ID:

dsi_27554

 Coordinate:

2l:5352079-5352286 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.3 -20.2 -20.2

Flybase annnotation

five_prime_UTR [2l_5352314_5352881_+]; exon [2l_5352314_5352979_+]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------#######################
TAAATATCATTTCTCTTCATTTTGCGACCATGATTGTTTCTTTCGAAAATGTGAGGTGTCAACCCTGGCGATAGAGAAGAGAGCAAAACCACTCAAACGAAACGCACTCAACGCGAATGATGCGGCGTAAAGTTCGTTCAACTGGCAAATGCAGTGACCGTTCAACCCGCGATAACGATAACAAAAGAATCTCAAGGCTGCTTGCAATTGCATTTCTGATTATTCTCTCTCTTTTTCTCTCTCTTATTCCAACCGCAGCCGCAAAAACAAACTCAAACTCGAGCTAATCGCCGCATAAATTTGCTGTT
*******************************************************************************************************........((((..(((.((((((.......)).(((.(((.......)))))))))))))...))))..............(((((.(((.((.(((........))).)).)))..))))).....................************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 M053
female body
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 GSM343915
embryo
 M025
embryo
 M024
male body
...................................................................................................................................................................................................................................TCTCTTTTTCTCTCTCCTAT............................................................. 20 1 2 32.00 64 1 26 0 8 11 10 0 0 5 0 2 1
................................................................CTGGGGATAGAGAAGAGAGCA............................................................................................................................................................................................................................... 21 1 1 27.00 27 25 0 0 2 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CTCTCTTTTTCTCTCTCTTAT............................................................. 21 0 1 13.00 13 0 0 10 0 0 0 3 0 0 0 0 0
.................................................................TGGGGATAGAGAAGAGAGCAA.............................................................................................................................................................................................................................. 21 1 1 9.00 9 9 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCTCTCTTTTTCTCTCTCCTAT............................................................. 22 1 1 7.00 7 0 3 0 1 0 0 0 0 1 0 1 1
..............................................................TACTGGGGATAGAGAAGAGAG................................................................................................................................................................................................................................. 21 3 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCAGTCTTTTTCTCTCTCTTATT............................................................ 23 2 2 5.00 10 1 2 0 2 0 5 0 0 0 0 0 0
..............................................................TACTGGGGATAGAGAAGAGAGC................................................................................................................................................................................................................................ 22 3 1 4.00 4 3 0 0 1 0 0 0 0 0 0 0 0
..................................................................GGGGATAGAGAAGAGAGCAAA............................................................................................................................................................................................................................. 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...............................................................ACTGGGGATAGAGAAGAGAGC................................................................................................................................................................................................................................ 21 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CTTTTTCTCTCTCCTATT............................................................ 18 1 4 3.00 12 0 1 0 0 3 1 0 4 0 3 0 0
..................................................................................................................................................................................................................................CTCTCTTTTTCTCTCTCTTA.............................................................. 20 0 1 3.00 3 0 0 2 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................TCTCTTTTTCTCTCTCCTA.............................................................. 19 1 4 2.50 10 2 1 0 1 1 5 0 0 0 0 0 0
................................................................CTGGGGATAGAGAAGAGAGC................................................................................................................................................................................................................................ 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
................................................................CTGGGGATAGAGAAGAGAGCAA.............................................................................................................................................................................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CATTCTTTTTCTCTCTCTTAT............................................................. 21 2 3 1.33 4 0 4 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCTTTCTTTTTCTCTCTCCTAT............................................................. 22 2 2 1.00 2 0 1 0 0 0 0 0 0 1 0 0 0
.......................................................................................................GCACTCAACGCGAATGATGCGGC...................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
....................................................................................................................................................................................................................................CTCTTTTTCTCTCTCCTAT............................................................. 19 1 3 1.00 3 0 3 0 0 0 0 0 0 0 0 0 0
...............................................................ACTGGGGATAGAGAAGAGAG................................................................................................................................................................................................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................TTTTCTCTCTCCTATTCGAACC...................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................................................TCTCTCTTTTTCTCTCTCTTAT............................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCACTCTTTTTCTCTCTCCTATT............................................................ 23 2 2 1.00 2 0 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CTCTCTTTTTCTCTCTCCTAT............................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CTCTCTTTTTCTCTCTCTT............................................................... 19 0 3 1.00 3 0 0 3 0 0 0 0 0 0 0 0 0
