTATAACCATAATTTTAAACGTGAAGTAGAGAGATTTTATATATATACGTTGATCAATCAATTACAGACAGACTTCTAAGACAACTAATATCCGAAGGAAGATAAAGAAGAAATGGAAAATCCACTGTAGTATCACCGGGCAAGTTCTCTCCGTTTCTCTTTGAGAGAACGC
*************************************************************************.................(((..((((((((((((......))))...))))))))))).......***************************************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M024 male body |
SRR902009 testis |
SRR553488 RT_0-2 hours eggs |
GSM343915 embryo |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................AAGGAAGATAATGATGAAAGGGA....................................................... | 23 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| .....................................................................................................................................TCCGAAGGAAGATAAAGAAGA............................................................. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................................................................ATCACAGGGCAAGTTCTCTCC.................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| AATCATATGGTCGGGACCTTG.................................................................................................................................................................................................. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...................................................................................................................................................AGGAGGCAATGGAAAATCC................................................. | 19 | 3 | 11 | 0.09 | 1 | 0 | 0 | 1 | 0 | 0 |
| .....................................................................................................................................................GAGGCAATGGAAAATCC................................................. | 17 | 2 | 18 | 0.06 | 1 | 0 | 0 | 1 | 0 | 0 |
| ...............................................................................................................................................AATAAAGAAGAAATGGAAGGT................................................... | 21 | 3 | 19 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 |
| ......ATGCTCGAGATCTTGACG............................................................................................................................................................................................... | 18 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 |
| .......................................................................................................................................................................................................CTGCTTGAGAGAACGC | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
Generated: 04/24/2015 at 10:24 AM