ID:

dsi_27678

 Coordinate:

3r:19300140-19300289 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.52 -11.2 -11.0

Flybase annnotation

CDS [3r_19300290_19300494_-]; exon [3r_19300290_19300494_-]; intron [3r_19299886_19300289_-]

Repeatable elements

NameClassFamilyStrand
(TAGA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CGGTCGCCTGACCTTCAAGTATGAGCGCGAGTCCAACTACCATCTGCTCGGTAAGTTTATATCACTATTATTATCCAGAACAATAGGCTCTTGAAGGCACTTGCTCCTCATCTCTCTATCTATCGATCTATCTATCTATCTATCTGAATAAGTATACTTTGGCCCATTGATCATGCCATCTCATTGATCGGTTTATGGATTAGTTATGCTATTTATTTTAGAAAACACAAAACTTATCAGAATAGCGCTT
***********************************************************************....((((.((((.((((...((((..(((((.((.......................................)).)))))...)))))))).)))).)).))...************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 M025
embryo
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 O002
Head
.............TTCAAGTATGAGCGCGAGTCCAAC..................................................................................................................................................................................................................... 24 0 1 5.00 5 3 0 0 0 0 0 0 2 0 0 0
............CTTCAAGTATGAGCGCGAGTCCAAC..................................................................................................................................................................................................................... 25 0 1 4.00 4 3 0 0 0 0 0 0 0 1 0 0
........TGACCTTCAAGTATGAGCGCGAGT.......................................................................................................................................................................................................................... 24 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GTTATGCTAGTTATT................................. 15 1 19 2.63 50 0 50 0 0 0 0 0 0 0 0 0
.....................TGAGCGCGAGTCCAACTACCATCTGC........................................................................................................................................................................................................... 26 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
.............TTCAAGTATGAGCGCGAGTCCAACTACC................................................................................................................................................................................................................. 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
........TGACCTTCAAGTATGAGCGT.............................................................................................................................................................................................................................. 20 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
..........ACCTTCAAGTATGAGCGCGAGTCCAACT.................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............TTCAAGTATGAGCGCGAGTCA........................................................................................................................................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.....................TGAGCGCGAGTCCAACTACCATCTGCT.......................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
CGGTCGCCTGACCTTCAAGTATGAGCGC.............................................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................TATGAGCGCGAGTCCAACTACCATC.............................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.............TTCAAGTATGAGCGCGAGTCCAA...................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..........................GCGAGTCCAACTACCATCT............................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................TTGGCCCATTGATCATGCCA........................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
.........GACCTTCAAGTATGAGCGCGAGT.......................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................GTCCAACTACCATCTGCTCGAAT..................................................................................................................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..................GTATGAGCGCGAGTCCAACT.................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....................TGAGCGCGAGTCCAACTACCATCT............................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................TGAATAAGTATACTTTGGCCCA.................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.............TTCAAGTATGAGCGCGAGAA......................................................................................................................................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................ACCATCTGCTCGGTAAGT.................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
..............................GTCCAACTACCATCTGCTCGCCG..................................................................................................................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..........ACCTTCAAGTATGAGCGCGAGTCCAAC..................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TAAGTATACTTTGACCCATTGATCA............................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................GTCCAACTACCATCTGCTCG........................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................TATCCAGAACAATAGGCTCTTGAAGGCACT..................................................................................................................................................... 30 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
....................ATGAGCGCGAGTCCCACTACCATCTGCT.......................................................................................................................................................................................................... 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..................GTATGAGCGCGAGTCCAAC..................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............................GTCCAACTACCATCTGCTCGCCT..................................................................................................................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
CGGTCGCCTGACCTTCAAGTATGAGCG............................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........TGACCTTCAAGTATGAGCGCGAGTCCAACT.................................................................................................................................................................................................................... 30 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................CTATCTATCTATCTATCTGA....................................................................................................... 20 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
....................................CTACCATCTGCTGGATAA.................................................................................................................................................................................................... 18 2 15 0.13 2 0 0 0 0 0 0 0 0 2 0 0
...........................................................................................................................................................................................TCGGTTTATGGATTCTTTATT.......................................... 21 3 11 0.09 1 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................................................................GGCCCATGGATTATGCC......................................................................... 17 2 19 0.05 1 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GCCAGCGGACTGGAAGTTCATACTCGCGCTCAGGTTGATGGTAGACGAGCCATTCAAATATAGTGATAATAATAGGTCTTGTTATCCGAGAACTTCCGTGAACGAGGAGTAGAGAGATAGATAGCTAGATAGATAGATAGATAGACTTATTCATATGAAACCGGGTAACTAGTACGGTAGAGTAACTAGCCAAATACCTAATCAATACGATAAATAAAATCTTTTGTGTTTTGAATAGTCTTATCGCGAA
************************************************************************....((((.((((.((((...((((..(((((.((.......................................)).)))))...)))))))).)))).)).))...*********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total O002
Head
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 O001
Testis
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
...........................................................................................................................GCTAGATAGATAGATAGATAGA......................................................................................................... 22 0 4 1.75 7 7 0 0 0 0 0 0 0 0 0