.................................................................TGGGGATAGAGAAGAGAGCAAA............................................................................................................................................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCTGTCTTTTTCTCTCTCTTAT............................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................GGGATAGAGAAGAGAGCAAAC............................................................................................................................................................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TTCTGATTATTCTCTCTC............................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................TGGGGATAGAGAAGAGAGCA............................................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCTCACTTTTTCTCTCTCTTAT............................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................................................TCTCTCTTTTTCTCTCTCCTATT............................................................ 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................CTGGGGATAGAGAAAAGAGCA............................................................................................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TCTTTTTCTCTCTCCTATT............................................................ 19 1 2 1.00 2 0 0 0 0 2 0 0 0 0 0 0 0
..................................................................................................................GAATGATGCAGGGTAAAGATC............................................................................................................................................................................. 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................................................TCTGTCTTTTTCTCTCTCTTA.............................................................. 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCTCTCTTTTTCTCTCTCCTA.............................................................. 21 1 3 0.67 2 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCTGTCTTTTTCTCTCTCCTATT............................................................ 23 2 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TATCTCTTTTTCTCTCTCCTAT............................................................. 22 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................................CTCAGTCTTTTTCTCTCTCTTAT............................................................. 23 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCTCTCTTTTTCTCTCTCCTATC............................................................ 23 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TCTCTTTTTCTCTCTCCTATA............................................................ 21 2 4 0.50 2 0 0 0 0 1 1 0 0 0 0 0 0
............................................................................................................................................ACTGGCAGATGCAGTGAAAGTT.................................................................................................................................................. 22 3 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................................CTATCTTTTTCTCTCTCCTAT............................................................. 21 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CACTCTTTTTCTCTCTCATAT............................................................. 21 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCTGTTTTTTTCTCTCTCTTAT............................................................. 22 2 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................................................TCATTCTTTTTCTCTCTCTTAT............................................................. 22 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CTGTCTTTTTCTCTCTCCTATT............................................................ 22 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................GAAGTGAGCAAAACCA......................................................................................................................................................................................................................... 16 1 7 0.29 2 0 0 0 0 0 0 0 2 0 0 0 0
.....................................................................................................................................................................................................................................TCTTTTTCTCTCTCGTAT............................................................. 18 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCAGTCTTTTTCTCTCTTTTATT............................................................ 23 3 8 0.25 2 0 0 0 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTGATTATTGTCTGTCTT........................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................................TCTCCTTTTCTCTCTCCTAT............................................................. 20 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCAGTCTTTTTCTCTCTCTTATTT........................................................... 24 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TCAGTTTTTCTCTCTCTTAT............................................................. 20 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................TGTCTTTTTCTCTCTCCTATT............................................................ 21 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................AGAAGTGAGCAAAACCA......................................................................................................................................................................................................................... 17 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................................TTTTTCTCTCTCCTATT............................................................ 17 1 9 0.22 2 0 0 0 0 0 0 0 2 0 0 0 0
.................................................................................................................................................................................................................................TCTGTCTTTTTCTCTCTCGTATC............................................................ 23 3 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0
..................ATTTTGCGACCCTGA................................................................................................................................................................................................................................................................................... 15 1 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................................TCTCTTTTTCTCTCTCCTAA............................................................. 20 2 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TCTCTTTTTCTCTCTCCTATAA........................................................... 22 3 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................CTGTCTTTTTCTCGCTCATAT............................................................. 21 3 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TCTCTTTTTCTCTTTCCTAT............................................................. 20 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................................................................................................................................................................................TTTTCTCTCTCCTATTCGA......................................................... 19 2 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................................................TCTGTCTTTTTCACTCTCTTCT............................................................. 22 3 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................ATCGCATCACTGATTATTCT.................................................................................. 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TCTCAGTCTTTTTCTCTCTC................................................................. 20 2 18 0.11 2 0 0 0 0 0 0 0 2 0 0 0 0
