ID:

dsi_2758

 Coordinate:

2r:2310478-2310627 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.5 -7.3 -7.3

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
MAX_LTRLTRPao-

Sense Strand Reads

AAAAGCATTGGCCGCTTACACTGCCGCTCAACTGTTTGCGCCCTTCTGGCGTGAACAACAACTAAAAATATCCCTAACGCCTAATAAAAAAATGTTCATCGAAGTAGGAAACAAAACGGCGACTACTTGTCGATTGTATTAACACTCCTGAAAAATTACACATTTATTTTTATTAATAAGAACCTTAATTTCTTTTTCAGTTCAACAACCAAACCTGTCACATCCTTTCCATTTGCATGGTTACGGATTC
************************************************************************************.............((((((((((...............)))))..)))))..............****************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR618934
dsim w501 ovaries
 M053
female body
 O002
Head
 SRR902008
ovaries
 M025
embryo
 GSM343915
embryo
 SRR902009
testis
...........................TCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 26 0 20 309.80 6196 3501 0 1751 918 0 7 13 0 0 4 2 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 29 0 20 186.00 3720 1706 1627 386 0 0 1 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCGT...................................................................................................................................................................................................... 28 0 20 43.05 861 179 304 134 154 0 72 6 0 0 0 12 0
...........................TCAACTGTTTGCGCCCTTCTGG......................................................................................................................................................................................................... 22 0 20 20.30 406 78 140 91 81 0 6 4 0 5 1 0 0
.....................TGCCGCTCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 32 0 20 16.30 326 283 43 0 0 0 0 0 0 0 0 0 0
.........................GCTCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 28 0 20 15.65 313 111 143 21 35 0 0 2 0 0 0 1 0
.....................TGCCGCTCAACTGTTTGCGCCCTTC............................................................................................................................................................................................................ 25 0 20 14.60 292 10 15 26 30 0 26 181 0 4 0 0 0
.....................TGCCGCTCAACTGTTTGCGCCCTT............................................................................................................................................................................................................. 24 0 20 14.10 282 4 6 9 0 243 19 0 0 0 0 1 0
...........................TCAACTGTTTGCGCCCTTCTGGCGTGA.................................................................................................................................................................................................... 27 0 20 13.40 268 77 81 55 34 0 6 14 0 1 0 0 0
.....................TGCCGCTCAACTGTTTGCGCC................................................................................................................................................................................................................ 21 0 20 10.50 210 0 0 2 0 166 39 3 0 0 0 0 0
.....................TGCCGCTCAACTGTTTGCGCCCT.............................................................................................................................................................................................................. 23 0 20 10.00 200 3 5 22 24 0 48 14 81 2 0 1 0
...........................TCAACTGTTTGCGCCCTTCTGGCGT...................................................................................................................................................................................................... 25 0 20 9.70 194 43 41 34 29 0 42 4 0 0 0 1 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCGA...................................................................................................................................................................................................... 28 1 20 9.40 188 51 78 23 34 0 0 1 0 0 0 1 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCG....................................................................................................................................................................................................... 27 0 20 9.35 187 79 53 0 13 0 2 40 0 0 0 0 0
.....................TGCCGCTCAACTGTTTGCG.................................................................................................................................................................................................................. 19 0 20 8.65 173 0 0 0 0 170 3 0 0 0 0 0 0
..........................CTCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 27 0 20 8.20 164 46 81 18 19 0 0 0 0 0 0 0 0
.....................TGCCGCTCAACTGTTTGCGCCCTTCT........................................................................................................................................................................................................... 26 0 20 5.85 117 7 7 10 13 63 2 15 0 0 0 0 0
...............TTACACTGCCGCTCAACTGTTTGC................................................................................................................................................................................................................... 24 0 20 5.10 102 0 0 1 0 82 0 15 0 0 3 1 0
....................................................................................TAAAAAAATGTTCATCGAAGTAGGAA............................................................................................................................................ 26 0 1 5.00 5 1 3 0 0 0 1 0 0 0 0 0 0
.......TTGGCCGCTTACACTGCCGCTCA............................................................................................................................................................................................................................ 23 0 20 4.35 87 0 0 0 0 87 0 0 0 0 0 0 0
...............TTACACTGCCGCTCAACT......................................................................................................................................................................................................................... 18 0 20 4.35 87 0 0 0 0 87 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCGTGA.................................................................................................................................................................................................... 30 0 20 4.05 81 34 24 4 17 0 0 0 0 2 0 0 0
AAAAGCATTGGCCGCTTA........................................................................................................................................................................................................................................ 18 0 12 4.00 48 0 0 0 0 0 48 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCG....................................................................................................................................................................................................... 24 0 20 3.50 70 22 29 18 0 0 1 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGC........................................................................................................................................................................................................ 26 0 20 3.40 68 9 20 0 0 0 2 32 0 5 0 0 0
.....................TGCCGCTCAACTGTTTGCGCCCTTCTG.......................................................................................................................................................................................................... 27 0 20 2.00 40 0 4 15 11 0 0 10 0 0 0 0 0
....................................................................................TAAAAAAATGTTCATCGAAGTAGGA............................................................................................................................................. 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
..............................................TGGCGTGAACAACAACT........................................................................................................................................................................................... 17 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0
............................................................................................TGTTCATCGAAGTAGGAAACAAAACGGC.................................................................................................................................. 28 0 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0
.AAAGCATTGGCCGCTTA........................................................................................................................................................................................................................................ 17 0 12 1.75 21 0 0 0 0 0 21 0 0 0 0 0 0
..AAGCATTGGCCGCTTA........................................................................................................................................................................................................................................ 16 0 20 1.45 29 0 0 0 0 0 29 0 0 0 0 0 0
.................................GTTTGCGCCCTTCTGGCGT...................................................................................................................................................................................................... 19 0 20 1.40 28 0 0 0 0 0 28 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGG......................................................................................................................................................................................................... 25 0 20 1.35 27 0 1 1 1 0 0 24 0 0 0 0 0
.............................AACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 24 0 20 1.20 24 8 8 5 3 0 0 0 0 0 0 0 0
...............TTACACTGCCGCTCAACTGTTTGCGCC................................................................................................................................................................................................................ 27 0 20 1.10 22 0 6 0 0 0 0 16 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTG.......................................................................................................................................................................................................... 21 0 20 1.10 22 4 0 10 0 0 6 2 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCGTGAA................................................................................................................................................................................................... 28 0 20 1.05 21 0 0 0 0 0 0 19 0 1 1 0 0
........................CGCTCAACTGTTTGCGCCCTTCTG.......................................................................................................................................................................................................... 24 0 20 1.05 21 0 4 4 7 0 3 3 0 0 0 0 0
...........................................................................................................................TACTTGTCGATTGTATTAACACTCC...................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................TTTTCAGTTCAACAACCAAACCTGTCACA............................ 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................ACCGAAGTAGGAAACAAAACG.................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGC........................................................................................................................................................................................................ 23 0 20 1.00 20 4 7 0 4 0 5 0 0 0 0 0 0
...............................................................................................TCATCGAAGTAGGAAACAAAACGGC.................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................TGCATCGAAGTAGGAAACAAAAC..................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................TAATAAAAAAATGTTCATCGAAGTAGGA............................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................ACAACAACTAAAAATATCCCTAACGCC......................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................TTCATCGAAGTAGGAAACAAAACGGC.................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCTTT..................................................................................................................................................................................................... 29 2 20 1.00 20 3 2 6 9 0 0 0 0 0 0 0 0
......................................................................................................AGTAGGAAACAAAACGGCGACTACT........................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTATGGCGTG..................................................................................................................................................................................................... 26 1 20 1.00 20 0 14 0 6 0 0 0 0 0 0 0 0
...........................................................................................................................TACTTGTCGATTGTATTAACACTC....................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................AGTAGGAAACAAAACGGCGACTA............................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCA....................................................................................................................................................................................................... 24 1 20 0.95 19 2 4 3 6 0 0 1 0 3 0 0 0
........................CTCTCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 29 1 20 0.95 19 13 5 0 1 0 0 0 0 0 0 0 0
.....................TGCCGCTCAACTGTTTGCGC................................................................................................................................................................................................................. 20 0 20 0.95 19 0 0 0 2 0 16 0 0 0 0 1 0
AAAAGCATTGGCCGCTTAC....................................................................................................................................................................................................................................... 19 0 12 0.92 11 0 0 0 0 0 11 0 0 0 0 0 0
.....................TGCCGCTCAACTGTTTGCGCCCTTCTGGCGT...................................................................................................................................................................................................... 31 0 20 0.90 18 18 0 0 0 0 0 0 0 0 0 0 0
.............................AACTGTTTGCGCCCTTC............................................................................................................................................................................................................ 17 0 20 0.85 17 0 0 0 0 0 17 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCAA...................................................................................................................................................................................................... 28 2 20 0.85 17 1 6 0 1 0 0 0 0 9 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCTT...................................................................................................................................................................................................... 25 1 20 0.80 16 2 0 3 9 0 1 0 0 1 0 0 0
..................CACTGCCGCTCAACTGTTTGCGCCCT.............................................................................................................................................................................................................. 26 0 20 0.75 15 1 0 5 3 0 5 0 0 0 0 1 0
............CGCTTACACTGCCGCTCAACTGTT...................................................................................................................................................................................................................... 24 0 20 0.75 15 9 0 6 0 0 0 0 0 0 0 0 0
...........................GCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 26 1 20 0.70 14 10 4 0 0 0 0 0 0 0 0 0 0
.....................TGCCGCTCAACTGTTTGCGCCC............................................................................................................................................................................................................... 22 0 20 0.65 13 0 1 0 1 0 5 2 0 2 2 0 0
...........................ACAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 26 1 20 0.65 13 7 6 0 0 0 0 0 0 0 0 0 0
...............TTACACTGCCGCTCAACTGTTTGCG.................................................................................................................................................................................................................. 25 0 20 0.65 13 0 0 0 0 0 0 13 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCGTT..................................................................................................................................................................................................... 29 1 20 0.60 12 4 5 0 3 0 0 0 0 0 0 0 0
.....................TGCCGCTCAACTGTTTGCGCCCTTCTGGCGA...................................................................................................................................................................................................... 31 1 20 0.60 12 10 2 0 0 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCT........................................................................................................................................................................................................... 23 0 20 0.60 12 2 1 2 7 0 0 0 0 0 0 0 0
..................CACTGCCGCTCAACTGTTTGCGCCC............................................................................................................................................................................................................... 25 0 20 0.60 12 0 0 1 2 0 0 4 0 0 5 0 0
............................CAACTGTTTGCGCCCTTCTGG......................................................................................................................................................................................................... 21 0 20 0.55 11 3 0 1 3 0 1 1 0 2 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCTA...................................................................................................................................................................................................... 25 2 20 0.55 11 2 3 1 5 0 0 0 0 0 0 0 0
...................ACTGCCGCTCAACTGTTTGCGCCCT.............................................................................................................................................................................................................. 25 0 20 0.55 11 0 3 3 5 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCGA...................................................................................................................................................................................................... 25 1 20 0.55 11 3 0 3 4 0 0 1 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCA....................................................................................................................................................................................................... 27 1 20 0.55 11 0 3 2 6 0 0 0 0 0 0 0 0
......................GCCGCTCAACTGTTTGCGCCCTTC............................................................................................................................................................................................................ 24 0 20 0.50 10 0 0 0 0 0 0 10 0 0 0 0 0
...........................TCAACTGTTTGCCCCCTTCTGGCGTGA.................................................................................................................................................................................................... 27 1 20 0.50 10 0 0 10 0 0 0 0 0 0 0 0 0
..................CACTGCCGCTCAACTGTTTGCGCC................................................................................................................................................................................................................ 24 0 20 0.50 10 1 0 4 0 0 2 0 0 0 3 0 0
.....................TGCCGCTCAACTGTTT..................................................................................................................................................................................................................... 16 0 20 0.45 9 0 0 0 0 0 9 0 0 0 0 0 0
.....................TGCCGCTCAACTGTTTGCGCCCTTCTGGC........................................................................................................................................................................................................ 29 0 20 0.45 9 1 5 0 1 0 0 2 0 0 0 0 0
..............................ACTGTTTGCGCCCTTC............................................................................................................................................................................................................ 16 0 20 0.45 9 0 0 0 0 0 9 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCTTTCTGGCGTG..................................................................................................................................................................................................... 26 1 20 0.45 9 3 4 2 0 0 0 0 0 0 0 0 0
AAAAGCATTGGCCGCT.......................................................................................................................................................................................................................................... 16 0 12 0.42 5 0 0 0 0 0 5 0 0 0 0 0 0
...............TTACACTGCCGCTCAACTGTTTG.................................................................................................................................................................................................................... 23 0 20 0.40 8 1 2 0 0 0 0 5 0 0 0 0 0
..................CACTGCCGCTCAACTGTTTGCGC................................................................................................................................................................................................................. 23 0 20 0.40 8 0 1 3 3 0 1 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTC............................................................................................................................................................................................................ 19 0 20 0.40 8 2 0 0 0 0 6 0 0 0 0 0 0
........................AGCTCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 29 1 20 0.40 8 4 3 1 0 0 0 0 0 0 0 0 0
.........................GCTCAACTGTTTGCGCCCTTCTGGCG....................................................................................................................................................................................................... 26 0 20 0.40 8 3 0 0 0 0 1 4 0 0 0 0 0
.........................GCTCAACTGTTTGCGCCCTTCTGGCGA...................................................................................................................................................................................................... 27 1 20 0.40 8 0 5 2 1 0 0 0 0 0 0 0 0
..AAGCATTGGCCGCTTAC....................................................................................................................................................................................................................................... 17 0 20 0.40 8 0 0 0 0 0 8 0 0 0 0 0 0
.........................GCTCAACTGTTTGCGCCCTTCTGGC........................................................................................................................................................................................................ 25 0 20 0.40 8 1 0 0 0 0 2 4 0 1 0 0 0
................TACACTGCCGCTCAACTGTTTGCGCC................................................................................................................................................................................................................ 26 0 20 0.40 8 1 2 3 1 0 1 0 0 0 0 0 0
...........................TTAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 26 1 20 0.35 7 3 2 0 2 0 0 0 0 0 0 0 0
.............................AACTGTTTGCGCCCTTCTGGCGT...................................................................................................................................................................................................... 23 0 20 0.35 7 0 0 0 0 0 7 0 0 0 0 0 0
................TACACTGCCGCTCAACTGTTTGCGC................................................................................................................................................................................................................. 25 0 20 0.35 7 2 2 0 2 0 0 0 0 1 0 0 0
.AAAGCATTGGCCGCTTAC....................................................................................................................................................................................................................................... 18 0 12 0.33 4 0 0 0 0 0 4 0 0 0 0 0 0
.........................GCTCAACTGTTTGCGCCCTTCTGGCGT...................................................................................................................................................................................................... 27 0 20 0.30 6 2 3 0 1 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCTTTT.................................................................................................................................................................................................... 27 3 20 0.30 6 0 1 1 4 0 0 0 0 0 0 0 0
.....................TGCCGCTCAACTGTTTGC................................................................................................................................................................................................................... 18 0 20 0.30 6 0 0 0 0 0 5 0 0 0 1 0 0
........................CGCTCAACTGTTTGCGCCTTTCTGGCGTG..................................................................................................................................................................................................... 29 1 20 0.30 6 0 4 0 2 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCTA...................................................................................................................................................................................................... 28 2 20 0.30 6 1 2 2 1 0 0 0 0 0 0 0 0
...........................TGAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 26 1 20 0.30 6 3 3 0 0 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCGTC..................................................................................................................................................................................................... 29 1 20 0.30 6 1 3 0 2 0 0 0 0 0 0 0 0
............................CAACTGTTTGCGCCCTTCTGGCGTGA.................................................................................................................................................................................................... 26 0 20 0.30 6 2 0 3 1 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCGAT..................................................................................................................................................................................................... 29 2 20 0.30 6 0 5 0 1 0 0 0 0 0 0 0 0
......................GCCGCTCAACTGTTTGCGCCCTTCTGGCG....................................................................................................................................................................................................... 29 0 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCT....................................................................................................................................................................................................... 24 1 20 0.30 6 0 3 0 2 0 0 1 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGAAA...................................................................................................................................................................................................... 25 3 20 0.30 6 1 4 0 0 0 0 0 0 1 0 0 0
...........................TCAACTGTTTGTGCCCTTCTGGCGTG..................................................................................................................................................................................................... 26 1 20 0.30 6 0 1 3 2 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCC................................................................................................................................................................................................................ 18 0 20 0.30 6 0 0 0 0 0 6 0 0 0 0 0 0
.....................TGCCGCTCAACTGTTTGCGCCCTTCTGGCTT...................................................................................................................................................................................................... 31 1 20 0.25 5 0 5 0 0 0 0 0 0 0 0 0 0
........................CGTTCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 29 1 20 0.25 5 1 2 2 0 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCAT...................................................................................................................................................................................................... 25 1 20 0.25 5 1 1 0 2 0 0 1 0 0 0 0 0
..........................CTCAACTGTTTGCGCCCTTC............................................................................................................................................................................................................ 20 0 20 0.25 5 0 0 0 0 0 5 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGA........................................................................................................................................................................................................ 23 1 20 0.25 5 2 2 0 0 0 0 0 0 1 0 0 0
...............TTACACTGCCGCTCAACTGTTTGCGCCCT.............................................................................................................................................................................................................. 29 0 20 0.25 5 0 0 0 0 0 0 5 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGTAT...................................................................................................................................................................................................... 25 2 20 0.25 5 0 0 2 3 0 0 0 0 0 0 0 0