............................................................................................CTTGGGTGAACCAGGAGTAGA......................................................................................................................................... 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............AGTTCATACTCGCGCTCA.......................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.......................TCGCGCTCAGGTTGATGGTAG.............................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................AGATAGGCTTGTTCATATGGA........................................................................................... 21 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...........................................................................GTCTTGTTATCCGAGAAC............................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................GCTCAGGTTGATGGTAGA............................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..............................CAGGTTGATGGTAGCCGCG......................................................................................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0
................................GGTTGATGGTAGCCG........................................................................................................................................................................................................... 15 1 16 0.19 3 0 0 1 2 0 0 0 0 0 0
............................TTTAGGTTGATGGTAGCCG........................................................................................................................................................................................................... 19 3 20 0.15 3 0 0 0 0 0 0 0 3 0 0
................................................................................GGTCTCCGAGAACTTCAGTG...................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 1
..............................................................................................................AGAGAGATATATAGC............................................................................................................................. 15 1 16 0.13 2 0 0 0 0 0 0 0 2 0 0
..................................................................................................................................................................CGGTAACTAGTACAGTAG...................................................................... 18 2 9 0.11 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................AGCTAGATAGATCGATAGATA........................................................................................................... 21 1 9 0.11 1 0 0 0 0 0 0 0 0 1 0
..................CCTACTCGTGCTCCGGTTGAT................................................................................................................................................................................................................... 21 3 10 0.10 1 0 1 0 0 0 0 0 0 0 0
......................CTGGCGGTCAGTTTGATGG................................................................................................................................................................................................................. 19 3 10 0.10 1 0 0 1 0 0 0 0 0 0 0
...................................TGATAGTAGACTAGCCA...................................................................................................................................................................................................... 17 2 15 0.07 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TAGCACGCTAGAGTACCTA.............................................................. 19 3 16 0.06 1 0 0 0 0 0 0 0 0 1 0
.......................................................................................................................................................................................................AAGCAATACGATCAATAA................................. 18 2 16 0.06 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CAATACGATCAATAA................................. 15 1 19 0.05 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................AGCAATACGATCAATAA................................. 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GCAATACGATCAATAA................................. 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0
.............................TCAGGTTGATTGTAGC............................................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:19300090-19300339 - dsi_27678 CGGTCGCCTGACCTTCAAGTATGAGCGCGAGTCCAACTACCATCTGCTCGGTAAGTT----TA-TATC----------ACTATTATTATC------------CAG-----------------------------------------------------------------------------------------A--AC--AA--TAGGCTCTTGAAGGCACT-TGCTCCTCATCTCTCTA--TCTATCGATCTATC-----------------------------------------------------------TATCTA----TCTATCTGAATAAGT-----------ATACTTTGGCCCATTGAT--CATGCCATCTCATT--------------GATCGGTTTATGGA-TTA---GTTATGCTATTTATTTTA-GAAA---ACAC----------------------------------------------------------AA-----AACTTAT----CAGAATAGC--------------GCTT
droSec2 scaffold_0:20104696-20104924 - CGGTCGCCTGACCTTCAAGTATGAGCGCGAATCCAACTACCATCTGCTCGGTAAGTT----TA-TATC----------ACTATTATTATC------------CAA-----------------------------------------------------------------------------------------A--AC--AATCCAGGCTCTTGAAGGCACT-TGCTCCTCATCTCTCTA--TCTA-----------------------------------------------------------------------CCTA----TCTATCTGAATAAGT-----------ATACTTTGGCCCATTGAT--CATGCCATCTCATT--------------GATCGGTTTAT---------------GCTATTTATTTTA-GAAA---ACAC----------------------------------------------------------AA-----AACCTAT----CAGAATAGC--------------GCTT
dm3 chr3R:19762948-19763194 - CGGTCGCCTGACCTTCAAGTATGAGCGCGAGTCCAACTACCATCTGCTTGGTAAGTT----TA-TCAC----------ACTATTATTATG------------CAA-----------------------------------------------------------------------------------------A--AC--AA--TAGGCTCTTGAAGGCACT-TGCTCCTCATCTCGTTA--TCTATCAATC---------------------------------------------------------------TATCTA----TCTATCTGAATAAGT-----------ATACTTTGGCCCATTGAT--CATGCCATCTCATT--------------GATTGGTTTATGGATTTA---GTTATGCTATTTATTTTA-GAAA---ACAC----------------------------------------------------------AA-----AACCTAT----TAGAAAAGC--------------GCTT
droEre2 scaffold_4820:8294781-8295002 + CGGTCGCCTGACCTTCAAGTATGAGCGCGAGTCCAACTACCATCTGCTCGGTAAGTTATATTA-TATC----------ACTATTATTATC------------CAG-----------------------------------------------------------------------------------------A--AT--AA--TAGGCTCTCGAAGGCACT-TTCTACTCATCTCTCTA--TCTACCG-------------------------------------------------------------------AACTA----TCTATCGAAATAAGT-----------TTATTTTGGCCCATTGAT--CAT------------------------------------GGA-TAA---GTTATGCTATTTATTTTA-GTAA---A--C----------------------------------------------------------AA-----AACCT-T---TCAGAATAGC--------------GCTT
droYak3 3R:26739650-26739896 + CGGTCGCCTGACCTTCAAGTACGAGCGCGAGTCCAACTACCATCTGCTCGGTAAGTTA------TGTC----------ATTATTATTATA------------CAG-----------------------------------------------------------------------------------------A--AC--AA--TGGGCTCTTGAAGGCACT-TGCTCCTCATCTCTCTATCTCTATCTATC---------------------------------------------------------------GATCTA----TCTATCTAAATAAGT-----------ATAGTTTGGCCCATTGAT--CATGCCATCTCATT--------------GATCGGTTTACGGA-TAA---GTTATGCTATTTATTTTA-GAAA---ACAC----------------------------------------------------------AA-----AACCTAT----CAGAATAGC--------------GCTT
droEug1 scf7180000409798:632627-632846 + CGGTCGCCTGACCTTCAAGTACGAACGCGAGTCCAACTACCATCTGCTCGGTAAGTTA------TATC----------ACTATTTAATTC------------TAA-----------------------------------------------------------------------------------------G--AC--AA--TAGGCTCTTGAAGGCACT-TGCTCCTCATCTCTCTA--TCAA-----------------------------------------------------------------------TCTAT----CTA-------------------------TTTCGGTTCATTGAT--CATGCCATCTCATT--------------GAACG-------GA-TTA---TTTATGCTAT--AATTAA-GAAA---ATAT----------------------------------------------------------AAAAAAAAACCTGT---ACAGAATAGC--------------GCTT
droBia1 scf7180000302136:97711-97924 - CGGTCGCCTGACCTTCAAGTACGAGCGCGAGTCCAACTACCATCTGCTCGGTAAGTAA------TATC----------CCTAGGCTTAGC------------CAG-------------------------------------------------------------------------------------GAAAA--AC--AG--TAGGCTC----------T-TGCTCCTCATCTCTCTA--C--------------------------------------------------------------------------TCTAT----CTA-------------------C-----TTTCGGCTCATTGAT--CATGCCATCTCATT--------------GATCGGTTTACGGA-TTA---CTTAAGCTAT--TATTTA-GAGA---ATCA----------------------------------------------------------AA-----AACCTGT---ACAGAATAGC--------------GCTT
droTak1 scf7180000415183:81342-81571 + CGGTCGCCTGACCTTCAAGTATGAGCGCGAGTCCAACTACCATCTGCTCGGTAAGTTA------TATCGATATAACATAGTACTATATCT------------TAA-----------------------------------------------------------------------------------------A--AC--AG--TAGGCTCTTGAAGGCACC-TGCTCCTCATCTCTCTT--TCTT--------------------------------------------------------------------------TT----CTA-------------------C-----TTTCGGCTCATTGAT--CATGCCATTTCATA--------------GATCGGTTTATGGA-TTA---CTTAAGCTAT--AATTTA-GAGA---ACAC----------------------------------------------------------AA-----AACCTGT---ACAGAATAGC--------------GCTT
