ID:

dsi_27667

 Coordinate:

2l:6256204-6256353 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.1 -2.0 -1.9

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TGTCTGCGTCTGTGATATGCGTCGATTTGAGCTCGGAGTCTGATGAGGAGGTAATATCCCGATTTCTCAGCGGACTCGTCAGTGCGTGTGTGTGTGAAAAAGTACAGTTGGATTTAAATAGGCTCGCTGCATGAGTGTGTGTGCGTGTTACACATAGTGTGGAATTAATTTTTTTTCGCGCTGCTTTTTTATTGAGAACGAGCAGACACGAACGTGCAGTGCCCCACTCATACAGTTGCAAAACGGTGTC
**************************************************************************.........((.(((...((((......))))...........))).)).****************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 O001
Testis
 M024
male body		 SRR553488
RT_0-2 hours eggs
 O002
Head
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
....................GTCGATTTGAGCTCGGAGTCT................................................................................................................................................................................................................. 21 0 1 4.00 4 4 0 0 0 0 0 0 0 0
.....................TTGATTTGAGCTCGGATTCGGAT.............................................................................................................................................................................................................. 23 3 2 3.50 7 0 6 0 0 0 1 0 0 0
.....................TTGATTTGAGCTCGGATTCTGA............................................................................................................................................................................................................... 22 2 1 3.00 3 0 3 0 0 0 0 0 0 0
.......................GATTTGAGCTCGGAGTCTGAT.............................................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
......................CGATTTGAGCTCGGAGTCT................................................................................................................................................................................................................. 19 0 1 2.00 2 1 0 0 0 0 0 1 0 0
.GTCTGCGTCTGTGATATGCG..................................................................................................................................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.........CTGTGATATGCGTCGATTTGA............................................................................................................................................................................................................................ 21 0 1 2.00 2 1 0 0 0 1 0 0 0 0
.....................TTGATTTGAGCTCGGATTCTGAT.............................................................................................................................................................................................................. 23 2 1 2.00 2 0 2 0 0 0 0 0 0 0
.......................................................................................................ACAGTTGGATTTAAATAGGCT.............................................................................................................................. 21 0 1 2.00 2 1 0 1 0 0 0 0 0 0
.............GATATGCGTCGATTTAAGCTCGGAGTC.................................................................................................................................................................................................................. 27 1 1 2.00 2 0 0 2 0 0 0 0 0 0
..........................................................................CTCGTCAGTGCGTGTGTGTGT........................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................CGCTGCTTTTTTATTGAGAACG.................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0
....................................................................................CGTGTGTGTGTGAAAAAG.................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................CGTCGATTTGAGCTCGGAGTC.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
................................................................TCTCAGCGGACTCGTCAGTGC..................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................GGGCGTGTTAAACATCGTGTGG........................................................................................ 22 3 1 1.00 1 0 0 0 0 0 0 0 0 1
.............................................................................GTCAGTGCGTGTGTGTGT........................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0
.............................AGCTCGGAGTCTGATGAGGAG........................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0
............................................................................CGTCAGTGCGTGTGTGTGTGA......................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..........................TTAAGCTCGGAGTCTGATGAG........................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0
................................TCGGAGTCTGATGAGGAGGTGA.................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0
.....................TTGATTTGAGCTCGGAGTCGGAT.............................................................................................................................................................................................................. 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................................................TTTCTCAGCGGACTCGTCGGTG...................................................................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0
........TCTGTGATATGCGTCGATTTA............................................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0
.....................TTGATTTGAGCTCGTAGTCGGAT.............................................................................................................................................................................................................. 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0
...............TATGCGTCGATTTGAGCTCGG...................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................TTCGCGCTGCTTTTTTATTG........................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......................TGATTTGAGCTCGGAGTCGGAT.............................................................................................................................................................................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0
......................CGATTTAAGCTCGGAGTCTG................................................................................................................................................................................................................ 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0
.............................................................................................................GGATTTAAATAGGCTCGCTGCA....................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0
......................................................................................................TACAGTTGGATTTAAATAGGC............................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........GTGATATGCGTCGATTTGAGC.......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.....................TTGATTTGAGCTCGGATTCGGA............................................................................................................................................................................................................... 22 3 6 0.67 4 0 4 0 0 0 0 0 0 0
......................TGATTTGAGCTCGGAGTCGGATA............................................................................................................................................................................................................. 23 3 2 0.50 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................ACATTGAGTGGAATTAATT................................................................................ 19 2 11 0.36 4 0 0 0 0 0 0 0 4 0
..................................................................................................................................................................................................................AGCGTGCAGTGCGCCACT...................... 18 2 3 0.33 1 0 0 0 0 0 0 0 1 0
....................GTTGATTTGAGCTCGGATTCGG................................................................................................................................................................................................................ 22 3 4 0.25 1 0 1 0 0 0 0 0 0 0
.....................TTGATTTGAGCTCGGATTCGG................................................................................................................................................................................................................ 21 3 16 0.25 4 0 4 0 0 0 0 0 0 0
......................TGATTTGAGCTCGGATTCGGAT.............................................................................................................................................................................................................. 22 3 16 0.13 2 0 2 0 0 0 0 0 0 0