AAAAGCATTGGCCGCTTACAC..................................................................................................................................................................................................................................... 21 0 12 0.25 3 0 0 0 0 0 3 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGT........................................................................................................................................................................................................ 23 1 20 0.25 5 0 3 1 0 0 1 0 0 0 0 0 0
.................................GTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 20 0 20 0.20 4 0 0 0 0 0 4 0 0 0 0 0 0
................TACACTGCCGCTCAACTGTTTGCGCCC............................................................................................................................................................................................................... 27 0 20 0.20 4 1 0 0 0 0 1 0 0 1 1 0 0
.....................TGCCGCTCAACTGTT...................................................................................................................................................................................................................... 15 0 20 0.20 4 0 0 0 0 0 4 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCTAT..................................................................................................................................................................................................... 29 3 20 0.20 4 0 2 0 2 0 0 0 0 0 0 0 0
.................................GTTTGCGCCCTTCTGGCGTGA.................................................................................................................................................................................................... 21 0 20 0.20 4 0 0 1 1 0 2 0 0 0 0 0 0
...AGCATTGGCCGCTTA........................................................................................................................................................................................................................................ 15 0 20 0.20 4 0 0 0 0 0 4 0 0 0 0 0 0
..AAGCATTGGCCGCTTACA...................................................................................................................................................................................................................................... 18 0 20 0.20 4 0 0 0 0 0 4 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTAGCGTG..................................................................................................................................................................................................... 26 1 20 0.20 4 2 0 1 1 0 0 0 0 0 0 0 0
...........CCGCTTACACTGCCGCTCAACTGTT...................................................................................................................................................................................................................... 25 0 20 0.20 4 2 0 1 1 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGATA...................................................................................................................................................................................................... 25 3 20 0.20 4 1 0 0 3 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGAGTG..................................................................................................................................................................................................... 29 1 20 0.20 4 0 2 1 0 0 0 1 0 0 0 0 0
................................TGTTTGCGCCCTTCTGG......................................................................................................................................................................................................... 17 0 20 0.20 4 3 0 0 0 0 1 0 0 0 0 0 0
.....................TGCCGCTCAACTGTTTGCGCCCTTA............................................................................................................................................................................................................ 25 1 20 0.20 4 0 0 0 3 0 0 1 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGAGTG..................................................................................................................................................................................................... 26 1 20 0.20 4 3 0 1 0 0 0 0 0 0 0 0 0
.......................CCGCTCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 30 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0
........................CGCTTAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 29 1 20 0.20 4 1 3 0 0 0 0 0 0 0 0 0 0
...........................TCAGCTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 26 1 20 0.20 4 0 2 1 1 0 0 0 0 0 0 0 0
....GCATTGGCCGCTTAC....................................................................................................................................................................................................................................... 15 0 20 0.20 4 0 0 0 0 0 4 0 0 0 0 0 0
..............CTTACACTGCCGCTCAACTGTT...................................................................................................................................................................................................................... 22 0 20 0.20 4 0 0 1 3 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCTT...................................................................................................................................................................................................... 28 1 20 0.20 4 0 3 1 0 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCTTG..................................................................................................................................................................................................... 29 1 20 0.20 4 1 2 0 1 0 0 0 0 0 0 0 0
...................ACTGCCGCTCAACTGTTTGCGCCC............................................................................................................................................................................................................... 24 0 20 0.20 4 0 0 0 2 0 0 0 0 0 2 0 0
...........................TCAACTGTTTTCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 26 1 20 0.20 4 0 4 0 0 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGTCGTG..................................................................................................................................................................................................... 26 1 20 0.20 4 0 2 1 1 0 0 0 0 0 0 0 0
AAAAGCATTGGCCGC........................................................................................................................................................................................................................................... 15 0 12 0.17 2 0 0 0 0 0 2 0 0 0 0 0 0
AAAAGCATTGGCCGCTTACACTGCCGC............................................................................................................................................................................................................................... 27 0 12 0.17 2 0 0 1 0 0 1 0 0 0 0 0 0
.....................TGCCGCTCAACTGTTTGCGCCCTTCTGGCGTGA.................................................................................................................................................................................................... 33 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
.....................TGCCGCTCAACTGTTTGCGCCCTG............................................................................................................................................................................................................. 24 1 20 0.15 3 0 0 0 0 0 0 3 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCGATA.................................................................................................................................................................................................... 27 2 20 0.15 3 0 1 1 0 0 0 1 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTTTGGCGTG..................................................................................................................................................................................................... 26 1 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0 0
.............................AACTGTTTGCGCCCTTCTGGC........................................................................................................................................................................................................ 21 0 20 0.15 3 2 0 0 0 0 1 0 0 0 0 0 0
........................CGCTCAACTGATTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 29 1 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCAT...................................................................................................................................................................................................... 28 1 20 0.15 3 0 1 0 2 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGA......................................................................................................................................................................................................... 22 1 20 0.15 3 0 2 0 0 0 0 0 0 1 0 0 0
.......TTGGCCGCTTACACTGCCGCTCAACTGTT...................................................................................................................................................................................................................... 29 0 20 0.15 3 1 1 0 1 0 0 0 0 0 0 0 0
.....................TTCCGCTCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 32 1 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGAA....................................................................................................................................................................................................... 24 2 20 0.15 3 0 0 0 0 0 1 0 0 2 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCTAC..................................................................................................................................................................................................... 29 3 20 0.15 3 1 2 0 0 0 0 0 0 0 0 0 0
........................GGCTCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 29 1 20 0.15 3 0 2 0 1 0 0 0 0 0 0 0 0
..........................CTCAACTGTTTGCGCCCTTCTGGCGT...................................................................................................................................................................................................... 26 0 20 0.15 3 0 2 0 0 0 1 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTATGGCGTGA.................................................................................................................................................................................................... 27 1 20 0.15 3 0 2 1 0 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCGAT..................................................................................................................................................................................................... 26 2 20 0.15 3 1 2 0 0 0 0 0 0 0 0 0 0
............................CAACTGTTTGCGCCCTTCTGGC........................................................................................................................................................................................................ 22 0 20 0.15 3 1 1 0 0 0 0 1 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTATGGCGTG..................................................................................................................................................................................................... 29 1 20 0.15 3 1 0 0 2 0 0 0 0 0 0 0 0
...................ACTGCCGCTCAACTGTTTGCGCCCTTC............................................................................................................................................................................................................ 27 0 20 0.15 3 0 0 0 1 0 0 2 0 0 0 0 0
....................CTGCCGCTCAACTGTTTGCGCCCT.............................................................................................................................................................................................................. 24 0 20 0.15 3 0 1 0 0 0 1 1 0 0 0 0 0
...........................TCAACTGTTTGTGCCCTTCTGGCGTGA.................................................................................................................................................................................................... 27 1 20 0.15 3 0 0 2 1 0 0 0 0 0 0 0 0
..........................CTCAACTGTTTGCGCCCTTCTGGC........................................................................................................................................................................................................ 24 0 20 0.15 3 0 1 1 0 0 0 1 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGACT...................................................................................................................................................................................................... 25 2 20 0.15 3 0 1 0 2 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCATT..................................................................................................................................................................................................... 26 2 20 0.15 3 2 1 0 0 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCGTGT.................................................................................................................................................................................................... 30 1 20 0.15 3 0 0 1 2 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTTCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 29 1 20 0.15 3 0 2 1 0 0 0 0 0 0 0 0 0
......................GCCGCTCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 31 0 20 0.15 3 2 0 0 1 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCAC...................................................................................................................................................................................................... 25 2 20 0.15 3 1 1 0 1 0 0 0 0 0 0 0 0
.....................TGCCGCTCAACTGTTTGCGCCCTTCTGGAA....................................................................................................................................................................................................... 30 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCGTCT.................................................................................................................................................................................................... 30 2 20 0.15 3 1 1 0 1 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTGCTGGCGTG..................................................................................................................................................................................................... 29 1 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGTT....................................................................................................................................................................................................... 24 2 20 0.15 3 0 1 0 0 0 1 1 0 0 0 0 0
................................TGTTTGCGCCCTTCTGGCGTGA.................................................................................................................................................................................................... 22 0 20 0.15 3 1 0 2 0 0 0 0 0 0 0 0 0
..................CACTGCCGCTCAACTGTTTGC................................................................................................................................................................................................................... 21 0 20 0.15 3 0 1 0 0 0 2 0 0 0 0 0 0
........................CGCTCAACTGTTTGCCCCCTTCTG.......................................................................................................................................................................................................... 24 1 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGCCGTG..................................................................................................................................................................................................... 29 1 20 0.10 2 0 0 0 1 0 0 1 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTTGCGTG..................................................................................................................................................................................................... 29 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
.........................GCTCAACTGTTTGCGCCCTTCTGGAA....................................................................................................................................................................................................... 26 2 20 0.10 2 0 0 0 0 0 0 0 0 1 0 0 1
............................CAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 25 0 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0
..........................CTCAACTGTTTGCGCCCTTCTGGCG....................................................................................................................................................................................................... 25 0 20 0.10 2 1 0 0 0 0 0 1 0 0 0 0 0
..........................CTCAACTGTTTGCGCCCTTCTGG......................................................................................................................................................................................................... 23 0 20 0.10 2 0 0 0 1 0 1 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCGTT..................................................................................................................................................................................................... 26 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................TCTCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 28 1 20 0.10 2 1 1 0 0 0 0 0 0 0 0 0 0
...............................CTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 22 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0
.....................TGCCGCTCAACTGTTTGCGCCCTTCA........................................................................................................................................................................................................... 26 1 20 0.10 2 1 0 0 1 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGGGCCCTTCTGGCGTG..................................................................................................................................................................................................... 26 1 20 0.10 2 0 0 1 1 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTTGCGTG..................................................................................................................................................................................................... 26 1 20 0.10 2 0 1 1 0 0 0 0 0 0 0 0 0
......................GCCGCTCAACTGTTTGCGCCCTT............................................................................................................................................................................................................. 23 0 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0
............CGCTTACACTGCCGCTCAACTG........................................................................................................................................................................................................................ 22 0 20 0.10 2 0 0 0 0 0 0 0 0 2 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCTTG..................................................................................................................................................................................................... 26 1 20 0.10 2 1 1 0 0 0 0 0 0 0 0 0 0
......................GCCGCTCAACTGTTTGCGCCCT.............................................................................................................................................................................................................. 22 0 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0
..................CACTGCCGCTCAACTGTT...................................................................................................................................................................................................................... 18 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCCT...................................................................................................................................................................................................... 28 1 20 0.10 2 0 1 1 0 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCTACA.................................................................................................................................................................................................... 27 3 20 0.10 2 1 1 0 0 0 0 0 0 0 0 0 0
...........................CCAACTGTTTGCGCCCTTCTGGCGT...................................................................................................................................................................................................... 25 1 20 0.10 2 0 1 0 1 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGACA...................................................................................................................................................................................................... 25 3 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
........................CACTCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 29 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
................TACACTGCCGCTCAACTGTTTGC................................................................................................................................................................................................................... 23 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCTC...................................................................................................................................................................................................... 25 2 20 0.10 2 1 1 0 0 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGTCCTTCTGGCGT...................................................................................................................................................................................................... 28 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
....................CTGCCGCTCAACTGTTTGCGC................................................................................................................................................................................................................. 21 0 20 0.10 2 0 0 1 0 0 1 0 0 0 0 0 0
......................GCCGCTCAACTGTTTGCAC................................................................................................................................................................................................................. 19 1 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0
...AGCATTGGCCGCTTACACTGCCGC............................................................................................................................................................................................................................... 24 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0
...................................TTGCGCCCTTCTGGCGT...................................................................................................................................................................................................... 17 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCC............................................................................................................................................................................................................... 16 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0
..........................ATCAACTGTTTGCGCCCTTCTGGCGT...................................................................................................................................................................................................... 26 1 20 0.10 2 1 0 0 0 0 0 1 0 0 0 0 0
.............................AACTGTTTGCGCCCTTCTGG......................................................................................................................................................................................................... 20 0 20 0.10 2 1 0 0 0 0 1 0 0 0 0 0 0
..........................CTCAACTGTTTGCGCCCTTCTG.......................................................................................................................................................................................................... 22 0 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0
...........................TCGACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 26 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCCTC..................................................................................................................................................................................................... 26 2 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
................TACACTGCCGCTCAACTGTTTGCGCCCA.............................................................................................................................................................................................................. 28 1 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0
.....................TGCCGCTCAACTGTTTGCGCCCTTCTGG......................................................................................................................................................................................................... 28 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
............CGCTTACACTGCCGCTCAACT......................................................................................................................................................................................................................... 21 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCAGGCGTG..................................................................................................................................................................................................... 29 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCGAG..................................................................................................................................................................................................... 26 1 20 0.10 2 1 1 0 0 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGTC........................................................................................................................................................................................................ 26 1 20 0.10 2 0 1 0 0 0 0 1 0 0 0 0 0
........................CGCTCAACTGGTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 29 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGTATT..................................................................................................................................................................................................... 26 3 20 0.10 2 0 1 1 0 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCTCT..................................................................................................................................................................................................... 26 3 20 0.10 2 1 0 0 0 0 0 1 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGTCGTG..................................................................................................................................................................................................... 29 1 20 0.10 2 1 1 0 0 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCTCTTCTGGCGTG..................................................................................................................................................................................................... 29 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
.................................GTTTGCGCCCTTCTGGCG....................................................................................................................................................................................................... 18 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0
........................CGCTTAACTGTTTGCGCCCTTCTGGCGT...................................................................................................................................................................................................... 28 1 20 0.10 2 0 0 0 1 0 1 0 0 0 0 0 0
...............TTACACTGCCGCTCAACTGTT...................................................................................................................................................................................................................... 21 0 20 0.10 2 0 1 0 1 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCGCG..................................................................................................................................................................................................... 26 1 20 0.10 2 1 1 0 0 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCGTGC.................................................................................................................................................................................................... 30 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
........................CGCTCAACTTTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 29 1 20 0.10 2 0 1 1 0 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTGCTGGCGTG..................................................................................................................................................................................................... 26 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
