ID:

dsi_2752

 Coordinate:

2l:20755384-20755533 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.3 -32.2 -32.2

Flybase annnotation

five_prime_UTR [2l_20755205_20755383_+]; exon [2l_20755205_20755383_+]; intron [2l_20755384_20756014_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGCACCTAGGTGCCCAAACACAACAAAATGGAAACGTATAAAAATCAAAAGTGAGTATGCACCAAGCTAAACTCTCGATAATTTCGCAATTTCGCACGCACACTACCGCACTTTGCGTTGCACATTTATTGTTGCTGCACGTGTGTTGGTGGCACTGCCTTGTATGGATTCTCTATTGACCGTGCTAACGTGGCAAATCAAAACTCAGTGGGGCATGCCACCTGCTAAAGGTAAAGAAATTGGCTGACGC
*********************************************************........((((......(((.....))).......(((.((.(((((.(((((..((((..(((((.....)).))))))).))))).)))))))..)))...((((((..((......)))))))).....))))******************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 GSM343915
embryo
 SRR902009
testis
 M023
head
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
.................ACACAACAAAATGGAAACGTAT................................................................................................................................................................................................................... 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
.........................................................TGCACCAAGCTAAACTCTCGATA.......................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......TAGGTGCCCAAACACAACAAAATGGA.......................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................................AAGGTAAAGAAATTGGCTG.... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
..............CAAACACAACAAAATGGAAACGG..................................................................................................................................................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
................AACACAACAAAATGGAGACGTAT................................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..CACCTAGGTGCCCAAACACAACAAA............................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................TGGATTCTCTATTGACCGTGCTAACGTGGC........................................................ 30 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............CAAACACAACAAAATGGAAACGT..................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..........TGCCCAAACACAACAAAATGGAAACGTA.................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...................ACAACAAAATGGAAACGTA.................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CACCTGCTAAAGGTAAAGAAATTGGCTG.... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................GCTGCACGTGTGTTGGTG................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
................AACACAACAAAATGGAAACGT..................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................CACAACAAAATGGAAACGT..................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................ACAACAAAATGGAAACGTATAAA................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................ACAACAAAATGGAAACGT..................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
................AACACAACAAAATGGAAACGTATAAAA............................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................TTGCGTTGCACATTCATTGTT..................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................GACTGTGCTAACGTGGCTTA..................................................... 20 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................AATCGGGACTCAGTGGGGCAT.................................. 21 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................GCTAGAGGTAGAGAAATT......... 18 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................................................................................................TCAAAACTTGGTGGGGCTTG................................. 20 3 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................TGTTGATGCACGCGTCTTG...................................................................................................... 19 3 14 0.07 1 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TCGTGGATCCACGGGTTTGTGTTGTTTTACCTTTGCATATTTTTAGTTTTCACTCATACGTGGTTCGATTTGAGAGCTATTAAAGCGTTAAAGCGTGCGTGTGATGGCGTGAAACGCAACGTGTAAATAACAACGACGTGCACACAACCACCGTGACGGAACATACCTAAGAGATAACTGGCACGATTGCACCGTTTAGTTTTGAGTCACCCCGTACGGTGGACGATTTCCATTTCTTTAACCGACTGCG
********************************************************........((((......(((.....))).......(((.((.(((((.(((((..((((..(((((.....)).))))))).))))).)))))))..)))...((((((..((......)))))))).....))))********************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
.................................................................................AAACCGATAAAGCGCGCGTGTGAT................................................................................................................................................. 24 3 1 1.00 1 1 0 0
...........................................................................................................................................................................................................................TGGCCGATTTCTATTTTTTTAA......... 22 3 7 0.29 2 0 2 0
..GTGGACCCACGGGTT......................................................................................................................................................................................................................................... 15 1 17 0.06 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:20755334-20755583 + dsi_2752 AGCACCTA-GGTGCCC--AAACA--CAA----CAA--AATGGAAACGTATAAAAATCAAAAGTGAGTATGCAC------------CAAG------------CTAAACTC------TCGATAATTTCGCAATTTCG------C----ACGCA----------CACTACCGCACTT-TGCGTTGCAC-------ATTT-------------A---TTGTTGCTGCACGT----GTGT-------TGGTG--------------GCA------------------CTGCCTTGTATGGATTCTCT---ATTGA-----------------CCGTGCTAACGTGGCAAAT-CAA---------------------AAC------------T----------C-----A---GTGGGGCATGCCAC------------------CTGCTA--A---AGGTAAA--------GAAATTGGCTGACGC
