ID:

dsi_27606

 Coordinate:

2r:8737383-8737532 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.8 -16.5 -16.5

Flybase annnotation

CDS [2r_8737161_8737382_+]; exon [2r_8737127_8737382_+]; Antisense to three_prime_UTR [2r_8737420_8738096_-]; Antisense to exon [2r_8737420_8738591_-]; intron [2r_8737383_8742717_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCTTCTTCCAGCTAATGCGTCGCATTGAGACAATAGAACATATTGGACTGGTAAGAGCTTGACTTCGACTGGAAATGAAACAGGCACAAGTTGATTGTTAAGGAAATACAATTCTAGTTTATTTCCGCTGCTGTTTATACACGCATATCCTAGCTTAGACTTTTATTGTTTTTATGAAATAACCATTATCTAGTTATATTAAATACTTTTTGAGGAGAGTATGTACCTGGCTGCATGAAATGTGGGTGAA
*****************************************************..((((((((.((((((..................))))))..)))).(((((((.(((....))))))))))..((((((....))).)))......))))*********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR902009
testis
 M024
male body		 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 O002
Head
 SRR902008
ovaries
 GSM343915
embryo
....................CGCATTGAGACAATAGAACAT................................................................................................................................................................................................................. 21 0 1 4.00 4 1 0 3 0 0 0 0 0 0 0 0 0 0
......TCCAGCTAATGCGTCGCATTG............................................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................................TTGGACTGGTAAGAGCTTGAC........................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 0 1 0 0 1 0 0 0 0
.......................................................................................................................................TATACACGCATATCCTAGCT............................................................................................... 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................CTAGTTTATTTCCGCTGCTGTA................................................................................................................... 22 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GAGGAGAGTATGTACCTGGCT.................. 21 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................ATTAAATACTTTTTGAGGAG................................. 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
......................CATTGAGACAATAGAACATAT............................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0
...................................................................................................................AGTTTATTTCCGCTGCTG..................................................................................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................ACGCATATCCTAGCTTAGACT......................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGAGCTTGACTTCGAGTG................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................AGGAGAGTATGTACCTGGCTG................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................ACAATAGAACATATTGGACTG........................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................AGAGTATGTACCTGGCTGCAT.............. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................AGAGCTTGACTTCGACTGGAA................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................CTTCGACTGGAAATGAAACAGGCA.................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGCTGCTGTTTATACACGCAT........................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................TGAGACAATAGAACATATTGG............................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................ATTGGACTGGTGAGAGCTTGA............................................................................................................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................TAGAACATATTGGACTGGTAAGAGCT............................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................GCTTGACTTCGACTGGAAATG............................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....CTTCCAGCTAATGCGTCGCAT................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................TAAGGAAATACAATTCTAGTT................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................GGCTGCATGAAATGTGGGTGA. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................GCTGTTTATACACGCATATCC.................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................ATTGAGACAATAGAACATATT.............................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................GAGAGTATGTACCTGGCTGCAA.............. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TGGCTGCATGAAATGTGGGTG.. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGTACCTGGCTGCATGAAATG........ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GGAGAGTATGTACCTGGCTGTAA.............. 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TTCTAGTTTATTTCCGCTGCT...................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................ACTTTTTGAGGAGAGTATGTA......................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................AGGAGAGTATGTACCT...................... 16 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................TTTTTGAGGAGAGTATGTACC....................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................CGCATATCCTAGCTTAGACT......................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
................................ATAGAACATATTGGACTGGTA..................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................AAACAGGCACAAGTTGATTGTT....................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TTGAGGAGAGTATGTACCTGGC................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................GTAAGAGCTTGACTTCGACT.................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................AGGAGAGTATGTACCTGGCTGTAA.............. 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TTAAGGAAATACAATTCTAGT.................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................ATTAAATACTTTTTGAGGAGA................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................CAATAGAACATATTGGACTGG....................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
................................................TGGTAAGAGCCTGAC........................................................................................................................................................................................... 15 1 4 1.00 4 0 0 0 0 0 1 0 3 0 0 0 0 0
.................................................TGTAAGAGTTAGACTTCGACTG................................................................................................................................................................................... 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................................................ACGGGTTGATTGTTGAGGAAA................................................................................................................................................ 21 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................CTGGTAAGAGCCTGAC........................................................................................................................................................................................... 16 1 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................ACTGGTAAGAGCCTGACC.......................................................................................................................................................................................... 18 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................GCTGGTAAGAGCCTGACT.......................................................................................................................................................................................... 18 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................GTTAGGGAAATACGATTTTAGT.................................................................................................................................... 22 3 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................AGTAGGTACCTGGCT.................. 15 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................GCTGGTAAGAGCCTGAC........................................................................................................................................................................................... 17 2 13 0.31 4 0 0 0 0 0 4 0 0 0 0 0 0 0
.......................................................................................................................TATGTCCGCTGCTGT.................................................................................................................... 15 1 20 0.25 5 0 0 0 0 0 0 5 0 0 0 0 0 0
................................................AGGAAAGAGCTTGACTTCGT...................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................CTGGTAAGAGCCTGACTGAG....................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................CTGGTAAGAGCCTGA............................................................................................................................................................................................ 15 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................AGCTGGTAAGAGCCTGACT.......................................................................................................................................................................................... 19 3 17 0.18 3 1 0 2 0 0 0 0 0 0 0 0 0 0
...............................................CTGGTAAGAGCCTGACCT......................................................................................................................................................................................... 18 2 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GAGAGTTTGTACCTGTC................... 17 2 10 0.10 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................AGCTGGTAAGAGCTTGACC.......................................................................................................................................................................................... 19 3 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TATGGCCGCTGCTGTTTA................................................................................................................. 18 2 14 0.07 1 0 0 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

---------------------------------------------------------------------------------------###################################################################################################################################################################
CGAAGAAGGTCGATTACGCAGCGTAACTCTGTTATCTTGTATAACCTGACCATTCTCGAACTGAAGCTGACCTTTACTTTGTCCGTGTTCAACTAACAATTCCTTTATGTTAAGATCAAATAAAGGCGACGACAAATATGTGCGTATAGGATCGAATCTGAAAATAACAAAAATACTTTATTGGTAATAGATCAATATAATTTATGAAAAACTCCTCTCATACATGGACCGACGTACTTTACACCCACTT