............................................................................................TGTGAAAAAGTACAGC.............................................................................................................................................. 16 1 9 0.11 1 0 0 0 0 0 0 0 1 0
.......................GATTTGAGCTCGGATTCGG................................................................................................................................................................................................................ 19 2 18 0.06 1 0 1 0 0 0 0 0 0 0
...................................................................................................................AAATAGGGTCGCTGC........................................................................................................................ 15 1 20 0.05 1 0 0 0 0 0 0 0 1 0
..........................................................................................................................................GTGTACGTGTTATACA................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

ACAGACGCAGACACTATACGCAGCTAAACTCGAGCCTCAGACTACTCCTCCATTATAGGGCTAAAGAGTCGCCTGAGCAGTCACGCACACACACACTTTTTCATGTCAACCTAAATTTATCCGAGCGACGTACTCACACACACGCACAATGTGTATCACACCTTAATTAAAAAAAAGCGCGACGAAAAAATAACTCTTGCTCGTCTGTGCTTGCACGTCACGGGGTGAGTATGTCAACGTTTTGCCACAG
******************************************************************************************************************************.........((.(((...((((......))))...........))).)).************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 M023
head
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 M025
embryo
 M053
female body
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
.............................................................................................................................................................................................................GGTGCTTGCACGCCACG............................ 17 2 8 2.50 20 12 0 0 4 3 0 0 0 0 1 0
........................TAAGCTCGAGCCTCAGACTACT............................................................................................................................................................................................................ 22 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GTGCTTGCACGCCACG............................ 16 1 3 1.33 4 3 0 0 0 0 0 0 0 0 1 0
................................................................................................TTTTTCATGTCAACCTAAATTTAT.................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TACGGGGTGAGTATGTCAACGT.......... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.............................................................TAAAGAGTCGCCTGAGCAGTC........................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................AAACTCGAGCCTCAGACTACT............................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................ACGCACAATGTGTATCACACC........................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................GAAAAAATAACTCTTGCTCGTC............................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.....................AGCTAAACTCGAGCCTCAGAC................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
................................................TCCAGTATGGGGCTAAAG........................................................................................................................................................................................ 18 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CGGGGTGAGTATGTCAACGT.......... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................AAATAACTCTTGCTCGTCTGT.......................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CGGGGTGAGTATGTCAAGGTT......... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.......................CTAAACTCGAGCCTCAGACTA.............................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.................................................CCATTATAGGGCTAAAGAGTCG................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
..................................................................................................................................TACTCACACACACGCACAA..................................................................................................... 19 0 2 1.00 2 0 0 2 0 0 0 0 0 0 0 0
.............................................TCCTCCGTTATAGGGCTAAAG........................................................................................................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................ACTCACACACACGCACAA..................................................................................................... 18 0 6 1.00 6 0 0 6 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGCTTGCACGCCACG............................ 15 1 11 0.36 4 0 0 0 0 4 0 0 0 0 0 0
...................GCAGCTATACTCGAG........................................................................................................................................................................................................................ 15 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
................................................TCCAGTATGGGGCTAAA......................................................................................................................................................................................... 17 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.....................AACTAAACTCGAGCCT..................................................................................................................................................................................................................... 16 1 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0
..............................................................................................................................................................................................................GTGCTTGCACGCCAC............................. 15 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
.................................................CCAGTATGGGGCTGAAGA....................................................................................................................................................................................... 18 3 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GATGTGTATGTCAAAGTTTTG...... 21 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0
................................................................AGAGACGACTGAGCAGTCC....................................................................................................................................................................... 19 3 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0
................................................TTCAGTATGGGGCTAAAGA....................................................................................................................................................................................... 19 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................ATGAGCAGTCGCGCA................................................................................................................................................................... 15 2 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0
...............................................ATCCAGTATGGGGCTAAAG........................................................................................................................................................................................ 19 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0
...................GCAGCTATACTCGAGACCC.................................................................................................................................................................................................................... 19 3 11 0.09 1 0 0 0 0 1 0 0 0 0 0 0
.................AGGCAGCTATACTCGAG........................................................................................................................................................................................................................ 17 2 14 0.07 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................GGTGCTTGCACGCCAC............................. 16 2 19 0.05 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................AGCTCTTCTGTGCTTG..................................... 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................GTGCTTGCGCGCCACG............................ 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0
..............................CGAGCCTCAGGCTGATCCT......................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