..............CTTACACTGCCGCTCAACTGT....................................................................................................................................................................................................................... 21 0 20 0.10 2 0 0 0 0 0 1 1 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCGTGAAA.................................................................................................................................................................................................. 29 1 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0
...............................CTGTTTGCGCCCTTCTGGCGT...................................................................................................................................................................................................... 21 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0
...........................TCAACTGTTTGCGCTCTTCTGGCGTG..................................................................................................................................................................................................... 26 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
.........................CATCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 28 2 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
.........................GCGCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 28 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
...........................TCAACTGTATGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 26 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.....................TGCCGCTCAACTGTTTGCGCCCTCC............................................................................................................................................................................................................ 25 1 20 0.10 2 0 0 0 0 0 1 1 0 0 0 0 0
........................CGCTCAACTTTTTGCGCCCTTCTGGCGT...................................................................................................................................................................................................... 28 1 20 0.10 2 0 0 1 1 0 0 0 0 0 0 0 0
...........................TCAACGGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 26 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
........TGGCCGCTTACACTGCCGCTCAACTGTT...................................................................................................................................................................................................................... 28 0 20 0.10 2 1 0 0 1 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGTTA...................................................................................................................................................................................................... 25 3 20 0.10 2 1 0 0 1 0 0 0 0 0 0 0 0
.....................TGCCGCTCAACTGTTTGCCCCCTTCT........................................................................................................................................................................................................... 26 1 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0
........................CGCTGAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 29 1 20 0.10 2 0 1 0 1 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTCGCGTG..................................................................................................................................................................................................... 26 1 20 0.10 2 0 0 1 1 0 0 0 0 0 0 0 0
...........................CCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 26 1 20 0.10 2 1 0 1 0 0 0 0 0 0 0 0 0
....GCATTGGCCGCTTACA...................................................................................................................................................................................................................................... 16 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0
.......TTGGCCGCTTACACTGCCGCTCAACTGT....................................................................................................................................................................................................................... 28 0 20 0.10 2 0 0 1 1 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGTCT...................................................................................................................................................................................................... 25 2 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCTTC..................................................................................................................................................................................................... 29 2 20 0.10 2 1 0 0 1 0 0 0 0 0 0 0 0
..........................CTCAACTGTTTGCGCCCTTCT........................................................................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
..............................ACTGTTTGCGCCCTTCTGGCGT...................................................................................................................................................................................................... 22 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0
....GCATTGGCCGCTTACAC..................................................................................................................................................................................................................................... 17 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0
................................TGTTTGCGCCCTTCTG.......................................................................................................................................................................................................... 16 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0
...AGCATTGGCCGCTTACA...................................................................................................................................................................................................................................... 17 0 20 0.10 2 0 0 0 1 0 1 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCTTT..................................................................................................................................................................................................... 26 2 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGTGCCCTTCTGGCGTG..................................................................................................................................................................................................... 29 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGTATTA.................................................................................................................................................................................................... 27 3 20 0.10 2 0 0 1 1 0 0 0 0 0 0 0 0
.............................AACTGTTTGCGCCCTTCTGGCCT...................................................................................................................................................................................................... 23 1 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0 0
.........................GGTCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 28 1 20 0.10 2 0 1 0 1 0 0 0 0 0 0 0 0
AAAAGCATTGGCCGCTT......................................................................................................................................................................................................................................... 17 0 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
.AAAGCATTGGCCGCTTACT...................................................................................................................................................................................................................................... 19 1 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
AAAAGCATTGGCCGCTTACA...................................................................................................................................................................................................................................... 20 0 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
.AAAGCATTGGCCGCTTACA...................................................................................................................................................................................................................................... 19 0 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................CAATGTTCATCGGCGTAGG.............................................................................................................................................. 19 3 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
.AAAGCATTGGCCGCTTACAC..................................................................................................................................................................................................................................... 20 0 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
AAAAGCATTGGCCACTTA........................................................................................................................................................................................................................................ 18 1 13 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
.AGAGCATTGGCCGCTTAC....................................................................................................................................................................................................................................... 18 1 13 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
..............................................TGGCGTGAACAGAAACT........................................................................................................................................................................................... 17 2 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTAGCGT...................................................................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGGCT...................................................................................................................................................................................................... 28 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
...................ACTGCCGCTCAACTGTTTGCGCCCTTCT........................................................................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGT........................................................................................................................................................................................................ 26 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0
........................CGCTCAACTGTTTGCGCACTTCTGGCGTG..................................................................................................................................................................................................... 29 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...................ACTGCCGCTCAACTGTTTGCGCC................................................................................................................................................................................................................ 23 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGATT...................................................................................................................................................................................................... 25 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................GCTCAACTGTTTGCGCCCTTCTGGAAA...................................................................................................................................................................................................... 27 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCAGGCGT...................................................................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGTGTG..................................................................................................................................................................................................... 29 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................GCAACTGTTTGCGCCCTTCTGGCA....................................................................................................................................................................................................... 24 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................TCAACTGTTTGCCCCCTTCTGGCGTG..................................................................................................................................................................................................... 26 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................CCGCTCAACTGTTTGCGCCCTTCTGG......................................................................................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
......................GCCGCTCAACTGTTTGCGCCCTTCTGGCGT...................................................................................................................................................................................................... 30 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
....................CTGCCGCTCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 33 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
........................CGCTCACCTGTTTGCGCCCTTCTGGC........................................................................................................................................................................................................ 26 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
...........................TCAACTGTTTGCGCCCTTCTGGCAAC..................................................................................................................................................................................................... 26 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
.................ACACTGCCGCTCAACTGTTTGCGCCC............................................................................................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
.....................GGCCGCTCAACTGTTTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 32 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................CCGCTCAACTGTTTGCGCCCTTCTGGCGT...................................................................................................................................................................................................... 29 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
............................CAACTGTTTGCGCCCTTCTG.......................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGGCGTGAAC.................................................................................................................................................................................................. 32 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................GCTCAACTGTTTGCGCCCTTCTGGACA...................................................................................................................................................................................................... 27 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................TTGCGCCCTTCTGGCGTG..................................................................................................................................................................................................... 18 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
.........GGCCGCTTACACTGCCGCTCAACTGTA...................................................................................................................................................................................................................... 27 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
............CGCTAACACTGCCGCTCAACTGTTTGC................................................................................................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................TGCCGCTCAACTGTTTGCGCCCTTATGGCGT...................................................................................................................................................................................................... 31 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
........................CGCTCAACTGTTTGCGCCCTTCTGAAAT...................................................................................................................................................................................................... 28 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
..............CTTACACTGCCGCTCAACTGTTTGCGC................................................................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTTTCGTAACCGGCGAATGTGACGGCGAGTTGACAAACGCGGGAAGACCGCACTTGTTGTTGATTTTTATAGGGATTGCGGATTATTTTTTTACAAGTAGCTTCATCCTTTGTTTTGCCGCTGATGAACAGCTAACATAATTGTGAGGACTTTTTAATGTGTAAATAAAAATAATTATTCTTGGAATTAAAGAAAAAGTCAAGTTGTTGGTTTGGACAGTGTAGGAAAGGTAAACGTACCAATGCCTAAG
******************************************************************************************************.............((((((((((...............)))))..)))))..............************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 O002
Head
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 M053
female body
 SRR902009
testis
 GSM343915
embryo
.....GTAACCGGCGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 25 0 20 21.05 421 408 0 0 0 0 12 0 0 0 0 1 0
..............................TGACAAACGCGGGAAGACCGCACTTGT................................................................................................................................................................................................. 27 0 20 13.65 273 273 0 0 0 0 0 0 0 0 0 0 0
................................ACAAACGCGGGAAGACCGCACTTGT................................................................................................................................................................................................. 25 0 20 6.20 124 66 58 0 0 0 0 0 0 0 0 0 0
......TAACCGGCGAATGTGACGGCGAGTTG.......................................................................................................................................................................................................................... 26 0 20 4.40 88 1 87 0 0 0 0 0 0 0 0 0 0
.....................ACGGCGAGTTGACAAACG................................................................................................................................................................................................................... 18 0 20 4.30 86 0 0 0 86 0 0 0 0 0 0 0 0
............GCGAATGTGACGGCGAGTTGA......................................................................................................................................................................................................................... 21 0 20 4.20 84 0 84 0 0 0 0 0 0 0 0 0 0
..........CGGCGAATGTGACGGCGAGTTGACAA...................................................................................................................................................................................................................... 26 0 20 3.25 65 0 0 0 0 11 0 19 10 12 13 0 0
........ACCGGCGAATGTGACGGCGAGTTGA......................................................................................................................................................................................................................... 25 0 20 2.40 48 46 0 0 0 0 2 0 0 0 0 0 0
......................CGGCGAGTTGACAAACGCGGGAAGAC.......................................................................................................................................................................................................... 26 0 20 2.20 44 3 0 38 0 0 1 0 1 0 1 0 0
........ACCGGCGAATGTGACGGCGAGTTGACA....................................................................................................................................................................................................................... 27 0 20 1.45 29 29 0 0 0 0 0 0 0 0 0 0 0
....................................ACGCGGGAAGACCGCACTTGT................................................................................................................................................................................................. 21 0 20 1.20 24 24 0 0 0 0 0 0 0 0 0 0 0
..........CGGCGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 20 0 20 1.15 23 23 0 0 0 0 0 0 0 0 0 0 0
.......AACCGGCGAATGTGACGGCGAGTTGAC........................................................................................................................................................................................................................ 27 0 20 1.10 22 22 0 0 0 0 0 0 0 0 0 0 0
..........CGGCGAATGTGACGGCGAGTTGACA....................................................................................................................................................................................................................... 25 0 20 1.05 21 0 0 0 0 7 0 4 0 9 0 0 1
.......................................CGGGAAGACCGCACTTGTCGTACATTT........................................................................................................................................................................................ 27 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
....................................ACGCGGGAAGACCGCATTTGTTGT.............................................................................................................................................................................................. 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................ACGCGGGAAGACCGCACTTGTTGT.............................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
............................................................AGATTTTTATAGGGATTGCGGATTAT.................................................................................................................................................................... 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.........CCGGCGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 21 0 20 0.85 17 16 0 0 0 0 0 0 1 0 0 0 0
.........................CGAGTTGACAAACGCGGGAAGACCGCA...................................................................................................................................................................................................... 27 0 20 0.80 16 16 0 0 0 0 0 0 0 0 0 0 0
..............................TGACAAACGCGGGAAGACCGCA...................................................................................................................................................................................................... 22 0 20 0.70 14 14 0 0 0 0 0 0 0 0 0 0 0
.............CGAATGTGACGGCGAGTTGACAA...................................................................................................................................................................................................................... 23 0 20 0.65 13 13 0 0 0 0 0 0 0 0 0 0 0
.......AACCGGCGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 23 0 20 0.65 13 13 0 0 0 0 0 0 0 0 0 0 0
...............................GACAAACGCGGGAAGACCGCACTTGT................................................................................................................................................................................................. 26 0 20 0.60 12 12 0 0 0 0 0 0 0 0 0 0 0
...........GGCGAATGTGACGGCGAGTTG.......................................................................................................................................................................................................................... 21 0 20 0.55 11 11 0 0 0 0 0 0 0 0 0 0 0
..........CGGCGAATGTGACGGCGAGTTGAC........................................................................................................................................................................................................................ 24 0 20 0.50 10 10 0 0 0 0 0 0 0 0 0 0 0
.....ATAACCGGCGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 25 1 20 0.50 10 10 0 0 0 0 0 0 0 0 0 0 0
.....................................CGCGGGAAGACCGCACTTGT................................................................................................................................................................................................. 20 0 20 0.45 9 9 0 0 0 0 0 0 0 0 0 0 0
..........CGGCGAATGTGACGGCGAGTTGACAAA..................................................................................................................................................................................................................... 27 0 20 0.45 9 0 0 5 0 0 0 4 0 0 0 0 0
..........CGGCGAATGTGACGGCGAGTT........................................................................................................................................................................................................................... 21 0 20 0.45 9 8 0 0 0 0 0 0 1 0 0 0 0
.......................GGCGAGTTGACAAACGCGGGA.............................................................................................................................................................................................................. 21 0 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0 0
..............GAATGTGACGGCGAGTTGACAAA..................................................................................................................................................................................................................... 23 0 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0 0
.....GTAACCGGCGAATGTGACGGC................................................................................................................................................................................................................................ 21 0 20 0.35 7 7 0 0 0 0 0 0 0 0 0 0 0
.....................................CGCGGGAAGACCGCACTTG.................................................................................................................................................................................................. 19 0 20 0.35 7 7 0 0 0 0 0 0 0 0 0 0 0
.................................CAAACGCGGGAAGACCGCACTTGT................................................................................................................................................................................................. 24 0 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0 0
......TAACCGGCGAATGTGACGGCGAGTT........................................................................................................................................................................................................................... 25 0 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0 0
......................CGGCGAGTTGACAAACGCGGGAAGA........................................................................................................................................................................................................... 25 0 20 0.30 6 0 0 6 0 0 0 0 0 0 0 0 0
..........CGGCGAATGTGACGGCGAGTTG.......................................................................................................................................................................................................................... 22 0 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0 0
...ACGTAACCGGCGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 27 1 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0 0
.........................................GGAAGACCGCACTTG.................................................................................................................................................................................................. 15 0 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0 0
....TGTAACCGGCGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 26 1 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0 0
.........ACGGCGAATGTGACGGCGAGTTGACA....................................................................................................................................................................................................................... 26 1 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0 0
..............................TGACAAACGCGGGAAGACCG........................................................................................................................................................................................................ 20 0 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0 0
..........CGGCGAATGTGACGGCGAG............................................................................................................................................................................................................................. 19 0 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0 0
.......................GGCGAGTTGACAAACGCGGGAAGAC.......................................................................................................................................................................................................... 25 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0
....................................ACGCGGGAAGACCGCACTTGTTTTTT............................................................................................................................................................................................ 26 2 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0
.....GTAACCGGCGAATGTGACGGCGA.............................................................................................................................................................................................................................. 23 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0
................ATGTGACGGCGAGTTGACAA...................................................................................................................................................................................................................... 20 0 20 0.20 4 0 0 0 0 0 4 0 0 0 0 0 0
.........................CGAGTTGACAAACGCGGGAAGACCGCAC..................................................................................................................................................................................................... 28 0 20 0.20 4 0 0 0 0 2 0 0 0 2 0 0 0