........................................................................................................................................................................................................................TGATTTTTCTCCCTCTGTTTCT...................................................................... 22 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CTTTCTTTTTCTCTCTCCTA.............................................................. 20 2 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................TTTTTCTCTCTCCTATTCG.......................................................... 19 2 13 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0
..............................................AAATGTGAGATGTCA....................................................................................................................................................................................................................................................... 15 1 16 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................................CTTTTTCTCTCTCCTAGTCG.......................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

ATTTATAGTAAAGAGAAGTAAAACGCTGGTACTAACAAAGAAAGCTTTTACACTCCACAGTTGGGACCGCTATCTCTTCTCTCGTTTTGGTGAGTTTGCTTTGCGTGAGTTGCGCTTACTACGCCGCATTTCAAGCAAGTTGACCGTTTACGTCACTGGCAAGTTGGGCGCTATTGCTATTGTTTTCTTAGAGTTCCGACGAACGTTAACGTAAAGACTAATAAGAGAGAGAAAAAGAGAGAGAATAAGGTTGGCGTCGGCGTTTTTGTTTGAGTTTGAGCTCGATTAGCGGCGTATTTAAACGACAA
*************************************************************........((((..(((.((((((.......)).(((.(((.......)))))))))))))...))))..............(((((.(((.((.(((........))).)).)))..))))).....................******************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 O002
Head
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 M053
female body
 GSM343915
embryo
..........................................................AGTTGGGACTGCCATCTC........................................................................................................................................................................................................................................ 18 2 2 72.00 144 73 30 31 3 0 0 4 2 0 0 0 0 1
..........................................................AGTTGGGACTGCCATCTCAT...................................................................................................................................................................................................................................... 20 3 1 63.00 63 33 10 12 5 0 0 0 1 1 0 0 1 0
............................................................................................................................................................................................................................ATAAGAGAGAGAAAAAGAGAG................................................................... 21 0 1 13.00 13 0 0 0 0 10 3 0 0 0 0 0 0 0
..........................................................AGTTGGGACTGCCATCTCA....................................................................................................................................................................................................................................... 19 3 5 12.20 61 16 25 5 13 0 0 0 0 0 2 0 0 0
..............................................................ATGACCCCTATCTCTTCTCTC................................................................................................................................................................................................................................. 21 3 1 8.00 8 0 0 0 7 0 0 0 0 0 1 0 0 0
........................................................ATAGTTGGGACTGCCATCTC........................................................................................................................................................................................................................................ 20 3 1 6.00 6 2 1 2 1 0 0 0 0 0 0 0 0 0
...............................................................TGACCCCTATCTCTTCTCTCG................................................................................................................................................................................................................................ 21 2 1 4.00 4 0 0 0 3 0 0 0 0 0 1 0 0 0
...................................................................CCCTATCTCTTCTCTCGTTTG............................................................................................................................................................................................................................ 21 2 1 3.00 3 0 0 0 1 0 0 0 0 2 0 0 0 0
.............................................................................................................................................................................................................................TAAGAGAGAGAAAAAGAGAG................................................................... 20 0 1 3.00 3 0 0 0 0 2 1 0 0 0 0 0 0 0
................................................................GACCCCTATCTCTTCTCTCGT............................................................................................................................................................................................................................... 21 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0
..................................................................CCCCTATCTCTTCTCTCGTTT............................................................................................................................................................................................................................. 21 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0
........................................................ATAGTTGGGACTGCCATCT......................................................................................................................................................................................................................................... 19 3 2 1.50 3 1 0 1 0 0 0 1 0 0 0 0 0 0
..........................................................AGTTGGGACTGCCATCT......................................................................................................................................................................................................................................... 17 2 3 1.33 4 0 0 0 1 0 0 3 0 0 0 0 0 0
..........................................................GGTTGGGACTGCCATCTC........................................................................................................................................................................................................................................ 18 3 20 1.15 23 9 11 3 0 0 0 0 0 0 0 0 0 0