....................CAGCTATACTCGAGAC...................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................GTATATCCCAGCGACGTA...................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:6256154-6256403 + dsi_27667 TGTCT-GCGTCTGTGATATGCGTCGATTTGAGCTCGGAGTCTGATGAGGAGGTAATATCC---------CGATTTCTC--A----GC--GGAC-TCGTC-AG----------TGC----GTGTGTGTGT-GAAAAAGTACAGTTGGA-TTTAAATAGGCTCGCTGCA-------------------------------------------------------------------------TGAGTGTGTGTGC--GTGT-----TACACATAG--TGTGGAATTAATTTTTTTTCGCGCTGCTTTTTT-ATT---G--AGAACGA---------------------GCAGACACGAACGTGCAGTGCC-CCACTCATACAGTTGCAAA------A--CG-GTGTC
droSec2 scaffold_5:4530505-4530754 + TGTCT-GCGTCTGTGATATGCGTCGATTTGAGCTCGGAGTCTGATGAGGAGGTAATATCC---------CGATTTCTC--A----GC--GGAC-TCGTC-AG----------TGC----GTGTGTGTGT-GAAAAAGTACAGTTGGA-TTTAAATAGGCTCGCTGCA-------------------------------------------------------------------------TGAGTGTGTGTGC--GTGT-----TACACATAG--TGTGGAATTAATTTTTTTTCGCGCTGCTTTTTT-ATT---G--AGAACGA---------------------GCAGACACGAACGTGCAGTGCC-CCACTCATACAGTTGCAAA------A--CG-GTGTC
dm3 chr2L:6481201-6481450 + TGTCT-GCGTCTGTGATATGCGTCGATTTGAGCTCGGAGTCTGATGAGGAGGTAATATCC---------CGATTTCCC--A----GC--GGAC-TCGTC-AG----------TGC----GTGTGTGTGT-GAAAAAGTACAGTTGGT-TTTAAATAGGCTCGCTGCA-------------------------------------------------------------------------TGAGTATGTGTGC--GTGT-----TACACATAG--TGTGGAATTAAATTTTTTTCGCGCTGCTTTTTT-ATT---G--AGAACGA---------------------GCAGACACGAACGTGCAGTGCC-CCACTCATACAGTTGCAAA------A--CG-GTGAC
droEre2 scaffold_4929:15390071-15390319 + TGTCT-GCGTCTGTGATATGTGTTGACTTGAGCTCGGAGTCTGATGAAGAGGTAATATCC---------CGATTTCCC--A----GC--GGAC-TCGCA-TG----------TGT----TTGTGTGTGT-GAAAAAGTACAGTTGGA-TTTAAATAGGCTCGGTGCA-------------------------------------------------------------------------TGAGTGTGAGTGC--GTGT-----TACACATAG--TGTGGAATTAATTTTTTTTCGCGCTGCTTTTTT-ATT---G--AGAGCGA---------------------GCAGACACGAACGTGCAGAACA-ACACTCACACAGTTGCAAA---------GT-GTAAC
droYak3 2L:6435413-6435662 - TGTCT-GCGTCTGTGATATGTGTTGATTTGAGCTCGGAGTCTGATGAAGAGGTAATTTCC---------CGATTTCCT--A----GA--AGAC-TCGTC-TG----------TGT----TTGTGTGTGT-GAAAAAGTACAGTTGGA-TTTAAATAGGCTCGCTGCA-------------------------------------------------------------------------TGAGTGTGTGTGC--GTGT-----TACACATAG--TGTGGAATTAATTTTTTTTCGCGCTGCTTTTTT-ATT---G--AGAGCGA---------------------GCAGACATGAACATGCAAAGCCCCCACTCACACAGTTGCAAA---------GT-GGGGC
droEug1 scf7180000409463:1906178-1906421 + TGTCT-GCATCGGTGATATGCGTTGATTTAAGCTCAGAGTCCGATGAAGAGGTAATATCC---------CGATTTCCC--TGCTGGTGCGGAC-T-GT---------------------CAGTGTGTGT-AAAAAAGTACAGTTGGA-TTTAAATAGGCTCGCTACT-------------------------------------------------------------------------TGAGAATGTGTGC--GTGT-----TTCACATAG--TGTGGAATTAATT--TTTTCGCGCTGCTTT--T-ATT---G--AGAGTGA---------------------GCAGACATGAACGTGCAGAGCC-CCACTCACACAATTGCAAA------A--GT-GG-CC
droBia1 scf7180000302422:2994601-2994856 - TGTCT-GCGTCGGTGGTTTGTGTTGACCTGAGTTCGGAATCCGATGAAGAGGTAATTTCC---------CGATTTCCC--A----GC--GGAC-TCCCCGCG----------TGCTT--GTGTGTGTGT-AAAAAAGTACAGTTGGA-TTTAAATAGGCTCGCTGGC-------------------------------------------------------------------------TGAGTGTGTGTGC--GTGTTTCGTTTCACATAG--TGTGGAATTAATT--TTTTCGCGCTGCTTT--T-ATT---G--AGAGCGAAC-------------------GGAGACACGAACTTGCGGAGCCCCCACGCACACAGATGCAGG------A--GT-GG-GC
droTak1 scf7180000415858:223443-223696 - TGTCT-GCGTCGGTGATATGCGTTGACCTGAGCTCGGAGTCCGATGAAGAGGTAATTTCCCCGATTTTCCGACTTCCC--A----GC--GGAC-TCCCGCC------------GT----GTGTGTGTGT-AAAAAAGTACAGTTGGA-TTTAAATAGGCTCGCTGCC-------------------------------------------------------------------------TGAGTGTGTGTGC--GTGT-----TTCACATAG--TGTGGAATTAATT--TTTTCGCGCTGCTTT--T-ATT---G--AGAGCGA---------------------GCAGACACGAACATGCAGAGCC-CCACTCACACAGATGCAAA------A--GT-GGGCC
droEle1 scf7180000490970:485873-486113 - TGTCT-ACTTCGGTTATTTGTGTAGACCTGAGCTCCGAGTCCGAGGAAGAGGTAATATCC---------CAATTTCCC--A----GC--GCAA-CCACC-G------------------ATGTGTGTGT-GAAAAAGTACAGTTGGA-TTTAAATAGGCTCGCTCGC-------------------------------------------------------------------------TGAGTGTGTGTGC--GTGC-----TTAACATAG--TGTGGAATTAAT-TTTTTTCGCGCTGCTTT--T-ATT---G--AGAGCGA---------------------GCAGACACGAACATGAGGGGA---CACTTACACAGCTGCAAA------A--TT-GGCTC
droRho1 scf7180000779524:179907-180149 + TGTCT-GCTTCGGTTATTTGTGTAGATCTTAGCTCGGAGTCCGACGAAGAGGTAATATCT---------AAATTTCCC--A----GC--GTGTTTGGCC-A------------------ATGTGTGTGT-AAAAAAGTACAGTTGGA-TTTAAATAGGCTCGCTGGC-------------------------------------------------------------------------TGAGTGTGTGTGC--GTGT-----TTCACATAG--TGTGGAATTATTTTTTTTTCGCGCTGCTTT--T-ATT---G--AGAGCGA---------------------GCAGACACGAACATGCAGGGA---AACTCACACAAATGCAAA------A--GC-GGTTC
droFic1 scf7180000453973:67698-67940 - TGTCG-GGCTCGGTGATATGCGTGGATTTGAGCTCGGAGTCCGATGAAGAGGTAATTTTT---------CGAGTTCCC--C----GC--GAAC-CCGGC--------------CC----CTGTGTGTAATGAAAAAGTACAGTTGGA-TTTAAATAGGCTCGCTAGC-------------------------------------------------------------------------TGAGTGTGTGTGC--GTGC-----TTCACATAG--TGTGGAATTAAT-TTTTTTCGCGCTGCTTT--T-ATT---G--AGAGCGA---------------------GCAGACACGAACATGCAGGGC---CACTCACACAGATGCAAA------A--GT-GGCGA
droKik1 scf7180000302684:363103-363329 + TGTCT-GCATCGGTGGTATGCGT---TCTGAGCTCGGACTCGGAGGAAGAGGTAA----------------ATTTCCC--A----GC--GGGC-CGGAC-G------------------CTGTGTGTGT-GAAAAAGTACAGTTGGATTTTAAATAGGCTTGCTGGC-------------------------------------------------------------------------CGAGTGTGTGTGC--GT--------TCACGTAGTGTGTGGAATTAAT-TTTTTTCGCGCTGCTTT--T-GTT---G--AGAGCGA------------------------GACACG-ACATGCACA--C-CCACCCACACATATGCAGG------T--GT-CGAGC
droAna3 scaffold_12916:13600664-13600903 - TGTCT-GCGTCGGTGATTTGCGTTGACTCGAGCTCGGACTCGGACGAAGAGGTAATTCCC---------AGGGTT--------------------------------------G-G-CT-AGTGTGGGT-AAAAAAGTACAGTCGGAATTCAAATAGGCTCGCTGCCTGGCTG-----------------------------------------------------------CGT----GTGTGTGTGTGTGTATGTGC--T--GCTATTAAG--AGTGGAATTTATTTCTTTTCGCGCTGTTTTTTTTTTT---G--AGAGCG-------------------------GACTCG--CATGTAAA--C-CCACCCACACAGATGCAAA------T--GG-GGGTG
droBip1 scf7180000396535:572284-572523 - TGTCT-GCGTCGGTGATTTGCGTTGACTCGAGCTCGGACTCCGAGGAAGAGGTAATTCCC---------AGAGTT--------------------------------------G-G-CT-AGTGTGTGT-AAAAAAGTACAGTCGGAATTCAAATAGGCTCGCTGCCTGGCTG-----------------------------------------------------------GGC----TTGTGTGTGTCTGT--GTGC--T--GTTATTAAG--AGTGGAATTTATTTCTTTTCGCGCTGCTTTTTT-TTTGTTG--AGAGCGG-------------------------ACT---GCATGTAAA--C-CCACCCACACAAATGCAAA------T--GGGGTGTG
dp5 4_group1:1537767-1537979 + TGGCT-GCGTCGCTTATCTGTGTGGATATAAGCTCGGAATCGGAGGAAGAGGTAAAG----------------CTA--------------------------TAAACGGTCG-----AT-TTTGTGTGT-TGAAAAGTACAGTTGTATTTTAAATAGGGTTTGTGCG-------------------------------------------------------------------------TAAGTGTGTGTGT--GTGT-----GTTACAATGTATGTGAAATAAA-TTTTTTTCGCGCTGCTTT--T-ATT---G--AGAGCGAA------A-------------------------------------CACACATACCAGTGCAAA------T--GT-GC-AG
droPer2 scaffold_5:3668787-3668999 - dpe_1767 TGGCT-GCGTCGCTTATCTGTGTGGATATAAGCTCGGAATCGGAGGAAGAGGTAAAG----------------CTA--------------------------TAAACGGTCG-----AT-TTTGTGTGT-TGAAAAGTACAGTTGTATTTTAAATAGGGTTTGTGCG-------------------------------------------------------------------------TAAGTGTGTGTGT--GTGT-----ATTACAATGTATGTGAAATAAA-TTTTTTTCGCGCTGCTTT--T-ATT---G--AGAGCGAA------A-------------------------------------CACACATACCAGTGCAAA------T--GT-GC-AG
droWil2 scf2_1100000004884:588050-588319 + T--CG-GCATCGGTCATTTATGTTGATTTAAGCTCGGACTCGGAGGATGAGGTATAAAGC---------AAAT-------A----GG--G----------GGTAAAT------------GGGCGGTTGT-AGTACAGTACAGCTTAT-TTTAATTAGGTTTTCTCGAAACTTATAAGTGTAT---------------------------------------GCGGAAATTCGTGC----ATGTGTGTGCGTGT--GTGT-----TTTACAA----------ATATATAATTTTTCGCGCTGCTGC--G-------A--AGAGCGTGTGCATAT--------------CACACATACTCATTCGAATTC-ACACACACACACATGGACAAACTAAAAAGAGCAAAA
droVir3 scaffold_12723:4487800-4488108 + dvi_1672 TGACT----TCGGTTATATATGTGGATTTGAGCTCGGATTCGGAGGAGGAGGTAAAAGCG---------CCAGTG-AC--A----GCGCC--A-ACG------------------TT--CAGCTGGTGT-AGAAAAGTACAGTTGTATTTTTAATAGGTTTTGTGCAGTGGTATGCGCGTATTAGTGTT-GCGTGCGTGTGTCTATATGTGTATTATA------------TGTGCATATGTGCTTGTGTGTGT--ATAT-----TACAAATTA--TGTGTACGAATATCTTTTTCGCGCTGCTTT--T-ATTGTTGCTCACACAT---------------------ACAGACGCACACCAGCAACTCG-ACACGCACACACTTGCACAG--CCAA--TG-CTGCC
droMoj3 scaffold_6500:7570518-7570856 - dmo_1484 ACTATGACTTCGGTTATATATGTGGAATTGAGCTCGGATTCGGAGGAGGAGGTAAAAGCA---------CCAGTG-AC--A----GCGCC--A-AC----AA----------TG-TT--CAGCTGGTGT-AGAAAAGTACAGTTGTATTTTTAATAGGTTTTGTGCATTGGTGTGCGCGTGTTAGTGTTGGCGTGCGTGCGTTTATATTTGTTTCATACATGTGAA----TGAGCATGTGTGTGTGAGTGTGTGTGTAT-----TACAAATTA--TGTGTACGAATATCATTTTCGCGGTGCTTT--T-ATTGTTG----CCCGC-------ACACATATGCATATGCATACATACACCAACAGCTCG-ACGCGCACACACATGCACAGATCCAA--TG-CTGCC