***********************************************************************************************..((((((((.((((((..................))))))..)))).(((((((.(((....))))))))))..((((((....))).)))......))))***************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 M024
male body		 O002
Head
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 O001
Testis
..............................................................................................................TAAGATCAAATAAAGGCGACGACAAAT................................................................................................................. 27 0 1 11.00 11 1 0 2 3 5 0 0 0 0 0 0
...................................................................................................................................................AGGATCGAATCTGAAAATAACAAAAAT............................................................................ 27 0 1 11.00 11 8 0 2 0 0 0 0 0 0 1 0
.................GCAGCGTAACTCTGTTATCTT.................................................................................................................................................................................................................... 21 0 1 7.00 7 0 5 0 0 0 0 2 0 0 0 0
......................................................CTCGAACTGAAGCTGACCTTT............................................................................................................................................................................... 21 0 1 6.00 6 0 4 0 0 0 0 2 0 0 0 0
...............................................................................................................AAGATCAAATAAAGGCGACGACAAAT................................................................................................................. 26 0 1 6.00 6 1 0 2 1 2 0 0 0 0 0 0
..............................................................................................................................CGACGACAAATATGTGCGTATAGGAT.................................................................................................. 26 0 1 3.00 3 0 0 1 0 0 2 0 0 0 0 0
.........................................................................................................................................ATGTGCGTATAGGATCGAATCTGAAA....................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................AGATCAATATAATTTATGAAAAACTCCT.................................. 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ATGTGCGTATAGGATCGAATCTGAAAAT..................................................................................... 28 0 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0
.....................................................TCTCGAACTGAAGCTGACCTTTA.............................................................................................................................................................................. 23 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
...................................................................................................................................................AGGATCGAATCTGAAAATAACAAAA.............................................................................. 25 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................TTATGTTAAGATCAAATAAAGGCGA......................................................................................................................... 25 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................GTTAAGATCAAATAAAGGCGA......................................................................................................................... 21 0 1 2.00 2 0 0 0 0 0 0 0 0 0 2 0
...........................................................................................................TGTTAAGATCAAATAAAGGC........................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTTAAGATCAAATAAAGGCG.......................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................ACAAATATGTGCGTATAGGAT.................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................................GACGTACTTTACACCCACT. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................CGACAAATATGTGCGTATAGGATCGAATCT........................................................................................... 30 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................CATGGACCGACGTACTTTAC........ 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
........................................................................................TCAACTAACAATTCCTTTAT.............................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................GTGCGTATAGGATCGAATC............................................................................................ 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................ACAATTCCTTTATGTTAAGATCAAATAA............................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.................GCAGCGTAACTCTGTTATCT..................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................ATCAATATAATTTATGAAAA........................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
....................................................................................................................................................GGATCGAATCTGAAAATAACAAAAAT............................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................................................................................................................................................TCTCATACATGGGCCGACGTA.............. 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................GACAAATATGTGCGTATAGGA................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................CTCTCATACATGGACCGACG................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................CATGGACCGACGTACTTTACA....... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................ATTATGTTAAGATCAAATAAAGGCGA......................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................ACTCTCTCATACATGGACCGACGT............... 24 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................TTCTCATACATGGACCGACGTA.............. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................CGACAAATATGTGCGTATAGGATCGA............................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CTCTCATACATGGACCGACGT............... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................GACCGACGTACTTTACACCCA... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................AAGATCAAATAAAGGCGACGACAAATAT............................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ATAGGATCGAATCTGAAAATAACAAAA.............................................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................AGGATCGAATCTGAAAATAACAAAAATACT......................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................AAATTCCTTTATGTTAAGAT...................................................................................................................................... 20 1 2 1.00 2 0 0 0 0 0 0 0 0 2 0 0
...........................................................ACTGAAGCTGACCTTTACTTT.......................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................................TAGGATCGAATCTGAAAATAAC.................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................GTGCGTATAGGATCGAATCTGAAAAT..................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................TAGGATCGAATCTGAAAATAA................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................AGGCGACGACAAATATGTGC........................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................GCGTATAGGATCGAATCTGAA........................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
...........................................................ACAGATGCTTACCTTTACTTTGT........................................................................................................................................................................ 23 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
..................................................................................................................................................TAGGATCGAATCTGAAAATGA................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................AATAAAGGCGTCGAGAACTA................................................................................................................ 20 3 9 0.22 2 0 0 0 2 0 0 0 0 0 0 0
.......................................................................................................................ATACAGGCGACGACA.................................................................................................................... 15 1 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0
.................................................................................................................................................................................................AATATAAGTTATGAAAA........................................ 17 1 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TGGACCCAAGTACTT........... 15 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:8737333-8737582 + dsi_27606 GCTTCTTCCAGCTAATGCGTCGCATTGAGACAATAGAACATATTGGACTGGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACTGGAAATGAAACAGGCAC--------------------------AAGTTGATTGTTAAGGAAATACAATTC-T----AGTTTA----TTTCCGCTGCT-GTTTATACACGC-----ATATCCTA-GCTTAGACTTTTATTG-------TTTTTATGAAAT---AACCA-TTATCTAGTT-------ATA-TTAAATACTTT-TT------GAGGAGAGTATGTACCTGGCT----------GCATGAAATGT-GGGTGAA
droSec2 scaffold_1:5578480-5578729 + GCTTCTTCCAGCTAATGCGTCGCATTGAGACAATAGAACATATTGGACTGGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACTGGAAATGAAACAGGCAC--------------------------AAGTTGATTGTTAAGGAAATACAATTC-T----AGTTTA----TTTCCGCTGCT-GTTTATACACGC-----ATATCCTA-GCTTAGACTTTTATTG-------TTTTTATGAAAT---AACCA-TTATCTAGTT-------ATA-TTAAATACTTT-TT------GAGGAGAGTATGTACCTGGCT----------GCATGAAATGT-GGGTGAA
dm3 chr2R:8033437-8033690 + GCTTCTTCCAGCTAATGCGTCGCATTGAGACCATAGAACATATTGGACTGGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACTGGTAATGAAACAGGCAC--------------------------AAGTTGATTGTTAAGGAAATACATTTC-T----AGTTTATTTATTTCCGCTGCT-GTTTATACACGC-----ATATCCTA-GCTTAGATTTGTATTG-------TTTTTATGAAAT---AACCA-TTATCTAGTT-------ATA-TTAAATACTTT-TT------GAGGAGAGTATGTACCTGGCT----------GCATGAAATGT-GGGTGAA
droEre2 scaffold_4845:17760671-17760924 - GCTTCTTCCAGCTAATGCGTCGCATTGAGACTATAGAACATATTGGACTGGTAAGAGCTT-GAG--------------------------------------------------------------------------------------------------------------CTTAGACTAGAAGTTAAACTAGCGC--------------------------AAGTTGATTGTTAAGGAAATACAATTC-T----AGTTTATTTATTTCCGCTGCT-GTTTATACACGC-----ATATCCTA-GCTTAGACTTTTATTG-------TTTTTATGAAAT---AACCA-TTATCTAGTT-------ATA-TTAAATACTT--TT------GAGGAGAGTATGTACCTGGCT----------GCATGAAATGT-GGGTGAA