droSec2 scaffold_18:1239981-1240230 + AGCACCGA-GGTGCCC--AAACA--CAA----CAA--AATGGAAACGTATAAAAATCAAAAGTGAGTATGCAC------------CAAG------------CTAAACTC------TCGATAGTTTCGCAATTTCG------C----ACGCA----------CACTACCGCACTT-TGCGTTGCAC-------ATTC-------------A---TTGTTGCTGCACGT----GTGT-------TGGTG--------------GCA------------------CTGCCTTGTATGCATTCTCT---ATTGA-----------------CCGTGCTAACGTGGCAAAT-CAA---------------------AAC------------T----------C-----A---GTGGGGCATGCCAC------------------CTGCTA--A---AGGTAAA--------GAAATTGGCTGACGC
dm3 chr2L:21310983-21311234 + AGCACCTA-GGTGCCC--AAACA--CAA----CAA--AATGGAAACGTATAAAAATCAAAAGTGAGTATACAC------------CAAG------------CTAAATTC------TCGCTAATTTCGCAATTTAT------C----ACGCA----------CACTGCCGCACTT-GGCGTTCTAC-----TCATTC-------------A---TTGTTGCTGCACGT----GTGT-------TGGTG--------------GCA------------------TTGCCTTGTATGGATTTTCA---ATTGA-----------------CCGGGCGAACGTGGCAAAT-CAA---------------------AAC------------T----------C-----A---GTGGGGCATGCCAC------------------CTGGTA--A---AGGTAAA--------GAAATTGGCTGACGC
droEre2 scaffold_4845:3187095-3187343 - AGCACCTA-GGTGCCC--AAACA--CAA----CAA--AATGGAAACGTATAAAAATCAACCGTGAGTATAAAC------------CAAG------------TAACATTC------TCGCTAATTTCGCAATTTAC------C----ACGCA----------CACTGCCTCACTC-GGCGTTGCAC-------ATTT-------------A---TTGTTGCTGCACTT----GTGT-------TGGTA--------------GTA------------------TTGCCTTGTATGGATTCCTT---ATTGA-----------------CCATGCAAACGTGGCAAAT-GAA---------------------AAC------------T----------C-----A---GTGGGGCATGCCAC------------------TTGGTG------ATGTAGA--------GAAATTGGCTGACGC
droYak3 2R:1468437-1468686 - AGCACTTA-AGTGCCC--AACCA--CAA----CAA--AATGGAAACGTATAAAAATCAACCGTGAGTATGCAC------------CAAG------------TTAAACTC------TTGCTAATTTCGCAATTTAC------C----ACGGA----------CACCGCCGCCCTC-AGCGTTGCAT-------ATTT-------------A---TTGTAGCTTTACTT----GTGT-------TAGTG--------------GTA------------------TTGCCTTGTATGGATTCTCT---ATTGC-----------------CCATGCTAACGTGGCAAAT-CAA---------------------AAT------------T--------------------GTGAGGCATGCCAC------------------CTGGTGGTA---AGGTAGA--------GAAATTGGCTGACGC
droEug1 scf7180000409063:98150-98398 - AGCACCTT-GGTGCCC-CAAACA--CAA----CAA--AATGGAAACGAATAAAAAACAATCGTGAGTATGCTC------------CAAA------------TAGTACAT------TCGCTAATTTCGCAATTTTC------C----ACGCA----------CACTGCCGGACTTTGGCGTTGCAC-------ATTC-------------A---TTATTGATGCACGT----GTGT-------TTGTG--------------GAA------------------TCGGCTTGTATGGATTCTCG---GTTTG-----------------CTTTGCT-ACGTGGCAATT-CAG----------------------CCCC--A----A-GG----------T-----G---ATGGGGCATGCAAC------------------C-----------AGGTAGA--------GAAATCGGCTGACGC
droBia1 scf7180000302422:3620976-3621245 - TGCACCTA-GGTGCCC--TAACA--CAA----CAA--AATGGAAACGTTTAAAAAACAATCGTGAGTATGCCG------------CAAG------------TCGAACGT------TTGCGAATTTCGCAATGACT------C----ACGCA----------CACTGCGGCACTTCGGCGTTGCAC-------ATTC-------------G---TCGCTGCTGCACGT----GTGT-------GTGTG--------------GTA------------------TCCGCTTTTATGGATTCCCGACGATTGG-CCCATTCA---AAGG-CCATGCTAACGTGGCAAAC-TCA---------------------AACCG--A----T-GG----------CGAGCGA---ATGGGGCATGCAAC------------------C-----------AGGTAGA--------GAAATTGGCTGACGC
droTak1 scf7180000415871:147916-148177 - CGCACCTA-GGTGCCC-CAAACA--CAA----CAA--AATGGAAACGTATAAAAAACAATCGTGAGTATGCCTAA-AA-T---------------------CAAAACGC------TTGCTAATTTCGCAATGTCC------C----ACGCA----------CACTGGCGCACCTCGGCGTTGCAC-------ATTC-------------A---TTGTTGCTGCACGT----GTGT-------TTGTG--------------GGA------------------TCGGCTTGTATGGATTCTCG---ATTGG-CCAG-------T-GG-CCATGTTAACGTGGCAAAT-CCA---------------------AACCC--CCGG-G-GG----------C-----C---ATGGGGCATGCAAC------------------C-----------AGGTAGA--------GAAATTGGCTGACGC
droEle1 scf7180000491046:2796074-2796351 - AGCACCTT-GGTGCCC-CAAACA--CAA----CAA--AATGGAAACGTATAAAAAAGCATCGTGAGTACACCTAAAAATT---------------------CAAAACGC------TTGCTAATTTCGCAATGTCC------C----ACGCA----------CACTGCTGCACTTTGGCGTTGCAA-------ATTC-------------A---TTGTTGTTGCACGT----GTGT-------GTGTGTGTGTGTGTGTATGGGA------------------ACGGCTTATATGGATTCTCG---TTTAG-----------------CACTGTTAACGTGGCAAGT-GCT--TAATGCAAA---------CAATCC--A----A-GG----------C-----A---ATGGGGCATGCAAC------------------C-----------AGGTAGA--------GAAATTGGCTGACGC
droRho1 scf7180000767948:17019-17282 - AGCACCTT-GGTGCCC-CAAACA--CAA----CAA--AATGGAAACGTATAAAAAACCATCGTGAGTATTCCTTAAAA-----------------------TCAAACGC------TTGCTAATTTCGCAATGTCC------C----ACGCA----------CACTGCCGCACTTTGGCGTTGCAA-------ATTC-------------A---TTGTTGCTGCACGT--GTGTGT-------GTGTG--------------GGA------------------ACGGCTTATATGGATTCTCG---TTTAG-----------------CACTGTTAACGTGGCAAGT-GCA--AAATGCAGA---------AAATCG--A----A-GT----------C-----A---ATGGGGCATGCAAC------------------C-----------AGGTAGA--------GAAATTGGCTGACGC
droFic1 scf7180000453932:466878-467128 + AGCACCTA-GGTGCCC-CAAATA--CAA----CAA--AATGGAAACGTATAAAAAACAATCGTGAGTATGCCC------------CAAA------------CGGTTGGC------ACGCCAATTTCGCAGTGTC-------C----TCGCA----------CACTGACGCACTTGTACGTTGCAA-------ATTC-------------A---CCGATGCTGCACGT----GTGT-------TTGTG--------------TAG------------------TCGGCTTGTATGGATTCTCG---TTCAG-----------------CACCTTCAACGTGGCAAAA-CGA---------------------AACTC--A----A-CG----------C-----T---ATGTGGCATGCCAC------------------T-------G---AGGTAGG--------GAAATTGGCTGACGC
droKik1 scf7180000302273:283660-283950 - CGCACCAA-GGTGCCC-C-AACACACAA----CAA--AATGGAAACGTATAAAAAGCAAACGTAAGTACGCAA--AAA-T---------------------C-GAACATTCGGAAACGCTAATTTCGCAATGACTCGCAAAC----ACACA----------CACTGCCGCACTTTGGCGTTGCAC-------CGTT-------------T---CTGGCGCTGCAAGCATGTGTGT-------GTGTG-----------------------------------CGGGCTTGTACGGATTCTCG---TTTGGGCC-G------CA-ACGCAGTGTTAACGTGGCATAT-ACA-GT--TGCAAATCCCATTCCAAATCC--A----A-GG----------C-----A---ATGGGGCATGCAAC------------------C-----------AGGTAGA--------GAAATTGGCTGACGC
droAna3 scaffold_12916:10917945-10918238 - AGCACCTA-GGTGCCC-CAAACACACA-----AAA--AATGGAAACGTATACAAAACTCCCGTGAGTATTCGC-------------------------------AATGA------TTATTAATTTCACAATCCCCC-----T----TTGCA----------CACTGTTGCAGA--GCGGTTGCACATTCCCCATTT-------------A---TTGTAGCTGT----------GTGTCAAGTTTGTG--------------A-ATCACCCGCCACATGTACACAGGCTTGTATGGATTCTAG---TTTGG-CCTCCTCCTCCC-CC-CCATGTTAACGTGGCAAAT-TCG---------------------GATCG--A----A-GG----------C-----A---ATGTGGCATGCAAC------------------CAGGCGAAAAGCAGGTGTA--------CACATTGGCTGACGC