....................................................................................................................................................................................................................................GGTAAACCTACCAATGGCGA.. 20 3 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................GGGAAGACCGCACTTGT................................................................................................................................................................................................. 17 0 20 0.20 4 2 0 0 0 0 0 0 2 0 0 0 0
......................CGGCGAGTTGACAAACGCGG................................................................................................................................................................................................................ 20 0 20 0.20 4 0 0 4 0 0 0 0 0 0 0 0 0
....CGTAACCGGCGAATGTGACGG................................................................................................................................................................................................................................. 21 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0
....CGTAACCGGCGAATGTGACGGCGA.............................................................................................................................................................................................................................. 24 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0
.........................CGAGTTGACAAACGCGGGAAGA........................................................................................................................................................................................................... 22 0 20 0.20 4 3 0 0 0 0 0 0 0 0 0 1 0
.......TACCGGCGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 23 1 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0
.......................GGCGAGTTGACAAACGCGGGAAGACCGC....................................................................................................................................................................................................... 28 0 20 0.15 3 0 0 0 0 0 3 0 0 0 0 0 0
..........................GAGTTGACAAACGCGGGAAGACCGCAC..................................................................................................................................................................................................... 27 0 20 0.15 3 2 0 1 0 0 0 0 0 0 0 0 0
....................GACGGCGAGTTGACAAACGCGG................................................................................................................................................................................................................ 22 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
.....GTAACCGGCGAATGTGACGTCGAGT............................................................................................................................................................................................................................ 25 1 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
.................TGTGACGGCGAGTTGACAAAC.................................................................................................................................................................................................................... 21 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
.......AACCGGCGAATGTGACGGC................................................................................................................................................................................................................................ 19 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
.........................CGAGTTGACAAACGCGGGAAGACCGC....................................................................................................................................................................................................... 26 0 20 0.15 3 2 0 0 0 0 1 0 0 0 0 0 0
...........................AGTTGACAAACGCGGGAAGACCGCAC..................................................................................................................................................................................................... 26 0 20 0.15 3 2 0 0 0 0 0 1 0 0 0 0 0
...........................AGTTGACAAACGCGGGAAGAC.......................................................................................................................................................................................................... 21 0 20 0.15 3 1 0 0 0 0 2 0 0 0 0 0 0
.......................................CGGGAAGACCGCACT.................................................................................................................................................................................................... 15 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
..............GAATGTGACGGCGAGTTGACA....................................................................................................................................................................................................................... 21 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
...TCGTAACCGGCGAATGTGACGGCGAG............................................................................................................................................................................................................................. 26 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
.....................ACGGCGAGTTGACAAACGCGGGAAGA........................................................................................................................................................................................................... 26 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
..........AGGCGAATGTGACGGCGAGTTGAC........................................................................................................................................................................................................................ 24 1 20 0.15 3 0 0 0 0 0 3 0 0 0 0 0 0
.......AACCGGCGAATGTGACGGCGA.............................................................................................................................................................................................................................. 21 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
................ATGTGACGGCGAGTTGACAAA..................................................................................................................................................................................................................... 21 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
.....GTAACCGGCGAATGCG..................................................................................................................................................................................................................................... 16 1 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
......AAACCGGCGAATGTGACGGCGAGTTGA......................................................................................................................................................................................................................... 27 1 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
................................ACAAACGCGGGAAGACCGCAC..................................................................................................................................................................................................... 21 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
..........TGGCGAATGTGACGGCGAGTTGACAA...................................................................................................................................................................................................................... 26 1 20 0.15 3 0 0 0 0 0 3 0 0 0 0 0 0
.....................................CGCGGGAAGACCGCACTT................................................................................................................................................................................................... 18 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
............GCGAATGTGACGGCGAGTTGACA....................................................................................................................................................................................................................... 23 0 20 0.15 3 0 0 0 0 0 3 0 0 0 0 0 0
..................................AAACGCGGGAAGACCGCACTTG.................................................................................................................................................................................................. 22 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
.......AACCGGCGAATGTGACGG................................................................................................................................................................................................................................. 18 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
.............................TTGACAAACGCGGGAAGACCGCACTT................................................................................................................................................................................................... 26 0 20 0.15 3 0 0 2 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TTGGTTTGTACAGTG............................. 15 1 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0
..................GTGACGGCGAGTTGACAAACGCGGGAAG............................................................................................................................................................................................................ 28 0 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0
.................TGTGACGGCGAGTTGACAAACGCGG................................................................................................................................................................................................................ 25 0 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0
..........AGGCGAATGTGACGGCGAGTTGACA....................................................................................................................................................................................................................... 25 1 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0
................ATGTGACGGCGAGTTGACAAACGCGGGA.............................................................................................................................................................................................................. 28 0 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0
..........AGGCGAATGTGACGGCGAGTTGACAA...................................................................................................................................................................................................................... 26 1 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0
..........................GAGTTGACAAACGCGGGA.............................................................................................................................................................................................................. 18 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
..........TGGCGAATGTGACGG................................................................................................................................................................................................................................. 15 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.......ATTAGGCGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 23 3 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0
.......TACCGGCGAATGTGACGGCGAGTTGAC........................................................................................................................................................................................................................ 27 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.....GTAACCGGCGAATGTGACGGCGACT............................................................................................................................................................................................................................ 25 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.........ACGGCGAATGTGACGGCGAGTTGA......................................................................................................................................................................................................................... 24 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................CGAGTTGACAAACGCGGGAAGAC.......................................................................................................................................................................................................... 23 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0
........................GCGAGTTGACAAACGCGGGAAGACCGCAC..................................................................................................................................................................................................... 29 0 20 0.10 2 0 0 0 0 0 0 0 0 2 0 0 0
.....TTAACCGGCGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 25 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
..........GGGCGAATGTGACGGCGAGTTGACAA...................................................................................................................................................................................................................... 26 1 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 2
..............................TGACAAACGCGGGAAGACCGCAC..................................................................................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
...........TGCGAATGTGACGGCGAGTTGACAA...................................................................................................................................................................................................................... 25 1 20 0.10 2 1 0 0 0 0 1 0 0 0 0 0 0
.............................TTGACAAACGCGGGAAGACCGCAC..................................................................................................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................AAAGTTGACAAACGCGGGAAGACCGCACT.................................................................................................................................................................................................... 29 2 20 0.10 2 1 0 0 0 0 0 1 0 0 0 0 0
.........GCGGCGAATGTGACGGCGAGTTGACAA...................................................................................................................................................................................................................... 27 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
..................GTGACGGCGAGTTGACAAACGCGGGAA............................................................................................................................................................................................................. 27 0 20 0.10 2 0 0 1 0 0 0 1 0 0 0 0 0
........................ACGAGTTGACAAACGCGGGAAGACCGCAC..................................................................................................................................................................................................... 29 1 20 0.10 2 1 0 0 0 0 0 1 0 0 0 0 0
..............................TGACAAACACGGGAAGACCGCACTTGT................................................................................................................................................................................................. 27 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
...ATGTAACCGGCGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 27 2 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
........TCCGGCGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 22 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................CGAGTTGACAAACGCGGGAAGACCGCACT.................................................................................................................................................................................................... 29 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
..............................TGACAAACGCGGAAAGACCGCACTTGT................................................................................................................................................................................................. 27 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
..........CGGCGATTGTGACGGCGAGTTGACAA...................................................................................................................................................................................................................... 26 1 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 2
.............CGAATGTGACGGCGAGTTGA......................................................................................................................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
...........GGCGAATGTGACGGCGAGTTGAC........................................................................................................................................................................................................................ 23 0 20 0.10 2 0 0 0 0 0 0 0 0 0 1 1 0
...........................CCGTGACAAACGCGGGAAGACCGCACTTGT................................................................................................................................................................................................. 30 3 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................GGAATTAAAGATAAAG.................................................... 16 1 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0
.............CGAATGTGACGGCGAGTTGACAAAC.................................................................................................................................................................................................................... 25 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0
..................................AAACGCGGGAAGACCGCACTTGTT................................................................................................................................................................................................ 24 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................CGGGAAGACCGCACTTGTT................................................................................................................................................................................................ 19 0 11 0.09 1 0 0 0 0 0 0 0 0 1 0 0 0
................................AAAAACGCGGGAAGACCGCACTTGTT................................................................................................................................................................................................ 26 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................ACGCGGGAAGACCGCACTTGTT................................................................................................................................................................................................ 22 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0
.TTTCGTAACCGGCGAATGTGA.................................................................................................................................................................................................................................... 21 0 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
.TTTCGTAACCGGCGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 29 0 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................ACAGTGTAGGAAAGT.................... 15 1 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................GAGTTGACAAACGCGGGGAGACC......................................................................................................................................................................................................... 23 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
......................CGGCGAGTTGACAAACGCGGGAAG............................................................................................................................................................................................................ 24 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
...........GGCGAATGTGACGGCGAGTTGACAAG..................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.....GTAACCGGCGAATGTGACGGCGAGTCCG......................................................................................................................................................................................................................... 28 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........CGGCGAATGTGACGGCGAGTTTAA........................................................................................................................................................................................................................ 24 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
........................TCGAGTTGACAAACGCGGGAAGACCGCAC..................................................................................................................................................................................................... 29 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
..........CGGCGAATGTGACGGCCAGTTGACAA...................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................AACGCGGGAAGACGGCACTTGA................................................................................................................................................................................................. 22 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........CGGCGAATGTGACGGCGAATTGACAA...................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................ACGCGGGAAGACCGCACTTGG................................................................................................................................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
......................CGGCGAGTTGACAAACGCGGG............................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
......TAACCGGTGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.............CGGATGTGGCGGCGAGTTGAC........................................................................................................................................................................................................................ 21 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
.....GTAACCGGCGTATGTG..................................................................................................................................................................................................................................... 16 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
........ACCGGCGAATGTGACGGCGA.............................................................................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
........ACCGGCGAATGTGACGGCGAGTTGACAA...................................................................................................................................................................................................................... 28 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
.............AAAATGTGACGGCGAGTTGACA....................................................................................................................................................................................................................... 22 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
........TCCGGCGAATGTGACGGCGAGTT........................................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................TGACAAACGCTGGAAGACCGCACT.................................................................................................................................................................................................... 24 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
.......................ACCGAGTTGACAAACGCGG................................................................................................................................................................................................................ 19 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.....GTAACCGGCGAATGTA..................................................................................................................................................................................................................................... 16 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...........GGCGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 19 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................AAACGCGGGAAGACCGCA...................................................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
........................CCGAGTTGACAAACGCGGGAAGACCGCA...................................................................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................CGCGGAAAGACCGCACTTG.................................................................................................................................................................................................. 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.....ATGACCGGCGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 25 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................GGCGAGTTGACAAACGCGGGAAGACC......................................................................................................................................................................................................... 26 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................ACGGCGAGTTGCCAAA..................................................................................................................................................................................................................... 16 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.......AACCGGCGAATGTGACGGCGGGTTGAC........................................................................................................................................................................................................................ 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.............CGAATGTGACGGCGAGTTGACAAA..................................................................................................................................................................................................................... 24 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
.....GTAACCGGCGAATGTGACGGCGAT............................................................................................................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................AAAGTTGACAAACGCGGGAAGACCGCAC..................................................................................................................................................................................................... 28 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..............GAATGTGACGGCGAGTCGACAAA..................................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................GACAAACGCGGGAAGACCGCACCTGT................................................................................................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........CCGCGAATGTGACGGCGAGTTGACA....................................................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...........GGTGAATGTGACGGCGAGTTGACAA...................................................................................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................CGAGTTGACGAACGCGGGAAGACCGCAC..................................................................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...TTGTAACCGGCGAATGTG..................................................................................................................................................................................................................................... 18 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
..........CGGCGAATGTGGCGGCGAGTTGACAA...................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................CGAGTTGACAAACGCGGGAAGACCGCC...................................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.........ACGGCGAATGTGACGGCGAGTTGAC........................................................................................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................GACAAACGCGGGAAGACCGCACT.................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................TGAAAAACGCGGGAGGACCGCACTTGT................................................................................................................................................................................................. 27 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................GTGACAAACGCGGGAAGACCGCACTTGT................................................................................................................................................................................................. 28 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................TGACAAACGCGAGAAGACCGCACTTGT................................................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
