dsi_27659

CDS [2r_8738728_8740697_-]; exon [2r_8738728_8740697_-]; exon [2r_8737420_8738591_-]; CDS [2r_8738097_8738591_-]; intron [2r_8738592_8738727_-]; Antisense to intron [2r_8737383_8742717_+]

##################################################----------------------------------------------------------------------------------------------------------------------------------------################################################## CAATAGATGTTGAACAACAGGAAGAGGCGGCAGATAGCGAAGAAGGCGAGGTAAAATTCATAAAATAATATGTATAAATTTATCTAACCAGTTAACAAAAGATGAGCAACGAGTATTTCGGTTGGACGAGTTTTTTGGCGAAGTTTCAAAAGAACTGTTATAATAAAGTTTATTTATTTAATACAGGATGAATCGGATAGATCAATGGAGGACAGTGACTGCTCCGATCATTCCCA ************************************************....................(((((...(((((((..............)))))))((((..........))))(((.((((((((............)))))))))))..((((((.....))))))..))))).************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR618934 dsim w501 ovaries	SRR902009 testis	M023 head	O001 Testis	SRR553487 NRT_0-2 hours eggs	M025 embryo	SRR553485 Chicharo_3 day-old ovaries	SRR553486 Makindu_3 day-old ovaries	SRR553488 RT_0-2 hours eggs	M053 female body
..................................................................................................................................................................................TAATACAGGATGAATCGGATA.....................................	21	0	1	2.00	2	0	1	0	0	0	0	0	1	0	0
...................................................................................................................................................................................................................ACAGTGACTGCTCCGATCATT....	21	0	1	2.00	2	0	0	2	0	0	0	0	0	0	0
..........................................................................................................................TGGACGAGTTTTTTGGCGAAG.............................................................................................	21	0	1	1.00	1	0	0	0	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................ACTGCTCCGATCATTCCC.	18	0	1	1.00	1	0	0	0	1	0	0	0	0	0	0
..............................................................................................................................................................................................AATCGGATAGATCAATGGAGGACA......................	24	0	1	1.00	1	0	0	0	0	0	0	1	0	0	0
....................................................................................................................................................................................ATACAGGATGAATCGGATAGA...................................	21	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................GCACAGTGACTGCTCCGA.........	18	1	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...................................................................................................................................................................................................GATAGATCAATGGAGGACA......................	19	0	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................ATGGAGGGCAGTGACTGCT.............	19	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................ATAGATCAATGGAGGACA......................	18	0	1	1.00	1	0	0	0	0	0	1	0	0	0	0
..TTAGATGTGGAACAACAG........................................................................................................................................................................................................................	18	2	4	0.25	1	0	0	0	1	0	0	0	0	0	0
....................................................................................................................................TTTTGGCGTAGTTTGAAAA.....................................................................................	19	2	6	0.17	1	0	1	0	0	0	0	0	0	0	0
......................................GATGAAGGTGAGGTAAAACT..................................................................................................................................................................................	20	3	12	0.08	1	0	0	0	0	0	0	0	0	0	1
................................................................ATAATAGGTATAAATT............................................................................................................................................................	16	1	15	0.07	1	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................GAGGACATAGACTGCT.............	16	2	20	0.05	1	0	0	0	0	1	0	0	0	0	0
.....................................................................................................................................TTTGGCGAAGTTCCAGA......................................................................................	17	2	20	0.05	1	1	0	0	0	0	0	0	0	0	0
...........................................................................................................AACGTGTATTTCCGTTGTA..............................................................................................................	19	3	20	0.05	1	1	0	0	0	0	0	0	0	0	0
....AGATGTGGAACAACAGT.......................................................................................................................................................................................................................	17	2	20	0.05	1	1	0	0	0	0	0	0	0	0	0

GTTATCTACAACTTGTTGTCCTTCTCCGCCGTCTATCGCTTCTTCCGCTCCATTTTAAGTATTTTATTATACATATTTAAATAGATTGGTCAATTGTTTTCTACTCGTTGCTCATAAAGCCAACCTGCTCAAAAAACCGCTTCAAAGTTTTCTTGACAATATTATTTCAAATAAATAAATTATGTCCTACTTAGCCTATCTAGTTACCTCCTGTCACTGACGAGGCTAGTAAGGGT ************************************************....................(((((...(((((((..............)))))))((((..........))))(((.((((((((............)))))))))))..((((((.....))))))..))))).************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M025 embryo	M023 head	GSM343915 embryo	SRR553487 NRT_0-2 hours eggs	SRR553485 Chicharo_3 day-old ovaries	M024 male body
.................................................................................TAGATTGGTCAATTGTTTT........................................................................................................................................	19	0	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................TCACTGACGAGGCTAGTAAGG..	21	0	1	1.00	1	1	0	0	0	0	0
................................................................................GTAGATTGATCAATTGGTTTCT......................................................................................................................................	22	3	2	0.50	1	0	0	1	0	0	0
.........................................................................................................................................................................................................................TGTCGAGGCTAGTAA....	15	1	6	0.33	2	0	0	0	2	0	0
........................................................................................................................................CTGCTTCAAAGTGTTCT...................................................................................	17	2	16	0.19	3	0	0	0	2	1	0
..............................................................................................................................................CCAAGTTTTCTAGACAATG...........................................................................	19	3	19	0.05	1	1	0	0	0	0	0
..........................................................................................................................................................................................................GTTGGCTCCTGTCACAGAC...............	19	3	19	0.05	1	0	0	0	0	0	1