..........................................................AGTTGGGACCGCCATCTCAT...................................................................................................................................................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................TAGTTGGGACTGCCATCTC........................................................................................................................................................................................................................................ 19 3 2 1.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................AGTTGGGACTGCTATCCC........................................................................................................................................................................................................................................ 18 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................ATAAGAGAGAGAAAAAGAGAGA.................................................................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................CAGTTGGGACTGCCATCT......................................................................................................................................................................................................................................... 18 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................CTATCTCTTCTCTCGTTTGGT.......................................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TCTGGCAAGTTGGGCGCTATT..................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................TGACCGTTTACGGCACCGGCA................................................................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGAGTTTGCTTTGCGTGAGTT..................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................CCGCATTTCAAGCAAGTTGAC.................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................AACTGGCAAGTTGGGCGCTATT..................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................GTTGGGACTGCCATCTC........................................................................................................................................................................................................................................ 17 2 7 1.00 7 0 0 0 4 0 0 0 1 0 2 0 0 0
...........................................................GTTGGGACTGCCATCTCAT...................................................................................................................................................................................................................................... 19 3 7 0.71 5 2 0 1 1 0 0 0 0 0 0 0 1 0
..............................................................................................................................................................................................................................AAGAGAGAGAAAAAGAGAG................................................................... 19 0 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CGAGAGAGAAAAAGAGAGA.................................................................. 19 1 19 0.53 10 0 0 0 0 7 3 0 0 0 0 0 0 0
..........................................................AGTGGGGACTGCCATCTC........................................................................................................................................................................................................................................ 18 3 15 0.33 5 3 0 2 0 0 0 0 0 0 0 0 0 0
...................AAAACGCTGTTACTAATAA.............................................................................................................................................................................................................................................................................. 19 2 6 0.33 2 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CGCTATTGCTATTGT............................................................................................................................. 15 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................TCAAGCAAGTTGAACGT................................................................................................................................................................. 17 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................GTTGCGCTTTCTTCGCAGCA.................................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................AGAGAGAGAAAAAGAGTGA.................................................................. 19 1 13 0.15 2 0 0 0 0 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................AGAGAGAGAAAAAGAGTG................................................................... 18 1 20 0.15 3 0 0 0 0 3 0 0 0 0 0 0 0 0
...........................................................................CTTCACTCGTTTTGGT......................................................................................................................................................................................................................... 16 1 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................GTTGGGACTGCCATCT......................................................................................................................................................................................................................................... 16 2 16 0.13 2 0 0 0 0 0 0 2 0 0 0 0 0 0
............................................................................................................................................................................................................................................................GGGGTCGGCGTTTTTGGTT..................................... 19 2 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................GGGGTCGGCGTTTTTGGTTAA................................... 21 3 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................AAAGGCTGGTACTAA................................................................................................................................................................................................................................................................................. 15 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................TTCAAGCCAGTTGCCCG.................................................................................................................................................................. 17 2 9 0.11 1 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................................................GGGGTCGGCGTTTTTGGTTA.................................... 20 3 20 0.10 2 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TCAAGCAAGCTGAACGT................................................................................................................................................................. 17 2 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0
..........................................................AGTTGGGACTGCCATCTT........................................................................................................................................................................................................................................ 18 3 20 0.10 2 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................TCACTCGTTTTGGTG........................................................................................................................................................................................................................ 15 1 20 0.10 2 0 0 0 0 0 0 0 2 0 0 0 0 0