................................ACAAACGCGGGAAGACC......................................................................................................................................................................................................... 17 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................CGGGAAGACCGCACCT................................................................................................................................................................................................... 16 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........CGGCGTATGTGACGGCGAGT............................................................................................................................................................................................................................ 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................CGACAAACGCGGGAAGACCGCACTTGT................................................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.....GAAACCGGCGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.............CGAATGTGACTGCGAGTTGACAA...................................................................................................................................................................................................................... 23 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.....GTAACCGGCGAATGTCAA................................................................................................................................................................................................................................... 18 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...................TGACGGCGAGTTGACAAACGCGGGAA............................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
....................AACGGCGAGTTGACAAACGCGGGAAGA........................................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.....GTAACCGGCGAGTGTGACGGCGAGT............................................................................................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
....AGTAACCGGCGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 26 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................CGAGTTGACAAACGCGGGGAGACCGCAC..................................................................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
................ATGTGACGGCGAGTTGACAAACGCGG................................................................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................GGCGAGTTGACAAACGCGGGAAGACCGCA...................................................................................................................................................................................................... 29 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
.......AACCGGCGAATGTGACGGCGAAG............................................................................................................................................................................................................................ 23 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................GAGTTGGCAAACGCGGGAA............................................................................................................................................................................................................. 19 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
...................................CACGCGGGAAGACCGCACT.................................................................................................................................................................................................... 19 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
..........CGGCGAATGTGACGGCGA.............................................................................................................................................................................................................................. 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
........................GCGAGTTGACGAACGCGGGAA............................................................................................................................................................................................................. 21 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................AGGAAGGGTAAACGCAC........... 17 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
............GCGAATGTGACGGCGAGTTGAC........................................................................................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...............TATGTGACGGCGAGTTGACAA...................................................................................................................................................................................................................... 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
.............CGAATGTGACGGCGAGC............................................................................................................................................................................................................................ 17 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........CGGCGAATGTGACGGC................................................................................................................................................................................................................................ 16 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................ACGGCGAGTTGACAAACGCGGGA.............................................................................................................................................................................................................. 23 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
..........CGGCAAATGTGACGGCGAGTTGACA....................................................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........CGGCGAATGTGACGG................................................................................................................................................................................................................................. 15 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........CGGCGAATGTGGCGGCGAGTTGA......................................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...ACGTAACCGGCGAATGTGACGGCGGGT............................................................................................................................................................................................................................ 27 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........CGGCGAATGTGACGGCGAGTTGACAAACG................................................................................................................................................................................................................... 29 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
..............................GGACAAACGCGGGAAGACCGCACTTGT................................................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
........AAAGGCGAATGTGACGGCGAGTTGACA....................................................................................................................................................................................................................... 27 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................AGAGTTGACAAACGCGGGAAGACCGCAC..................................................................................................................................................................................................... 28 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
..........AGGCGAATGTGACGGCGAGTTGA......................................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...............TTTTTGACGGCGAGTTGACAAAC.................................................................................................................................................................................................................... 23 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
....CGTAACCGGCGAATGTGA.................................................................................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
................ATGTGACGGCGAGTCGACAAACGCGGGA.............................................................................................................................................................................................................. 28 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...........GGCGAATGTGACGGCGAGTT........................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
............................GTTGACAAACGCGGGA.............................................................................................................................................................................................................. 16 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................CGCGGGAAGACCGCA...................................................................................................................................................................................................... 15 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..................GTGACGGCGAGTTGACAAACGC.................................................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
........TTTGGCGAATGTGACGGCGA.............................................................................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
..............................TGACAAACGCGGGAAGACCGCACTCGT................................................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........CGGCGAATGTGACGTCGAGTTGACAA...................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
........ACCGGCGAATGTGACGGCGAGTTTA......................................................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...........AAAGAATGTGACGGCGAGTTGACAA...................................................................................................................................................................................................................... 25 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
................ATGTGACGGCGAGTTGACAAACGCTTGA.............................................................................................................................................................................................................. 28 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................TCGTGACAAACGCGGGAAGACCGCACTTGT................................................................................................................................................................................................. 30 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................ACGGCGAGTTGACAA...................................................................................................................................................................................................................... 15 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
............GCGGATGTGACGGCGAGTTGACAAA..................................................................................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
..........................TACGTGACAAACGCGGGAAGACCGCACTTGT................................................................................................................................................................................................. 31 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........CGGCGAATGTGACGACCAGTTGACAA...................................................................................................................................................................................................................... 26 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.........CCGGCGAATGTGACGGCGAGTTGAC........................................................................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TCGGCGAATGTGACGGCGAGTT........................................................................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................CAAACGCGGGAAGACCGCAC..................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
............GCGAATGTGGCGGCGAGTTGA......................................................................................................................................................................................................................... 21 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
...........GGCGAATGAGACGGCGAGTTGACAA...................................................................................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
........ACGGGCGAAGGTGACGGCGAGTTGACA....................................................................................................................................................................................................................... 27 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
......................CGGCGAGTTGACAAACGCGGGAAGACCGC....................................................................................................................................................................................................... 29 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................GAGTTGACAAACGCGGGAAGA........................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................TGACAAACGCGGGGAGACCGCACTTGT................................................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
....ATAAACCGGCGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 26 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..................GTGACGGCGAGTTGACAAAC.................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................GGAAGACCGCACTTGT................................................................................................................................................................................................. 16 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................CGAGTTGACAAACGCGGGAAGACTGCA...................................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................GGAGTTGACAAACGCGGGAAGACCGCAC..................................................................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........CGGCGAATGTGACGGCTAGTTGACAA...................................................................................................................................................................................................................... 26 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
..........TGGCGGATGTGACGGCGAGT............................................................................................................................................................................................................................ 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
.....GTAACCGGCTAATGTGACGGCGAGT............................................................................................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................AAACGCGGGAAGACCGCACTT................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................AAAACGCGGGAAGACCGCAC..................................................................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................AAGTTGACAAACGCGGGAAGACCGCAC..................................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................GGCGAGTTGACAAACG................................................................................................................................................................................................................... 16 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................TGACGAACGCGGGAAGACCGCACTTGT................................................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
................ATGTGACGGGGAGTTGACAAA..................................................................................................................................................................................................................... 21 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
......CAAACGGCGAATGTGACGGCGAGT............................................................................................................................................................................................................................ 24 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.............CGAATGTGACGGCGAGTTGACA....................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
......TAACCGGCGAATGTGACG.................................................................................................................................................................................................................................. 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.................TGTGACGGCGAGTTTACAAACGCGGGA.............................................................................................................................................................................................................. 27 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
.....................ACGGCGAGTTGACAAACGCGG................................................................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.............TTTATGTGACGGCGAGTTGA......................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
................ATGTGACGGCGAGTTGACAGAC.................................................................................................................................................................................................................... 22 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
.......AACCGGCGAATGTGACGGCGAGTCGAC........................................................................................................................................................................................................................ 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CAAAGTCAAGTTGTT.......................................... 15 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.......AAACGGCGAATGTGACGGCGAGTTGAC........................................................................................................................................................................................................................ 27 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
...........GGCGAATGTGACGGCGAGTTGACAGA..................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...........GGCGAATGTAACGGCGAGTTGACA....................................................................................................................................................................................................................... 24 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
...........GGCGAATGTGACGGC................................................................................................................................................................................................................................ 15 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
..................GTGACGGCGAGTTGACAAACGCGGGT.............................................................................................................................................................................................................. 26 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
.......................................AGGGAAGACCGCACTTG.................................................................................................................................................................................................. 17 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.............TGGATGTGACGGCGAGTTGACAAA..................................................................................................................................................................................................................... 24 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.................TGTGACGGCGAGTTGACAAACGCGGGA.............................................................................................................................................................................................................. 27 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
...................TGACGGCGTGTTGACAAACGCGGGA.............................................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
............ACGGATGTGGCGGCGAGTTGA......................................................................................................................................................................................................................... 21 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
...................TGACGGCGAGTTGACAAAA.................................................................................................................................................................................................................... 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........CGCCGAATGTGACGGCGAGTTGACAAA..................................................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................GACAAACGCGGGAAGACCGCA...................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
................................ACAAACGCGGGAAGACCG........................................................................................................................................................................................................ 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
......TAACCGGCGAACGTGACGGCGAGTT........................................................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.........ACGGCGAATGTGACGGCGAGTTGACAA...................................................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........CCGCGAATGTGACGGCGAGTTGA......................................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
............GCGAATGTGACGGCGGGT............................................................................................................................................................................................................................ 18 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........CGGCGAATGTGACGGCGAGTTGACAAAC.................................................................................................................................................................................................................... 28 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
...........GGCGAATGTGACGGCGAGTTGACAA...................................................................................................................................................................................................................... 25 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
.....................ACGGCGAGTTGACAAACGCGGGAAGAC.......................................................................................................................................................................................................... 27 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:2310428-2310677 + dsi_2758 AAAAGCATTGGCCGCTTACACTGCCGCTCAACTGTTTGCGCCCTTCTGGCGTGAACAACAACTAAAAATATCCCTAACGCCT------------------------AATA-AAAA----AATGTTCATCGAAGTAGGAAAC--AAAACGGCGACTACTTGTCGATTGTATTAACACTCCTG-----------AAAAATTA-----------------------CACAT-TTATTTTT-------------------------------------------------------AT--------TAATAAGAACCT-TAA--------------TTTCTTTTTCAGTTCAACAACCAAACCTGTCACATCCTTTCCATTTGCATGGTTACGGATTC
droSec2 scaffold_105:62348-62539 + ACAACT--A-------------------------------------------------------AAAATATCCCTAACGAAT------------------------AATA-AAAA----AATGTTCATTGAAGTGGAAAAC--AAAACGGCGACTACT-GTCGATTATATTAACACTCCTG-----------AAAAATTA-----------------------CACAT-TTATTTTT-------------------------------------------------------AT--------TAATAAGAACCT-TAA--------------TTTCTTTTTCAGTTCAACAACCAAACTTGTCACATCCTTTCCATTTGCATGGTTACGGATTC
dm3 chr2R:1333877-1334089 + TCGAAC--T-----------------------------------------------------------------------------------------------------------------------------AGGAAAC--AAAACGGCGAC------TCGATTATATTAACACTCCTA-----------AAAAATTA-----------------------CACAT-ATT--TTGGGATCAGATTTTAAACATCCAAGCAGATTAAAACTTTTTTGCAGTGAACTAGTAAAT--------TATTAAGATCCT-TAATTTCTTTCTCATCTTTTATTTTGCAGTTCAACAACCCAATTTGTCACATCCTTTCCATTTGCACGGTTACGGGTTC
droEre2 scaffold_4929:21182539-21182601 - A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTTTCAGTTCAACAACCCAATTTGTCACATCCTTTCCATTTGCACGGATACGGTTTC
droYak3 v2_chrUn_6631:91624-91840 - ACAAGCATTGGCCGCTTACACTGCCGCTCAACTGCTTGCGCCCTTCTGGCGTGATCA-------GAAATCATCCTACCGAACATCATCCTACCAGCAACAATGACCATTATAAAT----AACGTTCATGAAAGTAAAGTTCTTAATACAGCAAATACAT-AAGATTGAATTATAGCTACAGCTGATTCTAATAAAAATTA-----------------------ACCAA-TTTGGACT-------------------------------------------------------AC--------TAATAAAAAT------------------------------------------------------------------------------GTTA
droEug1 scf7180000407544:32741-32934 - AACAGAATGCATCGTTAAGCCTAATATTAAGCTGTTTA--ATTTTATAAAACTATTA-------ATAATTATCCCAGGTACTATATTTTTCCTAAAATGTTTGCATTTCTTTAATAAAAATTGTTTATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAT-TAA----------ATTTTTCTCTACGTAGTTCAACAACCAAACTTGTCTCACCCATTCCATTTGCACGGATACGGGTTT
droBia1 scf7180000302426:34944-35001 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCCAGTTCAACAGCCCAACTTGTCACATCCTTTCCATTTGCATGGATACGGATTT
droTak1 scf7180000415069:14023-14131 - TAATAC--CCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTA-----------CAAGAGTATACAAATATGACTGACTTAATGA------------------------------------------------------------------------------------------T-T--------------ATTCTTTTATGCAGTCCAGCAGCCCAACTTGTCGCATCCTTTTCATTTGCACGGGTACGGGTTT
droEle1 scf7180000490085:21237-21304 - TAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCTTTATGCAGTTCAACAGCCTAACTTGTCGCACCCTTTCCATTTGCACGGATACGGGTTT
droRho1 scf7180000774318:65741-65820 - TAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTAATAA--------------------------------------------------------------------------------------------T--------------TATTCTTTATGCAGTTCAACAGCCCAATTTGTCGCATCCCTTCCACTTGCATGGATACGGGTTT
droFic1 scf7180000454071:3222-3283 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGTTGCAGTTCAACAGCCCAACTTGTCCCATCCTTTTCATTTGCACGGATATGGCTTT
droKik1 scf7180000301643:24162-24237 + AAGCGC--TGGCCGCTTACACTGCCGCTCAGAAATTCGCGCCCTTCTGGCGTGAATATGATCGATGACCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCGTAAC
droAna3 scaffold_12586:177647-177761 - CTGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTA-------------------A---TATGTCTCATTTTT-------------------------------------------------------GTCAGTATTATAATAATAATCTGTAA-------------TTATTTTATTTAGTTCAACAGCCCAACTTGTCTCATCCATTCCACTTACATGGATATGGATTT
droBip1 scf7180000396570:63150-63230 - ATCATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATACTAA--------------------------------------------------------------------------------------------A--------------ATTATTTTGTTTAGTTCAACAACCCAATTTGTCTCATCCGTTCCACTTGCACGGATATGGATTT
dp5 Unknown_group_191:11474-11533 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGTAGTGCAACAACCAAACTTGTCGCATCCATTTCACTTGCACGGATACGGGTTC
droPer2 scaffold_2:101766-101825 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGTAGTGCAACAACCAAACTTGTCGCATCCATTTCACTTGCACGGATACGGGTTC
droWil2 scf2_1100000004513:5235303-5235376 - ACTAAT--G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------A-A--------------ATATTATTTCGCAGTACAACAACCAAATCTCTCGCATCCCTTCCATTTGCACGGCTATGGATTC
droVir3 scaffold_12875:12302074-12302129 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGTGCAACAGCCAAACCTGTCACATCCCTTCCATTTGCACGGCTACGGATTC
droMoj3 scaffold_6496:14567722-14567777 - T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGTACAACAACCCAATCTGTCCCATCCATTCCATTTGCATGGTTATGGCTTC
droGri2 scaffold_9302:5105-5161 + T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACAGTTCAACAACCCAACTTGTCGCATCCATTCCATTTGCACGGCTACGGCTTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAAAGCATTGGCCGCTTACACTGCCGCTCAACTGTTTGCGCCCTTCTGGCGTGAACAACAACTAAAAATATCCCTAACGCCT------------------------AATA-AAAA----AATGTTCATCGAAGTAGGAAAC--AAAACGGCGACTACTTGTCGATTGTATTAACACTCCTG-----------AAAAATTA-----------------------CACAT-TTATTTTT-------------------------------------------------------AT--------TAATAAGAACCT-TAA--------------TTTCTTTTTCAGTTCAACAACCAAACCTGTCACATCCTTTCCATTTGCATGGTTACGGATTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................TCAACTGTTTGCGCCCTTCTGGCGTG.....................................................................................................................................................................................................................................................................................................................................................2620309.80619600413003501017519187200000
........................CGCTCAACTGTTTGCGCCCTTCTGGCGTG.....................................................................................................................................................................................................................................................................................................................................................2920186.0037200000001706162738601000000
........................CGCTCAACTGTTTGCGCCCTTCTGGCGT......................................................................................................................................................................................................................................................................................................................................................282043.05861000600179304134154721200000
...........................TCAACTGTTTGCGCCCTTCTGG.........................................................................................................................................................................................................................................................................................................................................................222020.304060014007814091816050000
.....................TGCCGCTCAACTGTTTGCGCCCTTCTGGCGTG.....................................................................................................................................................................................................................................................................................................................................................322016.3032600000028343000000000