Species	Coordinate	ID	Alignment
droSim2	2r:8738542-8738777 -	dsi_27659	CAATAGA--------TGTTGAAC------AACAGG---------------------------------AAGAG------------GCGG---------------------------------------CAGATAGCGAAGAAGGCGAGGTAAAATT--CATAAA-ATAATATG--TA---------TAAATTTATCTAACCAGTTAAC--------AAAAGATGAGCAACGAGTATTTCGGTTGGACGAGTTTT-----TTGGC-GAAGTT-------------------TC-AA--AAGAACTGTTATAATAAA---------GTTTATTTA-TTTAATA----C--AGGATGAATCGGATAGATCA--A-TGGAGGACAGTGACTGCTCCGATCATTCCCA
droSec2	scaffold_1:5579689-5579930 -		CAATGGA--------TGTTGAGCAACAGGAGGATG---------------------------------AAGAG------------GCGG---------------------------------------CAGATAGCGAAGAAGGCGAGGTAAAATT--CATAAA-ATAATATG--TA---------TAAATTTATCTAACCAGTTAAC--------AAAAGATGAGCAACGAGTATTTCGGTTGGACTAGTTTT-----TTGGC-GAAGTC-------------------TC-AA--AAGAACTGTTATAATAAT---------GTTTATTTA-TTTAATA----C--AGGATGAATCGGATAGATCA--A-TGGAGGACAGTGACTGCTCCGATCATTCCCA
dm3	chr2R:8034652-8034895 -		CAATGGA--------CATTGATCAAGAGGAGGATG---------------------------------GAGAG------------GCGG---------------------------------------CAGATAGCGCCGAAGGCGAGGTAACATT--CATAAA-ATAATATGCATA---------TGCATTTATCTAACCAGCTAAA--------AAAAGATGAGCAACGTGTATTTCGGTTGGACGATTTTT-----TTGGC-GAAGTT-------------------TC-AA--TAGAGCTATTATAATAAA---------GTTTATTTA-TTTAACA----C--AGGATGAATCGGATAGATCA--A-TGGAGGGCAGTGACTGCTCCGATCATTCCCA
droEre2	scaffold_4845:17759481-17759708 +		CAGTGGA--------TGATGAGC---AAAAAGATG---------------------------------ATGAG------------GCTG---------------------------------------CAGATAGCGTCGAAGGCGAGGTAATATT--CATGAAAATAATATT--TA---------TTAATTTATCGAACCATTTAAA--------AGAAGATATGCAACGTGTCT-TTGGTTGGACGAGATTT-----TTG-T-GAAGTT-------------------TC-AA--AAGAGCTAT-------------------TTTTTATA-TTAAACA----C--AGGATGAATCGGATAGAGCA--A-TGGAGGAGAGTGACTACTCCGATAATTCCCA
droYak3	2R:8916545-8916776 +		CACTGGA--------TGAAGAGG------AGGATG---------------------------------AAGAG------------GCGG---------------------------------------CAGATAGCGTCGAAGGCGAGGTAACATT--CATGAA-ACTATA----TA---------TTAACTTATCTAACCT-TAAAA--------AAAATATGTGTAATGTGTCTTTTGGTTAGACGAGATTT-----GTG-T-GAAGTT-------------------TT-GA--AAGAGCTTTCATAATAAT---------GTTTATTTA-TTTAACA----C--AGGATGATTCGGATAGAGCA--A-TGGAGGAGAGCGACTACTCCGATCACTCCCA
droEug1	scf7180000409462:428930-429113 +		CACAGGA--------TGACCAAG---AGGAGGACG---------------------------------ATGAG------------GATG---------------------------------------AAAATAGCAATGAAGGCGAGGTAGGTTGT------------------AAAT--------------ATTTAACTTG---------------------------------TTCGGTTGGATT----TC-ATACA---T-ACAGTT-------------------TT-AG--AAG-----TTATAATA-T---------GTGCATTAC-TTTTATA----A--AGGATGAATCGGATGGCGTA--A-CGG---AGAGCAATTGCTCCGATCATTCCCA
droBia1	scf7180000302292:850577-850784 -		TACATGA--------TGATGAGC------AAGAGG---------------------------------AGGAG------------GAAG---------------------------------------CAGATAGCGTCAACGGCGAGGTAAGCCAA---CGAAT----------------------------------ACATAGGAA--------AT----TTAGAGATGTTGCTTACGTTTGACTGAGATCT-----TTG-TGTATTTT--------------------T-GA-AACGATTCCTTCTAATA-A---------GCGAATTTC-TTTTATA----T--AGGATGACTCGGATGGCGCA--A-CGGAGGAGAGTGAGAGCTCCCATCATTCCCA
droTak1	scf7180000415260:207547-207707 +		CACAGGA--------GGATGAAG------AAGATG---------------------------------AGGAG------------GATG---------------------------------------CAGATAGCGTCGAAGGCGAGGTAAGCTT--AAAGAATGCAGTTTT--TG---------CAGAGATATCTAACCAGTTAA-------------------------------------------------------------------------------------------------------------------------ATTTC-TCTAATT----C--AGGATGAATCGGATGGCGCA--A-CGGAGAAGAGCGAGTGCACCGATCATTCCCA
droEle1	scf7180000491214:3568103-3568321 -		CCCGGAG--------TAATGAGG---CAGAGGAAG---------------------------------AGGAG------------GACG---------------------------------------CGGATAGCGTTGATGGTGAAGTGAGTTTA------------------AATCATTTGAATAGAGAAACGAAACCAGGTGAA--------AGGAG-------AATTGGCTTTCAGCTGGTTAAGATTT-----CTA-T-GAAGC---------------------------------CAGTATTAATATTTTC-CCAT--CG---AT-TTTTTTG----C--AGGATGAATCGGAAGGTGCA--A-TGGAGGACAGCGAATGCTCCCGCCATTCCGC
droRho1	scf7180000779932:473643-473833 -		CGGAGGA--------CGAAGAGG------AGGAAG---------------------------------ATGAG------------GACG---------------------------------------CAGATAGCGTTGATGGAGAAGTAAGTTAT------------------ATCATTTA-------------AAACCAGCTGAA--------TGAAT--------------------------T----TC-TGTAA---T-ACAGCT-------------------TCTAA--AAGAGCCCTTATTAATAT---------ATTTAAATC-TTTAACG----C--AGGATGAATCGGATGGCGCT--G-CAGAGGAGAGCGACTGCTCCGATCATTCCGA