droBip1 scf7180000396572:577655-577935 - -GCACTTA-GGTGCCC-CAAACACACA-----AAA--AATGGAAACGTATACAAAACTCCCGTGAGTATTCGC-------------------------------AATGA------TTATTAATTTCACAATCGCCT-----T----TTGCA----------CACTGTTGCAGA--GCGGTTGCACATTCCCCATTT-------------A---TTGTAGTTGTGTGT----GG------CGTTTGTG--------------A-ATCACCCTCCACATGTA---CAAGTTGTATGGATTCTAG---TTTGG-CC---------T-CC-CCATGTTAACGTGGCAAAT-TCG---------------------CATCA--A----A-GG----------C-----A---ATGTGGCATGCAAC------------------CAGGCGAAAAGCAGGTGTA--------AACATTGGCTGACGC
dp5 4_group4:3448680-3448971 + AGCACCTA-GGTGCCT-C-AACA--CAAGAA-CAA--CATGGAAACGTATAAAAAGCAAGCGTAAGTGCGCCAAAAAA-TC-A---AAGTCCCATCCATCC---AACCA------TAACCCATTTCGCAATTTCCCGAAA-TCTGCACACA----------CACTGCCGCACG--GGTTTTGCAC-------ATTTATATT--------G---TTGTTACTGCCGCT----GTGT-------GTGTA--------------------------------------GCTTGTATGGTTTCTTG---TTTTC-----------------GCCTG-AGACGTGGCAAAAA-G-CCC----------------------AAT--GGAATTG----------C-----A---TTGGGGCATGCAACACACAC----A---CAC-ATGGAG------TGGCCAA--------AAGATTGGCTGACGC
droPer2 scaffold_10:2477927-2478218 + AGCACCTA-GGTGCCT-C-AACA--CAAGAA-CAA--CATGGAAACGTATAAAAAGCAAGCGTAAGTGCGCCAAAAAA-TC-A---AAGTCCCATCCATCC---AACCA------TAACCCATTTCGCAATTTCCCGAAA-TCTGCACACA----------CACTGCCGCACA--GGTTTTGCAC-------ATTTATATT--------G---TTGTTACTGCCGCT----GTGT-------GTGTG--------------------------------------GCTTGTATGGTTTCTTG---TTTTCGC-----------------C-AGAGACGTGGCAAAAA-G-CCC----------------------AAT--GGAATTG----------C-----A---TTGGGGCATGCAACACACAC----A---CAC-ATGGAG------TGGCCAA--------AAGATTGGCTGACGC
droWil2 scf2_1100000004884:806060-806375 + CGCACTTA-GGTGCCC--AAACA--CAACAATTAA--AATGGAATCGTATACACTAAAACGGTAAGTACTTT--------------AAA----------------TTGC------ATCCGTATTTCGCAATTCGTCACCAAC--ACATATA----------CA-CGCTCCTCT-AGTTGTTGCAA-------TTTC-------------G---TATTAGTTGCCGTT----ATGT-------GTGTCGGTAGTTGTAATGGGAA------------------TTAGTGAAAATCAATTCTTG---TTTTTGTG-C------CA-AC-TCATGGTAACGTGGCAAAAA-T-CAT-------A---------CAAACT---------TGGACACTGCGCCGAGAGACTTTTGGGGCATGCAACAACTACTGGTTCCA---AAAAG------ACTACTGGA--------GAAAATGGCTGACGC
droVir3 scaffold_12723:5566154-5566445 - AGCACGAACAGTGCCC-C-AACACACAA----AGT--TATGAAAATGTTAACAAAAATATTGTAAGTACCAAT----A-TTGAAC-AACTGCGAACAATGC-A-AGAGT------GCAACAATTTCGCAATGGCGCACAC--------ACACATGCACGCTCACAACCACACAC-GGACTTGTAT-------ATAA-------------ACAGTCATGGCTGCCAAT----GTGT-------TTGTT--------------GC-------------------CTGTT---------TTGTCG---AT--------------------TCATGGTAACGTGGCAGAAA-T-GTT------------------TACCA--C----T-TG----------------C---TTGTGGCATGCAACAGCCCAGTACTCCA---GACAGCGG-----TATCATT--------GAAATTGGCTGATGC
droMoj3 scaffold_6500:11148982-11149105 - AGCACGAATAGTGCCCACAAACA--CAA----AGT--TATGAAAATGTTAACAAAATACCTGTAAGTACTTA--AACA-TTGAACCAAG-------TGTA--CAAAGGT------GCAACAATTTCGCAATATTG------C----ACACA----------AATGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGC
droGri2 scaffold_15126:2320176-2320454 - AGCACGAC-AGTGCCC-AAAACACACAA----CAAATTATGAAAATGTTAACAAAAACAATGTGAGTACCAAT------------AAAA------GGGTT-CAACACGC------ACACAGATT-----------------T--TCGCACACATGCAA---AATTACTGCATTCCGA----------------TTT--GTTGTCTATAAA---CAGCTGCGGCG-GT--GTGTGT-------GTGTG--------------TAA------------------TTTTTTTG--TCGAT------------------------------TCATGGTAACGTGGCAGAAA-T-GTT-------------------AGCC--A----A-CT----------T-----T---CGGTGGCATGCCACAAAAAA----A---CCAAAAAAGGAATAACAGCTGGAGACGTCCATT-TAAGGGTGATGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGCACCTA-GGTGCCC--AAACA--CAA----CAA--AATGGAAACGTATAAAAATCAAAAGTGAGTATGCAC------------CAAG------------CTAAACTC------TCGATAATTTCGCAATTTCG------C----ACGCA----------CACTACCGCACTT-TGCGTTGCAC-------ATTT-------------A---TTGTTGCTGCACGT----GTGT-------TGGTG--------------GCA------------------CTGCCTTGTATGGATTCTCT---ATTGA-----------------CCGTGCTAACGTGGCAAAT-CAA---------------------AAC------------T----------C-----A---GTGGGGCATGCCAC------------------CTGCTA--A---AGGTAAA--------GAAATTGGCTGACGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................ACA--CAA----CAA--AATGGAAACGTAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200000000000000
....................................................................TGCAC------------CAAG------------CTAAACTC------TCGATA........................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
......TA-GGTGCCC--AAACA--CAA----CAA--AATGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................A---AGGTAAA--------GAAATTGGCTG....1911.00110000000000000000
...............C--AAACA--CAA----CAA--AATGGAAACGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
..CACCTA-GGTGCCC--AAACA--CAA----CAA--A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100001000000000000
....................................................................................................................................................................................................................................................................................................TGGATTCTCT---ATTGA-----------------CCGTGCTAACGTGGC...........................................................................................................................................3011.00100000001000000000
...............C--AAACA--CAA----CAA--AATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
...........TGCCC--AAACA--CAA----CAA--AATGGAAACGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
......................A--CAA----CAA--AATGGAAACGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CAC------------------CTGCTA--A---AGGTAAA--------GAAATTGGCTG....2811.00100100000000000000
..........................................................................................................................................................................................................................GCTGCACGT----GTGT-------TGGTG--------------............................................................................................................................................................................................................................1811.00100000000001000000
...................AACA--CAA----CAA--AATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.....................CA--CAA----CAA--AATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
......................A--CAA----CAA--AATGGAAACGTATAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