.........................GCTCAACTGTTTGCGCCCTTCTGGCGTG.....................................................................................................................................................................................................................................................................................................................................................282015.6531300020011114321350100000
.....................TGCCGCTCAACTGTTTGCGCCCTTC............................................................................................................................................................................................................................................................................................................................................................252014.60292000181001015263026040000
.....................TGCCGCTCAACTGTTTGCGCCCTT.............................................................................................................................................................................................................................................................................................................................................................242014.1028200002430469019100000
...........................TCAACTGTTTGCGCCCTTCTGGCGTGA....................................................................................................................................................................................................................................................................................................................................................272013.402680001400778155346010000
.....................TGCCGCTCAACTGTTTGCGCC................................................................................................................................................................................................................................................................................................................................................................212010.5021000031660002039000000
.....................TGCCGCTCAACTGTTTGCGCCCT..............................................................................................................................................................................................................................................................................................................................................................232010.002000001408135222448120000
...........................TCAACTGTTTGCGCCCTTCTGGCGT......................................................................................................................................................................................................................................................................................................................................................25209.701940004004341342942100000
........................CGCTCAACTGTTTGCGCCCTTCTGGCGA......................................................................................................................................................................................................................................................................................................................................................28209.40188000100517823340100000
........................CGCTCAACTGTTTGCGCCCTTCTGGCG.......................................................................................................................................................................................................................................................................................................................................................27209.35187000400079530132000000
.....................TGCCGCTCAACTGTTTGCG..................................................................................................................................................................................................................................................................................................................................................................19208.651730000170000003000000
..........................CTCAACTGTTTGCGCCCTTCTGGCGTG.....................................................................................................................................................................................................................................................................................................................................................27208.20164000000468118190000000
.....................TGCCGCTCAACTGTTTGCGCCCTTCT...........................................................................................................................................................................................................................................................................................................................................................26205.85117000156307710132000000
...............TTACACTGCCGCTCAACTGTTTGC...................................................................................................................................................................................................................................................................................................................................................................24205.101020031582000100100000
............................................................................................................TA-AAAA----AATGTTCATCGAAGTAGGAA...............................................................................................................................................................................................................................................................2615.00500000013001000000
.......TTGGCCGCTTACACTGCCGCTCA............................................................................................................................................................................................................................................................................................................................................................................23204.3587000087000000000000
...............TTACACTGCCGCTCAACT.........................................................................................................................................................................................................................................................................................................................................................................18204.3587000087000000000000
........................CGCTCAACTGTTTGCGCCCTTCTGGCGTGA....................................................................................................................................................................................................................................................................................................................................................30204.058100000034244170020000
AAAAGCATTGGCCGCTTA........................................................................................................................................................................................................................................................................................................................................................................................18124.0048000000000048000000
...........................TCAACTGTTTGCGCCCTTCTGGCG.......................................................................................................................................................................................................................................................................................................................................................24203.507000000022291801000000
........................CGCTCAACTGTTTGCGCCCTTCTGGC........................................................................................................................................................................................................................................................................................................................................................26203.40680003200920002050000
.....................TGCCGCTCAACTGTTTGCGCCCTTCTG..........................................................................................................................................................................................................................................................................................................................................................27202.004000010000415110000000
............................................................................................................TA-AAAA----AATGTTCATCGAAGTAGGA................................................................................................................................................................................................................................................................2512.00200000011000000000
..............................................TGGCGTGAACAACAACT...........................................................................................................................................................................................................................................................................................................................................1712.00200000000002000000
.........................................................................................................................TGTTCATCGAAGTAGGAAAC--AAAACGGC...................................................................................................................................................................................................................................................2812.00200000000011000000
.AAAGCATTGGCCGCTTA........................................................................................................................................................................................................................................................................................................................................................................................17121.7521000000000021000000
..AAGCATTGGCCGCTTA........................................................................................................................................................................................................................................................................................................................................................................................16201.4529000000000029000000
.................................GTTTGCGCCCTTCTGGCGT......................................................................................................................................................................................................................................................................................................................................................19201.4028000000000028000000
........................CGCTCAACTGTTTGCGCCCTTCTGG.........................................................................................................................................................................................................................................................................................................................................................25201.3527000240001110000000
.............................AACTGTTTGCGCCCTTCTGGCGTG.....................................................................................................................................................................................................................................................................................................................................................24201.202400000088530000000
...............TTACACTGCCGCTCAACTGTTTGCGCC................................................................................................................................................................................................................................................................................................................................................................27201.1022000160006000000000
...........................TCAACTGTTTGCGCCCTTCTG..........................................................................................................................................................................................................................................................................................................................................................21201.1022000200401006000000
...........................TCAACTGTTTGCGCCCTTCTGGCGTGAA...................................................................................................................................................................................................................................................................................................................................................28201.0521001190000000010000
........................CGCTCAACTGTTTGCGCCCTTCTG..........................................................................................................................................................................................................................................................................................................................................................24201.052100030004473000000
..........................................................................................................................................................TACTTGTCGATTGTATTAACACTCC.......................................................................................................................................................................................................................2511.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................TTTTCAGTTCAACAACCAAACCTGTCACA............................2911.00100000000010000000
...........................TCAACTGTTTGCGCCCTTCTGGC........................................................................................................................................................................................................................................................................................................................................................23201.002000000047045000000
............................................................................................................................TCATCGAAGTAGGAAAC--AAAACGGC...................................................................................................................................................................................................................................................2511.00100000000001000000
.................................................................................T------------------------AATA-AAAA----AATGTTCATCGAAGTAGGA................................................................................................................................................................................................................................................................2811.00100000001000000000
......................................................ACAACAACTAAAAATATCCCTAACGCC.........................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
...........................................................................................................................TTCATCGAAGTAGGAAAC--AAAACGGC...................................................................................................................................................................................................................................................2611.00100010000000000000
...................................................................................................................................AGTAGGAAAC--AAAACGGCGACTACT............................................................................................................................................................................................................................................2511.00100000000001000000
..........................................................................................................................................................TACTTGTCGATTGTATTAACACTC........................................................................................................................................................................................................................2411.00100000001000000000
...................................................................................................................................AGTAGGAAAC--AAAACGGCGACTA..............................................................................................................................................................................................................................................2311.00100000000001000000
...........................TCAACTGTTTGCGCCCTTCTGGCA.......................................................................................................................................................................................................................................................................................................................................................24200.951900010024360030000
.....................TGCCGCTCAACTGTTTGCGC.................................................................................................................................................................................................................................................................................................................................................................20200.9519000000000216100000
AAAAGCATTGGCCGCTTAC.......................................................................................................................................................................................................................................................................................................................................................................................19120.9211000000000011000000
.....................TGCCGCTCAACTGTTTGCGCCCTTCTGGCGT......................................................................................................................................................................................................................................................................................................................................................31200.9018000000180000000000
.............................AACTGTTTGCGCCCTTC............................................................................................................................................................................................................................................................................................................................................................17200.8517000000000017000000
........................CGCTCAACTGTTTGCGCCCTTCTGGCAA......................................................................................................................................................................................................................................................................................................................................................28200.851700000016010090000
..................CACTGCCGCTCAACTGTTTGCGCCCT..............................................................................................................................................................................................................................................................................................................................................................26200.751500000010535100000
............CGCTTACACTGCCGCTCAACTGTT......................................................................................................................................................................................................................................................................................................................................................................24200.751500000090600000000
.....................TGCCGCTCAACTGTTTGCGCCC...............................................................................................................................................................................................................................................................................................................................................................22200.651300220001015020000
...............TTACACTGCCGCTCAACTGTTTGCG..................................................................................................................................................................................................................................................................................................................................................................25200.6513000130000000000000
........................CGCTCAACTGTTTGCGCCCTTCTGGCGTT.....................................................................................................................................................................................................................................................................................................................................................29200.601200000045030000000
.....................TGCCGCTCAACTGTTTGCGCCCTTCTGGCGA......................................................................................................................................................................................................................................................................................................................................................31200.6012000000102000000000
........................CGCTCAACTGTTTGCGCCCTTCT...........................................................................................................................................................................................................................................................................................................................................................23200.601200000021270000000
..................CACTGCCGCTCAACTGTTTGCGCCC...............................................................................................................................................................................................................................................................................................................................................................25200.601200540000120000000
............................CAACTGTTTGCGCCCTTCTGG.........................................................................................................................................................................................................................................................................................................................................................21200.551100010030131020000
...........................TCAACTGTTTGCGCCCTTCTGGCTA......................................................................................................................................................................................................................................................................................................................................................25200.551100000023150000000
...................ACTGCCGCTCAACTGTTTGCGCCCT..............................................................................................................................................................................................................................................................................................................................................................25200.551100000003350000000
...........................TCAACTGTTTGCGCCCTTCTGGCGA......................................................................................................................................................................................................................................................................................................................................................25200.551100010030340000000
........................CGCTCAACTGTTTGCGCCCTTCTGGCA.......................................................................................................................................................................................................................................................................................................................................................27200.551100000003260000000
......................GCCGCTCAACTGTTTGCGCCCTTC............................................................................................................................................................................................................................................................................................................................................................24200.5010000100000000000000
..................CACTGCCGCTCAACTGTTTGCGCC................................................................................................................................................................................................................................................................................................................................................................24200.501000300010402000000
.....................TGCCGCTCAACTGTTT.....................................................................................................................................................................................................................................................................................................................................................................16200.45900000000009000000
.....................TGCCGCTCAACTGTTTGCGCCCTTCTGGC........................................................................................................................................................................................................................................................................................................................................................29200.45900020015010000000
..............................ACTGTTTGCGCCCTTC............................................................................................................................................................................................................................................................................................................................................................16200.45900000000009000000
AAAAGCATTGGCCGCT..........................................................................................................................................................................................................................................................................................................................................................................................16120.42500000000005000000
...............TTACACTGCCGCTCAACTGTTTG....................................................................................................................................................................................................................................................................................................................................................................23200.40800050012000000000
..................CACTGCCGCTCAACTGTTTGCGC.................................................................................................................................................................................................................................................................................................................................................................23200.40800000001331000000
...........................TCAACTGTTTGCGCCCTTC............................................................................................................................................................................................................................................................................................................................................................19200.40800000020006000000
.........................GCTCAACTGTTTGCGCCCTTCTGGCG.......................................................................................................................................................................................................................................................................................................................................................26200.40800040030001000000
.........................GCTCAACTGTTTGCGCCCTTCTGGCGA......................................................................................................................................................................................................................................................................................................................................................27200.40800000005210000000
..AAGCATTGGCCGCTTAC.......................................................................................................................................................................................................................................................................................................................................................................................17200.40800000000008000000
.........................GCTCAACTGTTTGCGCCCTTCTGGC........................................................................................................................................................................................................................................................................................................................................................25200.40800040010002010000