droFic1	scf7180000453809:431218-431388 -		TAATGAGAGGGAGGAGGTGGAAG------ATGATG---------------------------------AGGAG------------GATG---------------------------------------CAGAAAGCGACGAAGGCGAGGTTAGCTAT------------------AATTTATT-------------TAATCAA----------------------------------------------------CAGG---------TCAT-ATCAAGC------------AG-------------------------TTAA--CTTATCTT-TTCTATT----T--AGGATGAATCGGAAGGTGGA--A-CAGAGGAGAGCGACAGCTCCGAGCATTCCCA
droKik1	scf7180000302367:416835-417033 +		CACAAGG--------TGATGAGG------AAGAAG------ACG------------ACGAAGAGGAGGAGGAGGATGAGGAAGAGGCTA---------------------------------------TAGATAGCGTCGATGGCGAGGTGAGTAGCCCCTGAA----------------------------------------------------AAAAG-------GA---------------------TTC---------------------TTTTATATTT-----TA-TT-AAC----------AAT---------TATTTGTATTCTCTTGCGAC----T--AGGATGAAGCGGATGGTGCCAGAGCATCAGAGAGTGACTGCTCTGACCATTCCGA
droAna3	scaffold_13266:2590979-2591147 +		GAT-------------GATGAAC------AAAATGAAGAGGAGGAGGAACACATTGATGAACAGGAGGAGGAAGGAAAGGAAG------------------------------------------------------AGGTTGAAGAGGTGAGTTTT------------------CT---------TTTATT------------------------------------------------------TA-------TGGC---------CTGT-GTTTCGTT---------AT-TA--AA-----------------------------GTACT-CTTCATT----T--AGGAGGAAGTGGAT---------------GGTAGCGATAATTCCAATCAGATCGC
droBip1	scf7180000396759:1651971-1652114 +		GATA-------------CTGATG---------AAC---------------------------AGGAGGAGGAAGAA---------AA------------------------------------------CGATG---ATGTTGAAGAGGTGAGTTTC------------------GA-------------------------------TATATCCC-------------------------------------AAAAGC---------ATTT-GTTTCATTA---C-----------------------------TAAA-CTAC--CT---CT-CGTTTTT----T--AGGAGGAAGTGGAT---------------GGTAGCGATTATTCCAATCAGACCGC
dp5	3:392142-392296 -		AGGAG-----------------------GAGGATA---------------------------------ATGAT------------GCAG---------------------------------------CAGAAAGCACTGATGGAGAGGTAAATTGT------------------GG-------------------------------TGGCATAT-------------------------------------AAAAAC---------ATTT-ATTTTTATG---T-----------------------------TTTA-TCAT--TTTTATC-TTTATAG----C--AGTATGCAGAGCAAGGCACG--T-CTGAGGAGAGCGATTACTCTGACCATTCCGA
droPer2	scaffold_2:576554-576708 -		AGGAG-----------------------GAGGATA---------------------------------ATGAT------------GCAG---------------------------------------CAGAAAGCACTGATGGAGAGGTAAATTGT------------------GG-------------------------------TGGCATAT-------------------------------------AAAAAC---------ATTT-ATTTTTATG---T-----------------------------TTTA-TCAT--TTTTATC-TTTATAG----C--AGTATGCAGAGCAAGGCACG--T-CTGAGGAGAGCGATTACTCTGACCATTCCGA
droWil2	scf2_1100000004590:4685048-4685118 +		AAGAGGA--------GGAGGAAG------AAGAGG------AGG------------------------AGGAAGAAGAAGAAGAGGAGGAAGAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATGAATT---AACTATGT
droVir3	scaffold_12875:19852132-19852361 +		AGGAAGA--------AGAGGAGG------AGGAGGAGGAGGAGG------------------------AGGAGGACGAAGAAGAGGAGGAGGAAGACGAAGTTGACATGGAAAAAGCGGAGCCAGAGGCAACAAGTGAAGACGAAGAGGTGAGTGCT------------------AAGCTTT------------------------------ATAT---------------------------------------ATAT---------ATAT-AACATCC------------AGATA--A-C-------------TCAT-TCAT--GAATGTC-TTTAAATCATGCTTAGATGGAT-T--ATCAGCAG--A-GCGACGAAAGTGAAGGCACGACACAGTCGGA
droMoj3	scaffold_6496:6351693-6351900 -		TGAGG-A--GGA---GGCAGAAG---------AAG---AGGAGG------------------------AGGAGGATGAAGAAGAGGTCGAAGAAGAAG------------------CCGAGCAAGAGGCAGTAAGTGATTTTGAAGAGGCAAGTATT------------------TC---------T---------------------TCCCATAT-------------------------------------A-ATAC---------ATAT-GTATGCT-----------T-AAAA--T-C-------------TAAT-TAATGTGTGATTC-AATGATA----C--AGATGGATGTGGATCAGCAG--A-GTGTTGATAGTGAAAGTACAACGGAATCGAG
droGri2	scaffold_15245:18200637-18200824 +		GAAGAG-------------GAGG------AGCAGGAAGAGGAGG------------------------AGGAGGTAGAAGAGGAGCAGGAGGAGGAGGG---------GGAAGAACGGGAAGCTGATGCAGCGAGT---GATGAGGAGGTGAGTAGA------------------A-----------------------------------------------------------------------T----AG-TGCAA---T-ACAGTTTGCATCTAATG---AAATG--AG-------------------------TTTA--TTTATGTT-TTTGCCG----T--AG--------------------A-GTGATGAGAGCGAGTGCACAACGCAGTCG--