droYak3 2R:8917728-8917993 - GCTTCTTCCAGCTAATGCGTCGCATCGAGACCATAGAACACATTGGACTGGTAAGAGCTT-GGG---------------------------------------------------------------------------CTGAGACT----A---GA-----------------CTTAGACTAGAAATGAAAATAGCAT--------------------------AAGTTGATTGTTAAGGAAATACAATTC-T----AGTTTATTTATATCCGCTGCT-GTTTATACACGC-----ATATCCTA-GCTTAGACTTGTATTG-------TTTTTATGAAAT---AACCA-TTATCTAGTT-------ATA-TTAAATACTTT-TT------GAGGAGAGTATGTACCTGGCT----------GCATGAAATGT-GGGTGAA
droEug1 scf7180000409462:430031-430297 - GACTTTTCCATCTAATGCGTCGCATAGAGAATATAGAAAATATTTTATTGGTAAGAATTTTTAT---------------------------------------------------------------------------AGAAATTCC---A---TGAC---CA----------------------AAGAA--AGGCAAA-CCAT---------------AT--TGTATTAATTGTTAAGGAAATACAATTC-T----ATTTTATTTATTTCCGCTGTT--TTTATACACGCA---TATATCCTA-ACTTAGAATTTTATCA-------TGTTTATGAAAT---AACCA-TTATCTAGTT-------ATA-TTAAATACTTT-TT------GAGGAGAGTATGTACCTGGTT----------GCATGAAATGT-GGGTGAA
droBia1 scf7180000302292:849357-849621 + GCTTCTTCCAGCTAATGCGTCGCATAGAAACAATAGAAAATATTGTGCTGGTAAGATATATTAT---------------------------------------------------------------------------TTGAGTCCCCTCAAACG-----------------------------AATGAAAC----A---AAAG---------------TT--AAGCTTAATTGTTAAGGAAATACAATTC-T----ATTTTATTTATTTCCGCTGCTTGTTTATACACGC-----GTATCCTA-GCTTAGACTTGTATCA-------TGTTTATGAAAT---AACCA-TTATCTAGGT-------ATA-TTAAATACTTT-TT------GAGGAGAGTATGTACCTGGCT----------GCATGAAATGT-GGGTGAA
droTak1 scf7180000415260:208599-208867 - AATTATTCCAGCTGATGCGTCGCATAGAGACAATAGAAAACATTCTACTGGTAAGATCCTTTAT---------------------------------------------------------------------------TTAAATCCC--TC---GGAT---CA---------------------AAGAAAA---------CTAG--------------TTT---CGATTAATTATTAAGGAAATACAATTC-T----ATTTTATTTATTTCCGCTGCTTGTTTATACACGC-----ATATCCTA-ACTTAGACTTGTATCA-----TGTGTTTATGAAAT---AACCA-TTATCTAGTTA---TGTATA-TTAAATACTTT-TT------GAGGAGAGTATGTACCTGGCT----------GCATGAAATGT-TGATGAA
droEle1 scf7180000491214:3566823-3567095 + GCTTTTTCCAGCTTATGCGTCGCATTGAGACAATAGAACAAATTCTACTGGTAAGCACTTTCAG---------------------------------------------------------------------------TTTGTTCTC-CCA---AAAT---TT------------------AGGAATAAG----ACT---CGACTTT------------CG--C-GATTAGTTATTAAGGAAATACAATTC-T----AATTTATTTATTTCCGCTGCTTGTTTATACACGCA-TATATATCCTA-GCTTAGACTTGTATCA-------TGTTTACGAAAT---AAC-T-TTATCTAGTT-------ATA-TTAAATACTT--TT------GAGGAGAGTATGTACCGGGCT----------GCATGAAATGT-GGGTGAA
droRho1 scf7180000779932:472441-472679 + ------------------------------CAATAGAAAATATTCTACTGGTAAAAGCTT-TAG---------------------------------------------------------------------------TTTATTCCA--CA---AGAT---CA----------------------ATGAAAAATAAA---CGAG---------------TT--CAGATTAGTTATTAAGGAAATACAATTC-T----ATTTTATTTATTTCCGCTGCTAGTTTATACACGCA-TATATATCCTA-ACTTAGACTTGTATCA-------TGTTTATCAAAT---AAC-T-TTATCTAGTT-------ATA-TTAAATACTT--TT------GAGGAGAGTATGTACCGGGCT----------GCATAAAATAT-GGGTGAA
droFic1 scf7180000453809:430021-430287 + GCTTTTTCCAGCTTATGCGTCGCATTGAGACGATAGAGAATATTCGACTGGTAAGACTGTTTAT---------------------------------------------------------------------------TAAGTTTTC--CA---GAAT---GA------------------AAAA-GCAAA---ACA---CAAG---------------TT--CAAATTAATAGTTAAGGAAATATAATTC-T----AATTTATTTATTTCCACTGCTTGTTTATACACGC-----ATAGCCTA-GCTTAGAT-TGTATCA-------TGTTTATGAAAT---AACCA-TTATCTAGTT-------ATA-TTAAATACTTT-TT------GAGGAGAGTATGTACCTGGCT----------GCATGAAATGT-GGGTGAA
droKik1 scf7180000302367:418013-418293 - GCCTTTTCCACCTAATGCGCCGCATCGAGACGATAGAAACCATTGTGCTGGTGAGCT-TG-GAT-----------------TTGG-------------------------------GAAACCTTTAGCCGAAAGCTTT----------------------------------------GTTTAGAG---AAA---------C-------------GC--CTGGGG-AAGTAATTTTTAAGGAAATACACTTC-T----TATTTATTGATTTCCGCTGGT---TTATACACAC---GCATATCCTA-GCTTAGACTTGTATCA--A----TGTTTACGAAAT---AAC-A-TTATCTAGTT-------ATA-TTAAATACTTG-TG------GAGGAGAGTATGCACCGTCAT--TCCTTC--GCATGAAATGTTGGCTGAA
droAna3 scaffold_13266:2592206-2592522 - GTTTCTTCCAACTAATGCGACGCATAGAAACAATTGAAAAGATTGTGATGGTAAGTC-TT-GAT-----------------TTTTAATTAAAACATTTCGGAATACACAGTGTCGGAGAGTATT------------TA------------------------------------------------GTTAAA---AAT---CAAATTTCAAAGACGTGGGTT--C-GGGTAATTGTTAAGGAAATACAATTC-T----AGTTTATTTATTTCCGCTGCTTGTTTATACAAGT-----AATTCCTA-ACTTAGATCTTTATCA--T----TGTTTATGAAGT---AACCA-TTATCTAATT------TATA-TTAAATACTTT-TT------GAGGAGAGTATGTACCTTGCTGTACCTTGCTTGATGAAATGT-TGTTGAA
droBip1 scf7180000396759:1653112-1653415 - GTTTCTTTCAGCTACTGCGCCGCATTGAAACAATTGAAAACATTACGATGGTATGTC-TT-GAT-----------------TTTGAATTAAAACATTTTTGAATACA---TGTTGGTGAATGTT------------TGGTT----TG--CA------GTAAATA------------------AAAA-TTAGA---------AGAC----------GT--GTT--C-GGGTAATTGTTAAGGAAATACAATTC-T----AATTTATTTATTTCCGCTGCTTGTTTATACAAGT-----AAATCCTA-ACTTAGACTTTTATCA-------TGTTTATGAAGT---AACCA-TTATCTAGTT-------ATA-TTAAATACTTT-TT------GAGGAGAATATGTACCTTGCT----------GCATGAAATGT-TGTTGAA
dp5 3:390932-391169 + GGTTCTTCCCCCTACTACGACGAATTGAGACGATTGAAAATATAGTTCTGGTAAGCA-TT-GAA-------------------------------------------------------------------------------ACT----CA---G-----------------------------CGTGAAAAAAGCGC---GGC----------GTTTTTT---AGGGACATTGTTAAGGAAACACGATTA-T----ATTTTATTTACTTCGGCTGTAT---------------CTGTATCCTA-TCTTAGACTGCTATCATAA----TAATTACGAAAT---AACCT-TTATCTATATA-TATATATA-TTAAATACTTTATT------GAGTAGAGTAT--ACCTTT-------------------------------
droPer2 scaffold_2:575343-575581 + GGTTCTTCCCCCTACTACGACGAATTGAGACGATTGAAAATATAGTTCTGGTAAGCA-TT-GAA-------------------------------------------------------------------------------ACT----CA---G-----------------------------CGTGAAAAAAGCGCGGCGTTTT------------TTT---AGGGACATTGTTAAGGAAACACGATTA-T----ATTTTATTTACTTCGGCTGTAT---------------CTGTATCCTA-TCTTAGACTGCTATCATAA----TAATTACGAAAT---AACCT-TTATCTATATA-TATATATA-TTAAATACTTTATT------GAGTAGAGTAT--ACCTTT-------------------------------
droWil2 scf2_1100000004954:3266634-3266757 - T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATGTTGCT-TTTTATACATAT---TTATATCCTAAGCTTAGACTTAAACAT-------TTTTTACGAAAT---AACCTTTTATCTAGTTTTTTTGTTTAGTTAAATACTTT-TTCTTCTTATGGAGACTATGTATC----------------------------------
droVir3 scaffold_12875:19853583-19853846 - dvi_8036 GACTCTTCCAGTTAATGCGACGCATCGAAACTATCGAACATATTCTGCAGGTTTGTA-AT-GCGATTAAGA------------------GCGCCATTTCCCTATAAA---TG--AGTTATTACT------------TGTTA----CG--T------GGTCAATA-TGG--------------GGAAATTAAACAGT-----TAGCTTA------------TA--T-AGGTAATCGTTAATGACATACAGTTTCTAGTTATTTTAT-----------------TTATATACGCAGTTTATAGCCTA-GCTTAAACTTA-ATAA--TTATG-TTTTATGCAATAATAACCT-TCATCTAGT-------------TAAATACTTT-TT--------------------------------------------------------
droMoj3 scaffold_6496:6350335-6350603 + GATTCTTCCAGCTGATGCGACGCATTGAAACTATCGAGAACATTTTGCAGGTATGTGAT--ACGTTTA-GACCATAATAACTTCCCGTTAAAGTTTA------------------------------CGTACATATTA-----------------------ATAGTGGTGGGAA----TTAC-------AAACAAGT----GATCTTT------------CT--T-GGGTAATTTTTAA-GACATATAATTTCTATTTATTTT-----------------ATTTATATACGCAGTTTAATTCCTA-GCTTAGGCCTA-GTAA--TTATG-ATTTATGCAATAATAACCTTTCATCTAGTTT-----TATA-GTAAATACTCT-TT--------------------------------------------------------
droGri2 scaffold_15245:18201835-18202088 - GACTTTTTCAATTAATGCGACGCATCGAAAATATTGAGCACGTCCTCCAGGTAGGTGTCT-CAA----------------TTTCCCATTTGACCTTG------------------------------TATGCCGATTT----------------------------------------GTTTAAAGATGTAT-----------TGTAT------------CT--T-GATTAATTGGTA--GACATACAGTTTCTAGGTATTTTATTTATATCCGCAGTT-----------------TATATCCTA-GCTTAGACTTTTATAA--TTATG-TTTTATGCAATAATAATCT-TCATCTAGTT-------ATA-GTAAATACTTT-TT------TT-------------TTTGT---------------------T-TTTTGAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCTTCTTCCAGCTAATGCGTCGCATTGAGACAATAGAACATATTGGACTGGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACTGGAAATGAAACAGGCAC--------------------------AAGTTGATTGTTAAGGAAATACAATTC-T----AGTTTA----TTTCCGCTGCT-GTTTATACACGC-----ATATCCTA-GCTTAGACTTTTATTG-------TTTTTATGAAAT---AACCA-TTATCTAGTT-------ATA-TTAAATACTTT-TT------GAGGAGAGTATGTACCTGGCT----------GCATGAAATGT-GGGTGAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................CGCATTGAGACAATAGAACAT................................................................................................................................................................................................................................................................................................................................................................................................................2114.00413000000000000000
......TCCAGCTAATGCGTCGCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000000000000000
..........................................TTGGACTGGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------C..........................................................................................................................................................................................................................................................................2112.00200000001100000000
...........................................................................................................................................................................................................................................................................................TATACACGC-----ATATCCTA-GCT....................................................................................................................................2012.00200000000000002000
...........................................................................................................................................................................................................................................................C-T----AGTTTA----TTTCCGCTGCT-GTA..............................................................................................................................................................2212.00200000000000002000
.......................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGAGTATGTACCTGGCT----------...................2112.00210000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................A-TTAAATACTTT-TT------GAGGAG............................................2012.00220000000000000000
......................CATTGAGACAATAGAACATAT..............................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000020000000000
..................................................................................................................................................................................................................................................................AGTTTA----TTTCCGCTGCT-G................................................................................................................................................................1812.00220000000000000000
................................................................................................................................................................................................................................................................................................ACGC-----ATATCCTA-GCTTAGACT..............................................................................................................................2111.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAGTATGTACCTGGCT----------G..................2111.00100000000000001000