droGri2 scaffold_15126:3442074-3442221 + TGA----CATCGGTTATATATGTGGATTTGAGCTCGGATTCGGAGGAAGAGGTAAAAGCG---------GCAGTAGCCACTAGCAGCGCC------AAC-TA----------TG-TT--CAGCTGGTGT-AGAAAAGTACAGTTGTATTTTTAATAGGTTTTGTGCA-------------------------------------------------------------------------TTGGTGTGCGCGT--AT----------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGTCT-GCGTCTGTGATATGCGTCGATTTGAGCTCGGAGTCTGATGAGGAGGTAATATCC---------CGATTTCTC--A----GC--GGAC-TCGTC-AG----------TGC----GTGTGTGTGT-GAAAAAGTACAGTTGGA-TTTAAATAGGCTCGCTGCA-------------------------------------------------------------------------TGAGTGTGTGTGC--GTGT-----TACACATAG--TGTGGAATTAATTTTTTTTCGCGCTGCTTTTTT-ATT---G--AGAACGA---------------------GCAGACACGAACGTGCAGTGCC-CCACTCATACAGTTGCAAA------A--CG-GTGTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................GTCGATTTGAGCTCGGAGTCT...........................................................................................................................................................................................................................................................................................................................................................................2114.00440000000000000000
........................GATTTGAGCTCGGAGTCTGAT........................................................................................................................................................................................................................................................................................................................................................................2112.00220000000000000000
.......................CGATTTGAGCTCGGAGTCT...........................................................................................................................................................................................................................................................................................................................................................................1912.00210000100000000000
.GTCT-GCGTCTGTGATATGCG...............................................................................................................................................................................................................................................................................................................................................................................................2012.00220000000000000000
..........CTGTGATATGCGTCGATTTGA......................................................................................................................................................................................................................................................................................................................................................................................2112.00211000000000000000
..........................................................................................................................................ACAGTTGGA-TTTAAATAGGCT.....................................................................................................................................................................................................................................................2112.00210000000000001000
............................................................................................C-TCGTC-AG----------TGC----GTGTGTGTGT-...................................................................................................................................................................................................................................................................................2111.00100001000000000000
........................................................................................................................................................................................................................................................................................................CGCTGCTTTTTT-ATT---G--AGAACG.................................................................................2211.00100001000000000000
..................................................................................................................C----GTGTGTGTGT-GAAAAAG............................................................................................................................................................................................................................................................................1811.00110000000000000000
....................CGTCGATTTGAGCTCGGAGTC............................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
..........................................................................TCTC--A----GC--GGAC-TCGTC-AG----------TGC----..............................................................................................................................................................................................................................................................................................2111.00110000000000000000
................................................................................................GTC-AG----------TGC----GTGTGTGTGT-...................................................................................................................................................................................................................................................................................1811.00100000100000000000
..............................AGCTCGGAGTCTGATGAGGAG..................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
...............................................................................................CGTC-AG----------TGC----GTGTGTGTGT-GA.................................................................................................................................................................................................................................................................................2111.00100001000000000000
.........TCTGTGATATGCGTCGATTTA.......................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
................TATGCGTCGATTTGAGCTCGG................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
....................................................................................................................................................................................................................................................................................................TTCGCGCTGCTTTTTT-ATT---G--.......................................................................................2011.00100000001000000000
................................................................................................................................................GGA-TTTAAATAGGCTCGCTGCA-------------------------------------------------------------------------.....................................................................................................................................................................2211.00100000000010000000
.........................................................................................................................................TACAGTTGGA-TTTAAATAGGC......................................................................................................................................................................................................................................................2111.00110000000000000000
............GTGATATGCGTCGATTTGAGC....................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
..............................................................................................................................TGT-GAAAAAGTACAGC......................................................................................................................................................................................................................................................................1690.11100000000001000000
droSec2
TGTCT-GCGTCTGTGATATGCGTCGATTTGAGCTCGGAGTCTGATGAGGAGGTAATATCC---------CGATTTCTC--A----GC--GGAC-TCGTC-AG----------TGC----GTGTGTGTGT-GAAAAAGTACAGTTGGA-TTTAAATAGGCTCGCTGCA-------------------------------------------------------------------------TGAGTGTGTGTGC--GTGT-----TACACATAG--TGTGGAATTAATTTTTTTTCGCGCTGCTTTTTT-ATT---G--AGAACGA---------------------GCAGACACGAACGTGCAGTGCC-CCACTCATACAGTTGCAAA------A--CG-GTGTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................ACAGTTGGA-TTTAAATAGGCTCG...................................................................................................................................................................................................................................................2311.0011000
............................TGAGCTCGGAGTCTGATGAGGAGT.................................................................................................................................................................................................................................................................................................................................................................2411.0010100