droEle1 scf7180000491008:55659-55879 - CGGTCGTCTGACCTTCAAGTATGAGCGCGAGTCCAACTACCATCTGCTCGGTAAGTTA------CATC----------AGTTTTGTACTT------------TAA-----------------------------------------------------------------------------------------A--AG--CA--TAGGCTCTTGAAGGCACTTTGCTCCTCATCTGT--A--TCCA-----------------------------------------------------------------------TCTAT----TTA-------------------------TTTCTGCTCATTGAT--CGTGCCATCTCATT--------------GATCGGTTTATGGA-TTA---CTTATGCTAT--AATTTA-GAGA---ATAC----------------------------------------------------------AA-----AACCCGT---ACAGAATAGC--------------GAAT
droRho1 scf7180000779169:143886-144115 + CGGTCGTCTGACTTTCAAGTATGAGCGCGAGTCCAACTACCATCTGCTCGGTAAGTTA------TATC----------ACTATTACTCTT------------TGA-----------------------------------------------------------------------------------------A--AC--AA--TAAGCTCTTGAAG-CACTTTGCTCCTCATCTCTCTA--TCTATCTATC---------------------------------------------------------------TATCTAT----CTA-------------------------TTTTGGCTCATTGAT--CATACCATATCATT--------------GATCGGTTTATGGA-TTA---CTTATGCTAT--AATTTA-TGAA---ATAC----------------------------------------------------------CA-----AACCCGT---ACAGAATAGC--------------GCTT
droFic1 scf7180000453800:1935532-1935757 - CGGTCGCCTGACCTTCAAGTACGAGCGCGAGTCCAACTACCATCTGCTCGGTAAGTTA------TGCT----------AACTTTATAA-C------------TAA-----------------------------------------------------------------------------------------A--ATAAGA-TTAGGCTCTTGAAGGCACT-TGCTCCTCATCTCTCTA--TCTA-----------------------------------------------------------------------TTTAT----TTA-------------------------TTTCTGCTCATTGAT--CATGCCATCTCATT--------------AATAGGTTTATGGA-TTG---ATTATGCTAT--AATTAAAAAGA---ACAC---------------------------------------------------------CAA-----AACCCGT---ACAGAAAAGC--------------GCTT
droKik1 scf7180000302778:149687-149900 - CGGTCGCCTGACCTTCAAGTATGAGCGCGAGTCCAACTACCACCTGCTCGGTAAGTTC----TATATC----------CGTATTCTTTAC------------C------------------------------------------------------------------------------------------------------------------TTC--T-CT------ATC----TA--TCTTTCCATCTATC-----------------------------------------------------------TATCTAT----CTT-------------------------TCTCGGCTCATTGATCTCATGCCATTTCATT--------------AATCGGTTTATGGAATTAATTCTTATGCTAT--GATTTA-GAAA---ATAC----------------------------------------------------------GA-----AACCCGAGACAAAGAATAGC--------------GCTT
droAna3 scaffold_13340:7797959-7798178 + CGGTCGCCTGACCTTCAAGTACGAGCGCGAGTCCAACTACCATCTGCTCGGTGAGTT----TCGAATC-----------GTACTCTAA-C------------TAA-----------------------------------------------------------------------------------------T--AT--GA--TAGGCTCTTGAAGGCACT-TGCTCCTCATAAATA------TTTCA-----------------------------------------------------------------------AT----CTA-------------------------TCTCTGCTCATTGAT--CATGCCACTTCATTA--------CT---GATCGGTTTATGGA-TTA---ATTATGCTAT--AATTTA-GAAA---ATAC----------------------------------------------------------A------AACCCGT---ACAGAATAGC--------------GTTT
droBip1 scf7180000396708:1049916-1050141 - CGGTCGCCTGACCTTCAAGTACGAGCGCGAGTCCAACTACCATCTGCTCGGTATGTTT----CAAATC-----------GAATTCTT--C------------CAA-----------------------------------------------------------------------------------------ACTAC--TA--TAGGCTCTTGAAGGCACT-TGCTCCTCATAAAACTA--TCTT-----------------------------------------------------------------------TCTAT----CTA-------------------------TCTCTGCTCATTGAT--CATGCCACTTCATTA--------CT---GATCGGTTTATGGA-TTA---ATTATGCTAT--AATTTA-GAAA---ATAC----------------------------------------------------------AA-----AACCCGT---ACAGAATAGC--------------GTTT
dp5 2:14263924-14264106 - CGGTCGCCTGACCTTCAAGTACGAACGCGAGTCCAACTATCATTTGCTCGGTAAGTC----TC---------------------------------------------------------------------------------------------------------------------------------------------------------------T-CGTTCTATA------------TTTTGATCTATCTATTGATCAGCTATTCATTTGCCATTC----TGCTCGCCGTCTATCTATAATC--------TC--------------------------------------------------------------TATC--------------TATCGGTTTATGGT-T-T---CTTATGCT--------------------------------------------------------------------------------AA-----AACCTTT---ACAGAATAGC--------------CTTT
droPer2 scaffold_0:6176033-6176215 + CGGTCGCCTGACCTTCAAGTACGAGCGCGAGTCCAACTATCATTTGCTCGGTAAGTC----TC---------------------------------------------------------------------------------------------------------------------------------------------------------------T-CGTTCTATA------------TTTCGATCCATCTATTGATCAGCTATTCATTTGCCATTC----TGCTCGTCATCTATCTATAATC--------TC--------------------------------------------------------------TATC--------------TATCGGTTTATGGT-T-T---CTTATGCT--------------------------------------------------------------------------------AA-----AACCTTT---ACAGAATAGC--------------CTTT
droWil2 scf2_1100000004902:1132128-1132354 + CGGTCGCTTGACCTTCAAGTATGAACGTGAATCCAACTACCATTTGCTCGGTAAGTTG----A--ATAAG---------AAAATCTT--T------------------------------------------------------------------------------------------------------------C--AA--ATGGTTCTTA---GCACT------------------------------------------------------------CTTTGCGCTCGAAATC----------------------------------------------------------------ACAAAAT--CATTTCATCTTTT--ATAAT---TT---AAAAGGTTTTCGGT-T----------------CATTTAA-AAAA---ACAA--AA---ATCTTAGTTTCTTATACAGTAAGTTCTTAATATCAAA-------------CAA-----AAGTCTG---AGAGAACAGC--------------TTGA
droVir3 scaffold_13047:8271988-8272238 + CGGTCGTCTGACCTTCAAGTATGAGCGCGAGTCCAACTATCATCTGCTCGGTAAGTTA----G--TCG----------AGTTCC----------------------------------------------------------------------------------------------------------------------A---------TAGAGAACGCT-AAC------------TA--TCTT---------------------------------------------------------------------TAACTA----TCTATCTAAATACGTAG----------TAC-ATATACGATCAAT--CATGCCATCTCATTTACAATTCATT---TAAGGGTATATGGT-TT----TTAA------------------AATTG--TATAA---TTATTTATTGTATATATATTATGTCATTTAACTTAAGCCAGTTG------CAA-----AACCCTC---ACAGAAAAGC--------------GGCT
droMoj3 scaffold_6540:27919109-27919447 - CGGTCGCCTGACCTTCAAATATGAGCGCGAATCCAACTATCATCTGCTCGGTAAGTTG----T--TAG----------GGTCTTTATTTATATAGGCTTAGGCG-CACCATCTGCAGTTTCTGCGCACACTATCTACCTATATAGCTATTTATCTTATTTATCTATCCATATATCTATCTTACATATAAGAATAT--AT--CA--TAG---------------------------------------------------------------------------------------------------------------------------------------------------GCTTGTACGTTTCAT--CATGCCATTTCATTTGAATTTCATT---TAAGGGTATATGGT-TTT---CTAA------------------AATTC--TATTA---TTATTTGTT----ATATTTTATATCTATTAACTCGGGCTAGTTGTCCCAGCCA-----AACC-AT---GTAGAAAAGCAACTGCTCGGCTCGGCTT
droGri2 scaffold_15074:1337834-1338076 - CGGTCGCCTGACTTTCAAGTATGAGCGCGAGTCCAACTACCATTTGCTCGGTAAGTT----TG---------------AGT------------------------------------------------------------------------------------------------------------------------------------TT-----------------------------------------------AAGAGTTATTCACA-----------------------TATCTACAATCATTATCTATATATATATATAC--------G--GTATATAGCTATGGCTTGTACTATCAAT--CATGCCACATCATTTACAACTCACTTAATAAGGGTATATGGT-T-A---CAA-------------------AATTA--TTTAATGATTATTTAT------------------------------CAGTTGCAACAGAAA-----ATCCCTT---ACAGAAAAGC--------------GGTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGGTCGCCTGACCTTCAAGTATGAGCGCGAGTCCAACTACCATCTGCTCGGTAAGTT----TA-TATC----------ACTATTATTATC------------CAG-----------------------------------------------------------------------------------------A--AC--AA--TAGGCTCTTGAAGGCACT-TGCTCCTCATCTCTCTA--TCTATCGATCTATC-----------------------------------------------------------TATCTA----TCTATCTGAATAAGT-----------ATACTTTGGCCCATTGAT--CATGCCATCTCATT--------------GATCGGTTTATGGA-TTA---GTTATGCTATTTATTTTA-GAAA---ACAC----------------------------------------------------------AA-----AACTTAT----CAGAATAGC--------------GCTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............TTCAAGTATGAGCGCGAGTCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.00500000003200000000
............CTTCAAGTATGAGCGCGAGTCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.00400000003010000000
........TGACCTTCAAGTATGAGCGCGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00300000003000000000
.....................TGAGCGCGAGTCCAACTACCATCTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000001001000000
.............TTCAAGTATGAGCGCGAGTCCAACTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
........TGACCTTCAAGTATGAGCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
..........ACCTTCAAGTATGAGCGCGAGTCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000001000000
.............TTCAAGTATGAGCGCGAGTCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.....................TGAGCGCGAGTCCAACTACCATCTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
CGGTCGCCTGACCTTCAAGTATGAGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000001000000
...................TATGAGCGCGAGTCCAACTACCATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
.............TTCAAGTATGAGCGCGAGTCCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000000000
..........................GCGAGTCCAACTACCATCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................TTGGCCCATTGAT--CATGCCA...............................................................................................................................................................................2011.00100001000000000000
.........GACCTTCAAGTATGAGCGCGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000100000
..............................GTCCAACTACCATCTGCTCGAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
..................GTATGAGCGCGAGTCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
.....................TGAGCGCGAGTCCAACTACCATCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000100000
............................................................................................................................................................................................................................................................................................................................................TGAATAAGT-----------ATACTTTGGCCCA.............................................................................................................................................................................................2211.00100000000000001000
.............TTCAAGTATGAGCGCGAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
......................................ACCATCTGCTCGGTAAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
..............................GTCCAACTACCATCTGCTCGCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
..........ACCTTCAAGTATGAGCGCGAGTCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
..............................GTCCAACTACCATCTGCTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
......................................................................................TATC------------CAG-----------------------------------------------------------------------------------------A--AC--AA--TAGGCTCTTGAAGGCACT-..........................................................................................................................................................................................................................................................................................................................................3011.00100000010000000000
..................GTATGAGCGCGAGTCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
..............................GTCCAACTACCATCTGCTCGCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
CGGTCGCCTGACCTTCAAGTATGAGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
........TGACCTTCAAGTATGAGCGCGAGTCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000000000
............................................................................................................................................................................................................................................................CTATC-----------------------------------------------------------TATCTA----TCTATCTGA...........................................................................................................................................................................................................................2020.50100100000000000000
droSec2
CGGTCGCCTGACCTTCAAGTATGAGCGCGAATCCAACTACCATCTGCTCGGTAAGTT----TA-TATC----------ACTATTATTATC------------CAA-----------------------------------------------------------------------------------------A--AC--AATCCAGGCTCTTGAAGGCACT-TGCTCCTCATCTCTCTA--TCTA-----------------------------------------------------------------------CCTA----TCTATCTGAATAAGT-----------ATACTTTGGCCCATTGAT--CATGCCATCTCATT--------------GATCGGTTTAT---------------GCTATTTATTTTA-GAAA---ACAC----------------------------------------------------------AA-----AACCTAT----CAGAATAGC--------------GCTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....CGCCTGACCTTCAAGTATGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2217.0070061
....CGCCTGACCTTCAAGTATGAGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030030
....................ATGAGCGCGAATCCAACTACCAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020200
....CGCCTGACCTTCAAGTATGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020020
.................................................................................................................................................................................................................CTCTTGAAGGCACT-TGCTCCT...................................................................................................................................................................................................................................................................................................................................2111.0011000
.........GACCTTCAAGTATGAGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................CATCTCATT--------------GATCGGTTTAT---------------GC..............................................................................................................................2211.0010010
........TGACCTTCAAGTATGAGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.........GACCTTCAAGTATGAGCGCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...............CAAGTATGAGCGCGAATCCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
..............................ATCCAACTACCATCTGCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
............CTTCAAGTATGAGCGCGAATCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
....CGCCTGACCTTCAAGTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.........GACCTTCAAGTATGAGCGCGAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
........TGACCTTCAAGTATGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
..............................ATCCAACTACCATCTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.............TTCAAGTATGAGCGCGAATCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
................................CCAACTACCATCTGCTCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5011000
dm3
CGGTCGCCTGACCTTCAAGTATGAGCGCGAGTCCAACTACCATCTGCTTGGTAAGTT----TA-TCAC----------ACTATTATTATG------------CAA-----------------------------------------------------------------------------------------A--AC--AA--TAGGCTCTTGAAGGCACT-TGCTCCTCATCTCGTTA--TCTATCAATC---------------------------------------------------------------TATCTA----TCTATCTGAATAAGT-----------ATACTTTGGCCCATTGAT--CATGCCATCTCATT--------------GATTGGTTTATGGATTTA---GTTATGCTATTTATTTTA-GAAA---ACAC----------------------------------------------------------AA-----AACCTAT----TAGAAAAGC--------------GCTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................AAGTATGAGCGCGAGTCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22119.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000054801000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....CGCCTGACCTTCAAGTATGAGCGCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100080000000000000000800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TATGAGCGCGAGTCCAACTACCATCTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................AGTATGAGCGCGAGTCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1818.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000100000
....CGCCTGACCTTCAAGTATGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2217.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................CATCTCATT--------------GATTGGTTTATG..............................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CCTTCAAGTATGAGCGCGAGTCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000
................AAGTATGAGCGCGAGTCCAACTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGCCTGACCTTCAAGTATGAGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CAAGTATGAGCGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............CAAGTATGAGCGCGAGTCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGAGCGCGAGTCCAACTACCATCTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000200000
....CGCCTGACCTTCAAGTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CGAGTCCAACTACCATCTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000100000000000000000000000
.........GACCTTCAAGTATGAGCGCGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000
.....................TGAGCGCGAGTCCAACTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGTATGAGCGCGAGTCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000100000000
...........CCTTCAAGTATGAGCGCGAGTCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GACCTTCAAGTATGAGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGAGCGCGAGTCCAACTACCATCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATGAGCGCGAGTCCAACTACCATCTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........GACCTTCAAGTATGAGCGCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGTATGAGCGCGAGTCCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GTATGAGCGCGAGTCCAACTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTCAAGTATGAGCGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..............TCAAGTATGAGCGCGAGTCCAACTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000