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

CAATAGA--------TGTTGAAC------AACAGG---------------------------------AAGAG------------GCGG---------------------------------------CAGATAGCGAAGAAGGCGAGGTAAAATT--CATAAA-ATAATATG--TA---------TAAATTTATCTAACCAGTTAAC--------AAAAGATGAGCAACGAGTATTTCGGTTGGACGAGTTTT-----TTGGC-GAAGTT-------------------TC-AA--AAGAACTGTTATAATAAA---------GTTTATTTA-TTTAATA----C--AGGATGAATCGGATAGATCA--A-TGGAGGACAGTGACTGCTCCGATCATTCCCA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
................................................................................................................................................................................................................................................................................................................................................TAATA----C--AGGATGAATCGGATA........................................	21	1	2.00	2	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................ACAGTGACTGCTCCGATCATT....	21	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TGGACGAGTTTT-----TTGGC-GAAG......................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................ACTGCTCCGATCATTCCC.	18	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................AATCGGATAGATCA--A-TGGAGGACA......................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................ATA----C--AGGATGAATCGGATAGA......................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................GATAGATCA--A-TGGAGGACA......................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................ATAGATCA--A-TGGAGGACA......................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

CAATGGA--------TGTTGAGCAACAGGAGGATG---------------------------------AAGAG------------GCGG---------------------------------------CAGATAGCGAAGAAGGCGAGGTAAAATT--CATAAA-ATAATATG--TA---------TAAATTTATCTAACCAGTTAAC--------AAAAGATGAGCAACGAGTATTTCGGTTGGACTAGTTTT-----TTGGC-GAAGTC-------------------TC-AA--AAGAACTGTTATAATAAT---------GTTTATTTA-TTTAATA----C--AGGATGAATCGGATAGATCA--A-TGGAGGACAGTGACTGCTCCGATCATTCCCA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.............................................................................................................................................................................................................................ATGAGCAACGAGTATTTCGG..................................................................................................................................................................	20	1	1.00	1	0	0	0	1
.....GA--------TGTTGAGCAACAGGAGGA..................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1
......................................................................................................................................................................................................................................................CTAGTTTT-----TTGGC-GAAGTC-------------------TC-AA--AAG.......................................................................................................	26	1	1.00	1	0	0	1	0

dm3

CAATGGA--------CATTGATCAAGAGGAGGATG---------------------------------GAGAG------------GCGG---------------------------------------CAGATAGCGCCGAAGGCGAGGTAACATT--CATAAA-ATAATATGCATA---------TGCATTTATCTAACCAGCTAAA--------AAAAGATGAGCAACGTGTATTTCGGTTGGACGATTTTT-----TTGGC-GAAGTT-------------------TC-AA--TAGAGCTATTATAATAAA---------GTTTATTTA-TTTAACA----C--AGGATGAATCGGATAGATCA--A-TGGAGGGCAGTGACTGCTCCGATCATTCCCA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
....................................................................................................................................................................................................................................................................................................................................................................TCGGATAGATCA--A-TGGAGGGC.......................	21	1	23.00	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................GAGAG------------GCGG---------------------------------------CAGATAGCGCCG.......................................................................................................................................................................................................................................................................	21	1	12.00	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................ATGAATCGGATAGATCA--A-TGG............................	21	1	12.00	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
CAATGGA--------CATTGATCAAGAGG......................................................................................................................................................................................................................................................................................................................................................................................	21	1	9.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............CATTGATCAAGAGGAGGATG---------------------------------G..............................................................................................................................................................................................................................................................................................................................................	21	1	9.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0
......A--------CATTGATCAAGAGGAGGATG---------------------------------...............................................................................................................................................................................................................................................................................................................................................	21	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................AATCGGATAGATCA--A-TGGAGG.........................	21	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................AAGAGGAGGATG---------------------------------GAGAG------------GCGG---------------------------------------...................................................................................................................................................................................................................................................................................	21	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.............................................................................................................................................................................................................................................................................................................................................................GGATGAATCGGATAGATCA--A-TGGA...........................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................GATAGCGCCGAAGGCGAGGAT............................................................................................................................................................................................................................................................	21	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................AGATAGCGCCGAAGGCGAGGAT............................................................................................................................................................................................................................................................	22	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................ATAGCGCCGAAGGCGAGGAT............................................................................................................................................................................................................................................................	20	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

CAGTGGA--------TGATGAGC---AAAAAGATG---------------------------------ATGAG------------GCTG---------------------------------------CAGATAGCGTCGAAGGCGAGGTAATATT--CATGAAAATAATATT--TA---------TTAATTTATCGAACCATTTAAA--------AGAAGATATGCAACGTGTCT-TTGGTTGGACGAGATTT-----TTG-T-GAAGTT-------------------TC-AA--AAGAGCTAT-------------------TTTTTATA-TTAAACA----C--AGGATGAATCGGATAGAGCA--A-TGGAGGAGAGTGACTACTCCGATAATTCCCA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
...............................GATG---------------------------------ATGAG------------GCTG---------------------------------------CAGATAGCG..........................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................A----C--AGGATGAATCGGATAGAGC....................................	21	1	1.00	1	0	0	0	0	1	0	0
..................................................................................................................................GATAGCGTCGAAGGCGAG...............................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0

droYak3

CACTGGA--------TGAAGAGG------AGGATG---------------------------------AAGAG------------GCGG---------------------------------------CAGATAGCGTCGAAGGCGAGGTAACATT--CATGAA-ACTATA----TA---------TTAACTTATCTAACCT-TAAAA--------AAAATATGTGTAATGTGTCTTTTGGTTAGACGAGATTT-----GTG-T-GAAGTT-------------------TT-GA--AAGAGCTTTCATAATAAT---------GTTTATTTA-TTTAACA----C--AGGATGATTCGGATAGAGCA--A-TGGAGGAGAGCGACTACTCCGATCACTCCCA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................GAGCA--A-TGGAGGAGAGCGACT................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....................AGG------AGGATG---------------------------------AAGAG------------GCGG---------------------------------------CA.................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
..................................G---------------------------------AAGAG------------GCGG---------------------------------------CAGATAGCGTCGAA.....................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