.............................ACAATAGAACATATTGGACTG.......................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................AGAGTATGTACCTGGCT----------GCAT...............2111.00100010000000000000
.....................................................AGAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACTGGAA...............................................................................................................................................................................................................................................................2111.00100000010000000000
..............................................................................................................................................................................CTTCGACTGGAAATGAAACAGGCA...................................................................................................................................................................................................................................................2411.00101000000000000000
................................................................................................................................................................................................................................................................................CGCTGCT-GTTTATACACGC-----AT..............................................................................................................................................2111.00100001000000000000
.........................TGAGACAATAGAACATATTGG...........................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
.................................TAGAACATATTGGACTGGTAAGAGCT..............................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
........................................................GCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACTGGAAATG............................................................................................................................................................................................................................................................2111.00110000000000000000
....CTTCCAGCTAATGCGTCGCAT................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
............................................................................................................................................................................................................................................TAAGGAAATACAATTC-T----AGTT...................................................................................................................................................................................2111.00100001000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GGCT----------GCATGAAATGT-GGGTGA.2111.00100001000000000000
....................................................................................................................................................................................................................................................................................GCT-GTTTATACACGC-----ATATCC..........................................................................................................................................2111.00100001000000000000
.......................ATTGAGACAATAGAACATATT.............................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GAGAGTATGTACCTGGCT----------GCAA...............2211.00100000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGCT----------GCATGAAATGT-GGGTG..2111.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TGTACCTGGCT----------GCATGAAATG.........2111.00100000000000001000
.........................................................................................................................................................................................................................................................TTC-T----AGTTTA----TTTCCGCTGCT-.................................................................................................................................................................2111.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................ACTTT-TT------GAGGAGAGTATGTA....................................2111.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAGTATGTACCT.................................1611.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTT-TT------GAGGAGAGTATGTACC..................................2111.00100000010000000000
.................................................................................................................................................................................................................................................................................................CGC-----ATATCCTA-GCTTAGACT..............................................................................................................................2011.00100000000010000000
................................ATAGAACATATTGGACTGGTA....................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
.............................................................................................................................................................................................AAACAGGCAC--------------------------AAGTTGATTGTT............................................................................................................................................................................................................2211.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TT------GAGGAGAGTATGTACCTGGC..............................2211.00100001000000000000
..................................................GTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACT...................................................................................................................................................................................................................................................................2011.00100000100000000000
...........................................................................................................................................................................................................................................TTAAGGAAATACAATTC-T----AGT....................................................................................................................................................................................2111.00100001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................A-TTAAATACTTT-TT------GAGGAGA...........................................2111.00100000000100000000
..............................CAATAGAACATATTGGACTGG......................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000010000
droSec2
GCTTCTTCCAGCTAATGCGTCGCATTGAGACAATAGAACATATTGGACTGGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACTGGAAATGAAACAGGCAC--------------------------AAGTTGATTGTTAAGGAAATACAATTC-T----AGTTTA----TTTCCGCTGCT-GTTTATACACGC-----ATATCCTA-GCTTAGACTTTTATTG-------TTTTTATGAAAT---AACCA-TTATCTAGTT-------ATA-TTAAATACTTT-TT------GAGGAGAGTATGTACCTGGCT----------GCATGAAATGT-GGGTGAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......TCCAGCTAATGCGTCGCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020002
.....................................................................................................................................................................................................AC--------------------------AAGTTGATTGTTAAGGAAA.....................................................................................................................................................................................................2111.0011000
.....TTCCAGCTAATGCGTCGCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
................................................................................................................................................................................................................................................................................................................................................................................................T------GAGGAGAGTATGTACCTGGC..............................2111.0011000
..TTCTTCCAGCTAATGCGTCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
................................................................................................................................................................................................................................................................................................ACGC-----ATATCCTA-GCTTAGACT..............................................................................................................................2111.0011000
....CTTCCAGCTAATGCGTCGCAT................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
.....................................................................................................................................................................................................................................................................................................................................................................................................................CCTGGCT----------GCATGAAATGT-GGG....2111.0010001
.............................................................................................................................................................................................................................................................T----AGTTTA----TTTCCGCTGCT-GTT..............................................................................................................................................................2111.0010001
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGCT----------GCATGAAATGT-GGGTG..2111.0011000
.................................................GGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACT...................................................................................................................................................................................................................................................................2111.0011000
........CAGCTAATGCGTCGCATTGAG............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..........................................................................................................................................................................................................................................................................................................................................................................................................GAGAGTATGTACCTGGCT----------GCA................2111.0010010
.....................................ACATATTGGACTGGTAAGAGC...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................TTT-TT------GAGGAGAGTATGTACC..................................2111.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................TT------GAGGAGAGTATGTACCTGG...............................2111.0010100