.........TCTGTGATATGCGTCGATTTG.......................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
............................................................................................C-TCGTC-AG----------TGC----GTGTGTG.......................................................................................................................................................................................................................................................................................1811.0010001
............................TGAGCTCGGAGTCTGATGAGG....................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..................................................................................................................................................................................................................................................................................................................TT-ATT---G--AGAACGA---------------------GCAGACACG..................................................2211.0010001
.................................................................................................................................................................................................................................................................................................................................................................CGAACGTGCAGTGCC-CCACTCA.............................2211.0011000
dm3
TGTCT-GCGTCTGTGATATGCGTCGATTTGAGCTCGGAGTCTGATGAGGAGGTAATATCC---------CGATTTCCC--A----GC--GGAC-TCGTC-AG----------TGC----GTGTGTGTGT-GAAAAAGTACAGTTGGT-TTTAAATAGGCTCGCTGCA-------------------------------------------------------------------------TGAGTATGTGTGC--GTGT-----TACACATAG--TGTGGAATTAAATTTTTTTCGCGCTGCTTTTTT-ATT---G--AGAACGA---------------------GCAGACACGAACGTGCAGTGCC-CCACTCATACAGTTGCAAA------A--CG-GTGACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................TTGAGCTCGGAGTCTGATGAG.....................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
....T-GCGTCTGTGATATGCGTCGAT..........................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000
...........................TTGAGCTCGGAGTCTGATGAGG....................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
........................GATTTGAGCTCGGAGTCTGATGAGGAGT.................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TGTGC--GTGT-----TACACATAG--TGT...............................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000000000
..........................................................................TCCC--A----GC--GGAC-TCGTC-AG----------TGC----..............................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................GAC-TCGTC-AG----------TGC----GTGTGTGT......................................................................................................................................................................................................................................................................................2112.0020000000000000000000000001000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GTGATATGCGTCGATTTG.......................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TGAGTATGTGTGC--GTGT-----TACA.........................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000010000000000000000
......................................................................GATTTCCC--A----GC--GGAC-TCGTC-AG----------T....................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ATATGCGTCGATTTGAGCTCG.................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................GCTCGGAGTCTGATGAGGAG..................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GATTTGAGCTCGGAGTCTG..........................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CGTCGATTTGAGCTCGGAGTC............................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
............................TGAGCTCGGAGTCTGATGAGG....................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGTCT-GCGTCTGTGATATGCG...............................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000100000
...........................TTGAGCTCGGAGTCTGATGAGGAGTC................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................TATGCGTCGATTTGAGCTCGG................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
........................GATTTGAGCTCGGAGTCTGAT........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................GTCGATTTGAGCTCGGAGTC............................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TATGCGTCGATTTGAGCTCGGAG..............................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................GTGTGT-GAAAAAGTACAGTTG....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ATTTGAGCTCGGAGTCTGATGA......................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TTTGAGCTCGGAGTCTGATGAGGAG..................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
....................................................................................................................................................................................................................................................................................................................................A---------------------GCAGACACGAACGTGCAGT........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.................ATGCGTCGATTTGAGCTCGG................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...........................................................................CCC--A----GC--GGAC-TCGTC-AG----------TG...................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.................................................................................................................................................................................................................................................................................................................TTT-ATT---G--AGAACGA---------------------GCAGACACGAA................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.................................TCGGAGTCTGATGAGGAG..................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................AGGTAATATCC---------CGATTTCCC--A----GC--............................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TTTCCC--A----GC--GGAC-TCGTC-AG----------C....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...............................................................................................CGTC-AG----------TGC----GTGTGTGTGT-GA.................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................C--GTGT-----TACACATAG--TGTGGAA...........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GAGCTCGGAGTCTGATGAGGAGTC................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TGAGCTCGGAGTCTGATGAGGAG..................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......GCGTCTGTGATATGCGTCG............................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................GT-GAAAAAGTACAGTTGGT-TTA..............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CTCGGAGTCTGATGAGGAGT.................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................AACGA---------------------GCAGACACGAACGTGC...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TACAGTTGGT-TTTAAATAGGC......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TTTTTTTCGCGCTGCTTTTTT-................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ATTTGAGCTCGGAGTCTGATG.......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................................................................................................................................................................................................ATTAAATTTTTTTCGCGCTGC.......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GCTCGGAGTCTGATGAGGAGT.................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGATATGCGTCGATTTGAGCT...................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................GTGT-GAAAAAGTACAGTTGGT-TT...............................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