...............................................................GGACTGCCATCTCTTATC................................................................................................................................................................................................................................... 18 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................GAGTCCCGACGAACG....................................................................................................... 15 1 11 0.09 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................................AGAAAGAGAATAAGGT......................................................... 16 1 12 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................GGCACCATTGCTATTGTTGT.......................................................................................................................... 20 3 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................GGTTGGCGGCGGCGTT............................................ 16 1 13 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................GGCAAGCTGGGCCCTA....................................................................................................................................... 16 2 15 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................TAGTTGGGACTGCCATCT......................................................................................................................................................................................................................................... 18 3 17 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................CTGACAGGTTGGGCGC......................................................................................................................................... 16 2 18 0.06 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................................................AGGTTCGTGTCGGCTTTTTT......................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................................................................TCGGCGTTTTTGGTTTAG.................................. 18 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GAGAGAGAAAAAGAGAGAA................................................................. 19 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................GGTCGGCGTTTTTGTTTAA................................... 19 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CTCCGGCAAGTTGGGC........................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................................................................................GAAAGAGAATAAGGT......................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:5352029-5352336 + dsi_27554 TAAATATCATT---TC-TCTTCATTT---T--------GCGACCATGATTGTTT---CTTTCG-AAAATGTGAGGTGTCAACCCTG-GCGATAGAGAAGAGAG---CAAAA-CCACTCAAACGAAACG-----------------------------------------------------------------------------------------------CACTCAAC--------------------GCGAA--------------------------------------------------TGATGCGGCGT-----------------------------------------------------------------------------------AAAGTTCGTTCAACTGGCAAATGCA--G------------------------------------------TGACCGTTCAACC--------CGCGATAACGATAACA--AAAGAATCTCAAGGCTGCTTGCAAT----------------------TGC-----------------------------ATTTCTGATTATTC-TCTC-----------TCTTTTTCT---CTCT------------------CTT----ATTCCAA--CCGCA--GCCGCAAAAACAAACTCA-AACTCG-AGCTAATCGCCGCATAAATTTGC-TGTT
droSec2 scaffold_5:3625373-3625680 + TAAATATCATT---TC-TCTTCAT-A---T--------CCGACCATGATTGTTT---CTTTCA-AAAATGTGAGGTGTCAACCCTG-GCGATAGAGAAGAGAG---CAAAATCCACTCAAACGAAACG-----------------------------------------------------------------------------------------------CACTCAAC--------------------GCGAA--------------------------------------------------AGATGCGGTGT-----------------------------------------------------------------------------------AAAGTTCGTTCAACTGGCAAATGCA--G------------------------------------------TGACCGTTCAACC--------CGCGATAACGATAACA--AAAGTATCTCAAGGTTGCTTGCAAT----------------------TGC-----------------------------ATTTCTGATTATTC-TCTC-----------TATTTTTCT---CTCT------------------CTT----ATTCCAA--CCGCA--GCCGCAAAAACAAACTCA-AACTCG-AGCTAATCGCTGCATAAATTTGC-TGTT
dm3 chr2L:5546975-5547282 + TAAATATAATT---TC-TCTTCTTCT---T--------CCGACCATGATTGTTT---CTTTTA-AAAATGTTAGGTGTCAACCCTGT-CGATAGAGAAGAGAG---CAAAATCCACTCAAACGAAACG-----------------------------------------------------------------------------------------------CACTCAAC--------------------GCGAG--------------------------------------------------AGATGCGGT-T-----------------------------------------------------------------------------------AAAGTTCGTTCAACTGGCAAATGCA--G------------------------------------------TGACCGTTTAACC--------CGCGATAACGATAACA--AAAGTATCTCAAGGTTGCTTGCAAT----------------------TGC-----------------------------ATTTCTGATTATTC-TCTC-----------TCTTTTTCT---CTCT------------------CTT----ATTCCAA--CCGCA--GCCGCAAAAACAAACTCA-AACTCG-AGCTAATCGCTGCATAAATTTGC-TGTT
droEre2 scaffold_4929:5633459-5633789 + TAAATATAATT---TT-TCTTCTTTT---T--------CCGCCCCTGACTGTGT---CTTTCA-ATAATGTGAGGTGTCAACCCTGTGCGACAATAAAGAGAGAGGTAAAA-GCACTCAAATAAAACG-----------------------------------------------------------------------------------------------CACTCAACGT-----AAACCACTCAAAGGCGAA--------------------------------------------------AGATGCGGCTT-----------------------------------------------------------------------------------AGAGTTCGTTCAACTGGAAAATGCA--G------------------------------------------TGACCGTTCAACC--------CGCGATAACGATAACA--AAAGTATCTCAAGGTTGCTCCCAGT----------------------TGC-----------------------------ATTTCTGATTATC--------------------TCTTAT---TTTTGTTAGCC-----GCAGAGCGT----ATTCCAA--CCGCA--GCCGCAAAAACAAACTCA-AACGCG-AGCTAATCGCTGCATAAATT-GC-TGTT
droYak3 2L:13647424-13647749 - TAAATATA-TT------TCTTCTTTT---T--------CCGGCGCTGACTGTTT---CTTTTA-ATTTTGTGAGGTGTCAACCCTGTGCGACAATAAAGAGAG---CA-AG-TCACTCAGACGAAACG-----------------------------------------------------------------------------------------------CACTCAATGC-----AAACCACTCAAAGGCGAG--------------------------------------------------AGATGCGGTTT-----------------------------------------------------------------------------------AAAGTTCGTTCAACTGGAAAATGCA--G------------------------------------------TGACCGTTCAACC--------CGCGATAACGATAACA--AAAGTATCTCAAGGTTGCTCGCAGT----------------------TGC-----------------------------ATTTCTGATTATA----------------------CTCTCTTTTTCTTCAGCC-----GCAGAGCGT----ATTTCAA--CCGCA--GCCGCAAAAACAAACTCA-AACTCGCAGCTAATCGCTGCATAAATT-GC-TGTT
droEug1 scf7180000409767:99472-99878 + TATTTTTAGGT---GC-----------------------------------------------------------TGTCAATCCTATAAGATA----------------AA-GTACTCAAGAGT----G--TTAAAAAC---CAGTTCTTTCAAATACAAGA------------AACG-------G----------AGATACA--CAGAGGGAGTTCCGAATG---------CAGAAAAAACCACTCAAGAGCGAATATACAACT---GTGCCT-------AAAAGATGCCTTAGTAAAGAGAAATAAACGCCGGTT-----------------------------------------------------------------------------------GAAGTTCATTCAACTGAAGAATGAAATGAAAAGAGAG------AC--TTCTA---CG-----GTAAACCATGACCACTTAACC--------CGCGATAACGATAACAC-AAAGTATCTCAAGGTTGCA----AC----------------------TGC-----------------------------ATTTGCGATTATC-AAATATACATATATAATGTATTTCT---CTTTATCAGCC-----AAAGAGCGT----ATTTCAA--CCACA--ACCGCAAAAACAAACTCA-AACTCG-AGCTAATCGCTGCATAAATT-GC-CTTT
droBia1 scf7180000302422:6893423-6893658 + C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------------------CTCAAGAGCGCA--------------------------------------------------AGCTGCGGGGC----------------------------------------------------------------------------------AGGAGTTCATTCAACTGGGAGATGCA--GG---------------AG-CTAAC---CG-----CAAAACCCTGACCGTTCGACC--------GGCGATAACGATAGCAA-AAAGTATCTCAAGGCTGCG---AAG----------------------TGC-----------------------------ATTCGCGATTACC-ACATGCACACG--------CGTTCT---CTTCATCAGCC-----GGAGAGCGT-----TTTCGA--CCGCA--ACCGCAAGTGCGAACTCA-AACTCG-AGCTAATCGCTGCATAAATT-GC-CGTC