......................A--CAA----CAA--AATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000000100000
...................AACA--CAA----CAA--AATGGAAACGTATAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
droSec2
AGCACCGA-GGTGCCC--AAACA--CAA----CAA--AATGGAAACGTATAAAAATCAAAAGTGAGTATGCAC------------CAAG------------CTAAACTC------TCGATAGTTTCGCAATTTCG------C----ACGCA----------CACTACCGCACTT-TGCGTTGCAC-------ATTC-------------A---TTGTTGCTGCACGT----GTGT-------TGGTG--------------GCA------------------CTGCCTTGTATGCATTCTCT---ATTGA-----------------CCGTGCTAACGTGGCAAAT-CAA---------------------AAC------------T----------C-----A---GTGGGGCATGCCAC------------------CTGCTA--A---AGGTAAA--------GAAATTGGCTGACGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................TGCTGCACGT----GTGT-------TGGT...........................................................................................................................................................................................................................................1811.0010010
.......................................................................................................................................................................................................................................................................................................ATTCTCT---ATTGA-----------------CCGTGCTAACGT..............................................................................................................................................2411.0010010
.......................................................................................................................................................................................................................................................................................................................................................AAT-CAA---------------------AAC------------T----------C-----A---GTGGGGCATGC...............................................................2311.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------CTGCTA--A---AGGTAAA--------GAAATTGGCTGAC..2811.0010001
...................AACA--CAA----CAA--AATGGAAACGTATAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5011000
....................ACA--CAA----CAA--AATGGAAACGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010010
......................A--CAA----CAA--AATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010010
..................................A--AATGGAAACGTATAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010010
dm3
AGCACCTA-GGTGCCC--AAACA--CAA----CAA--AATGGAAACGTATAAAAATCAAAAGTGAGTATACAC------------CAAG------------CTAAATTC------TCGCTAATTTCGCAATTTAT------C----ACGCA----------CACTGCCGCACTT-GGCGTTCTAC-----TCATTC-------------A---TTGTTGCTGCACGT----GTGT-------TGGTG--------------GCA------------------TTGCCTTGTATGGATTTTCA---ATTGA-----------------CCGGGCGAACGTGGCAAAT-CAA---------------------AAC------------T----------C-----A---GTGGGGCATGCCAC------------------CTGGTA--A---AGGTAAA--------GAAATTGGCTGACGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.................................................................................................................................................................................................................................GT----GTGT-------TGGTG--------------GCA------------------TTGCCTTGT..............................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GCACGT----GTGT-------TGGTG--------------GCA------------------TTG....................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CA--CAA----CAA--AATGGAAACGTAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GGCAAAT-CAA---------------------AAC------------T----------C-----A---GTGGGG....................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AAACA--CAA----CAA--AATGGAAACGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGCACCTA-GGTGCCC--AAACA--CAA----CAA--AA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TA-GGTGCCC--AAACA--CAA----CAA--A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................ATTGA-----------------CCGGGCGAACGTGGCAA.........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGCACCTA-GGTGCCC--AAACA--CAA----CAA--AATGGAAACGTATAAAAATCAACCGTGAGTATAAAC------------CAAG------------TAACATTC------TCGCTAATTTCGCAATTTAC------C----ACGCA----------CACTGCCTCACTC-GGCGTTGCAC-------ATTT-------------A---TTGTTGCTGCACTT----GTGT-------TGGTA--------------GTA------------------TTGCCTTGTATGGATTCCTT---ATTGA-----------------CCATGCAAACGTGGCAAAT-GAA---------------------AAC------------T----------C-----A---GTGGGGCATGCCAC------------------TTGGTG------ATGTAGA--------GAAATTGGCTGACGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................AA--AATGGAAACGTATAAAAATC........................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000200
............GCCC--AAACA--CAA----CAA--AATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000200
...........................A----CAA--AATGGAAACGTATAAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000020
.................................AA--AATGGAAACGTATAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.......................................................................................................................................................................................................................................GTGT-------TGGTA--------------GTA------------------TTGCCTTGT..............................................................................................................................................................................................2111.0011000000
.....................................................................................................................................................................................................................................................................GTA------------------TTGCCTTGTATGGATTCCTT---................................................................................................................................................................................2311.0010000100
.....................................AATGGAAACGTATAAAAATC........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