...........TGTGATATGCGTCGATTTGAGCTCG.................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................GAC-TCGTC-AG----------TGC----GTGTGTGTG.....................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..........................................................................................................................TGTGTGT-GAAAAAGTACAGTTG....................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CTTTTTT-ATT---G--AGAACGA---------------------GCAG.......................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GATTTCCC--A----GC--GGAC-TCGTC-.................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AGCTCGGAGTCTGATGAGGAG..................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........TCTGTGATATGCGTCGATTTG.......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................CGTCGATTTGAGCTCGGAGTCTGAT........................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AATTAAATTTTTTTCGCGCTG........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..............................................................................................................................................................................................................................................................................................ATTTTTTTCGCGCTGCTTTTT..................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TCGGAGTCTGATGAGGAGGTA...............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TTGAGCTCGGAGTCTGATGAGGAGT.................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TGC--GTGT-----TACACATAG--TGTGG.............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TCGATTTGAGCTCGGAGTCTG..........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............GATATGCGTCGATTTGAGCTCG.................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TGC--GTGT-----TACACATAG--TGTGGAA...........................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................................................TCGTC-AG----------TGC----GTGTGTGTGT-G..................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................TGAGCTCGGAGTCTGATGAGGAGT.................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................AGAACGA---------------------GCAGACACGAACG..............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...............................GCTCGGAGTCTGATGAGGA...................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........TGTGATATGCGTCGATTTGAGCTCGGA...............................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................................................................................GAC-TCGTC-AG----------TGC----GTGT..........................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TTTTT-ATT---G--AGAACGA---------------------GCAGA......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................ATAGGCTCGCTGCA-------------------------------------------------------------------------TGAGTG...............................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........................................................................................................................................................................................................................................................TGC--GTGT-----TACACATAG--TGTGGAAT..........................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AGCTCGGAGTCTGATGAGG....................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TTTGAGCTCGGAGTCTGATGAG.....................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGTGGAATTAAATTTTTTTCTG............................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................................................................GTGGAATTAAATTTTTTTT..............................................................................................................1980.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TGTCT-GCGTCTGTGATATGTGTTGACTTGAGCTCGGAGTCTGATGAAGAGGTAATATCC---------CGATTTCCC--A----GC--GGAC-TCGCA-TG----------TGT----TTGTGTGTGT-GAAAAAGTACAGTTGGA-TTTAAATAGGCTCGGTGCA-------------------------------------------------------------------------TGAGTGTGAGTGC--GTGT-----TACACATAG--TGTGGAATTAATTTTTTTTCGCGCTGCTTTTTT-ATT---G--AGAGCGA---------------------GCAGACACGAACGTGCAGAACA-ACACTCACACAGTTGCAAA---------GT-GTAACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................CTCGGAGTCTGATGAAGAGT.................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
..................................CGGAGTCTGATGAAGAGT.................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
droYak3
TGTCT-GCGTCTGTGATATGTGTTGATTTGAGCTCGGAGTCTGATGAAGAGGTAATTTCC---------CGATTTCCT--A----GA--AGAC-TCGTC-TG----------TGT----TTGTGTGTGT-GAAAAAGTACAGTTGGA-TTTAAATAGGCTCGCTGCA-------------------------------------------------------------------------TGAGTGTGTGTGC--GTGT-----TACACATAG--TGTGGAATTAATTTTTTTTCGCGCTGCTTTTTT-ATT---G--AGAGCGA---------------------GCAGACATGAACATGCAAAGCCCCCACTCACACAGTTGCAAA---------GT-GGGGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................GTTGATTTGAGCTCGGAGTCTGAT........................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.................................TCGGAGTCTGATGAAGAGT.................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..........................TTTGAGCTCGGAGTCTGATGAAGAGT.................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.....................GTTGATTTGAGCTCGGAGTCTGATG.......................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.....................GTTGATTTGAGCTCGGAGT.............................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.................................................................................................................................................................................................................................................................................................................TTT-ATT---G--AGAGCGA---------------------GCAGACA....................................................2111.00101000000000
..........................................................................................................................................................................................................................................................TGC--GTGT-----TACACATAG--TGTGG.............................................................................................................................2111.00100000100000
..................................CGGAGTCTGATGAAGAGT.................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
droEug1
TGTCT-GCATCGGTGATATGCGTTGATTTAAGCTCAGAGTCCGATGAAGAGGTAATATCC---------CGATTTCCC--TGCTGGTGCGGAC-T-GT---------------------CAGTGTGTGT-AAAAAAGTACAGTTGGA-TTTAAATAGGCTCGCTACT-------------------------------------------------------------------------TGAGAATGTGTGC--GTGT-----TTCACATAG--TGTGGAATTAATT--TTTTCGCGCTGCTTT--T-ATT---G--AGAGTGA---------------------GCAGACATGAACGTGCAGAGCC-CCACTCACACAATTGCAAA------A--GT-GG-CCSizeHit CountTotal NormTotal
No Reads
droBia1
TGTCT-GCGTCGGTGGTTTGTGTTGACCTGAGTTCGGAATCCGATGAAGAGGTAATTTCC---------CGATTTCCC--A----GC--GGAC-TCCCCGCG----------TGCTT--GTGTGTGTGT-AAAAAAGTACAGTTGGA-TTTAAATAGGCTCGCTGGC-------------------------------------------------------------------------TGAGTGTGTGTGC--GTGTTTCGTTTCACATAG--TGTGGAATTAATT--TTTTCGCGCTGCTTT--T-ATT---G--AGAGCGAAC-------------------GGAGACACGAACTTGCGGAGCCCCCACGCACACAGATGCAGG------A--GT-GG-GCSizeHit CountTotal NormTotal
No Reads
droTak1
TGTCT-GCGTCGGTGATATGCGTTGACCTGAGCTCGGAGTCCGATGAAGAGGTAATTTCCCCGATTTTCCGACTTCCC--A----GC--GGAC-TCCCGCC------------GT----GTGTGTGTGT-AAAAAAGTACAGTTGGA-TTTAAATAGGCTCGCTGCC-------------------------------------------------------------------------TGAGTGTGTGTGC--GTGT-----TTCACATAG--TGTGGAATTAATT--TTTTCGCGCTGCTTT--T-ATT---G--AGAGCGA---------------------GCAGACACGAACATGCAGAGCC-CCACTCACACAGATGCAAA------A--GT-GGGCCSizeHit CountTotal NormTotal
No Reads
droEle1
TGTCT-ACTTCGGTTATTTGTGTAGACCTGAGCTCCGAGTCCGAGGAAGAGGTAATATCC---------CAATTTCCC--A----GC--GCAA-CCACC-G------------------ATGTGTGTGT-GAAAAAGTACAGTTGGA-TTTAAATAGGCTCGCTCGC-------------------------------------------------------------------------TGAGTGTGTGTGC--GTGC-----TTAACATAG--TGTGGAATTAAT-TTTTTTCGCGCTGCTTT--T-ATT---G--AGAGCGA---------------------GCAGACACGAACATGAGGGGA---CACTTACACAGCTGCAAA------A--TT-GGCTCSizeHit CountTotal NormTotal
No Reads
droRho1
TGTCT-GCTTCGGTTATTTGTGTAGATCTTAGCTCGGAGTCCGACGAAGAGGTAATATCT---------AAATTTCCC--A----GC--GTGTTTGGCC-A------------------ATGTGTGTGT-AAAAAAGTACAGTTGGA-TTTAAATAGGCTCGCTGGC-------------------------------------------------------------------------TGAGTGTGTGTGC--GTGT-----TTCACATAG--TGTGGAATTATTTTTTTTTCGCGCTGCTTT--T-ATT---G--AGAGCGA---------------------GCAGACACGAACATGCAGGGA---AACTCACACAAATGCAAA------A--GC-GGTTCSizeHit CountTotal NormTotal
No Reads
droFic1
TGTCG-GGCTCGGTGATATGCGTGGATTTGAGCTCGGAGTCCGATGAAGAGGTAATTTTT---------CGAGTTCCC--C----GC--GAAC-CCGGC--------------CC----CTGTGTGTAATGAAAAAGTACAGTTGGA-TTTAAATAGGCTCGCTAGC-------------------------------------------------------------------------TGAGTGTGTGTGC--GTGC-----TTCACATAG--TGTGGAATTAAT-TTTTTTCGCGCTGCTTT--T-ATT---G--AGAGCGA---------------------GCAGACACGAACATGCAGGGC---CACTCACACAGATGCAAA------A--GT-GGCGASizeHit CountTotal NormTotal