......................................................................................................................................................................................................................................................CAATTC-T----AGTTTA----TTTCCGCT.....................................................................................................................................................................2111.0011000
...............................................CTGGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CCGA.......................................................................................................................................................................................................................................................................19110.0911000
dm3
GCTTCTTCCAGCTAATGCGTCGCATTGAGACCATAGAACATATTGGACTGGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACTGGTAATGAAACAGGCAC--------------------------AAGTTGATTGTTAAGGAAATACATTTC-T----AGTTTATTTATTTCCGCTGCT-GTTTATACACGC-----ATATCCTA-GCTTAGATTTGTATTG-------TTTTTATGAAAT---AACCA-TTATCTAGTT-------ATA-TTAAATACTTT-TT------GAGGAGAGTATGTACCTGGCT----------GCATGAAATGT-GGGTGAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................TT-TT------GAGGAGAGTATGTACCT.................................21132.00320000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001100000000000012110200000000000700020
..........................................................................................................................................................................................................................................................................................................................................................................................................GAGAGTATGTACCTGGCT----------GCA................21120.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100120000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010010
.............................................GACTGGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTC.......................................................................................................................................................................................................................................................................21119.00190000000000000000000000000010000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000001000000000000002000000000000000000001000000000000000000000000000000000000000000100000020000001010110000000000022000
..........................................TTGGACTGGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------C..........................................................................................................................................................................................................................................................................21117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000000000000000000000000000000145000000000000000000000000000000000000000000000000000000000000000000000030000000100000000000000001000
...........................................................................................................................................................................................................................................TTAAGGAAATACATTTC-T----AGT....................................................................................................................................................................................21116.001600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CAGCTAATGCGTCGCATTGAG............................................................................................................................................................................................................................................................................................................................................................................................................................21116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000090100000000000000000000010000000000000000000000000001000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000011000
...................................................................................................................................................................................................................................................................................................................CTTAGATTTGTATTG-------TTTTTA..........................................................................................................21116.001600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................ATGAAAT---AACCA-TTATCTAGT..................................................................................21111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................TAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACTGG.................................................................................................................................................................................................................................................................21111.00110000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000036000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CCAGCTAATGCGTCGCATTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................21110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000100000000000000000000010000000100010000000000030000
........................................................................................................................................................................................................................................................................................................................................................................................................................GGCT----------GCATGAAATGT-GGGTGA.2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000030100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000000000000000000000000000001000000000000000000000000000000000000000000000000010
.....................................ACATATTGGACTGGTAAGAGC...............................................................................................................................................................................................................................................................................................................................................................................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000100200000000000000000000000000000000000000000000000000000000001000002000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................TTGGACTGGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CT.........................................................................................................................................................................................................................................................................2218.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................................................................................................................................................TA-GCTTAGATTTGTATTG-------TTT.............................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000010
......................................CATATTGGACTGGTAAGAGCT..............................................................................................................................................................................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000000000000000000000000000000001000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................A-TTAAATACTTT-TT------GAGGAGA...........................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000240000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TCCTA-GCTTAGATTTGTATTG-------................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000000000000000000000112000
.............................................................................................................................................................................................AAACAGGCAC--------------------------AAGTTGATTGT.............................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010000000000000000000010000000000000000001000020000
........................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAGTATGTACCTGGCT----------G..................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000010
......................................................................................................................................................................................................................................GATTGTTAAGGAAATACATTT..............................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CCTGGCT----------GCATGAAATGT-GGG....2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001020
.........................................................................................................................................................................................................................................................................................TTTATACACGC-----ATATCCTA-GC.....................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000000
............................................................................................................................................................................................................................................................................................ATACACGC-----ATATCCTA-GCTTA..................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000020
....................................................................................................................................................................................................................................................................TTTATTTATTTCCGCTGCT-GT...............................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000010000000000000000010000000020
.....................................................................................................................................................................................................................................................................TTATTTATTTCCGCTGCT-GTT..............................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000100010
...............................................................................................................................................................................TTCGACTGGTAATGAAACAGG.....................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TTCTTCCAGCTAATGCGTCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000