...................AACA--CAA----CAA--AATGGAAACGTATAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
...................AACA--CAA----CAA--AATGGAAACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.........................CAA----CAA--AATGGAAACGTATAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000
.....................CA--CAA----CAA--AATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
..........................AA----CAA--AATGGAAACGTATAAAAATC........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
....................ACA--CAA----CAA--AATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
....................ACA--CAA----CAA--AATGGAAACGTAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
...................AACA--CAA----CAA--AATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...................AACA--CAA----CAA--AATGGAAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
..................................................................................................................................................ACGCA----------CACTGCCTCACTC-GGC...............................................................................................................................................................................................................................................................................................................2111.0011000000
droYak3
AGCACTTA-AGTGCCC--AACCA--CAA----CAA--AATGGAAACGTATAAAAATCAACCGTGAGTATGCAC------------CAAG------------TTAAACTC------TTGCTAATTTCGCAATTTAC------C----ACGGA----------CACCGCCGCCCTC-AGCGTTGCAT-------ATTT-------------A---TTGTAGCTTTACTT----GTGT-------TAGTG--------------GTA------------------TTGCCTTGTATGGATTCTCT---ATTGC-----------------CCATGCTAACGTGGCAAAT-CAA---------------------AAT------------T--------------------GTGAGGCATGCCAC------------------CTGGTGGTA---AGGTAGA--------GAAATTGGCTGACGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................CA--CAA----CAA--AATGGAAACGTATAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
..................................A--AATGGAAACGTATAAAAATCAACCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
............GCCC--AACCA--CAA----CAA--AATGGAAACGTAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
....CTTA-AGTGCCC--AACCA--CAA----.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.........................CAA----CAA--AATGGAAACGTATAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
....CTTA-AGTGCCC--AACCA--CAA----CAA--AATGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
..........................AA----CAA--AATGGAAACGTATAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..................AACCA--CAA----CAA--AATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
....................................................AAATCAACCGTGAGTATGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000100000
..............CC--AACCA--CAA----CAA--AATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
..........GTGCCC--AACCA--CAA----CAA--AAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
..........................AA----CAA--AATGGAAACGTATAAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
droEug1
AGCACCTT-GGTGCCC-CAAACA--CAA----CAA--AATGGAAACGAATAAAAAACAATCGTGAGTATGCTC------------CAAA------------TAGTACAT------TCGCTAATTTCGCAATTTTC------C----ACGCA----------CACTGCCGGACTTTGGCGTTGCAC-------ATTC-------------A---TTATTGATGCACGT----GTGT-------TTGTG--------------GAA------------------TCGGCTTGTATGGATTCTCG---GTTTG-----------------CTTTGCT-ACGTGGCAATT-CAG----------------------CCCC--A----A-GG----------T-----G---ATGGGGCATGCAAC------------------C-----------AGGTAGA--------GAAATCGGCTGACGCSizeHit CountTotal NormTotal
No Reads
droBia1
TGCACCTA-GGTGCCC--TAACA--CAA----CAA--AATGGAAACGTTTAAAAAACAATCGTGAGTATGCCG------------CAAG------------TCGAACGT------TTGCGAATTTCGCAATGACT------C----ACGCA----------CACTGCGGCACTTCGGCGTTGCAC-------ATTC-------------G---TCGCTGCTGCACGT----GTGT-------GTGTG--------------GTA------------------TCCGCTTTTATGGATTCCCGACGATTGG-CCCATTCA---AAGG-CCATGCTAACGTGGCAAAC-TCA---------------------AACCG--A----T-GG----------CGAGCGA---ATGGGGCATGCAAC------------------C-----------AGGTAGA--------GAAATTGGCTGACGCSizeHit CountTotal NormTotal
No Reads
droTak1
CGCACCTA-GGTGCCC-CAAACA--CAA----CAA--AATGGAAACGTATAAAAAACAATCGTGAGTATGCCTAA-AA-T---------------------CAAAACGC------TTGCTAATTTCGCAATGTCC------C----ACGCA----------CACTGGCGCACCTCGGCGTTGCAC-------ATTC-------------A---TTGTTGCTGCACGT----GTGT-------TTGTG--------------GGA------------------TCGGCTTGTATGGATTCTCG---ATTGG-CCAG-------T-GG-CCATGTTAACGTGGCAAAT-CCA---------------------AACCC--CCGG-G-GG----------C-----C---ATGGGGCATGCAAC------------------C-----------AGGTAGA--------GAAATTGGCTGACGCSizeHit CountTotal NormTotal
No Reads
droEle1
AGCACCTT-GGTGCCC-CAAACA--CAA----CAA--AATGGAAACGTATAAAAAAGCATCGTGAGTACACCTAAAAATT---------------------CAAAACGC------TTGCTAATTTCGCAATGTCC------C----ACGCA----------CACTGCTGCACTTTGGCGTTGCAA-------ATTC-------------A---TTGTTGTTGCACGT----GTGT-------GTGTGTGTGTGTGTGTATGGGA------------------ACGGCTTATATGGATTCTCG---TTTAG-----------------CACTGTTAACGTGGCAAGT-GCT--TAATGCAAA---------CAATCC--A----A-GG----------C-----A---ATGGGGCATGCAAC------------------C-----------AGGTAGA--------GAAATTGGCTGACGCSizeHit CountTotal NormTotal
No Reads
droRho1
AGCACCTT-GGTGCCC-CAAACA--CAA----CAA--AATGGAAACGTATAAAAAACCATCGTGAGTATTCCTTAAAA-----------------------TCAAACGC------TTGCTAATTTCGCAATGTCC------C----ACGCA----------CACTGCCGCACTTTGGCGTTGCAA-------ATTC-------------A---TTGTTGCTGCACGT--GTGTGT-------GTGTG--------------GGA------------------ACGGCTTATATGGATTCTCG---TTTAG-----------------CACTGTTAACGTGGCAAGT-GCA--AAATGCAGA---------AAATCG--A----A-GT----------C-----A---ATGGGGCATGCAAC------------------C-----------AGGTAGA--------GAAATTGGCTGACGCSizeHit CountTotal NormTotal
No Reads
droFic1
AGCACCTA-GGTGCCC-CAAATA--CAA----CAA--AATGGAAACGTATAAAAAACAATCGTGAGTATGCCC------------CAAA------------CGGTTGGC------ACGCCAATTTCGCAGTGTC-------C----TCGCA----------CACTGACGCACTTGTACGTTGCAA-------ATTC-------------A---CCGATGCTGCACGT----GTGT-------TTGTG--------------TAG------------------TCGGCTTGTATGGATTCTCG---TTCAG-----------------CACCTTCAACGTGGCAAAA-CGA---------------------AACTC--A----A-CG----------C-----T---ATGTGGCATGCCAC------------------T-------G---AGGTAGG--------GAAATTGGCTGACGCSizeHit CountTotal NormTotal