................TACACTGCCGCTCAACTGTTTGCGCC................................................................................................................................................................................................................................................................................................................................................................26200.40800000012311000000
.............................AACTGTTTGCGCCCTTCTGGCGT......................................................................................................................................................................................................................................................................................................................................................23200.35700000000007000000
................TACACTGCCGCTCAACTGTTTGCGC.................................................................................................................................................................................................................................................................................................................................................................25200.35700000022020010000
.AAAGCATTGGCCGCTTAC.......................................................................................................................................................................................................................................................................................................................................................................................18120.33400000000004000000
.........................GCTCAACTGTTTGCGCCCTTCTGGCGT......................................................................................................................................................................................................................................................................................................................................................27200.30600000023010000000
.....................TGCCGCTCAACTGTTTGC...................................................................................................................................................................................................................................................................................................................................................................18200.30600100000005000000
........................CGCTCAACTGTTTGCGCCCTTCTGGCTA......................................................................................................................................................................................................................................................................................................................................................28200.30600000012210000000
........................CGCTCAACTGTTTGCGCCCTTCTGGCGTC.....................................................................................................................................................................................................................................................................................................................................................29200.30600000013020000000
............................CAACTGTTTGCGCCCTTCTGGCGTGA....................................................................................................................................................................................................................................................................................................................................................26200.30600000020310000000
........................CGCTCAACTGTTTGCGCCCTTCTGGCGAT.....................................................................................................................................................................................................................................................................................................................................................29200.30600000005010000000
......................GCCGCTCAACTGTTTGCGCCCTTCTGGCG.......................................................................................................................................................................................................................................................................................................................................................29200.30600000060000000000
...........................TCAACTGTTTGCGCCCTTCTGGCT.......................................................................................................................................................................................................................................................................................................................................................24200.30600010003020000000
...........................TCAACTGTTTGCGCCCTTCTGGAAA......................................................................................................................................................................................................................................................................................................................................................25200.30600000014000010000
........................CGCTCAACTGTTTGCGCC................................................................................................................................................................................................................................................................................................................................................................18200.30600000000006000000
..........................CTCAACTGTTTGCGCCCTTC............................................................................................................................................................................................................................................................................................................................................................20200.25500000000005000000
...........................TCAACTGTTTGCGCCCTTCTGGA........................................................................................................................................................................................................................................................................................................................................................23200.25500000022000010000
...............TTACACTGCCGCTCAACTGTTTGCGCCCT..............................................................................................................................................................................................................................................................................................................................................................29200.25500050000000000000
AAAAGCATTGGCCGCTTACAC.....................................................................................................................................................................................................................................................................................................................................................................................21120.25300000000003000000
...........................TCAACTGTTTGCGCCCTTCTGGT........................................................................................................................................................................................................................................................................................................................................................23200.25500000003101000000
.................................GTTTGCGCCCTTCTGGCGTG.....................................................................................................................................................................................................................................................................................................................................................20200.20400000000004000000
................TACACTGCCGCTCAACTGTTTGCGCCC...............................................................................................................................................................................................................................................................................................................................................................27200.20400100010001010000
.....................TGCCGCTCAACTGTT......................................................................................................................................................................................................................................................................................................................................................................15200.20400000000004000000
........................CGCTCAACTGTTTGCGCCCTTCTGGCTAT.....................................................................................................................................................................................................................................................................................................................................................29200.20400000002020000000
.................................GTTTGCGCCCTTCTGGCGTGA....................................................................................................................................................................................................................................................................................................................................................21200.20400000000112000000
...AGCATTGGCCGCTTA........................................................................................................................................................................................................................................................................................................................................................................................15200.20400000000004000000
..AAGCATTGGCCGCTTACA......................................................................................................................................................................................................................................................................................................................................................................................18200.20400000000004000000
...........CCGCTTACACTGCCGCTCAACTGTT......................................................................................................................................................................................................................................................................................................................................................................25200.20400000020110000000
...........................TCAACTGTTTGCGCCCTTCTGGATA......................................................................................................................................................................................................................................................................................................................................................25200.20400000010030000000
................................TGTTTGCGCCCTTCTGG.........................................................................................................................................................................................................................................................................................................................................................17200.20400000030001000000
.....................TGCCGCTCAACTGTTTGCGCCCTTA............................................................................................................................................................................................................................................................................................................................................................25200.20400010000030000000
.......................CCGCTCAACTGTTTGCGCCCTTCTGGCGTG.....................................................................................................................................................................................................................................................................................................................................................30200.20400000040000000000
....GCATTGGCCGCTTAC.......................................................................................................................................................................................................................................................................................................................................................................................15200.20400000000004000000
..............CTTACACTGCCGCTCAACTGTT......................................................................................................................................................................................................................................................................................................................................................................22200.20400000000130000000
...................ACTGCCGCTCAACTGTTTGCGCCC...............................................................................................................................................................................................................................................................................................................................................................24200.20400200000020000000
AAAAGCATTGGCCGC...........................................................................................................................................................................................................................................................................................................................................................................................15120.17200000000002000000
AAAAGCATTGGCCGCTTACACTGCCGC...............................................................................................................................................................................................................................................................................................................................................................................27120.17200000000101000000
.....................TGCCGCTCAACTGTTTGCGCCCTTCTGGCGTGA....................................................................................................................................................................................................................................................................................................................................................33200.15300000030000000000
.....................TGCCGCTCAACTGTTTGCGCCCTG.............................................................................................................................................................................................................................................................................................................................................................24200.15300030000000000000
.............................AACTGTTTGCGCCCTTCTGGC........................................................................................................................................................................................................................................................................................................................................................21200.15300000020001000000
...........................TCAACTGTTTGCGCCCTTCTGA.........................................................................................................................................................................................................................................................................................................................................................22200.15300000002000010000
.......TTGGCCGCTTACACTGCCGCTCAACTGTT......................................................................................................................................................................................................................................................................................................................................................................29200.15300000011010000000
...........................TCAACTGTTTGCGCCCTTCTGGAA.......................................................................................................................................................................................................................................................................................................................................................24200.15300000000001020000
........................CGCTCAACTGTTTGCGCCCTTCTGGCTAC.....................................................................................................................................................................................................................................................................................................................................................29200.15300000012000000000
..........................CTCAACTGTTTGCGCCCTTCTGGCGT......................................................................................................................................................................................................................................................................................................................................................26200.15300000002001000000
...........................TCAACTGTTTGCGCCCTTCTGGCGAT.....................................................................................................................................................................................................................................................................................................................................................26200.15300000012000000000
............................CAACTGTTTGCGCCCTTCTGGC........................................................................................................................................................................................................................................................................................................................................................22200.15300010011000000000
...................ACTGCCGCTCAACTGTTTGCGCCCTTC............................................................................................................................................................................................................................................................................................................................................................27200.15300020000010000000
....................CTGCCGCTCAACTGTTTGCGCCCT..............................................................................................................................................................................................................................................................................................................................................................24200.15300010001001000000
..........................CTCAACTGTTTGCGCCCTTCTGGC........................................................................................................................................................................................................................................................................................................................................................24200.15300010001100000000
........................CGCTCAACTGTTTGCGCCCTTCTGGCGTGT....................................................................................................................................................................................................................................................................................................................................................30200.15300000000120000000
......................GCCGCTCAACTGTTTGCGCCCTTCTGGCGTG.....................................................................................................................................................................................................................................................................................................................................................31200.15300000020010000000
...........................TCAACTGTTTGCGCCCTTCTGGCAC......................................................................................................................................................................................................................................................................................................................................................25200.15300000011010000000
.....................TGCCGCTCAACTGTTTGCGCCCTTCTGGAA.......................................................................................................................................................................................................................................................................................................................................................30200.15300000030000000000
........................CGCTCAACTGTTTGCGCCCTTCTGGCGTCT....................................................................................................................................................................................................................................................................................................................................................30200.15300000011010000000
...........................TCAACTGTTTGCGCCCTTCTGGTT.......................................................................................................................................................................................................................................................................................................................................................24200.15300010001001000000
................................TGTTTGCGCCCTTCTGGCGTGA....................................................................................................................................................................................................................................................................................................................................................22200.15300000010200000000
..................CACTGCCGCTCAACTGTTTGC...................................................................................................................................................................................................................................................................................................................................................................21200.15300000001002000000
.........................GCTCAACTGTTTGCGCCCTTCTGGAA.......................................................................................................................................................................................................................................................................................................................................................26200.10200000000000011000
............................CAACTGTTTGCGCCCTTCTGGCGTG.....................................................................................................................................................................................................................................................................................................................................................25200.10200020000000000000
..........................CTCAACTGTTTGCGCCCTTCTGGCG.......................................................................................................................................................................................................................................................................................................................................................25200.10200010010000000000
..........................CTCAACTGTTTGCGCCCTTCTGG.........................................................................................................................................................................................................................................................................................................................................................23200.10200000000011000000
...........................TCAACTGTTTGCGCCCTTCTGGCGTT.....................................................................................................................................................................................................................................................................................................................................................26200.10200000020000000000
...............................CTGTTTGCGCCCTTCTGGCGTG.....................................................................................................................................................................................................................................................................................................................................................22200.10200000000020000000
.....................TGCCGCTCAACTGTTTGCGCCCTTCA...........................................................................................................................................................................................................................................................................................................................................................26200.10200000010010000000
......................GCCGCTCAACTGTTTGCGCCCTT.............................................................................................................................................................................................................................................................................................................................................................23200.10200020000000000000
............CGCTTACACTGCCGCTCAACTG........................................................................................................................................................................................................................................................................................................................................................................22200.10200000000000020000
......................GCCGCTCAACTGTTTGCGCCCT..............................................................................................................................................................................................................................................................................................................................................................22200.10200020000000000000
..................CACTGCCGCTCAACTGTT......................................................................................................................................................................................................................................................................................................................................................................18200.10200000020000000000
...........................TCAACTGTTTGCGCCCTTCTGGACA......................................................................................................................................................................................................................................................................................................................................................25200.10200000002000000000
................TACACTGCCGCTCAACTGTTTGC...................................................................................................................................................................................................................................................................................................................................................................23200.10200000000020000000
...........................TCAACTGTTTGCGCCCTTCTGGCTC......................................................................................................................................................................................................................................................................................................................................................25200.10200000011000000000
....................CTGCCGCTCAACTGTTTGCGC.................................................................................................................................................................................................................................................................................................................................................................21200.10200000000101000000
...AGCATTGGCCGCTTACACTGCCGC...............................................................................................................................................................................................................................................................................................................................................................................24200.10200000000002000000