CACAGGA--------TGACCAAG---AGGAGGACG---------------------------------ATGAG------------GATG---------------------------------------AAAATAGCAATGAAGGCGAGGTAGGTTGT------------------AAAT--------------ATTTAACTTG---------------------------------TTCGGTTGGATT----TC-ATACA---T-ACAGTT-------------------TT-AG--AAG-----TTATAATA-T---------GTGCATTAC-TTTTATA----A--AGGATGAATCGGATGGCGTA--A-CGG---AGAGCAATTGCTCCGATCATTCCCA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

TACATGA--------TGATGAGC------AAGAGG---------------------------------AGGAG------------GAAG---------------------------------------CAGATAGCGTCAACGGCGAGGTAAGCCAA---CGAAT----------------------------------ACATAGGAA--------AT----TTAGAGATGTTGCTTACGTTTGACTGAGATCT-----TTG-TGTATTTT--------------------T-GA-AACGATTCCTTCTAATA-A---------GCGAATTTC-TTTTATA----T--AGGATGACTCGGATGGCGCA--A-CGGAGGAGAGTGAGAGCTCCCATCATTCCCA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CACAGGA--------GGATGAAG------AAGATG---------------------------------AGGAG------------GATG---------------------------------------CAGATAGCGTCGAAGGCGAGGTAAGCTT--AAAGAATGCAGTTTT--TG---------CAGAGATATCTAACCAGTTAA-------------------------------------------------------------------------------------------------------------------------ATTTC-TCTAATT----C--AGGATGAATCGGATGGCGCA--A-CGGAGAAGAGCGAGTGCACCGATCATTCCCA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CCCGGAG--------TAATGAGG---CAGAGGAAG---------------------------------AGGAG------------GACG---------------------------------------CGGATAGCGTTGATGGTGAAGTGAGTTTA------------------AATCATTTGAATAGAGAAACGAAACCAGGTGAA--------AGGAG-------AATTGGCTTTCAGCTGGTTAAGATTT-----CTA-T-GAAGC---------------------------------CAGTATTAATATTTTC-CCAT--CG---AT-TTTTTTG----C--AGGATGAATCGGAAGGTGCA--A-TGGAGGACAGCGAATGCTCCCGCCATTCCGC	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CGGAGGA--------CGAAGAGG------AGGAAG---------------------------------ATGAG------------GACG---------------------------------------CAGATAGCGTTGATGGAGAAGTAAGTTAT------------------ATCATTTA-------------AAACCAGCTGAA--------TGAAT--------------------------T----TC-TGTAA---T-ACAGCT-------------------TCTAA--AAGAGCCCTTATTAATAT---------ATTTAAATC-TTTAACG----C--AGGATGAATCGGATGGCGCT--G-CAGAGGAGAGCGACTGCTCCGATCATTCCGA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TAATGAGAGGGAGGAGGTGGAAG------ATGATG---------------------------------AGGAG------------GATG---------------------------------------CAGAAAGCGACGAAGGCGAGGTTAGCTAT------------------AATTTATT-------------TAATCAA----------------------------------------------------CAGG---------TCAT-ATCAAGC------------AG-------------------------TTAA--CTTATCTT-TTCTATT----T--AGGATGAATCGGAAGGTGGA--A-CAGAGGAGAGCGACAGCTCCGAGCATTCCCA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CACAAGG--------TGATGAGG------AAGAAG------ACG------------ACGAAGAGGAGGAGGAGGATGAGGAAGAGGCTA---------------------------------------TAGATAGCGTCGATGGCGAGGTGAGTAGCCCCTGAA----------------------------------------------------AAAAG-------GA---------------------TTC---------------------TTTTATATTT-----TA-TT-AAC----------AAT---------TATTTGTATTCTCTTGCGAC----T--AGGATGAAGCGGATGGTGCCAGAGCATCAGAGAGTGACTGCTCTGACCATTCCGA	Size	Hit Count	Total Norm	Total
No Reads

droAna3

GAT-------------GATGAAC------AAAATGAAGAGGAGGAGGAACACATTGATGAACAGGAGGAGGAAGGAAAGGAAG------------------------------------------------------AGGTTGAAGAGGTGAGTTTT------------------CT---------TTTATT------------------------------------------------------TA-------TGGC---------CTGT-GTTTCGTT---------AT-TA--AA-----------------------------GTACT-CTTCATT----T--AGGAGGAAGTGGAT---------------GGTAGCGATAATTCCAATCAGATCGC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
................GATGAAC------AAAATGAAGAGGAGGAGG....................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
...............................................AACACATTGATGAACAGGAGGAGA............................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0
.................................................................AGGAGGAAGGAAAGGAAG------------------------------------------------------AGGTT.....................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
..............................AAATGAAGAGGAGGAGGAAC.................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0