droTak1 scf7180000415708:223329-223778 + AGAATGTAACCGGCTTTTCC----------ACCG----C-----CTGCCTATTTTCCACTTTGAA-----CAAGGTGTCAACTCTGGCCGATT----------------AA-ACACTCAAGAGC----G--CCAAA-----------------------------------------------------GATAC--AGATACA--GAGGGGGAGTTCTAGATG---------CATAACGAACCACTCAAGAGCGAA--------------------------------------------------AGATGCGGTTTAAAGTGGGAGTTCATTAAACTGAGAGAAACAAAAATACAATATCGATATAAGACTCAAGAGCACGCGATGCGGCTTG-AGGTGGGAGTTCATTCAACTGGAAAATACA--GAG---AGTG------AAGCCTACC---CA-----CAGAACCCTGACCGCTCAACC--------CGCGATAACGATAACAA-AAAGTATCTCAAGGTTGCA---AAC----------------------TGC-----------------------------ATTTGTGATTACC-ATACGAA------------CACTCT---CTTTATCAGCC-----AAAGAGCGT----ATTGCGA--CCGCA--ACCGCAAGTACAAACTCA-AACTCG-AGCTAATCGCTGCATAAATT-GC-CGTT
droEle1 scf7180000491338:409661-410108 + CATTTTG----------CCATTTTTTTCCT--------CC--CCATAATT-TCC---TTTTCGAA-----CGATGTGTCAACCCTGTGCGACA---------------AAA-ACACTCAAGAGC----A--CA-AA---------------------------------------ACG-------GAAAGATCCATTGATACAAAAAAAGGGAGTTCTGGAGGCA-------------------CTCAAGAGCGAA--------------------------------------------------AAATGCGGTTTGAAATGTAAGTTCATTAAACTGAGAGATAAAAAGATACAATATCGGAACAAAACTCAAGAGAGTAATATGCGGCTCAAAAGTTGAAGTTCATTCAACTGAAAAATACT--GAGAAGAGAG------AAGCAAAGCGAAAAAAAACCAAAACCCTGACCGCCCAACC--------TGCGATAACGATAACAA-AAAGTATCTCAAGGTTGCA----AC----------------------TGC-----------------------------ATTTGCGATTATTCATATATA------------TATTCT---CTTAATCAGCT-----GAAGAGCGT----ATTTCGA--CCACA--GCCGCAA-AACAAACTCAAAACTTG-G----------GCATAAATT-GC-AGGT
droRho1 scf7180000780102:37880-38302 + CCACTTT----------CCTGTTTTT---T--------C-----CTGAACTT-T---TTTTCGAA-----CTATGTGTCAACCCTATGCGAAA----------------AA-ACACTCAAGAGA----G--CTAAA---------------------------------------ACA-------GAA--------AGATACA--AAAAGGCAGTACTCTATGCA-------------------CTCAAGAGCGAA--------------------------------------------------AAATGCGGCTTGAAGTGGGAGTTCATTAAACTGAGAGATACAAAGATACAA-----------CGCTCAAGAGTGTAATATGCGGCTCA-AAGTGGGAGTTCATTCAACTGGAACATACA--GAGAAGAGTGTTCCCGAAGCAACG-GAATA-----CAAAACCATGACCGCTCAACC--------TGCGATAACGATAACAA-AAAGTATCTCAAGGTTGCA----AC----------------------TGC-----------------------------ATTGACGATTATTCAAA-------------TATTATTCT---CTTTATCAGCT-----GAAGAGCGT----ATTTCAA--CCG--------CAA-AACGAACTCAAAACTCG-AGCTAATCGCTGCATAAATT-GC-CGGT
droFic1 scf7180000453842:687279-687434 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACCGTTCAACC--------CGCGATAACGATAACAA-AAAGTATCTCAAGGTTGCA----AC----------------------TGC-----------------------------ATTGGCGATTATT-AAA----------------TATTCT---CTTTATCAGCT-----GAAGAGCGT----ATT-CGA--CCGCA--ACCGCAA-AACAAACTCA-AACTCG-AGCTAATCGCCGCATAAATT-GC-CCGT
droKik1 scf7180000302643:254406-254677 - TAAAAACCGGC---TTTTTG----------ACTTT---GTGC------------------TCC-------AGAGGTGGCAACTCTT-AAAAA----------------AAA-ACACTCATACG---------------------------------------------------------------------------------------------------------------------------------C--------------------------------------------------------AGTGGG-G-----------------------------------------------------------------------------------GAAGTTCATTCAACCG----ATGCA--G------------------------------------AAACCCTGACTGTAAAACCCCGACCCTTG------TGATAACAA-AAAGTATCTCAAGGTTTTC----GC--------------TGCGCCTCTGCTGC--------------------------ATT-CTGAGCGTTCGAA---A------------AAGGCT---CTTTATCAGCG--GCCAGAGAGTGA----ATT-CGTAACCACA--ACCGCAA-AACAAACTCAGAACTCG-AG----TTGCCGCATAAATT-GC-CAGT
droAna3 scaffold_12916:4479276-4479606 + CCAACAACATT---AC--------------------------------------------TCGAA-----CGATGTGGCAACTTTGGTCGATA----------------AA-TCACTCAAACAA-AGTCACTCGAAAAT---GGGTTCATTCAACTGCATTTGCAGAAGAAGAGAATCCATCCAAG----------AGA---------------------------------------------------------TACACAAGGGGAGAACCT-------AAAGTATCTCTC-----------------------------------------------------------------------------------------------------------------------------AGATGC----------------------------------------AATCCCTGACCATAAGACC--------TGCGATAA------GAGCAAAGTATCTCAAGGTTGCT----TC----------------------TGCTGCCTGACTGTCGAATGCAGTTGGCCGGC--TTGCGATTA------------------------TTCT---CTTTATCAGT-------GAGAGCGTT---A-TTCGA--CCGCAGAACCGCAA-AACAAACTCA-AAACCG-AGATAATCGCCACATAAATT-GCCAGCC
droBip1 scf7180000396737:305713-306073 - GACATTGGGGT---GTCCCA----------AATGGGTGCCCAACATGAC-----------TCGAA-----CGATGTGGCAACTTTGGTCGATA----------------AA-TCACTCAAGCAA-AGTCACTC--AAACCGCGGGTTCATTCAACTGCAATTGCAGA---AGAGAACGCATCCAAG----------AGA---------------------------------------------------------TACACAGGGGGAGAACCTGTAAAGTAAAGTATCTCTC-----------------------------------------------------------------------------------------------------------------------------AGATGC----------------------------------------AAACCCTGACCAAA-GACC--------TGCGATAA------GAGCAAAGTATCTCAAGGTTGCT----GC----------------------TGCTGCCTGATTGTCGAATGCAGTTGGCCGGC--TTGCGATTA------------------------TTCT---CTTTATCAGT-------GAGAGCGTCCACA-TTCGA--CCACAGAACCGCAA-AACAAACTCA-AACCCG-AGATAATCGCCGCATAAATT-GCCAGCC
dp5 4_group1:4865400-4865567 + GGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACCG--A------------------------------------------TGACCGATGAA-C--------TGCGAT------AACAG-AAAGTATCTCAAGGTTGCTG-CAAATTCTTTTGTTTTCG------------------------------------------TTGCAAT---TA-TGCC-----------TGTACTTCG---CTTTATCAGCCAAGCCAGAGAGCG----------------------CCGGAGTAGCAACCGCA-AACACA-GGCTAATCGCCGCTCAAACGCAA-TGCA
droPer2 scaffold_5:351539-351706 - GGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACCG--A------------------------------------------TGACCGATGAA-C--------TGCGAT------AACAG-AAAGTATCTCAAGGTTGCTG-CAAATTCTTTTGTTTTCG------------------------------------------TTGCAAT---TA-TGCC-----------TGTACTTCC---CTTTATCAGCCAAGCCAGAGAGCG----------------------CCGGAGTAGCAACCGCA-AACACA-GGCTAATCGCCGCTCAAACGCAA-TGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TAAATATCATT---TC-TCTTCATTT---T--------GCGACCATGATTGTTT---CTTTCG-AAAATGTGAGGTGTCAACCCTG-GCGATAGAGAAGAGAG---CAAAA-CCACTCAAACGAAACG-----------------------------------------------------------------------------------------------CACTCAAC--------------------GCGAA--------------------------------------------------TGATGCGGCGT-----------------------------------------------------------------------------------AAAGTTCGTTCAACTGGCAAATGCA--G------------------------------------------TGACCGTTCAACC--------CGCGATAACGATAACA--AAAGAATCTCAAGGCTGCTTGCAAT----------------------TGC-----------------------------ATTTCTGATTATTC-TCTC-----------TCTTTTTCT---CTCT------------------CTT----ATTCCAA--CCGCA--GCCGCAAAAACAAACTCA-AACTCG-AGCTAATCGCCGCATAAATTTGC-TGTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC-----------TCTTTTTCT---CTCT------------------CTT----AT....................................................................21113.0013000031000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC-----------TCTTTTTCT---CTCT------------------CTT----A.....................................................................2013.00300001200000000000