....CGCCTGACCTTCAAGTATGAGCGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................GTATGAGCGCGAGTCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................ATGAGCGCGAGTCCAACTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGTATGAGCGCGAGTCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-----AACCTAT----TAGAAAAGC--------------GCT.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
................AAGTATGAGCGCGAGTCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000
.............TTCAAGTATGAGCGCGAGTCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GTCGCCTGACCTTCAAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GTATGAGCGCGAGTCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
...................TATGAGCGCGAGTCCAACTACCATCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CTTCAAGTATGAGCGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............CTTCAAGTATGAGCGCGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TCAAGTATGAGCGCGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GAGCGCGAGTCCAACTACCAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTTATGGATTTA---GTTATG...............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
...................TATGAGCGCGAGTCCAACTACCATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GTCCAACTACCATCTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TGACCTTCAAGTATGAGCGCGAGTCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................GATTGGTTTATGGATTTA---GT...................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................AGTATGAGCGCGAGTCCAACTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GCGCGAGTCCAACTACCATCTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGCCTGACCTTCAAGTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTAT----TAGAAAAGC--------------GCTT1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...............CAAGTATGAGCGCGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GACCTTCAAGTATGAGCGCGAGTCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CGGTCGCCTGACCTTCAAGTATGAGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................TGAGCGCGAGTCCAACTACCATCTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ACCTTCAAGTATGAGCGCGAGTCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.......................AGCGCGAGTCCAACTACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AAGTATGAGCGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................TATGAGCGCGAGTCCAACTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...................TATGAGCGCGAGTCCAACTACCATCTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGGATTTA---GTTATGCTATTT.........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................ATCTA----TCTATCTGAATAAG......................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CCAACTACCATCTGCTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTCAAGTATGAGCGCGAGTCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TCAAGTATGAGCGCGAGTCCAACTACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................CATCTCATT--------------GATTGGTTTATT..............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GTATGAGCGCGAGTCCAACTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..GTCGCCTGACCTTCAAGTATGAGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTCAAGTATGAGCGCGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TATGAGCGCGAGTCCAACTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGTATGAGCGCGAGTCCAACTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CTTCAAGTATGAGCGCGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GT-----------ATACTTTGGCCCATTGAT--C.....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................T--------------GATTGGTTTATGGATTT.........................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GAGCGCGAGTCCAACTACCATCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AAGTATGAGCGCGAGTCCAACTACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........CCTTCAAGTATGAGCGCGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................AAGTATGAGCGCGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGAGCGCGAGTCCAACTACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CGGTCGCCTGACCTTCAAGTATGAGCGCGAGTCCAACTACCATCTGCTCGGTAAGTTATATTA-TATC----------ACTATTATTATC------------CAG-----------------------------------------------------------------------------------------A--AT--AA--TAGGCTCTCGAAGGCACT-TTCTACTCATCTCTCTA--TCTACCG-------------------------------------------------------------------AACTA----TCTATCGAAATAAGT-----------TTATTTTGGCCCATTGAT--CAT------------------------------------GGA-TAA---GTTATGCTATTTATTTTA-GTAA---A--C----------------------------------------------------------AA-----AACCT-T---TCAGAATAGC--------------GCTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....CGCCTGACCTTCAAGTATGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020101000
...................TATGAGCGCGAGTCCAACTACCAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0021001000
.GGTCGCCTGACCTTCAAGTATGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
............CTTCAAGTATGAGCGCGAGTCCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
.....................TGAGCGCGAGTCCAACTACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.............................AGTCCAACTACCATCTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
...................................................................................................................................................................................................................................................................................................................................................GT-----------TTATTTTGGCCCATTGAT--CAT------------------------------------GGA-...........................................................................................................................................2611.0010100000
..........ACCTTCAAGTATGAGCGCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
............CTTCAAGTATGAGCGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
....................ATGAGCGCGAGTCCAACTACCATCTGCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
....CGCCTGACCTTCAAGTATGAGCGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
....CGCCTGACCTTCAAGTATGAGCGCGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000
..................GTATGAGCGCGAGTCCAACTACCAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
.........GACCTTCAAGTATGAGCGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
..........................GCGAGTCCAACTACCATCTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
.........................CGCGAGTCCAACTACCATCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
.................................CAACTACCATCTGCTCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001000
droYak3
CGGTCGCCTGACCTTCAAGTACGAGCGCGAGTCCAACTACCATCTGCTCGGTAAGTTA------TGTC----------ATTATTATTATA------------CAG-----------------------------------------------------------------------------------------A--AC--AA--TGGGCTCTTGAAGGCACT-TGCTCCTCATCTCTCTATCTCTATCTATC---------------------------------------------------------------GATCTA----TCTATCTAAATAAGT-----------ATAGTTTGGCCCATTGAT--CATGCCATCTCATT--------------GATCGGTTTACGGA-TAA---GTTATGCTATTTATTTTA-GAAA---ACAC----------------------------------------------------------AA-----AACCTAT----CAGAATAGC--------------GCTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............CTTCAAGTACGAGCGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2215.00501400000000
...........CCTTCAAGTACGAGCGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00300100020000
...............CAAGTACGAGCGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200110000000
.........GACCTTCAAGTACGAGCGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00201100000000
............CTTCAAGTACGAGCGCGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000
..............TCAAGTACGAGCGCGAGTCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...........CCTTCAAGTACGAGCGCGAGTCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
.......CTGACCTTCAAGTACGAGCGCGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100001000000
............CTTCAAGTACGAGCGCGAGTCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
..................GTACGAGCGCGAGTCCAACTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
..........................................................................................................................................................................................................A--TGGGCTCTTGAAGGCACT-TGC.......................................................................................................................................................................................................................................................................................................................................2211.00100000100000
...........CCTTCAAGTACGAGCGCGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
.................AGTACGAGCGCGAGTCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TTACGGA-TAA---GTTATGCT.............................................................................................................................1811.00100010000000
..................................AACTACCATCTGCTCGGTAAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
.............................AGTCCAACTACCATCTGCTCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.........GACCTTCAAGTACGAGCGCGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
............................GAGTCCAACTACCATCTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
..........................GCGAGTCCAACTACCATCTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000
................AAGTACGAGCGCGAGTCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
................................CCAACTACCATCTGCTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000
...............CAAGTACGAGCGCGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
.........GACCTTCAAGTACGAGCGCGAGTCCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
..............TCAAGTACGAGCGCGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
droEug1
CGGTCGCCTGACCTTCAAGTACGAACGCGAGTCCAACTACCATCTGCTCGGTAAGTTA------TATC----------ACTATTTAATTC------------TAA-----------------------------------------------------------------------------------------G--AC--AA--TAGGCTCTTGAAGGCACT-TGCTCCTCATCTCTCTA--TCAA-----------------------------------------------------------------------TCTAT----CTA-------------------------TTTCGGTTCATTGAT--CATGCCATCTCATT--------------GAACG-------GA-TTA---TTTATGCTAT--AATTAA-GAAA---ATAT----------------------------------------------------------AAAAAAAAACCTGT---ACAGAATAGC--------------GCTTSizeHit CountTotal NormTotal
No Reads
droBia1
CGGTCGCCTGACCTTCAAGTACGAGCGCGAGTCCAACTACCATCTGCTCGGTAAGTAA------TATC----------CCTAGGCTTAGC------------CAG-------------------------------------------------------------------------------------GAAAA--AC--AG--TAGGCTC----------T-TGCTCCTCATCTCTCTA--C--------------------------------------------------------------------------TCTAT----CTA-------------------C-----TTTCGGCTCATTGAT--CATGCCATCTCATT--------------GATCGGTTTACGGA-TTA---CTTAAGCTAT--TATTTA-GAGA---ATCA----------------------------------------------------------AA-----AACCTGT---ACAGAATAGC--------------GCTTSizeHit CountTotal NormTotal
No Reads
droTak1
CGGTCGCCTGACCTTCAAGTATGAGCGCGAGTCCAACTACCATCTGCTCGGTAAGTTA------TATCGATATAACATAGTACTATATCT------------TAA-----------------------------------------------------------------------------------------A--AC--AG--TAGGCTCTTGAAGGCACC-TGCTCCTCATCTCTCTT--TCTT--------------------------------------------------------------------------TT----CTA-------------------C-----TTTCGGCTCATTGAT--CATGCCATTTCATA--------------GATCGGTTTATGGA-TTA---CTTAAGCTAT--AATTTA-GAGA---ACAC----------------------------------------------------------AA-----AACCTGT---ACAGAATAGC--------------GCTTSizeHit CountTotal NormTotal
No Reads
droEle1
CGGTCGTCTGACCTTCAAGTATGAGCGCGAGTCCAACTACCATCTGCTCGGTAAGTTA------CATC----------AGTTTTGTACTT------------TAA-----------------------------------------------------------------------------------------A--AG--CA--TAGGCTCTTGAAGGCACTTTGCTCCTCATCTGT--A--TCCA-----------------------------------------------------------------------TCTAT----TTA-------------------------TTTCTGCTCATTGAT--CGTGCCATCTCATT--------------GATCGGTTTATGGA-TTA---CTTATGCTAT--AATTTA-GAGA---ATAC----------------------------------------------------------AA-----AACCCGT---ACAGAATAGC--------------GAATSizeHit CountTotal NormTotal
No Reads
droRho1
CGGTCGTCTGACTTTCAAGTATGAGCGCGAGTCCAACTACCATCTGCTCGGTAAGTTA------TATC----------ACTATTACTCTT------------TGA-----------------------------------------------------------------------------------------A--AC--AA--TAAGCTCTTGAAG-CACTTTGCTCCTCATCTCTCTA--TCTATCTATC---------------------------------------------------------------TATCTAT----CTA-------------------------TTTTGGCTCATTGAT--CATACCATATCATT--------------GATCGGTTTATGGA-TTA---CTTATGCTAT--AATTTA-TGAA---ATAC----------------------------------------------------------CA-----AACCCGT---ACAGAATAGC--------------GCTTSizeHit CountTotal NormTotal
No Reads
droFic1
CGGTCGCCTGACCTTCAAGTACGAGCGCGAGTCCAACTACCATCTGCTCGGTAAGTTA------TGCT----------AACTTTATAA-C------------TAA-----------------------------------------------------------------------------------------A--ATAAGA-TTAGGCTCTTGAAGGCACT-TGCTCCTCATCTCTCTA--TCTA-----------------------------------------------------------------------TTTAT----TTA-------------------------TTTCTGCTCATTGAT--CATGCCATCTCATT--------------AATAGGTTTATGGA-TTG---ATTATGCTAT--AATTAAAAAGA---ACAC---------------------------------------------------------CAA-----AACCCGT---ACAGAAAAGC--------------GCTTSizeHit CountTotal NormTotal
No Reads
droKik1
CGGTCGCCTGACCTTCAAGTATGAGCGCGAGTCCAACTACCACCTGCTCGGTAAGTTC----TATATC----------CGTATTCTTTAC------------C------------------------------------------------------------------------------------------------------------------TTC--T-CT------ATC----TA--TCTTTCCATCTATC-----------------------------------------------------------TATCTAT----CTT-------------------------TCTCGGCTCATTGATCTCATGCCATTTCATT--------------AATCGGTTTATGGAATTAATTCTTATGCTAT--GATTTA-GAAA---ATAC----------------------------------------------------------GA-----AACCCGAGACAAAGAATAGC--------------GCTTSizeHit CountTotal NormTotal
No Reads
droAna3
CGGTCGCCTGACCTTCAAGTACGAGCGCGAGTCCAACTACCATCTGCTCGGTGAGTT----TCGAATC-----------GTACTCTAA-C------------TAA-----------------------------------------------------------------------------------------T--AT--GA--TAGGCTCTTGAAGGCACT-TGCTCCTCATAAATA------TTTCA-----------------------------------------------------------------------AT----CTA-------------------------TCTCTGCTCATTGAT--CATGCCACTTCATTA--------CT---GATCGGTTTATGGA-TTA---ATTATGCTAT--AATTTA-GAAA---ATAC----------------------------------------------------------A------AACCCGT---ACAGAATAGC--------------GTTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....CGCCTGACCTTCAAGTACGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2219.009063000
........................GCGCGAGTCCAACTACCATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002020000
..........................GCGAGTCCAACTACCATCTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002020000
................AAGTACGAGCGCGAGTCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
............CTTCAAGTACGAGCGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002020000
...........................CGAGTCCAACTACCATCTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000002
............CTTCAAGTACGAGCGCGAGTCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002020000
...............CAAGTACGAGCGCGAGTCCAACTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002020000
.........GACCTTCAAGTACGAGCGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...................TACGAGCGCGAGTCCAACTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
........................GCGCGAGTCCAACTACCATCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..................GTACGAGCGCGAGTCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
....CGCCTGACCTTCAAGTACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
..........ACCTTCAAGTACGAGCGCGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..............................GTCCAACTACCATCTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...........CCTTCAAGTACGAGCGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...............................TCCAACTACCATCTGCTCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100
..............TCAAGTACGAGCGCGAGTCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..................GTACGAGCGCGAGTCCAACTACCATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
....CGCCTGACCTTCAAGTACGAGCGCGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
.......................................................................................................................................................................................................................................................................................................................................CTA-------------------------TCTCTGCTCATTGAT--CAT...................................................................................................................................................................................2111.001100000
..........ACCTTCAAGTACGAGCGCGAGTCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...............CAAGTACGAGCGCGAGTCCAACTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
....CGCCTGACCTTCAAGTACGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...........CCTTCAAGTACGAGCGCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
............................GAGTCCAACTACCATCTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
....................................................................................................................................................................................................................................................................................................................................................................................CATGCCACTTCATTA--------CT---GATC......................................................................................................................................................2111.001010000
.............TTCAAGTACGAGCGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..............................GTCCAACTACCATCTGCTCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAC----------------------------------------------------------A------AACCCGT---ACAGAATAGC--------------....2211.001010000
....CGCCTGACCTTCAAGTACGAGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
......CCTGACCTTCAAGTACGAGCGCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
................................CCAACTACCATCTGCTCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...............CAAGTACGAGCGCGAGTCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.....GCCTGACCTTCAAGTACGAGCGCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..................GTACGAGCGCGAGTCCAACTAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
............CTTCAAGTACGAGCGCGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAC----------------------------------------------------------A------AACCCGT---ACAGAATAGC--------------GTT.2511.001001000
.................AGTACGAGCGCGAGTCCAACTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
..............TCAAGTACGAGCGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
............CTTCAAGTACGAGCGCGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
droBip1
CGGTCGCCTGACCTTCAAGTACGAGCGCGAGTCCAACTACCATCTGCTCGGTATGTTT----CAAATC-----------GAATTCTT--C------------CAA-----------------------------------------------------------------------------------------ACTAC--TA--TAGGCTCTTGAAGGCACT-TGCTCCTCATAAAACTA--TCTT-----------------------------------------------------------------------TCTAT----CTA-------------------------TCTCTGCTCATTGAT--CATGCCACTTCATTA--------CT---GATCGGTTTATGGA-TTA---ATTATGCTAT--AATTTA-GAAA---ATAC----------------------------------------------------------AA-----AACCCGT---ACAGAATAGC--------------GTTTSizeHit CountTotal NormTotal
No Reads
dp5
CGGTCGCCTGACCTTCAAGTACGAACGCGAGTCCAACTATCATTTGCTCGGTAAGTC----TC---------------------------------------------------------------------------------------------------------------------------------------------------------------T-CGTTCTATA------------TTTTGATCTATCTATTGATCAGCTATTCATTTGCCATTC----TGCTCGCCGTCTATCTATAATC--------TC--------------------------------------------------------------TATC--------------TATCGGTTTATGGT-T-T---CTTATGCT--------------------------------------------------------------------------------AA-----AACCTTT---ACAGAATAGC--------------CTTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........CCTTCAAGTACGAACGCGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020110000000
..................................................................................................................................................................................................................................................................................TTTGCCATTC----TGCTCGCCGTC...............................................................................................................................................................................................................................................................2112.0020100001000
.............TTCAAGTACGAACGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.................AGTACGAACGCGAGTCCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
..............................GTCCAACTATCATTTGCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010000000
..........ACCTTCAAGTACGAACGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.......CTGACCTTCAAGTACGAACGCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
....CGCCTGACCTTCAAGTACGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........CCTTCAAGTACGAACGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
.....................CGAACGCGAGTCCAACTATCATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
................AAGTACGAACGCGAGTCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.............................AGTCCAACTATCATTTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
.................................CAACTATCATTTGCTCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010000000
............................GAGTCCAACTATCATTTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
....CGCCTGACCTTCAAGTACGAACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
....CGCCTGACCTTCAAGTACGAACGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
....CGCCTGACCTTCAAGTACGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
....CGCCTGACCTTCAAGTACGAACGCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
......CCTGACCTTCAAGTACGAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..............TCAAGTACGAACGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
......................GAACGCGAGTCCAACTATCATTTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...........CCTTCAAGTACGAACGCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
.............TTCAAGTACGAACGCGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
......................GAACGCGAGTCCAACTAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100000
.........GACCTTCAAGTACGAACGCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................GAACGCGAGTCCAACTATCATTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
.............TTCAAGTACGAACGCGAGTCCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
....CGCCTGACCTTCAAGTACGAACGCGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
.....................CGAACGCGAGTCCAACTATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000
....CGCCTGACCTTCAAGTACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..GTCGCCTGACCTTCAAGTACGAACGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
droPer2
CGGTCGCCTGACCTTCAAGTACGAGCGCGAGTCCAACTATCATTTGCTCGGTAAGTC----TC---------------------------------------------------------------------------------------------------------------------------------------------------------------T-CGTTCTATA------------TTTCGATCCATCTATTGATCAGCTATTCATTTGCCATTC----TGCTCGTCATCTATCTATAATC--------TC--------------------------------------------------------------TATC--------------TATCGGTTTATGGT-T-T---CTTATGCT--------------------------------------------------------------------------------AA-----AACCTTT---ACAGAATAGC--------------CTTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......CCTGACCTTCAAGTACGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
................AAGTACGAGCGCGAGTCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
....................ACGAGCGCGAGTCCAACTATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
............CTTCAAGTACGAGCGCGAGTCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...............CAAGTACGAGCGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.........GACCTTCAAGTACGAGCGCGAGTCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..............................GTCCAACTATCATTTGCTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
..............................GTCCAACTATCATTTGCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
..............................GTCCAACTATCATTTGCTCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.................AGTACGAGCGCGAGTCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..................GTACGAGCGCGAGTCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
....CGCCTGACCTTCAAGTACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
..............................GTCCAACTATCATTTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.................AGTACGAGCGCGAGTCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
droWil2
CGGTCGCTTGACCTTCAAGTATGAACGTGAATCCAACTACCATTTGCTCGGTAAGTTG----A--ATAAG---------AAAATCTT--T------------------------------------------------------------------------------------------------------------C--AA--ATGGTTCTTA---GCACT------------------------------------------------------------CTTTGCGCTCGAAATC----------------------------------------------------------------ACAAAAT--CATTTCATCTTTT--ATAAT---TT---AAAAGGTTTTCGGT-T----------------CATTTAA-AAAA---ACAA--AA---ATCTTAGTTTCTTATACAGTAAGTTCTTAATATCAAA-------------CAA-----AAGTCTG---AGAGAACAGC--------------TTGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........GACCTTCAAGTATGAACGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19118.0018013140
........TGACCTTCAAGTATGAACGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2016.00600240
..........................GTGAATCCAACTACCATTTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200110
..................GTATGAACGTGAATCCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200020
..................GTATGAACGTGAATCCAACTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00210010
..............................ATCCAACTACCATTTGCTCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200020
..................GTATGAACGTGAATCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000
............................GAATCCAACTACCATTTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200020
..............................ATCCAACTACCATTTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200020
..................GTATGAACGTGAATCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000
.................AGTATGAACGTGAATCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
............................GAATCCAACTACCATTTGCTCGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
....CGCTTGACCTTCAAGTATGAACGTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.............................AATCCAACTACCATTTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.................................CAACTACCATTTGCTCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
...................TATGAACGTGAATCCAACTACCAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
..............................ATCCAACTACCATTTGCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
......................GAACGTGAATCCAACTACCATTTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
..........................GTGAATCCAACTACCATTTGCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
...............CAAGTATGAACGTGAATCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..........................GTGAATCCAACTACCATTTGCTCGAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
............CTTCAAGTATGAACGTGAATCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
..................GTATGAACGTGAATCCAACTACCATTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------CAA-----AAGTCTG---AGAGAACAGC--------------T...2211.00100100
...........CCTTCAAGTATGAACGTGAATCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
.......................AACGTGAATCCAACTACCATTTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
..............TCAAGTATGAACGTGAATCCAACTACCAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00101000
....................ATGAACGTGAATCCAACTACCATTTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010
..........................GTGAATCCAACTACCATTTGCTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
......CTTGACCTTCAAGTATGAACGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..................GTATGAACGTGAATCCAACTACCATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.................................CAACTACCATTTGCTCGAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20150.07101000
droVir3
CGGTCGTCTGACCTTCAAGTATGAGCGCGAGTCCAACTATCATCTGCTCGGTAAGTTA----G--TCG----------AGTTCC----------------------------------------------------------------------------------------------------------------------A---------TAGAGAACGCT-AAC------------TA--TCTT---------------------------------------------------------------------TAACTA----TCTATCTAAATACGTAG----------TAC-ATATACGATCAAT--CATGCCATCTCATTTACAATTCATT---TAAGGGTATATGGT-TT----TTAA------------------AATTG--TATAA---TTATTTATTGTATATATATTATGTCATTTAACTTAAGCCAGTTG------CAA-----AACCCTC---ACAGAAAAGC--------------GGCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....CGTCTGACCTTCAAGTATGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2215.005001200000000000000000000000001000000000000000000000000000001000
....CGTCTGACCTTCAAGTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003000000000000000000000000000000001010100000000000000000000000000
..................GTATGAGCGCGAGTCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000200000000000000000000000000000000000000000000000000000
....CGTCTGACCTTCAAGTATGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000001000000000001000000000000000000000000000000000
.................AGTATGAGCGCGAGTCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002001000000000000000010000000000000000000000000000000000000000000
....CGTCTGACCTTCAAGTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000000000000000000000000000000000000000000000000000000002000
.................AGTATGAGCGCGAGTCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000110000000000000000000000000000000000000000000
..................GTATGAGCGCGAGTCCAACTAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000000000000000000002000000000000000000000000000000000000000000
........................GCGCGAGTCCAACTATCATCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
....CGTCTGACCTTCAAGTATGAGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
..............................GTCCAACTATCATCTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
............CTTCAAGTATGAGCGCGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.........GACCTTCAAGTATGAGCGCGAGTCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
.............TTCAAGTATGAGCGCGAGTCCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000010000000000000000000000000000000000000000000
...........CCTTCAAGTATGAGCGCGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
.............TTCAAGTATGAGCGCGAGTCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000010000000000000000000000000000000000000000000
....CGTCTGACCTTCAAGTATGAGCGCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000001000
.......................AGCGCGAGTCCAACTATCATCTGCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000010000000000000000000000000000000000000000
....CGTCTGACCTTCAAGTATGAGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000010000000000000000000000000000
..................GTATGAGCGCGAGTCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
....CGTCTGACCTTCAAGTATGAGCGCGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTAACTTAAGCCAGTT.....................................................1911.001000000000000000010000000000000000000000000000000000000000000000
................AAGTATGAGCGCGAGTCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
...................TATGAGCGCGAGTCCAACTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000010000000000000000000000000000000000000000000
..........ACCTTCAAGTATGAGCGCGAGTCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000100
.................AGTATGAGCGCGAGTCCAACTAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000010000000000000000000000000000000000000000000
...............CAAGTATGAGCGCGAGTCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000100000000000000000000000000000000000000000
.........GACCTTCAAGTATGAGCGCGAGTCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000010000000000000000000000000000000000000000000
............CTTCAAGTATGAGCGCGAGTCCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
.........GACCTTCAAGTATGAGCGCGAGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
........................GCGCGAGTCCAACTATCATCTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
droMoj3
CGGTCGCCTGACCTTCAAATATGAGCGCGAATCCAACTATCATCTGCTCGGTAAGTTG----T--TAG----------GGTCTTTATTTATATAGGCTTAGGCG-CACCATCTGCAGTTTCTGCGCACACTATCTACCTATATAGCTATTTATCTTATTTATCTATCCATATATCTATCTTACATATAAGAATAT--AT--CA--TAG---------------------------------------------------------------------------------------------------------------------------------------------------GCTTGTACGTTTCAT--CATGCCATTTCATTTGAATTTCATT---TAAGGGTATATGGT-TTT---CTAA------------------AATTC--TATTA---TTATTTGTT----ATATTTTATATCTATTAACTCGGGCTAGTTGTCCCAGCCA-----AACC-AT---GTAGAAAAGCAACTGCTCGGCTCGGCTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....CGCCTGACCTTCAAATATGAGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
............CTTCAAATATGAGCGCGAATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.................AATATGAGCGCGAATCCAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
droGri2
CGGTCGCCTGACTTTCAAGTATGAGCGCGAGTCCAACTACCATTTGCTCGGTAAGTT----TG---------------AGT------------------------------------------------------------------------------------------------------------------------------------TT-----------------------------------------------AAGAGTTATTCACA-----------------------TATCTACAATCATTATCTATATATATATATAC--------G--GTATATAGCTATGGCTTGTACTATCAAT--CATGCCACATCATTTACAACTCACTTAATAAGGGTATATGGT-T-A---CAA-------------------AATTA--TTTAATGATTATTTAT------------------------------CAGTTGCAACAGAAA-----ATCCCTT---ACAGAAAAGC--------------GGTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................GAGCGCGAGTCCAACTACCATTTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110
...................TATGAGCGCGAGTCCAACTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110

Generated: 05/18/2015 at 05:32 PM