.......................ATTGAGACCATAGAACATATT.............................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CCTA-GCTTAGATTTGTATTG-------T...............................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000010000000000000000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TT------GAGGAGAGTATGTACCTGG...............................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000020000000000000000000000010000000000000000000000000000
..................................................GTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACTG..................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
....CTTCCAGCTAATGCGTCGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TATTTATTTCCGCTGCT-GTTT.............................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000020
........................................TATTGGACTGGTAAGAGCTT-G...........................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................ATTGTTAAGGAAATACATTTC-............................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGAGTATGTACCTGGCT----------...................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
....................................AACATATTGGACTGGTAAGAG................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GGAGAGTATGTACCTGGCT----------GC.................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................ATACTTT-TT------GAGGAGAGTATG......................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
....................................................AAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACTGGT................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TTTCCGCTGCT-GTTTATACAC.......................................................................................................................................................2113.0030000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTT-TT------GAGGAGAGTATGTACC..................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000
...........................................TGGACTGGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CT.........................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000000000
.....TTCCAGCTAATGCGTCGCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCT----------GCATGAAATGT-GGGT...2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........AGCTAATGCGTCGCATTGAG............................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................TAAATACTTT-TT------GAGGAGAGT.........................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000
GCTTCTTCCAGCTAATGCGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................T------GAGGAGAGTATGTACCTGGCT----------...................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000200000000
..............................................................................................................................................................................................................................................................................TCCGCTGCT-GTTTATACACGC-----................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................TATTGGACTGGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------C..........................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CTTT-TT------GAGGAGAGTATGTAC...................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.............................................GACTGGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CT.........................................................................................................................................................................................................................................................................1912.0020000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................CACGC-----ATATCCTA-GCTTAGAT...............................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTGGCT----------GCATGAAATGT-.......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGCT----------GCATGAAATGT-GGGT...2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TT------GAGGAGAGTATGTACCTGGCT----------GC.................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACTGGTAATG............................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................C-T----AGTTTATTTATTTCCGCTG....................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...TCTTCCAGCTAATGCGTCGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGCT----------GCATGAAATGT-GG.....1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TTCCAGCTAATGCGTCGCATT...............................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TATCCTA-GCTTAGATTTGTAT.........................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000
......TCCAGCTAATGCGTCGCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000
............................................GGACTGGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CTT........................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000
.............................................................................................................................................................................................................................................................T----AGTTTATTTATTTCCGCTGC...................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.CTTCTTCCAGCTAATGCGTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................AGTTTATTTATTTCCGCTGCT-.................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010
....................................................................................................................................................................................................CAC--------------------------AAGTTGATTGTTAAGGAA......................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TT------GAGGAGAGTATGTACCT.................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
..........................................................................................................................................................................................................................................................TC-T----AGTTTATTTATTTCCGCT.....................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010
.................................................................................................................................................................................................................................................................................................CGC-----ATATCCTA-GCTTAGATTT.............................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................TATACACGC-----ATATCCTA-GCTT...................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TTGTATTG-------TTTTTATGAAAT---A................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.................................................GGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACT...................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GATTGTTAAGGAAATACATT...............................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................ATTTC-T----AGTTTATTTATTTCC........................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................ACGC-----ATATCCTA-GCTTAGATT..............................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................T------GAGGAGAGTATGTACCTGGC..............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
...................................GAACATATTGGACTGGTAAGA.................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000
........................................................................................................................................................................................................................................TTGTTAAGGAAATACATTTC-T----.......................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000000000000000000
...................................................TAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACTGGTA...............................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................ATTTCCGCTGCT-GTTTATACA........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................ATTGAGACCATAGAACATATTG............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................T-GA---------------------------------------------------------------------------------------------------------------CTTCGACTGGTAATGAAAC........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTGAGACCATAGAACATATTGG...........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................ATA-TTAAATACTTT-TT------GAGG..............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATTGAGACCATAGAACATATTGG...........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CTTCCAGCTAATGCGTCGCATT...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.................................................................................................................................................................................................................................................................................................CGC-----ATATCCTA-GCTTAGATT..............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGCT----------GCATGAAATGT-GGGTGT.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................GAAATACATTTC-T----AGTTTATT...............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................AATACTTT-TT------GAGGAGAGTAT.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TTGGACTGGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................ATTTC-T----AGTTTATTTATTTCCGCT.....................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................TTATTTATTTCCGCTGCT-GTTTATAC.........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TA-GCTTAGATTTGTATTG-------TTTT............................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....CTTCCAGCTAATGCGTCGCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................GCAC--------------------------AAGTTGATTGTTAAGGA.......................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CTTAGATTTGTATTG-------TTTTTAT.........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................AACAGGCAC--------------------------AAGTTGATTGTT............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGCTAATGCGTCGCATTGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TGGTAATGAAACAGGCAC--------------------------AAG.....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...................TCGCATTGAGACCATAGAACATATT.............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CTTT-TT------GAGGAGAGTATGTACC..................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................TTGAGACCATAGAACATATTG............