No Reads
droKik1
CGCACCAA-GGTGCCC-C-AACACACAA----CAA--AATGGAAACGTATAAAAAGCAAACGTAAGTACGCAA--AAA-T---------------------C-GAACATTCGGAAACGCTAATTTCGCAATGACTCGCAAAC----ACACA----------CACTGCCGCACTTTGGCGTTGCAC-------CGTT-------------T---CTGGCGCTGCAAGCATGTGTGT-------GTGTG-----------------------------------CGGGCTTGTACGGATTCTCG---TTTGGGCC-G------CA-ACGCAGTGTTAACGTGGCATAT-ACA-GT--TGCAAATCCCATTCCAAATCC--A----A-GG----------C-----A---ATGGGGCATGCAAC------------------C-----------AGGTAGA--------GAAATTGGCTGACGCSizeHit CountTotal NormTotal
No Reads
droAna3
AGCACCTA-GGTGCCC-CAAACACACA-----AAA--AATGGAAACGTATACAAAACTCCCGTGAGTATTCGC-------------------------------AATGA------TTATTAATTTCACAATCCCCC-----T----TTGCA----------CACTGTTGCAGA--GCGGTTGCACATTCCCCATTT-------------A---TTGTAGCTGT----------GTGTCAAGTTTGTG--------------A-ATCACCCGCCACATGTACACAGGCTTGTATGGATTCTAG---TTTGG-CCTCCTCCTCCC-CC-CCATGTTAACGTGGCAAAT-TCG---------------------GATCG--A----A-GG----------C-----A---ATGTGGCATGCAAC------------------CAGGCGAAAAGCAGGTGTA--------CACATTGGCTGACGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................AACACACA-----AAA--AATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.004020020
.....................CACACA-----AAA--AATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002010010
..........................A-----AAA--AATGGAAACGTATACAAAACTCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002020000
.........................CA-----AAA--AATGGAAACGTATACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.............CCC-CAAACACACA-----AAA--AATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
................................AAA--AATGGAAACGTATACA............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
........................ACA-----AAA--AATGGAAACGTATACAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
............................................................................................................................................................................................................................................................................................................................................................CG---------------------GATCG--A----A-GG----------C-----A---ATGTGGCA..................................................................2111.001100000
................................AAA--AATGGAAACGTATACAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...............................................................................................................................................................................................................................................................................................TTGTATGGATTCTAG---TTTGG-CCT.......................................................................................................................................................................2311.001001000
.......................CACA-----AAA--AATGGAAACGTATACA............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
.....................................AATGGAAACGTATACAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100
..........................................AAACGTATACAAAACTCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..CACCTA-GGTGCCC-CAAACACACA-----AA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.................................AA--AATGGAAACGTATACAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
...................................................................................................................................................................................................................................................................................................................................................GGCAAAT-TCG---------------------GATCG--A----A-GG----------C-----..............................................................................2011.001001000
..........................................AAACGTATACAAAACTCCCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2230.331010000
droBip1
-GCACTTA-GGTGCCC-CAAACACACA-----AAA--AATGGAAACGTATACAAAACTCCCGTGAGTATTCGC-------------------------------AATGA------TTATTAATTTCACAATCGCCT-----T----TTGCA----------CACTGTTGCAGA--GCGGTTGCACATTCCCCATTT-------------A---TTGTAGTTGTGTGT----GG------CGTTTGTG--------------A-ATCACCCTCCACATGTA---CAAGTTGTATGGATTCTAG---TTTGG-CC---------T-CC-CCATGTTAACGTGGCAAAT-TCG---------------------CATCA--A----A-GG----------C-----A---ATGTGGCATGCAAC------------------CAGGCGAAAAGCAGGTGTA--------AACATTGGCTGACGCSizeHit CountTotal NormTotal
No Reads
dp5
AGCACCTA-GGTGCCT-C-AACA--CAAGAA-CAA--CATGGAAACGTATAAAAAGCAAGCGTAAGTGCGCCAAAAAA-TC-A---AAGTCCCATCCATCC---AACCA------TAACCCATTTCGCAATTTCCCGAAA-TCTGCACACA----------CACTGCCGCACG--GGTTTTGCAC-------ATTTATATT--------G---TTGTTACTGCCGCT----GTGT-------GTGTA--------------------------------------GCTTGTATGGTTTCTTG---TTTTC-----------------GCCTG-AGACGTGGCAAAAA-G-CCC----------------------AAT--GGAATTG----------C-----A---TTGGGGCATGCAACACACAC----A---CAC-ATGGAG------TGGCCAA--------AAGATTGGCTGACGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................AA-CAA--CATGGAAACGTATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020200000000
.............................AA-CAA--CATGGAAACGTATAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020200000000
.............CCT-C-AACA--CAAGAA-CAA--CATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
..............................A-CAA--CATGGAAACGTATAAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
..................................A--CATGGAAACGTATAAAAAGCAAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000001000
..................................A--CATGGAAACGTATAAAAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000000
.................C-AACA--CAAGAA-CAA--CATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.................................................................GTGCGCCAAAAAA-TC-A---AAGTC......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
..CACCTA-GGTGCCT-C-AACA--CAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