droBip1

GATA-------------CTGATG---------AAC---------------------------AGGAGGAGGAAGAA---------AA------------------------------------------CGATG---ATGTTGAAGAGGTGAGTTTC------------------GA-------------------------------TATATCCC-------------------------------------AAAAGC---------ATTT-GTTTCATTA---C-----------------------------TAAA-CTAC--CT---CT-CGTTTTT----T--AGGAGGAAGTGGAT---------------GGTAGCGATTATTCCAATCAGACCGC	Size	Hit Count	Total Norm	Total
No Reads

dp5

AGGAG-----------------------GAGGATA---------------------------------ATGAT------------GCAG---------------------------------------CAGAAAGCACTGATGGAGAGGTAAATTGT------------------GG-------------------------------TGGCATAT-------------------------------------AAAAAC---------ATTT-ATTTTTATG---T-----------------------------TTTA-TCAT--TTTTATC-TTTATAG----C--AGTATGCAGAGCAAGGCACG--T-CTGAGGAGAGCGATTACTCTGACCATTCCGA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................CAAGGCACG--T-CTGAGGAGAGC....................	21	1	3.00	3	0	3	0	0	0	0	0	0	0	0
..................................................................................................................................................AGGTAAATTGT------------------GG-------------------------------TGGCATAT-------------------------------------A.....................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	1	0
.....................................................................................GCAG---------------------------------------CAGAAAGCACTGATGGAGAGC..............................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................TGGAGAGGTAAATTGT------------------GG-------------------------------...................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	1	0
.............................AGGATA---------------------------------ATGAT------------GCAG---------------------------------------CAGAA..............................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..........................................................................................................................................TGATGGAGAGGTAAATTGT------------------GG-------------------------------A..................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0

droPer2

AGGAG-----------------------GAGGATA---------------------------------ATGAT------------GCAG---------------------------------------CAGAAAGCACTGATGGAGAGGTAAATTGT------------------GG-------------------------------TGGCATAT-------------------------------------AAAAAC---------ATTT-ATTTTTATG---T-----------------------------TTTA-TCAT--TTTTATC-TTTATAG----C--AGTATGCAGAGCAAGGCACG--T-CTGAGGAGAGCGATTACTCTGACCATTCCGA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
....................................................................................................................................................................................................................................................................................................................................................................................CTGAGGAGAGCGATTACTCTGACC.......	24	1	2.00	2	2	0	0	0	0	0

droWil2

AAGAGGA--------GGAGGAAG------AAGAGG------AGG------------------------AGGAAGAAGAAGAAGAGGAGGAAGAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATGAATT---AACTATGT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
......................................................................................AGGAAGAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATGAATT---AACT....	25	1	2.00	2	2	0	0	0	0
..............................AGAGG------AGG------------------------AGGAAGAAGAA....................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	1	1	0
..........................................................................AAGAAGAAGAGGAGGAAGAAGA...................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	1	1	0	0
...............................................................................GAAGAGGAGGAAGAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA...................	20	1	2.00	2	0	0	1	0	1
..................................................................................GAGGAGGAAGAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATGAATT---........	25	1	2.00	2	2	0	0	0	0
...........................................................................AGAAGAAGAGGAGGAAGAAGA...................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	1	1	0
.........................................................................GAAGAAGAAGAGGAGGAAGAA.....................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0
......................G------AAGAGG------AGG------------------------AGGAAGAAGAAGAA.................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0
...................GAAG------AAGAGG------AGG------------------------AGGAAGAAGAAGA..................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1
.....................AG------AAGAGG------AGG------------------------AGGAAGAAGA.....................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
.......................................................................AAGAAGAAGAAGAGGAGGAAGA......................................................................................................................................................................................................................................................................................................................	22	2	1.00	2	0	0	1	1	0
........................................................................AGAAGAAGAAGAGGAGGAAGAAG....................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
............................................................................GAAGAAGAGGAGGAAGAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAT................	26	1	1.00	1	0	0	1	0	0
...............................................................................GAAGAGGAGGAAGAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T....................	19	1	1.00	1	0	0	1	0	0
..................................G------AGG------------------------AGGAAGAAGAAGAAGAGGAGG..........................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0
...........................................................................AGAAGAAGAGGAGGAAGA......................................................................................................................................................................................................................................................................................................................	18	3	1.00	3	0	0	0	3	0
.........................................................................GAAGAAGAAGAGGAGGAAGAAGA...................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
..............................AGAGG------AGG------------------------AGGAAGAAGAAGA..................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1
...........................................................................AGAAGAAGAGGAGGAAGAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T....................	23	1	1.00	1	0	0	1	0	0
................................................................................AAGAGGAGGAAGAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T....................	18	1	1.00	1	0	0	0	1	0
...........................................................................AGAAGAAGAGGAGGAAGAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAT................	27	1	1.00	1	1	0	0	0	0
.....................AG------AAGAGG------AGG------------------------AGGAAGAAGAAGA..................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0
...........................................................................AGAAGAAGAGGAGGAAGAA.....................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0
.....................AG------AAGAGG------AGG------------------------AGGAAGAAG......................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0
..............................................................................AGAAGAGGAGGAAGAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA...................	21	1	1.00	1	0	0	1	0	0
.............................................................................AAGAAGAGGAGGAAGAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA...................	22	1	1.00	1	0	0	1	0	0
...............................................................................GAAGAGGAGGAAGAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATGAATT---........	28	1	1.00	1	0	0	1	0	0
...........................................................................AGAAGAAGAGGAGGAAGAAG....................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
..................................................................................GAGGAGGAAGAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA..................	18	1	1.00	1	0	0	1	0	0
.....................AG------AAGAGG------AGG------------------------AGGAAGAAGAA....................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1
.......................................................................AAGAAGAAGAAGAGGAGGAAGAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T....................	27	1	1.00	1	0	0	1	0	0
.....................................................................GGAAGAAGAAGAAGAGGAG...........................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	1	0	0	0
.....................................................................GGAAGAAGAAGAAGAGGAGGAA........................................................................................................................................................................................................................................................................................................................	22	2	0.50	1	0	0	1	0	0
..........................................................................AAGAAGAAGAGGAGGAAGA......................................................................................................................................................................................................................................................................................................................	19	3	0.33	1	0	0	0	0	1
...................GAAG------AAGAGG------AGG------------------------AGGAAGA........................................................................................................................................................................................................................................................................................................................................	20	4	0.25	1	0	0	1	0	0
..................GGAAG------AAGAGG------AGG------------------------AGGAA..........................................................................................................................................................................................................................................................................................................................................	19	5	0.20	1	0	0	1	0	0
............................................................................GAAGAAGAGGAGGAAGAAGA...................................................................................................................................................................................................................................................................................................................	20	11	0.18	2	0	0	2	0	0
......A--------GGAGGAAG------AAGAGG------AGG------------------------AGG............................................................................................................................................................................................................................................................................................................................................	21	6	0.17	1	0	1	0	0	0
..............................AGAGG------AGG------------------------AGGAAGAAGA.....................................................................................................................................................................................................................................................................................................................................	18	7	0.14	1	0	0	0	0	1
.AGAGGA--------GGAGGAAG------AAGA..................................................................................................................................................................................................................................................................................................................................................................................	18	7	0.14	1	0	0	0	0	1
........................................................................AGAAGAAGAAGAGGAGGA.........................................................................................................................................................................................................................................................................................................................	18	8	0.13	1	0	0	1	0	0
..............................................................................AGAAGAGGAGGAAGAAGA...................................................................................................................................................................................................................................................................................................................	18	12	0.08	1	0	0	1	0	0
.................AGGAAG------AAGAGG------AGG------------------------AGG............................................................................................................................................................................................................................................................................................................................................	18	13	0.08	1	0	0	0	1	0
..GAGGA--------GGAGGAAG------AAGAG.................................................................................................................................................................................................................................................................................................................................................................................	18	14	0.07	1	0	1	0	0	0