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TTCCGCTGCT-GTTTATACACG......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................TACACGC-----ATATCCTA-GCTTAG.................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TTTCCGCTGCT-GTTTATACACG......................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TT------GAGGAGAGTATGTACCTGGC..............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TTAAATACTTT-TT------GAGGAGAG..........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGCT----------GCATGAAATGT-GGG....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGCT----------GCATGAAATGT-GGGTG..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CGCATTGAGACCATAGAACATATTG............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CCTA-GCTTAGATTTGTATTG-------................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................AGAGTATGTACCTGGCT----------GC.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................AAATACTTT-TT------GAGGAGAGTA........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.................................................................................................................................................................................................AGGCAC--------------------------AAGTTGATTGTTA...........................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................T-GTTTATACACGC-----ATATCCT.........................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................ACTTT-TT------GAGGAGAGTATGTA....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TT-GA---------------------------------------------------------------------------------------------------------------CTTCGACTGGTAATGAA..........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................CCATAGAACATATTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CGCATTGAGACCATAGAACATA...............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................AGAACATATTGGACTGGTAAG..................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................AGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACTGGTAAT.............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................ATTTC-T----AGTTTATTTATTTC.........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................ATTTATTTCCGCTGCT-GTTT.............................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................TTC-T----AGTTTATTTATTTCCG.......................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TG-------TTTTTATGAAAT---AACCA-TT.........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................CTTCGACTGGTAATGAAACAG......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGAGTATGTACCTGG...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..............................................ACTGGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCG......................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
................................ATAGAACATATTGGACTGGTA....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TTTATTTATTTCCGCTGCT-GTT..............................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................TACCTGGCT----------GCATGAAATGT-GGG....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................TGCT-GTTTATACACGC-----ATATCC..........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GAGTATGTACCTGGCT----------GCATG..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.............................................GACTGGTAAGAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCG......................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.......CCAGCTAATGCGTCGCATTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.........................TGAGACCATAGAACATATTGGACTGG......................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTT-TT------GAGGAGAGTATGTACCT.................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............AATGCGTCGCATTGAGACCAT.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACTGGTAT..............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TTTATTTCCGCTGCT-GTTTA............................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TTTATTTCCGCTGCT-GTTTAT...........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................GGAGAGTATGTACCTGGCT----------GCA................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TAGAACATATTGGACTGGTA....................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
GCTTCTTCCAGCTAATGCGTCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TA-TTAAATACTTT-TT------GAGGAGA...........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CCATAGAACATATTGGACTGG......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACTGGTGGA.............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TGTACCTGGCT----------GCATGAAATG.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........................................................................................................................................................................................................................................................................TATTTCCGCTGCT-GTTTATAC.........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................CACGC-----ATATCCTA-GCTTAGA................................................................................................................................2011.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGGCT----------GCATGAAATGT-GGG....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TTGATTGTTAAGGAAATACA.................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..........................GAGACCATAGAACATATTGG...........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TAATGAAACAGGCAC--------------------------AAGTTG..................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GAGCTT-GA---------------------------------------------------------------------------------------------------------------CTTCGACTGGTAA..............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AACATATTGGACTGGTAAGAGC...............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................................ATTTGTATTG-------TTTTTATGAA......................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................A-GCTTAGATTTGTATTG-------TTT.............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...................TCGCATTGAGACCATAGAACATATTGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................AGAGTATGTACCTGGCT----------GCAT...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CAGCTAATGCGTCGCATTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
droEre2
GCTTCTTCCAGCTAATGCGTCGCATTGAGACTATAGAACATATTGGACTGGTAAGAGCTT-GAG--------------------------------------------------------------------------------------------------------------CTTAGACTAGAAGTTAAACTAGCGC--------------------------AAGTTGATTGTTAAGGAAATACAATTC-T----AGTTTATTTATTTCCGCTGCT-GTTTATACACGC-----ATATCCTA-GCTTAGACTTTTATTG-------TTTTTATGAAAT---AACCA-TTATCTAGTT-------ATA-TTAAATACTT--TT------GAGGAGAGTATGTACCTGGCT----------GCATGAAATGT-GGGTGAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
GCTTCTTCCAGCTAATGCGTCGCATCGAGACCATAGAACACATTGGACTGGTAAGAGCTT-GGG---------------------------------------------------------------------------CTGAGACT----A---GA-----------------CTTAGACTAGAAATGAAAATAGCAT--------------------------AAGTTGATTGTTAAGGAAATACAATTC-T----AGTTTATTTATATCCGCTGCT-GTTTATACACGC-----ATATCCTA-GCTTAGACTTGTATTG-------TTTTTATGAAAT---AACCA-TTATCTAGTT-------ATA-TTAAATACTTT-TT------GAGGAGAGTATGTACCTGGCT----------GCATGAAATGT-GGGTGAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................GAAAT---AACCA-TTATCTAGTT-------..........................................................................2011.00101000000000
................................................................................................................................................................................................ATAGCAT--------------------------AAGTTGATTGTT............................................................................................................................................................................................................1911.00100000010000
.......................ATCGAGACCATAGAACACATT.............................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000
........................................................GCTT-GGG---------------------------------------------------------------------------CTGAGACT----A---GA-----------------CT.........................................................................................................................................................................................................................................................................2011.00110000000000
...................TCGCATCGAGACCATAGAACACATTGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................2911.00101000000000
droEug1
GACTTTTCCATCTAATGCGTCGCATAGAGAATATAGAAAATATTTTATTGGTAAGAATTTTTAT---------------------------------------------------------------------------AGAAATTCC---A---TGAC---CA----------------------AAGAA--AGGCAAA-CCAT---------------AT--TGTATTAATTGTTAAGGAAATACAATTC-T----ATTTTATTTATTTCCGCTGTT--TTTATACACGCA---TATATCCTA-ACTTAGAATTTTATCA-------TGTTTATGAAAT---AACCA-TTATCTAGTT-------ATA-TTAAATACTTT-TT------GAGGAGAGTATGTACCTGGTT----------GCATGAAATGT-GGGTGAASizeHit CountTotal NormTotal
No Reads
droBia1
GCTTCTTCCAGCTAATGCGTCGCATAGAAACAATAGAAAATATTGTGCTGGTAAGATATATTAT---------------------------------------------------------------------------TTGAGTCCCCTCAAACG-----------------------------AATGAAAC----A---AAAG---------------TT--AAGCTTAATTGTTAAGGAAATACAATTC-T----ATTTTATTTATTTCCGCTGCTTGTTTATACACGC-----GTATCCTA-GCTTAGACTTGTATCA-------TGTTTATGAAAT---AACCA-TTATCTAGGT-------ATA-TTAAATACTTT-TT------GAGGAGAGTATGTACCTGGCT----------GCATGAAATGT-GGGTGAASizeHit CountTotal NormTotal
No Reads
droTak1
AATTATTCCAGCTGATGCGTCGCATAGAGACAATAGAAAACATTCTACTGGTAAGATCCTTTAT---------------------------------------------------------------------------TTAAATCCC--TC---GGAT---CA---------------------AAGAAAA---------CTAG--------------TTT---CGATTAATTATTAAGGAAATACAATTC-T----ATTTTATTTATTTCCGCTGCTTGTTTATACACGC-----ATATCCTA-ACTTAGACTTGTATCA-----TGTGTTTATGAAAT---AACCA-TTATCTAGTTA---TGTATA-TTAAATACTTT-TT------GAGGAGAGTATGTACCTGGCT----------GCATGAAATGT-TGATGAASizeHit CountTotal NormTotal
No Reads
droEle1
GCTTTTTCCAGCTTATGCGTCGCATTGAGACAATAGAACAAATTCTACTGGTAAGCACTTTCAG---------------------------------------------------------------------------TTTGTTCTC-CCA---AAAT---TT------------------AGGAATAAG----ACT---CGACTTT------------CG--C-GATTAGTTATTAAGGAAATACAATTC-T----AATTTATTTATTTCCGCTGCTTGTTTATACACGCA-TATATATCCTA-GCTTAGACTTGTATCA-------TGTTTACGAAAT---AAC-T-TTATCTAGTT-------ATA-TTAAATACTT--TT------GAGGAGAGTATGTACCGGGCT----------GCATGAAATGT-GGGTGAASizeHit CountTotal NormTotal
No Reads
droRho1