...............................................................................................................................G-----------------------------------------------------------------------------------------------CACTCAAC--------------------GCGAA--------------------------------------------------TGATGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTC-----------TCTTTTTCT---CTCT------------------CTT----AT....................................................................2211.00100000100000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC-----------TCTTTTTCT---CTCT------------------CTT----......................................................................1931.00300000300000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGATTATTC-TCTC-----------TC.............................................................................................................1811.00100001000000000000
droSec2
TAAATATCATT---TC-TCTTCAT-A---T--------CCGACCATGATTGTTT---CTTTCA-AAAATGTGAGGTGTCAACCCTG-GCGATAGAGAAGAGAG---CAAAATCCACTCAAACGAAACG-----------------------------------------------------------------------------------------------CACTCAAC--------------------GCGAA--------------------------------------------------AGATGCGGTGT-----------------------------------------------------------------------------------AAAGTTCGTTCAACTGGCAAATGCA--G------------------------------------------TGACCGTTCAACC--------CGCGATAACGATAACA--AAAGTATCTCAAGGTTGCTTGCAAT----------------------TGC-----------------------------ATTTCTGATTATTC-TCTC-----------TATTTTTCT---CTCT------------------CTT----ATTCCAA--CCGCA--GCCGCAAAAACAAACTCA-AACTCG-AGCTAATCGCTGCATAAATTTGC-TGTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCA-AACTCG-AGCTAATCGCT.................2311.0010001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--CCGCA--GCCGCAAAAACAAACT......................................2211.0010001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-AGCTAATCGCTGCATAAATTTGC-TG..2611.0010001
dm3
TAAATATAATT---TC-TCTTCTTCT---T--------CCGACCATGATTGTTT---CTTTTA-AAAATGTTAGGTGTCAACCCTGT-CGATAGAGAAGAGAG---CAAAATCCACTCAAACGAAACG-----------------------------------------------------------------------------------------------CACTCAAC--------------------GCGAG--------------------------------------------------AGATGCGGT-T-----------------------------------------------------------------------------------AAAGTTCGTTCAACTGGCAAATGCA--G------------------------------------------TGACCGTTTAACC--------CGCGATAACGATAACA--AAAGTATCTCAAGGTTGCTTGCAAT----------------------TGC-----------------------------ATTTCTGATTATTC-TCTC-----------TCTTTTTCT---CTCT------------------CTT----ATTCCAA--CCGCA--GCCGCAAAAACAAACTCA-AACTCG-AGCTAATCGCTGCATAAATTTGC-TGTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTC-----------TCTTTTTCT---CTCT------------------CTT----AT....................................................................2214.0040000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................G-----------------------------------------------------------------------------------------------CACTCAAC--------------------GCGAG--------------------------------------------------AGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTC-----------TCTTTTTCT---CTCT------------------CTT----......................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
....................TCTTCT---T--------CCGACCATGATTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................CACTCAAC--------------------GCGAG--------------------------------------------------AGATGC.................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTTCT---CTCT------------------CTT----AT....................................................................1822.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000010000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TGT-CGATAGAGAAGAGAG---CA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000
..............................................................................CAACCCTGT-CGATAGAGAAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ATATAATT---TC-TCTTCTTCT---T--------C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................ATCCACTCAAACGAAACG-----------------------------------------------------------------------------------------------CACTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAACTCA-AACTCG-AGCTAATC....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................CACTCAAACGAAACG-----------------------------------------------------------------------------------------------CACTCAAC--------------------GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
droEre2
TAAATATAATT---TT-TCTTCTTTT---T--------CCGCCCCTGACTGTGT---CTTTCA-ATAATGTGAGGTGTCAACCCTGTGCGACAATAAAGAGAGAGGTAAAA-GCACTCAAATAAAACG-----------------------------------------------------------------------------------------------CACTCAACGT-----AAACCACTCAAAGGCGAA--------------------------------------------------AGATGCGGCTT-----------------------------------------------------------------------------------AGAGTTCGTTCAACTGGAAAATGCA--G------------------------------------------TGACCGTTCAACC--------CGCGATAACGATAACA--AAAGTATCTCAAGGTTGCTCCCAGT----------------------TGC-----------------------------ATTTCTGATTATC--------------------TCTTAT---TTTTGTTAGCC-----GCAGAGCGT----ATTCCAA--CCGCA--GCCGCAAAAACAAACTCA-AACGCG-AGCTAATCGCTGCATAAATT-GC-TGTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
TAAATATA-TT------TCTTCTTTT---T--------CCGGCGCTGACTGTTT---CTTTTA-ATTTTGTGAGGTGTCAACCCTGTGCGACAATAAAGAGAG---CA-AG-TCACTCAGACGAAACG-----------------------------------------------------------------------------------------------CACTCAATGC-----AAACCACTCAAAGGCGAG--------------------------------------------------AGATGCGGTTT-----------------------------------------------------------------------------------AAAGTTCGTTCAACTGGAAAATGCA--G------------------------------------------TGACCGTTCAACC--------CGCGATAACGATAACA--AAAGTATCTCAAGGTTGCTCGCAGT----------------------TGC-----------------------------ATTTCTGATTATA----------------------CTCTCTTTTTCTTCAGCC-----GCAGAGCGT----ATTTCAA--CCGCA--GCCGCAAAAACAAACTCA-AACTCGCAGCTAATCGCTGCATAAATT-GC-TGTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
TATTTTTAGGT---GC-----------------------------------------------------------TGTCAATCCTATAAGATA----------------AA-GTACTCAAGAGT----G--TTAAAAAC---CAGTTCTTTCAAATACAAGA------------AACG-------G----------AGATACA--CAGAGGGAGTTCCGAATG---------CAGAAAAAACCACTCAAGAGCGAATATACAACT---GTGCCT-------AAAAGATGCCTTAGTAAAGAGAAATAAACGCCGGTT-----------------------------------------------------------------------------------GAAGTTCATTCAACTGAAGAATGAAATGAAAAGAGAG------AC--TTCTA---CG-----GTAAACCATGACCACTTAACC--------CGCGATAACGATAACAC-AAAGTATCTCAAGGTTGCA----AC----------------------TGC-----------------------------ATTTGCGATTATC-AAATATACATATATAATGTATTTCT---CTTTATCAGCC-----AAAGAGCGT----ATTTCAA--CCACA--ACCGCAAAAACAAACTCA-AACTCG-AGCTAATCGCTGCATAAATT-GC-CTTTSizeHit CountTotal NormTotal
No Reads
droBia1
C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------------------CTCAAGAGCGCA--------------------------------------------------AGCTGCGGGGC----------------------------------------------------------------------------------AGGAGTTCATTCAACTGGGAGATGCA--GG---------------AG-CTAAC---CG-----CAAAACCCTGACCGTTCGACC--------GGCGATAACGATAGCAA-AAAGTATCTCAAGGCTGCG---AAG----------------------TGC-----------------------------ATTCGCGATTACC-ACATGCACACG--------CGTTCT---CTTCATCAGCC-----GGAGAGCGT-----TTTCGA--CCGCA--ACCGCAAGTGCGAACTCA-AACTCG-AGCTAATCGCTGCATAAATT-GC-CGTCSizeHit CountTotal NormTotal
No Reads
droTak1