droVir3

AGGAAGA--------AGAGGAGG------AGGAGGAGGAGGAGG------------------------AGGAGGACGAAGAAGAGGAGGAGGAAGACGAAGTTGACATGGAAAAAGCGGAGCCAGAGGCAACAAGTGAAGACGAAGAGGTGAGTGCT------------------AAGCTTT------------------------------ATAT---------------------------------------ATAT---------ATAT-AACATCC------------AGATA--A-C-------------TCAT-TCAT--GAATGTC-TTTAAATCATGCTTAGATGGAT-T--ATCAGCAG--A-GCGACGAAAGTGAAGGCACGACACAGTCGGA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.........................................AGG------------------------AGGAGGACGAAGAAGAGGAGGAGGAAGACGAAGTTGACA........................................................................................................................................................................................................................................................................................................	42	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0
......................................................................GAGGACGAAGAAGAGGAGGAGGAAGACGAAGTTGACA........................................................................................................................................................................................................................................................................................................	37	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................G------------------------AGGAGGACGAAGAAGAGGAGGAGGAAGACGAAGTTGACA........................................................................................................................................................................................................................................................................................................	40	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................TTGACATGGAAAAAGCGGAGC.........................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................AGGAGGAGGAAGACGAAGTTGACA........................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
.......................................................................AGGACGAAGAAGAGGAGGAGGAAGACGAAGTTGACA........................................................................................................................................................................................................................................................................................................	36	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................AGGAGGACGAAGAAGAGGAGGAGGAAGACGAAGTTGACA........................................................................................................................................................................................................................................................................................................	39	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................AAAAAGCGGAGCCAGAGGCA.................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
....................................................................................GGAGGAGGAAGACGAAGTTGACA........................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................GAGGAAGACGAAGTTGACA........................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................CAAGTGAAGACGAAGAGGTGA...........................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TGGAAAAAGCGGAGCCAGAGGCAACA..............................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................AGGAGGAAGACGAAGTTGACA........................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................GAGG------------------------AGGAGGACGAAGAAGAGGAGGAGGAAGACGAAGTTGACA........................................................................................................................................................................................................................................................................................................	43	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................GACGAAGAAGAGGAGGAGGAAGA...................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................AGGAAGACGAAGTTGACA........................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
..........................................................................ACGAAGAAGAGGAGGAGGAAGACGAAGTTGACA........................................................................................................................................................................................................................................................................................................	33	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................GG------------------------AGGAGGACGAAGAAGAGGAGGAGGAAGACGAAGTTGACA........................................................................................................................................................................................................................................................................................................	41	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.......................................................................................................GACATGGAAAAAGCGGAGC.........................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................GAGG------AGGAGGAGGAGGAGG------------------------AGGAGGAC.......................................................................................................................................................................................................................................................................................................................................	27	3	0.67	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................GG------AGGAGGAGGAGGAGG------------------------AGGAGGA........................................................................................................................................................................................................................................................................................................................................	24	20	0.40	8	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0
..................GGAGG------AGGAGGAGGAGGAGG------------------------AGGA...........................................................................................................................................................................................................................................................................................................................................	24	20	0.40	8	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0
....................AGG------AGGAGGAGGAGGAGG------------------------AGGAGGAC.......................................................................................................................................................................................................................................................................................................................................	26	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....GA--------AGAGGAGG------AGGAGGAGGAGGAGG------------------------...............................................................................................................................................................................................................................................................................................................................................	25	3	0.33	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................GAGGAGG------AGGAGGAGGAGGAGG------------------------AGGAG..........................................................................................................................................................................................................................................................................................................................................	27	20	0.30	6	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0
...........................................................................................GAAGACGAAGTTGACC........................................................................................................................................................................................................................................................................................................	16	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................GAGG------AGGAGGAGGAGGAGG------------------------A..............................................................................................................................................................................................................................................................................................................................................	20	20	0.20	4	0	0	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................GAGGAGG------AGGAGGAGGAGGAGG------------------------A..............................................................................................................................................................................................................................................................................................................................................	23	20	0.20	4	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................AAGAAGAGGAGGAGGAAGA...................................................................................................................................................................................................................................................................................................................	19	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