------------------------------CAATAGAAAATATTCTACTGGTAAAAGCTT-TAG---------------------------------------------------------------------------TTTATTCCA--CA---AGAT---CA----------------------ATGAAAAATAAA---CGAG---------------TT--CAGATTAGTTATTAAGGAAATACAATTC-T----ATTTTATTTATTTCCGCTGCTAGTTTATACACGCA-TATATATCCTA-ACTTAGACTTGTATCA-------TGTTTATCAAAT---AAC-T-TTATCTAGTT-------ATA-TTAAATACTT--TT------GAGGAGAGTATGTACCGGGCT----------GCATAAAATAT-GGGTGAASizeHit CountTotal NormTotal
No Reads
droFic1
GCTTTTTCCAGCTTATGCGTCGCATTGAGACGATAGAGAATATTCGACTGGTAAGACTGTTTAT---------------------------------------------------------------------------TAAGTTTTC--CA---GAAT---GA------------------AAAA-GCAAA---ACA---CAAG---------------TT--CAAATTAATAGTTAAGGAAATATAATTC-T----AATTTATTTATTTCCACTGCTTGTTTATACACGC-----ATAGCCTA-GCTTAGAT-TGTATCA-------TGTTTATGAAAT---AACCA-TTATCTAGTT-------ATA-TTAAATACTTT-TT------GAGGAGAGTATGTACCTGGCT----------GCATGAAATGT-GGGTGAASizeHit CountTotal NormTotal
No Reads
droKik1
GCCTTTTCCACCTAATGCGCCGCATCGAGACGATAGAAACCATTGTGCTGGTGAGCT-TG-GAT-----------------TTGG-------------------------------GAAACCTTTAGCCGAAAGCTTT----------------------------------------GTTTAGAG---AAA---------C-------------GC--CTGGGG-AAGTAATTTTTAAGGAAATACACTTC-T----TATTTATTGATTTCCGCTGGT---TTATACACAC---GCATATCCTA-GCTTAGACTTGTATCA--A----TGTTTACGAAAT---AAC-A-TTATCTAGTT-------ATA-TTAAATACTTG-TG------GAGGAGAGTATGCACCGTCAT--TCCTTC--GCATGAAATGTTGGCTGAASizeHit CountTotal NormTotal
No Reads
droAna3
GTTTCTTCCAACTAATGCGACGCATAGAAACAATTGAAAAGATTGTGATGGTAAGTC-TT-GAT-----------------TTTTAATTAAAACATTTCGGAATACACAGTGTCGGAGAGTATT------------TA------------------------------------------------GTTAAA---AAT---CAAATTTCAAAGACGTGGGTT--C-GGGTAATTGTTAAGGAAATACAATTC-T----AGTTTATTTATTTCCGCTGCTTGTTTATACAAGT-----AATTCCTA-ACTTAGATCTTTATCA--T----TGTTTATGAAGT---AACCA-TTATCTAATT------TATA-TTAAATACTTT-TT------GAGGAGAGTATGTACCTTGCTGTACCTTGCTTGATGAAATGT-TGTTGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................TTTATTTATTTCCGCTGCTTG................................................................................................................................................................2111.001100000
.....................................................................................................................................................................................................T---CAAATTTCAAAGACGTGGGT............................................................................................................................................................................................................................2111.001100000
droBip1
GTTTCTTTCAGCTACTGCGCCGCATTGAAACAATTGAAAACATTACGATGGTATGTC-TT-GAT-----------------TTTGAATTAAAACATTTTTGAATACA---TGTTGGTGAATGTT------------TGGTT----TG--CA------GTAAATA------------------AAAA-TTAGA---------AGAC----------GT--GTT--C-GGGTAATTGTTAAGGAAATACAATTC-T----AATTTATTTATTTCCGCTGCTTGTTTATACAAGT-----AAATCCTA-ACTTAGACTTTTATCA-------TGTTTATGAAGT---AACCA-TTATCTAGTT-------ATA-TTAAATACTTT-TT------GAGGAGAATATGTACCTTGCT----------GCATGAAATGT-TGTTGAASizeHit CountTotal NormTotal
No Reads
dp5
GGTTCTTCCCCCTACTACGACGAATTGAGACGATTGAAAATATAGTTCTGGTAAGCA-TT-GAA-------------------------------------------------------------------------------ACT----CA---G-----------------------------CGTGAAAAAAGCGC---GGC----------GTTTTTT---AGGGACATTGTTAAGGAAACACGATTA-T----ATTTTATTTACTTCGGCTGTAT---------------CTGTATCCTA-TCTTAGACTGCTATCATAA----TAATTACGAAAT---AACCT-TTATCTATATA-TATATATA-TTAAATACTTTATT------GAGTAGAGTAT--ACCTTT-------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................TTACTTCGGCTGTAT---------------CTGTAT............................................................................................................................................2111.0010000000010
....................................................................................................................................................................................................................................GACATTGTTAAGGAAACACGA................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................TT---AGGGACATTGTTAAGGAAA.....................................................................................................................................................................................................2111.0010100000000
.GTTCTTCCCCCTACTACGACG...................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.............ACTACGACGAATTGAGACGA........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........................................................................................................................................................................................................................................................................TACTTCGGCTGTAT---------------CTGTATC...........................................................................................................................................2111.0010100000000
...................................................................................................................................................................................................................................GGACATTGTTAAGGAAACACG.................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................TTACTTCGGCTGTAT---------------CTGTATC...........................................................................................................................................2211.0010100000000
droPer2
GGTTCTTCCCCCTACTACGACGAATTGAGACGATTGAAAATATAGTTCTGGTAAGCA-TT-GAA-------------------------------------------------------------------------------ACT----CA---G-----------------------------CGTGAAAAAAGCGCGGCGTTTT------------TTT---AGGGACATTGTTAAGGAAACACGATTA-T----ATTTTATTTACTTCGGCTGTAT---------------CTGTATCCTA-TCTTAGACTGCTATCATAA----TAATTACGAAAT---AACCT-TTATCTATATA-TATATATA-TTAAATACTTTATT------GAGTAGAGTAT--ACCTTT-------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATGTTGCT-TTTTATACATAT---TTATATCCTAAGCTTAGACTTAAACAT-------TTTTTACGAAAT---AACCTTTTATCTAGTTTTTTTGTTTAGTTAAATACTTT-TTCTTCTTATGGAGACTATGTATC----------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................AT---TTATATCCTAAGCTTAGACT..............................................................................................................................2211.00110000
droVir3
GACTCTTCCAGTTAATGCGACGCATCGAAACTATCGAACATATTCTGCAGGTTTGTA-AT-GCGATTAAGA------------------GCGCCATTTCCCTATAAA---TG--AGTTATTACT------------TGTTA----CG--T------GGTCAATA-TGG--------------GGAAATTAAACAGT-----TAGCTTA------------TA--T-AGGTAATCGTTAATGACATACAGTTTCTAGTTATTTTAT-----------------TTATATACGCAGTTTATAGCCTA-GCTTAAACTTA-ATAA--TTATG-TTTTATGCAATAATAACCT-TCATCTAGT-------------TAAATACTTT-TT--------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................AATTAAACAGT-----TAGCTTA------------TA--T-AGGT...................................................................................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................ATATACGCAGTTTATAGCCTA-.......................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................TTA----CG--T------GGTCAATA-TGG--------------G..................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000100000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TAAACTTA-ATAA--TTATG-TTTT...........................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................AATGACATACAGTTTCTAGTT.......................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
..........................................TTCTGCAGGTTTGTA-AT-GCGA........................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TGCAATAATAACCT-TCATCTA....................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................TATATACGCAGTTTATAGCCT.........................................................................................................................................2111.001000000100000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TAATGACATACAGTTTCTAG.........................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000100
..........................................................................................................................CT------------TGTTA----CG--T------GGTCAATA-TGG--------------...................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................AAACAGT-----TAGCTTA------------TA--T-AGGT...................................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
......TCCAGTTAATGCGACGCATCGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TACGCAGTTTATAGCCTA-GCT....................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TAT-----------------TTATATACGCAGTTTATA.............................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................CGCAGTTTATAGCCTA-GCTTA..................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................T------------TGTTA----CG--T------GGTCAATA-TGG--------------GC.................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000100000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TTTATGCAATAATAACCT-TCA........................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................A-AT-GCGATTAAGA------------------GC..............................................................................................................................................................................................................................................................................................................................................................1530.331000000000000000000000000000000000000000000000000000000000100000
droMoj3
GATTCTTCCAGCTGATGCGACGCATTGAAACTATCGAGAACATTTTGCAGGTATGTGAT--ACGTTTA-GACCATAATAACTTCCCGTTAAAGTTTA------------------------------CGTACATATTA-----------------------ATAGTGGTGGGAA----TTAC-------AAACAAGT----GATCTTT------------CT--T-GGGTAATTTTTAA-GACATATAATTTCTATTTATTTT-----------------ATTTATATACGCAGTTTAATTCCTA-GCTTAGGCCTA-GTAA--TTATG-ATTTATGCAATAATAACCTTTCATCTAGTTT-----TATA-GTAAATACTCT-TT--------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.ATTCTTCCAGCTGATGCGACG...................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100
droGri2
GACTTTTTCAATTAATGCGACGCATCGAAAATATTGAGCACGTCCTCCAGGTAGGTGTCT-CAA----------------TTTCCCATTTGACCTTG------------------------------TATGCCGATTT----------------------------------------GTTTAAAGATGTAT-----------TGTAT------------CT--T-GATTAATTGGTA--GACATACAGTTTCTAGGTATTTTATTTATATCCGCAGTT-----------------TATATCCTA-GCTTAGACTTTTATAA--TTATG-TTTTATGCAATAATAATCT-TCATCTAGTT-------ATA-GTAAATACTTT-TT------TT-------------TTTGT---------------------T-TTTTGAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................................................................................................TGCCGATTT----------------------------------------GTTTAAAGATGT...........................................................................................................................................................................................................................................................2111.00101

Generated: 05/19/2015 at 12:34 PM