AGAATGTAACCGGCTTTTCC----------ACCG----C-----CTGCCTATTTTCCACTTTGAA-----CAAGGTGTCAACTCTGGCCGATT----------------AA-ACACTCAAGAGC----G--CCAAA-----------------------------------------------------GATAC--AGATACA--GAGGGGGAGTTCTAGATG---------CATAACGAACCACTCAAGAGCGAA--------------------------------------------------AGATGCGGTTTAAAGTGGGAGTTCATTAAACTGAGAGAAACAAAAATACAATATCGATATAAGACTCAAGAGCACGCGATGCGGCTTG-AGGTGGGAGTTCATTCAACTGGAAAATACA--GAG---AGTG------AAGCCTACC---CA-----CAGAACCCTGACCGCTCAACC--------CGCGATAACGATAACAA-AAAGTATCTCAAGGTTGCA---AAC----------------------TGC-----------------------------ATTTGTGATTACC-ATACGAA------------CACTCT---CTTTATCAGCC-----AAAGAGCGT----ATTGCGA--CCGCA--ACCGCAAGTACAAACTCA-AACTCG-AGCTAATCGCTGCATAAATT-GC-CGTTSizeHit CountTotal NormTotal
No Reads
droEle1
CATTTTG----------CCATTTTTTTCCT--------CC--CCATAATT-TCC---TTTTCGAA-----CGATGTGTCAACCCTGTGCGACA---------------AAA-ACACTCAAGAGC----A--CA-AA---------------------------------------ACG-------GAAAGATCCATTGATACAAAAAAAGGGAGTTCTGGAGGCA-------------------CTCAAGAGCGAA--------------------------------------------------AAATGCGGTTTGAAATGTAAGTTCATTAAACTGAGAGATAAAAAGATACAATATCGGAACAAAACTCAAGAGAGTAATATGCGGCTCAAAAGTTGAAGTTCATTCAACTGAAAAATACT--GAGAAGAGAG------AAGCAAAGCGAAAAAAAACCAAAACCCTGACCGCCCAACC--------TGCGATAACGATAACAA-AAAGTATCTCAAGGTTGCA----AC----------------------TGC-----------------------------ATTTGCGATTATTCATATATA------------TATTCT---CTTAATCAGCT-----GAAGAGCGT----ATTTCGA--CCACA--GCCGCAA-AACAAACTCAAAACTTG-G----------GCATAAATT-GC-AGGTSizeHit CountTotal NormTotal
No Reads
droRho1
CCACTTT----------CCTGTTTTT---T--------C-----CTGAACTT-T---TTTTCGAA-----CTATGTGTCAACCCTATGCGAAA----------------AA-ACACTCAAGAGA----G--CTAAA---------------------------------------ACA-------GAA--------AGATACA--AAAAGGCAGTACTCTATGCA-------------------CTCAAGAGCGAA--------------------------------------------------AAATGCGGCTTGAAGTGGGAGTTCATTAAACTGAGAGATACAAAGATACAA-----------CGCTCAAGAGTGTAATATGCGGCTCA-AAGTGGGAGTTCATTCAACTGGAACATACA--GAGAAGAGTGTTCCCGAAGCAACG-GAATA-----CAAAACCATGACCGCTCAACC--------TGCGATAACGATAACAA-AAAGTATCTCAAGGTTGCA----AC----------------------TGC-----------------------------ATTGACGATTATTCAAA-------------TATTATTCT---CTTTATCAGCT-----GAAGAGCGT----ATTTCAA--CCG--------CAA-AACGAACTCAAAACTCG-AGCTAATCGCTGCATAAATT-GC-CGGTSizeHit CountTotal NormTotal
No Reads
droFic1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACCGTTCAACC--------CGCGATAACGATAACAA-AAAGTATCTCAAGGTTGCA----AC----------------------TGC-----------------------------ATTGGCGATTATT-AAA----------------TATTCT---CTTTATCAGCT-----GAAGAGCGT----ATT-CGA--CCGCA--ACCGCAA-AACAAACTCA-AACTCG-AGCTAATCGCCGCATAAATT-GC-CCGTSizeHit CountTotal NormTotal
No Reads
droKik1
TAAAAACCGGC---TTTTTG----------ACTTT---GTGC------------------TCC-------AGAGGTGGCAACTCTT-AAAAA----------------AAA-ACACTCATACG---------------------------------------------------------------------------------------------------------------------------------C--------------------------------------------------------AGTGGG-G-----------------------------------------------------------------------------------GAAGTTCATTCAACCG----ATGCA--G------------------------------------AAACCCTGACTGTAAAACCCCGACCCTTG------TGATAACAA-AAAGTATCTCAAGGTTTTC----GC--------------TGCGCCTCTGCTGC--------------------------ATT-CTGAGCGTTCGAA---A------------AAGGCT---CTTTATCAGCG--GCCAGAGAGTGA----ATT-CGTAACCACA--ACCGCAA-AACAAACTCAGAACTCG-AG----TTGCCGCATAAATT-GC-CAGTSizeHit CountTotal NormTotal
No Reads
droAna3
CCAACAACATT---AC--------------------------------------------TCGAA-----CGATGTGGCAACTTTGGTCGATA----------------AA-TCACTCAAACAA-AGTCACTCGAAAAT---GGGTTCATTCAACTGCATTTGCAGAAGAAGAGAATCCATCCAAG----------AGA---------------------------------------------------------TACACAAGGGGAGAACCT-------AAAGTATCTCTC-----------------------------------------------------------------------------------------------------------------------------AGATGC----------------------------------------AATCCCTGACCATAAGACC--------TGCGATAA------GAGCAAAGTATCTCAAGGTTGCT----TC----------------------TGCTGCCTGACTGTCGAATGCAGTTGGCCGGC--TTGCGATTA------------------------TTCT---CTTTATCAGT-------GAGAGCGTT---A-TTCGA--CCGCAGAACCGCAA-AACAAACTCA-AAACCG-AGATAATCGCCACATAAATT-GCCAGCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
GACATTGGGGT---GTCCCA----------AATGGGTGCCCAACATGAC-----------TCGAA-----CGATGTGGCAACTTTGGTCGATA----------------AA-TCACTCAAGCAA-AGTCACTC--AAACCGCGGGTTCATTCAACTGCAATTGCAGA---AGAGAACGCATCCAAG----------AGA---------------------------------------------------------TACACAGGGGGAGAACCTGTAAAGTAAAGTATCTCTC-----------------------------------------------------------------------------------------------------------------------------AGATGC----------------------------------------AAACCCTGACCAAA-GACC--------TGCGATAA------GAGCAAAGTATCTCAAGGTTGCT----GC----------------------TGCTGCCTGATTGTCGAATGCAGTTGGCCGGC--TTGCGATTA------------------------TTCT---CTTTATCAGT-------GAGAGCGTCCACA-TTCGA--CCACAGAACCGCAA-AACAAACTCA-AACCCG-AGATAATCGCCGCATAAATT-GCCAGCCSizeHit CountTotal NormTotal
No Reads
dp5
GGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACCG--A------------------------------------------TGACCGATGAA-C--------TGCGAT------AACAG-AAAGTATCTCAAGGTTGCTG-CAAATTCTTTTGTTTTCG------------------------------------------TTGCAAT---TA-TGCC-----------TGTACTTCG---CTTTATCAGCCAAGCCAGAGAGCG----------------------CCGGAGTAGCAACCGCA-AACACA-GGCTAATCGCCGCTCAAACGCAA-TGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................................................................CCG--A------------------------------------------TGACCGATGAA-C--------TGCGA.........................................................................................................................................................................................................................................2112.0020200000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CG--A------------------------------------------TGACCGATGAA-C--------TGCGAT------A.................................................................................................................................................................................................................................2211.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTATCTCAAGGTTGCTG-C......................................................................................................................................................................................................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCG----------------------CCGGAGTAGCAACCGT.....................................2011.0010000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCG--A------------------------------------------TGACCGATGAA-C--------TG............................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAT---TA-TGCC-----------TGTACTTCG---C..................................................................................................2111.0010100000000
droPer2
GGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACCG--A------------------------------------------TGACCGATGAA-C--------TGCGAT------AACAG-AAAGTATCTCAAGGTTGCTG-CAAATTCTTTTGTTTTCG------------------------------------------TTGCAAT---TA-TGCC-----------TGTACTTCC---CTTTATCAGCCAAGCCAGAGAGCG----------------------CCGGAGTAGCAACCGCA-AACACA-GGCTAATCGCCGCTCAAACGCAA-TGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................G--A------------------------------------------TGACCGATGAA-C--------TGCGAT------AACAG-A...........................................................................................................................................................................................................................2611.001100000

Generated: 05/19/2015 at 11:14 AM