No Reads
droKik1
TGTCT-GCATCGGTGGTATGCGT---TCTGAGCTCGGACTCGGAGGAAGAGGTAA----------------ATTTCCC--A----GC--GGGC-CGGAC-G------------------CTGTGTGTGT-GAAAAAGTACAGTTGGATTTTAAATAGGCTTGCTGGC-------------------------------------------------------------------------CGAGTGTGTGTGC--GT--------TCACGTAGTGTGTGGAATTAAT-TTTTTTCGCGCTGCTTT--T-GTT---G--AGAGCGA------------------------GACACG-ACATGCACA--C-CCACCCACACATATGCAGG------T--GT-CGAGCSizeHit CountTotal NormTotal
No Reads
droAna3
TGTCT-GCGTCGGTGATTTGCGTTGACTCGAGCTCGGACTCGGACGAAGAGGTAATTCCC---------AGGGTT--------------------------------------G-G-CT-AGTGTGGGT-AAAAAAGTACAGTCGGAATTCAAATAGGCTCGCTGCCTGGCTG-----------------------------------------------------------CGT----GTGTGTGTGTGTGTATGTGC--T--GCTATTAAG--AGTGGAATTTATTTCTTTTCGCGCTGTTTTTTTTTTT---G--AGAGCG-------------------------GACTCG--CATGTAAA--C-CCACCCACACAGATGCAAA------T--GG-GGGTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................AGCTCGGACTCGGACGAAGA...................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.....................GTTGACTCGAGCTCGGACTCGGACG.......................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....................GTTGACTCGAGCTCGGACTC............................................................................................................................................................................................................................................................................................................................................................................2011.001000010
..............................................................................................................................................TCGGAATTCAAATAGGCTCGCTGCCT.............................................................................................................................................................................................................................................2611.001100000
................TTTGCGTTGACTCGAGCTCGG................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droBip1
TGTCT-GCGTCGGTGATTTGCGTTGACTCGAGCTCGGACTCCGAGGAAGAGGTAATTCCC---------AGAGTT--------------------------------------G-G-CT-AGTGTGTGT-AAAAAAGTACAGTCGGAATTCAAATAGGCTCGCTGCCTGGCTG-----------------------------------------------------------GGC----TTGTGTGTGTCTGT--GTGC--T--GTTATTAAG--AGTGGAATTTATTTCTTTTCGCGCTGCTTTTTT-TTTGTTG--AGAGCGG-------------------------ACT---GCATGTAAA--C-CCACCCACACAAATGCAAA------T--GGGGTGTGSizeHit CountTotal NormTotal
No Reads
dp5
TGGCT-GCGTCGCTTATCTGTGTGGATATAAGCTCGGAATCGGAGGAAGAGGTAAAG----------------CTA--------------------------TAAACGGTCG-----AT-TTTGTGTGT-TGAAAAGTACAGTTGTATTTTAAATAGGGTTTGTGCG-------------------------------------------------------------------------TAAGTGTGTGTGT--GTGT-----GTTACAATGTATGTGAAATAAA-TTTTTTTCGCGCTGCTTT--T-ATT---G--AGAGCGAA------A-------------------------------------CACACATACCAGTGCAAA------T--GT-GC-AGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................TGGATATAAGCTCGGAATCGG..........................................................................................................................................................................................................................................................................................................................................................................2113.0030000000030
........................................................G----------------CTA--------------------------TAAACGGTCG-----AT-TTTGT........................................................................................................................................................................................................................................................................................2111.0010100000000
TGGCT-GCGTCGCTTATCTGTG...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
........................GATATAAGCTCGGAATCGGAG........................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
.......................GGATATAAGCTCGGAATCGGAG........................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
...............................................................................................................................................................TTTGTGCG-------------------------------------------------------------------------TAAGTGTGTGT..........................................................................................................................................................1911.0010100000000
.........................ATATAAGCTCGGAATCGGAG........................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................................................................................................................................................................................TCGCGCTGCTTT--T-ATT---G--AGAGC..................................................................................2211.0010100000000
droPer2
TGGCT-GCGTCGCTTATCTGTGTGGATATAAGCTCGGAATCGGAGGAAGAGGTAAAG----------------CTA--------------------------TAAACGGTCG-----AT-TTTGTGTGT-TGAAAAGTACAGTTGTATTTTAAATAGGGTTTGTGCG-------------------------------------------------------------------------TAAGTGTGTGTGT--GTGT-----ATTACAATGTATGTGAAATAAA-TTTTTTTCGCGCTGCTTT--T-ATT---G--AGAGCGAA------A-------------------------------------CACACATACCAGTGCAAA------T--GT-GC-AGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................GTAAAG----------------CTA--------------------------TAAACGGTCG-----AT-.............................................................................................................................................................................................................................................................................................2112.002200000
droWil2
T--CG-GCATCGGTCATTTATGTTGATTTAAGCTCGGACTCGGAGGATGAGGTATAAAGC---------AAAT-------A----GG--G----------GGTAAAT------------GGGCGGTTGT-AGTACAGTACAGCTTAT-TTTAATTAGGTTTTCTCGAAACTTATAAGTGTAT---------------------------------------GCGGAAATTCGTGC----ATGTGTGTGCGTGT--GTGT-----TTTACAA----------ATATATAATTTTTCGCGCTGCTGC--G-------A--AGAGCGTGTGCATAT--------------CACACATACTCATTCGAATTC-ACACACACACACATGGACAAACTAAAAAGAGCAAAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................GATTTAAGCTCGGACTCGGA.........................................................................................................................................................................................................................................................................................................................................................................2014.00430100
.......................TGATTTAAGCTCGGACTCG...........................................................................................................................................................................................................................................................................................................................................................................1913.00330000
.......................TGATTTAAGCTCGGACTCGGA.........................................................................................................................................................................................................................................................................................................................................................................2112.00220000
..............................................ATGAGGTATAAAGC---------AAAT-------A----GG--............................................................................................................................................................................................................................................................................................................................2112.00200020
................................CTCGGACTCGGAGGATGAGGT................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..............................................ATGAGGTATAAAGC---------AAAT-------A----GG--G----------GC...............................................................................................................................................................................................................................................................................................................2411.00100010
..............................................................................................................................................................................................................................CGGAAATTCGTGC----ATGTGTGT..............................................................................................................................................................2111.00101000