...................................TTGCGCCCTTCTGGCGT......................................................................................................................................................................................................................................................................................................................................................17200.10200000000002000000
...........................TCAACTGTTTGCGCCC...............................................................................................................................................................................................................................................................................................................................................................16200.10200000000002000000
.............................AACTGTTTGCGCCCTTCTGG.........................................................................................................................................................................................................................................................................................................................................................20200.10200000010001000000
..........................CTCAACTGTTTGCGCCCTTCTG..........................................................................................................................................................................................................................................................................................................................................................22200.10200020000000000000
................TACACTGCCGCTCAACTGTTTGCGCCCA..............................................................................................................................................................................................................................................................................................................................................................28200.10200000000200000000
.....................TGCCGCTCAACTGTTTGCGCCCTTCTGG.........................................................................................................................................................................................................................................................................................................................................................28200.10200000020000000000
............CGCTTACACTGCCGCTCAACT.........................................................................................................................................................................................................................................................................................................................................................................21200.10200000002000000000
...........................TCAACTGTTTGCGCCCTTCTGGCTCT.....................................................................................................................................................................................................................................................................................................................................................26200.10200010010000000000
.................................GTTTGCGCCCTTCTGGCG.......................................................................................................................................................................................................................................................................................................................................................18200.10200000000002000000
...............TTACACTGCCGCTCAACTGTT......................................................................................................................................................................................................................................................................................................................................................................21200.10200000001010000000
........................CGCTCAACTGTTTGCGCCCTTCTGGCGTGC....................................................................................................................................................................................................................................................................................................................................................30200.10200000002000000000
..............CTTACACTGCCGCTCAACTGT.......................................................................................................................................................................................................................................................................................................................................................................21200.10200010000001000000
...........................TCAACTGTTTGCGCCCTTCTGGCGTGAAA..................................................................................................................................................................................................................................................................................................................................................29200.10200020000000000000
...............................CTGTTTGCGCCCTTCTGGCGT......................................................................................................................................................................................................................................................................................................................................................21200.10200000000002000000
........TGGCCGCTTACACTGCCGCTCAACTGTT......................................................................................................................................................................................................................................................................................................................................................................28200.10200000010010000000
...........................TCAACTGTTTGCGCCCTTCTGGTTA......................................................................................................................................................................................................................................................................................................................................................25200.10200000010010000000
....GCATTGGCCGCTTACA......................................................................................................................................................................................................................................................................................................................................................................................16200.10200000000002000000
.......TTGGCCGCTTACACTGCCGCTCAACTGT.......................................................................................................................................................................................................................................................................................................................................................................28200.10200000000110000000
..........................CTCAACTGTTTGCGCCCTTCT...........................................................................................................................................................................................................................................................................................................................................................21200.10200000020000000000
..............................ACTGTTTGCGCCCTTCTGGCGT......................................................................................................................................................................................................................................................................................................................................................22200.10200000000002000000
....GCATTGGCCGCTTACAC.....................................................................................................................................................................................................................................................................................................................................................................................17200.10200000000002000000
................................TGTTTGCGCCCTTCTG..........................................................................................................................................................................................................................................................................................................................................................16200.10200000000002000000
...AGCATTGGCCGCTTACA......................................................................................................................................................................................................................................................................................................................................................................................17200.10200000000011000000
AAAAGCATTGGCCGCTT.........................................................................................................................................................................................................................................................................................................................................................................................17120.08100000000001000000
.AAAGCATTGGCCGCTTACT......................................................................................................................................................................................................................................................................................................................................................................................19120.08100000000001000000
AAAAGCATTGGCCGCTTACA......................................................................................................................................................................................................................................................................................................................................................................................20120.08100000000001000000
.AAAGCATTGGCCGCTTACA......................................................................................................................................................................................................................................................................................................................................................................................19120.08100000000001000000
.AAAGCATTGGCCGCTTACAC.....................................................................................................................................................................................................................................................................................................................................................................................20120.08100000000001000000
...................ACTGCCGCTCAACTGTTTGCGCCCTTCT...........................................................................................................................................................................................................................................................................................................................................................28200.05100000001000000000
........................CGCTCAACTGTTTGCGCCCTTCTGGT........................................................................................................................................................................................................................................................................................................................................................26200.05100000000000010000
...................ACTGCCGCTCAACTGTTTGCGCC................................................................................................................................................................................................................................................................................................................................................................23200.05100000000001000000
.........................GCTCAACTGTTTGCGCCCTTCTGGAAA......................................................................................................................................................................................................................................................................................................................................................27200.05100000000000010000
.......................CCGCTCAACTGTTTGCGCCCTTCTGG.........................................................................................................................................................................................................................................................................................................................................................26200.05100010000000000000
......................GCCGCTCAACTGTTTGCGCCCTTCTGGCGT......................................................................................................................................................................................................................................................................................................................................................30200.05100000010000000000
....................CTGCCGCTCAACTGTTTGCGCCCTTCTGGCGTG.....................................................................................................................................................................................................................................................................................................................................................33200.05100000010000000000
...........................TCAACTGTTTGCGCCCTTCTGGCAAC.....................................................................................................................................................................................................................................................................................................................................................26200.05100000000010000000
.................ACACTGCCGCTCAACTGTTTGCGCCC...............................................................................................................................................................................................................................................................................................................................................................26200.05100010000000000000
.......................CCGCTCAACTGTTTGCGCCCTTCTGGCGT......................................................................................................................................................................................................................................................................................................................................................29200.05100000001000000000
............................CAACTGTTTGCGCCCTTCTG..........................................................................................................................................................................................................................................................................................................................................................20200.05100000010000000000
........................CGCTCAACTGTTTGCGCCCTTCTGGCGTGAAC..................................................................................................................................................................................................................................................................................................................................................32200.05100000010000000000
.........................GCTCAACTGTTTGCGCCCTTCTGGACA......................................................................................................................................................................................................................................................................................................................................................27200.05100000001000000000
...................................TTGCGCCCTTCTGGCGTG.....................................................................................................................................................................................................................................................................................................................................................18200.05100000000001000000
.........GGCCGCTTACACTGCCGCTCAACTGTA......................................................................................................................................................................................................................................................................................................................................................................27200.05100000000010000000
..............CTTACACTGCCGCTCAACTGTTTGCGC.................................................................................................................................................................................................................................................................................................................................................................27200.05100000010000000000
droSec2
ACAACT--A-------------------------------------------------------AAAATATCCCTAACGAAT------------------------AATA-AAAA----AATGTTCATTGAAGTGGAAAAC--AAAACGGCGACTACT-GTCGATTATATTAACACTCCTG-----------AAAAATTA-----------------------CACAT-TTATTTTT-------------------------------------------------------AT--------TAATAAGAACCT-TAA--------------TTTCTTTTTCAGTTCAACAACCAAACTTGTCACATCCTTTCCATTTGCATGGTTACGGATTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
TCGAAC--T-----------------------------------------------------------------------------------------------------------------------------AGGAAAC--AAAACGGCGAC------TCGATTATATTAACACTCCTA-----------AAAAATTA-----------------------CACAT-ATT--TTGGGATCAGATTTTAAACATCCAAGCAGATTAAAACTTTTTTGCAGTGAACTAGTAAAT--------TATTAAGATCCT-TAATTTCTTTCTCATCTTTTATTTTGCAGTTCAACAACCCAATTTGTCACATCCTTTCCATTTGCACGGTTACGGGTTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................CTTTCCATTTGCACGGTTACGGG...2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TCCTTTCCATTTGCACGGTTACGGGT..2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TCACATCCTTTCCATTTGCACGGT.........2412.0020000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TTTGTCACATCCTTTCCATTTGCACGG..........2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................T-ATT--TTGGGATCAGATTTTAAACATC..........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TTTCCATTTGCACGGTTACGGGTT.2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TTTCCATTTGCACGGTTACGGGTTC2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TATATTAACACTCCTA-----------AAAA......................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TTTCTTTCTCATCTTTTATTTTGCAG..................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CCTTTCCATTTGCACGGTTACGGGT..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ACATCCTTTCCATTTGCACGG..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CCATTTGCACGGTTACGGGT..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................AATTTGTCACATCCTTTCCATTTGCACG...........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TCAACAACCCAATTTGTCA..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TCCTTTCCATTTGCACGGTTACGGG...2511.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................AT--------TATTAAGATCCT-TAGG...........................................................................1890.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
droEre2
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTTTCAGTTCAACAACCCAATTTGTCACATCCTTTCCATTTGCACGGATACGGTTTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
ACAAGCATTGGCCGCTTACACTGCCGCTCAACTGCTTGCGCCCTTCTGGCGTGATCA-------GAAATCATCCTACCGAACATCATCCTACCAGCAACAATGACCATTATAAAT----AACGTTCATGAAAGTAAAGTTCTTAATACAGCAAATACAT-AAGATTGAATTATAGCTACAGCTGATTCTAATAAAAATTA-----------------------ACCAA-TTTGGACT-------------------------------------------------------AC--------TAATAAAAAT------------------------------------------------------------------------------GTTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................TACACTGCCGCTCAACTGCTTGCGCCC...............................................................................................................................................................................................................................................................................................................................................................2722.00402200000000
..................................................................AATCATCCTACCGAACATCATCCTACC.............................................................................................................................................................................................................................................................................................................2711.00101000000000
...............TTACACTGCCGCTCAACTGCTTGC...................................................................................................................................................................................................................................................................................................................................................................2420.50100010000000
................TACACTGCCGCTCAACTGCTTGCGCC................................................................................................................................................................................................................................................................................................................................................................2620.50100100000000
...............TTACACTGCCGCTCAACTGCTTGCGCCCT..............................................................................................................................................................................................................................................................................................................................................................2920.50100100000000
ACAAGCATTGGCCGCTTACACTGCCGC...............................................................................................................................................................................................................................................................................................................................................................................27200.20404000000000
.CAAGCATTGGCCGCTTACACTGCCGCT..............................................................................................................................................................................................................................................................................................................................................................................27200.10200200000000
.CAAGCATTGGCCGCTTACACTGCCGC...............................................................................................................................................................................................................................................................................................................................................................................26200.10202000000000
......ATTGGCCGCTTACACTGCCGC...............................................................................................................................................................................................................................................................................................................................................................................21200.10202000000000
.CAAGCATTGGCCGCTTACACTGCCG................................................................................................................................................................................................................................................................................................................................................................................25200.10202000000000
.......TTGGCCGCTTACACTGCCGCTCAAC..........................................................................................................................................................................................................................................................................................................................................................................25200.10200200000000
....GCATTGGCCGCTTACACTGCCGC...............................................................................................................................................................................................................................................................................................................................................................................23200.05101000000000
.......TTGGCCGCTTACACTGCCGCTCAACT.........................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
...AGCATTGGCCGCTTACACTGC..................................................................................................................................................................................................................................................................................................................................................................................21200.05100100000000
.......TTGGCCGCTTACACTGCCGCTCAACTG........................................................................................................................................................................................................................................................................................................................................................................27200.05100100000000
droEug1
AACAGAATGCATCGTTAAGCCTAATATTAAGCTGTTTA--ATTTTATAAAACTATTA-------ATAATTATCCCAGGTACTATATTTTTCCTAAAATGTTTGCATTTCTTTAATAAAAATTGTTTATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAT-TAA----------ATTTTTCTCTACGTAGTTCAACAACCAAACTTGTCTCACCCATTCCATTTGCACGGATACGGGTTTSizeHit CountTotal NormTotal
No Reads
droBia1
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCCAGTTCAACAGCCCAACTTGTCACATCCTTTCCATTTGCATGGATACGGATTTSizeHit CountTotal NormTotal
No Reads
droTak1
TAATAC--CCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTA-----------CAAGAGTATACAAATATGACTGACTTAATGA------------------------------------------------------------------------------------------T-T--------------ATTCTTTTATGCAGTCCAGCAGCCCAACTTGTCGCATCCTTTTCATTTGCACGGGTACGGGTTTSizeHit CountTotal NormTotal
No Reads
droEle1
TAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCTTTATGCAGTTCAACAGCCTAACTTGTCGCACCCTTTCCATTTGCACGGATACGGGTTTSizeHit CountTotal NormTotal
No Reads
droRho1
TAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTAATAA--------------------------------------------------------------------------------------------T--------------TATTCTTTATGCAGTTCAACAGCCCAATTTGTCGCATCCCTTCCACTTGCATGGATACGGGTTTSizeHit CountTotal NormTotal
No Reads
droFic1
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGTTGCAGTTCAACAGCCCAACTTGTCCCATCCTTTTCATTTGCACGGATATGGCTTTSizeHit CountTotal NormTotal
No Reads
droKik1
AAGCGC--TGGCCGCTTACACTGCCGCTCAGAAATTCGCGCCCTTCTGGCGTGAATATGATCGATGACCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCGTAACSizeHit CountTotal NormTotal
No Reads
droAna3
CTGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTA-------------------A---TATGTCTCATTTTT-------------------------------------------------------GTCAGTATTATAATAATAATCTGTAA-------------TTATTTTATTTAGTTCAACAGCCCAACTTGTCTCATCCATTCCACTTACATGGATATGGATTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................................................................................CAGCCCAACTTGTCTCATCCA........................2111.001100000
droBip1
ATCATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATACTAA--------------------------------------------------------------------------------------------A--------------ATTATTTTGTTTAGTTCAACAACCCAATTTGTCTCATCCGTTCCACTTGCACGGATATGGATTTSizeHit CountTotal NormTotal
No Reads
dp5
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGTAGTGCAACAACCAAACTTGTCGCATCCATTTCACTTGCACGGATACGGGTTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................CCATTTCACTTGCACGGATACGG....2312.0020200000000
droPer2
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGTAGTGCAACAACCAAACTTGTCGCATCCATTTCACTTGCACGGATACGGGTTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
ACTAAT--G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------A-A--------------ATATTATTTCGCAGTACAACAACCAAATCTCTCGCATCCCTTCCATTTGCACGGCTATGGATTCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGTGCAACAGCCAAACCTGTCACATCCCTTCCATTTGCACGGCTACGGATTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................GCACGGCTACGGATTC1611.001000000000000000000000000000000000000000000000000000000001000000
droMoj3
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGTACAACAACCCAATCTGTCCCATCCATTCCATTTGCATGGTTATGGCTTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACAGTTCAACAACCCAACTTGTCGCATCCATTCCATTTGCACGGCTACGGCTTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 07:02 PM