............................GAA-CAA--CATGGAAACGTATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
................................CAA--CATGGAAACGTATAAAAAGCAAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
..............................A-CAA--CATGGAAACGTATAAAAAGCAAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
....................ACA--CAAGAA-CAA--CATGGAAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................GAAACGTATAAAAAGCAAGCCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
............GCCT-C-AACA--CAAGAA-CAA--CATGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.........................CAAGAA-CAA--CATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................AAAA-G-CCC----------------------AAT--GGAATTG----------C-----A---T.........................................................................2111.0010000001000
................................CAA--CATGGAAACGTATAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...ACCTA-GGTGCCT-C-AACA--CAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................CAA--CATGGAAACGTATAAAAAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
.................C-AACA--CAAGAA-CAA--CATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...ACCTA-GGTGCCT-C-AACA--CAAGAA-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...........................AGAA-CAA--CATGGAAACGTATAAAAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..............CT-C-AACA--CAAGAA-CAA--CATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
..........................AAGAA-CAA--CATGGAAACGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
.GCACCTA-GGTGCCT-C-AACA--CAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
....CCTA-GGTGCCT-C-AACA--CAAGAA-CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..........................AAGAA-CAA--CATGGAAACGTATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
droPer2
AGCACCTA-GGTGCCT-C-AACA--CAAGAA-CAA--CATGGAAACGTATAAAAAGCAAGCGTAAGTGCGCCAAAAAA-TC-A---AAGTCCCATCCATCC---AACCA------TAACCCATTTCGCAATTTCCCGAAA-TCTGCACACA----------CACTGCCGCACA--GGTTTTGCAC-------ATTTATATT--------G---TTGTTACTGCCGCT----GTGT-------GTGTG--------------------------------------GCTTGTATGGTTTCTTG---TTTTCGC-----------------C-AGAGACGTGGCAAAAA-G-CCC----------------------AAT--GGAATTG----------C-----A---TTGGGGCATGCAACACACAC----A---CAC-ATGGAG------TGGCCAA--------AAGATTGGCTGACGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............CT-C-AACA--CAAGAA-CAA--CATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.004400000
.................................AA--CATGGAAACGTATAAAAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
.....................CA--CAAGAA-CAA--CATGGAAACGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.....................CA--CAAGAA-CAA--CATGGAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
............................GAA-CAA--CATGGAAACGTATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.................C-AACA--CAAGAA-CAA--CATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...........................AGAA-CAA--CATGGAAACGTATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
droWil2
CGCACTTA-GGTGCCC--AAACA--CAACAATTAA--AATGGAATCGTATACACTAAAACGGTAAGTACTTT--------------AAA----------------TTGC------ATCCGTATTTCGCAATTCGTCACCAAC--ACATATA----------CA-CGCTCCTCT-AGTTGTTGCAA-------TTTC-------------G---TATTAGTTGCCGTT----ATGT-------GTGTCGGTAGTTGTAATGGGAA------------------TTAGTGAAAATCAATTCTTG---TTTTTGTG-C------CA-AC-TCATGGTAACGTGGCAAAAA-T-CAT-------A---------CAAACT---------TGGACACTGCGCCGAGAGACTTTTGGGGCATGCAACAACTACTGGTTCCA---AAAAG------ACTACTGGA--------GAAAATGGCTGACGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................A--AATGGAATCGTATACACTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2014.00440000
.....................................AATGGAATCGTATACACTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................1914.00440000
......................................ATGGAATCGTATACACTAAAACGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300030
.................................AA--AATGGAATCGTATACACTAAAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200020
.............................AATTAA--AATGGAATCGTATACA............................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200110
.................................AA--AATGGAATCGTATACACTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00210010
.................................AA--AATGGAATCGTATACACTAAAACGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2912.00200200
.....................CA--CAACAATTAA--AATGGAATCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00201010
.........................CAACAATTAA--AATGGAATCGTATACACTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000
................................TAA--AATGGAATCGTATACACTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
..................................A--AATGGAATCGTATACACTAAAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100001
.....................CA--CAACAATTAA--AATGGAATCGTATACA............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000
..CACTTA-GGTGCCC--AAACA--CAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
................................TAA--AATGGAATCGTATACACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.............................AATTAA--AATGGAATCGTATACACTAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
..................................A--AATGGAATCGTATACACTAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
..................................A--AATGGAATCGTATACAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
............................CAATTAA--AATGGAATCGTATACACTAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
......................A--CAACAATTAA--AATGGAATCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..............................................................................................................................................................................................................................................................GTAATGGGAA------------------TTAGTGAAAATCAATT.......................................................................................................................................................................................2611.00100100