..............................................ATGAGGTATAAAGC---------AAAT-------A----G...............................................................................................................................................................................................................................................................................................................................2011.00100001
.............................AAGCTCGGACTCGGAGGATGAG..................................................................................................................................................................................................................................................................................................................................................................2211.00100001
.....................................................................................................................................................................................................................................TCGTGC----ATGTGTGTGCGTG.........................................................................................................................................................1911.00101000
........................GATTTAAGCTCGGACTCGGAG........................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..............................AGCTCGGACTCGGAGGATGAG..................................................................................................................................................................................................................................................................................................................................................................2111.00100010
....................................................................................................................................................................................................................................................TGTGCGTGT--GTGT-----TTTACAA----------............................................................................................................................2011.00100001
..............................................................................................................................................................................................................................................................................................................................AGAGCGTGTGCATAT--------------CACACA....................................................2111.00100010
.........................ATTTAAGCTCGGACTCGGAG........................................................................................................................................................................................................................................................................................................................................................................2011.00100001
...............................................TGAGGTATAAAGC---------AAAT-------A----GG--G----------.................................................................................................................................................................................................................................................................................................................2111.00100001
........................................................................................................................................................................................................................................TGC----ATGTGTGTGCGTGT--GTG...................................................................................................................................................20100.10100100
droVir3
TGACT----TCGGTTATATATGTGGATTTGAGCTCGGATTCGGAGGAGGAGGTAAAAGCG---------CCAGTG-AC--A----GCGCC--A-ACG------------------TT--CAGCTGGTGT-AGAAAAGTACAGTTGTATTTTTAATAGGTTTTGTGCAGTGGTATGCGCGTATTAGTGTT-GCGTGCGTGTGTCTATATGTGTATTATA------------TGTGCATATGTGCTTGTGTGTGT--ATAT-----TACAAATTA--TGTGTACGAATATCTTTTTCGCGCTGCTTT--T-ATTGTTGCTCACACAT---------------------ACAGACGCACACCAGCAACTCG-ACACGCACACACTTGCACAG--CCAA--TG-CTGCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................GGAGGAGGAGGTAAAAGC..........................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000100000000000000000000000000
............GTTATATATGTGGATTTGAGCT...................................................................................................................................................................................................................................................................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................ATGCGCGTATTAGTGTT-GCG....................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................GTATTATA------------TGTGCATATGTGCC.................................................................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................GTTTTGTGCAGTGGTATGCGC...................................................................................................................................................................................................................................2111.001000001000000000000000000000000000000000000000000000000000000000
........................GATTTGAGCTCGGATTCGGAG........................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TTGTTGCTCACACAT---------------------ACAGACGCACA................................................2611.001000000000000000000000000000010000000000000000000000000000000000
...............ATATATGTGGATTTGAGCTCGGAT..............................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000100000000000000000000000000
............................TGAGCTCGGATTCGGAGGAGG....................................................................................................................................................................................................................................................................................................................................................................2111.001000000010000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................CAGTGGTATGCGCGTATTAG............................................................................................................................................................................................................................2011.001000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................AGGTTTTGTGCAGTGGTATG......................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
..........................TTTGAGCTCGGATTCGGAGGAG.....................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
................TATATGTGGATTTGAGCTCGG................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.................ATATGTGGATTTGAGCTC..................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
ACTATGACTTCGGTTATATATGTGGAATTGAGCTCGGATTCGGAGGAGGAGGTAAAAGCA---------CCAGTG-AC--A----GCGCC--A-AC----AA----------TG-TT--CAGCTGGTGT-AGAAAAGTACAGTTGTATTTTTAATAGGTTTTGTGCATTGGTGTGCGCGTGTTAGTGTTGGCGTGCGTGCGTTTATATTTGTTTCATACATGTGAA----TGAGCATGTGTGTGTGAGTGTGTGTGTAT-----TACAAATTA--TGTGTACGAATATCATTTTCGCGGTGCTTT--T-ATTGTTG----CCCGC-------ACACATATGCATATGCATACATACACCAACAGCTCG-ACGCGCACACACATGCACAGATCCAA--TG-CTGCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................................................................................................CACCAACAGCTCG-ACGCGCACACACATG.....................2811.001000010
..............................................................................................................................................................TTTTGTGCATTGGTGTGCGCG..................................................................................................................................................................................................................................2111.001001000
droGri2
TGA----CATCGGTTATATATGTGGATTTGAGCTCGGATTCGGAGGAAGAGGTAAAAGCG---------GCAGTAGCCACTAGCAGCGCC------AAC-TA----------TG-TT--CAGCTGGTGT-AGAAAAGTACAGTTGTATTTTTAATAGGTTTTGTGCA-------------------------------------------------------------------------TTGGTGTGCGCGT--AT----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................GATTTGAGCTCGGATTCGGAG........................................................................................................................................................................................................................................................................................................................................................................2111.00101

Generated: 05/18/2015 at 05:35 PM