ID:

dsi_27605

Coordinate:

3l:7250466-7250615 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]

Legend:

mature

star

mismatch in read

Predicted structure

-15.1	-15.04	-15.0

Flybase annnotation

intergenic

No Repeatable elements found

mature

star

Sense Strand Reads

GAAAAGTGCTTGGATGTCATGAGACTTAAAATACATTTTAAATATATGTTTAATGTTTTGCGTGCTCATAAACCGCCAGTTTAAATGATCACATGAATTTTGAGCATAAGTAACCTAAAAAATACATATTTCACATAATATTCAATTGCCGTTATGTTTATTGTTTATTGAATTTGATAAATATTTGAAATCCTTTGCAGGATCGTTTCTGGCGCAAGAACCGTCATCGTTATGCGGGTCATTCCTGCTC ************************************************.......(((((((.((((((((.....)))))..))).)))((((((..(((((((((((((............(((((......)))))....))))..)))))))))..)))))).((.(((((.......))))).))....))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553487 NRT_0-2 hours eggs	SRR618934 dsim w501 ovaries	GSM343915 embryo	M024 male body	SRR553488 RT_0-2 hours eggs	M023 head
...............................................................................TTTAAATGATCACAT............................................................................................................................................................	15	0	2	0.50	1	0	1	0	0	0	0
.ACAAGTGCTTGGATGTCAT......................................................................................................................................................................................................................................	19	1	2	0.50	1	0	0	1	0	0	0
...........................................................................................CATGAATTTAGAGCAT...............................................................................................................................................	16	1	2	0.50	1	1	0	0	0	0	0
.................................................................................................................................................................................................TTTGCAGGATCTTTTTTGG......................................	19	2	8	0.13	1	0	0	0	0	1	0
........CTTGGACGTCGTAAGACT................................................................................................................................................................................................................................	18	3	20	0.10	2	0	0	0	0	0	2
..................................................................................................................................................................................................................AGCGTAAGAACCGTCGTCG.....................	19	3	11	0.09	1	0	0	0	1	0	0
.....................................................................................................................................................................................................................GTAAGAACCGTCGTCGTTT..................	19	3	11	0.09	1	0	0	0	1	0	0

Anti-sense strand reads

CTTTTCACGAACCTACAGTACTCTGAATTTTATGTAAAATTTATATACAAATTACAAAACGCACGAGTATTTGGCGGTCAAATTTACTAGTGTACTTAAAACTCGTATTCATTGGATTTTTTATGTATAAAGTGTATTATAAGTTAACGGCAATACAAATAACAAATAACTTAAACTATTTATAAACTTTAGGAAACGTCCTAGCAAAGACCGCGTTCTTGGCAGTAGCAATACGCCCAGTAAGGACGAG ************************************************.......(((((((.((((((((.....)))))..))).)))((((((..(((((((((((((............(((((......)))))....))))..)))))))))..)))))).((.(((((.......))))).))....))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553488 RT_0-2 hours eggs	SRR618934 dsim w501 ovaries
........................................................................................................................................................................................................................TCTTGGCAGTATCAAT..................	16	1	1	1.00	1	1	0
...................................................................................................................................................................AAATAACTTAAACTA........................................................................	15	0	6	0.17	1	1	0
...........................................................................GGTCGAATTTACTAGAGT.............................................................................................................................................................	18	2	11	0.09	1	0	1

Generated: 04/24/2015 at 02:20 AM