.............................AATTAA--AATGGAATCGTATACACTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
.......................................TGGAATCGTATACACTAAAACGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................AGAGACTTTTGGGGCATGCA..............................................................2011.00101000
................................................ATACACTAAAACGGTAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.........................CAACAATTAA--AATGGAATCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
.......................................................................................................................................................................................................................................................................................................................................................................................T---------TGGACACTGCGCCGAGAGACTTT.........................................................................2411.00101000
..............................ATTAA--AATGGAATCGTATACACTAA........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
....CTTA-GGTGCCC--AAACA--CAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
...........................ACAATTAA--AATGGAATCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
..............................ATTAA--AATGGAATCGTATACACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.........................CAACAATTAA--AATGGAATCGTATACA............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.........................CAACAATTAA--AATGGAATCGTATAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
..........................AACAATTAA--AATGGAATCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.........................................GAATCGTATACACTAAAACGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50100010
droVir3
AGCACGAACAGTGCCC-C-AACACACAA----AGT--TATGAAAATGTTAACAAAAATATTGTAAGTACCAAT----A-TTGAAC-AACTGCGAACAATGC-A-AGAGT------GCAACAATTTCGCAATGGCGCACAC--------ACACATGCACGCTCACAACCACACAC-GGACTTGTAT-------ATAA-------------ACAGTCATGGCTGCCAAT----GTGT-------TTGTT--------------GC-------------------CTGTT---------TTGTCG---AT--------------------TCATGGTAACGTGGCAGAAA-T-GTT------------------TACCA--C----T-TG----------------C---TTGTGGCATGCAACAGCCCAGTACTCCA---GACAGCGG-----TATCATT--------GAAATTGGCTGATGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....GAACAGTGCCC-C-AACACACAA----A................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.003002100000000000000000000000000000000000000000000000000000000000
....CGAACAGTGCCC-C-AACACAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002001100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GG-----TATCATT--------GAAATTGGC......1812.002000000000000000000000000000002000000000000000000000000000000000
.................................GT--TATGAAAATGTTAACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
AGCACGAACAGTGCCC-C-AACACAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.................C-AACACACAA----AGT--TATGAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
.GCACGAACAGTGCCC-C-AACACACAA----A................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.......................CACAA----AGT--TATGAAAATGTTAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.....GAACAGTGCCC-C-AACACACAA----AG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................GTT--------------GC-------------------CTGTT---------TTGTCG---AT--------------------TCATGGT...................................................................................................................................................2511.001000000000000000000000000000000000010000000000000000000000000000
.....................CACACAA----AGT--TATGAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...........TGCCC-C-AACACACAA----AGT--TATGAAAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
..............CC-C-AACACACAA----AGT--TATGAAAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
....................ACACACAA----AGT--TATGAAAATGTTAACAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
............GCCC-C-AACACACAA----AGT--TATGAAAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................TGC-A-AGAGT------GCAACAATTTCGC.................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000001000000000000000000000000000000000000000
....CGAACAGTGCCC-C-AACACACAA----AGT--............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000100000
.....................CACACAA----AGT--TATGAAAATGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
AGCACGAATAGTGCCCACAAACA--CAA----AGT--TATGAAAATGTTAACAAAATACCTGTAAGTACTTA--AACA-TTGAACCAAG-------TGTA--CAAAGGT------GCAACAATTTCGCAATATTG------C----ACACA----------AATGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....GAATAGTGCCCACAAACA--CAA----A................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
............GCCCACAAACA--CAA----AGT--TATGAAAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..CACGAATAGTGCCCACAAACA--CAA----A................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.............CCCACAAACA--CAA----AGT--TATGAAAATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
.................................GT--TATGAAAATGTTAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501000100
droGri2
AGCACGAC-AGTGCCC-AAAACACACAA----CAAATTATGAAAATGTTAACAAAAACAATGTGAGTACCAAT------------AAAA------GGGTT-CAACACGC------ACACAGATT-----------------T--TCGCACACATGCAA---AATTACTGCATTCCGA----------------TTT--GTTGTCTATAAA---CAGCTGCGGCG-GT--GTGTGT-------GTGTG--------------TAA------------------TTTTTTTG--TCGAT------------------------------TCATGGTAACGTGGCAGAAA-T-GTT-------------------AGCC--A----A-CT----------T-----T---CGGTGGCATGCCACAAAAAA----A---CCAAAAAAGGAATAACAGCTGGAGACGTCCATT-TAAGGGTGATGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................CAA----CAAATTATGAAAATGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
AGCACGAC-AGTGCCC-AAAACACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110

Generated: 05/18/2015 at 11:50 AM