................GAGGAGG------AGGAGGAGGAGGA.........................................................................................................................................................................................................................................................................................................................................................................	20	20	0.20	4	0	0	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................GAGG------AGGAGGAGGAGGAGG------------------------AGGAGGA........................................................................................................................................................................................................................................................................................................................................	26	20	0.15	3	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................GAGGAGG------AGGAGGAGGAGGAGG------------------------AGGA...........................................................................................................................................................................................................................................................................................................................................	26	20	0.15	3	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................AGGAGG------AGGAGGAGGAGGAGG------------------------AGGAG..........................................................................................................................................................................................................................................................................................................................................	26	20	0.15	3	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................GAGG------AGGAGGAGGAGGAGG------------------------AGGA...........................................................................................................................................................................................................................................................................................................................................	23	20	0.15	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....GA--------AGAGGAGG------AGGAGGAGGA............................................................................................................................................................................................................................................................................................................................................................................	20	15	0.13	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...............................GAGGAGGAGGAGG------------------------AGGAGGAC.......................................................................................................................................................................................................................................................................................................................................	21	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................GAGGAGG------AGGAGGAGGAGGAGG------------------------AGG............................................................................................................................................................................................................................................................................................................................................	25	20	0.10	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..............................GGAGGAGGAGGAGG------------------------AGGAGGA........................................................................................................................................................................................................................................................................................................................................	21	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
.....................GG------AGGAGGAGGAGGAGG------------------------AGGA...........................................................................................................................................................................................................................................................................................................................................	21	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
...................GAGG------AGGAGGAGGAGGAGG------------------------AGGAGG.........................................................................................................................................................................................................................................................................................................................................	25	20	0.10	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...............AGAGGAGG------AGGAGGAGGAGGAG........................................................................................................................................................................................................................................................................................................................................................................	22	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................GGAGG------AGGAGGAGGAGGAGG------------------------AG.............................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................GAGGAGG------AGGAGGAGGAGGAGG------------------------...............................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...................GAGG------AGGAGGAGGAGGAGG------------------------AGG............................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...................GAGG------AGGAGGAGGAGGA.........................................................................................................................................................................................................................................................................................................................................................................	17	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
.....................GG------AGGAGGAGGAGGAGG------------------------AGGAG..........................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................G------AGGAGGAGGAGGAGG------------------------AGGAGG.........................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
....................AGG------AGGAGGAGGAGGAGG------------------------AGGAGG.........................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................GAGG------AGGAGGAGGAGGAGG------------------------AGGAG..........................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................GGAGGAGGAGGAGG------------------------AGGA...........................................................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..................GGAGG------AGGAGGAGGAGGAGG------------------------AGGAGG.........................................................................................................................................................................................................................................................................................................................................	26	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................GAGGAGG------AGGAGGAGGAGGAGG------------------------AGGAGG.........................................................................................................................................................................................................................................................................................................................................	28	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
..................GGAGG------AGGAGGAGGAGGAGG------------------------A..............................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
.................................GGAGGAGGAGG------------------------AGGAGGA........................................................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...................GAGG------AGGAGGAGGAGGAG........................................................................................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............AGAGGAGG------AGGAGGAGGA............................................................................................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................GG------AGGAGGAGGAGGAGG------------------------A..............................................................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
................GAGGAGG------AGGAGGAGGAGGAGG------------------------AG.............................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

TGAGG-A--GGA---GGCAGAAG---------AAG---AGGAGG------------------------AGGAGGATGAAGAAGAGGTCGAAGAAGAAG------------------CCGAGCAAGAGGCAGTAAGTGATTTTGAAGAGGCAAGTATT------------------TC---------T---------------------TCCCATAT-------------------------------------A-ATAC---------ATAT-GTATGCT-----------T-AAAA--T-C-------------TAAT-TAATGTGTGATTC-AATGATA----C--AGATGGATGTGGATCAGCAG--A-GTGTTGATAGTGAAAGTACAACGGAATCGAG	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...........................................................................................................................................................................................................................................................................................................................TAAT-TAATGTGTGATTC-AA...................................................................	19	1	1.00	1	1	0	0	0	0	0
..................................G---AGGAGG------------------------AGGAGGATGAAGAAGA...............................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
.................................AG---AGGAGG------------------------AGGAGGATGAAGA..................................................................................................................................................................................................................................................................................................................................	21	2	0.50	1	1	0	0	0	0	0

droGri2

GAAGAG-------------GAGG------AGCAGGAAGAGGAGG------------------------AGGAGGTAGAAGAGGAGCAGGAGGAGGAGGG---------GGAAGAACGGGAAGCTGATGCAGCGAGT---GATGAGGAGGTGAGTAGA------------------A-----------------------------------------------------------------------T----AG-TGCAA---T-ACAGTTTGCATCTAATG---AAATG--AG-------------------------TTTA--TTTATGTT-TTTGCCG----T--AG--------------------A-GTGATGAGAGCGAGTGCACAACGCAGTCG--	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................AGAGCGAGTGCACAACGCAGTC...	22	1	1.00	1	1	0

dsi_27659

2r:8738592-8738727 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-14.4	-14.3	-14.3